BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044044
         (508 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/488 (51%), Positives = 322/488 (65%), Gaps = 17/488 (3%)

Query: 21  RCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQG 80
           RC  SS F H  +P S         P   S  K+++     DR  L+ FLK  CKS    
Sbjct: 23  RCKLSSLFEHPHRPIS---------PGPISLTKDTVS-NAPDRGQLENFLKSNCKSGH-- 70

Query: 81  DINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
               I  +EA  +F++++ M P+PP +SSFN L G +AK K Y  V+SL+KR++  GL P
Sbjct: 71  ----IKRSEAFSVFNHLIDMQPTPP-ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D  T +ILINC+C + +V  G  VLG +LR   +PN VTFTSL+KGLC  SRI EA  L 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            K       P+V TY TL+NGLC TG+T++A+ L EEM NGNG FGV  KPN V Y TII
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           D LCK+G +DK KELFL+MK   I+PDVV Y+S+I G C+   W  AK LF EM+D+GV 
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+VVTF+V++D LCK GKM++A+ LL+LMI RG +P+T+TYNTLIDG+CL  +ID AR L
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           FVSMES G   D VSYN LIN YCK+  + EA  LY EM+ K I PTV+TYNTL  GLF 
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             +V  A  LF EM+ + +  ++ TYN  +DGLCK+  + EA+ELF  + +  ++ +I  
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQI 485

Query: 501 YNCLIDGL 508
           +NCLIDGL
Sbjct: 486 FNCLIDGL 493



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 186/382 (48%), Gaps = 6/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +  +   L K+   D    LF  +   G+ PD+  +S +I+  C  GR      +
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PN VTF  LI  LC   ++ EA  L          PD FTYNTLI+G C 
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +LF  M +   E       + V+YN +I+G CK G + +AK+L+ +M  + I
Sbjct: 356 EGRIDDARDLFVSMESKGIE------TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V+TY +++ G        +A  LF EM    + P+  T+++++D LCKN  + +A  
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   +      P+   +N LIDG C   KI+ AR+LF  +   G   +V++Y  +I+  C
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  +E A  L+  M  KG  P +VT+NTL  G  +  ++++ ++L  EM     + D  
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589

Query: 465 TYNNFIDGLCKSGFVLEALELF 486
           T +  +D L K     E L L 
Sbjct: 590 TISIVVDLLSKDEKYREYLHLL 611



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 160/319 (50%), Gaps = 6/319 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN+L   L K    +    L K +   G  PD +T++ LI+ FC  GR+     +
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       +AV++  LI G C   R++EA  L+ +       P V TYNTL+ GL R
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A NLF EM   +        P + TYN ++DGLCK   + +A ELF  +++ + 
Sbjct: 426 EGKVRDAWNLFGEMKVHD------LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDF 479

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +  +  +I G C A     A+ LF  +  +G++P+V+T++V++  LCK+G+++ A  
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  +G  PN  T+NTL+ G+C  D++    +L   M       D  + + +++   
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLS 599

Query: 405 KNKDVEEALSLYSEMLSKG 423
           K++   E L L     ++G
Sbjct: 600 KDEKYREYLHLLPTFPAQG 618


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/484 (47%), Positives = 311/484 (64%), Gaps = 14/484 (2%)

Query: 25  SSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINL 84
           SS+ P +   TSS     P  P   +      R  +     L  FL+  CK+        
Sbjct: 23  SSTIPSSIPQTSSTHHPNPILPAAFN------REEISFHHPLSLFLR-NCKTGN------ 69

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           IT  +A   FD M+R HP PP +SSFN L G LAK  HY  + SL+  +  AGL PD++T
Sbjct: 70  ITAIQAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFT 128

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            SIL NC C + RVS     +  ILR  + PN VT+T+LIKGLC E RI EA  LF + +
Sbjct: 129 LSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQ 188

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+  TY TLI GLC+TG+  +AL L +EM N   ++GV CKP  +TY+ IIDGLC
Sbjct: 189 KLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLC 248

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G  D+AKELF +MK + + PDV++Y+++I GFC A  W+++K LF EM+DQGVQPD+V
Sbjct: 249 KVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMV 308

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TFSV++D LCK GK+ +A +LLE+MI RG+ PN  TYN+LIDG+C+   ++ AR+LF+SM
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S G   D +SY TLIN YCK   V+EA++LY+EML  G  P V TY TL  GLF+  +V
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A KLF  M+   V+A++  Y  F+DGLCK+  + EA+ELF  ++   ++LNI +Y+CL
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488

Query: 505 IDGL 508
           IDGL
Sbjct: 489 IDGL 492



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 220/427 (51%), Gaps = 13/427 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLF-----PD 141
           +EA  +F  M ++  +P  V+ +  L   L +  + +  L L K  LN A  +     P 
Sbjct: 178 SEATRLFLRMQKLGCTPNAVT-YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPG 236

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + T+SI+I+  CK+GR      +   +      P+ +++++LI G C   +  ++  LF 
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      +PD+ T++ LI+ LC+ G    A  L E M     + G+V  PN +TYN++ID
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI----QRGIV--PNLITYNSLID 350

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G C  G ++ A+ELFL M  + + PD ++YT++I G+C      EA  L+ EM+  G  P
Sbjct: 351 GFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +V T+  ++  L + GK+  A +L  +M   GV+ N+  Y   +DG C  D +  A +LF
Sbjct: 411 NVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELF 470

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ++S     ++ +Y+ LI+  CK   +E A  L+ ++  +G++P VVTYN +  G  ++
Sbjct: 471 NELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKV 530

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            QV+ A  LF++M  N    D   YN  + G C+   + E ++L   +       N  S 
Sbjct: 531 GQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASC 590

Query: 502 NCLIDGL 508
             ++D L
Sbjct: 591 TIVVDML 597



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 186/371 (50%), Gaps = 6/371 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++I+   L K    D    LF+ + + G+ PD+ ++S LI+ FC  G+      +
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ VTF+ LI  LC E ++ EA  L          P++ TYN+LI+G C 
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  LF  M +   E      P+ ++Y T+I+G CK   V +A  L+ +M     
Sbjct: 355 VGDLNSARELFLSMPSKGLE------PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGK 408

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+V TY ++++G        +AK+LF  M   GV  +   + + +D LCKN  + +A  
Sbjct: 409 SPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAME 468

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   +       N   Y+ LIDG C   K++ A +LF  +   G   DVV+YN +I+ +C
Sbjct: 469 LFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFC 528

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V+ A  L+ +M   G  P ++ YNTL  G  E +++E  +KL  +M +  V+ +  
Sbjct: 529 KVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588

Query: 465 TYNNFIDGLCK 475
           +    +D LCK
Sbjct: 589 SCTIVVDMLCK 599



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 169/357 (47%), Gaps = 30/357 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M +     P V S++ L         +D    LF  +   G+ PD+ T S+
Sbjct: 254 DEAKELFEEM-KAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V+    +L  +++    PN +T+ SLI G C    +  A  LF       
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-------------------------ANGN 242
            EPD  +Y TLING C+T     A+NL+ EM                          +  
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 243 GEFGVV----CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
             FGV+       N+  Y   +DGLCK   + +A ELF ++K  N   ++  Y+ +I G 
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A     A  LF ++  +G+QPDVVT+++++   CK G++D A+ L E M   G  P+ 
Sbjct: 493 CKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             YNTL+ G+C  +K++   KL   M       +  S   +++  CK++  ++ + L
Sbjct: 553 IAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 29/271 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L          ++   LF  + S GL PD  +++ LIN +CK  +V     +
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+   +PN  T+ +L+KGL  + ++ +A  LF   + +    +   Y   ++GLC+
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459

Query: 225 TGHTIVALNLFEEMANGNGEFGV---------VCK--------------------PNTVT 255
                 A+ LF E+ + N +  +         +CK                    P+ VT
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I G CK G VD A  LF KM++    PD++ Y +++ GFC  N   E  +L  +M+
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            + V P+  + ++++D LCK+ K  K   LL
Sbjct: 580 QKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 6/169 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           + I    L KN      + LF  L S     +I  +S LI+  CK G++   + +  ++ 
Sbjct: 450 YGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLS 509

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           +    P+ VT+  +I G C   ++  A  LF K     C PD+  YNTL+ G C      
Sbjct: 510 QEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLE 569

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
             + L  +M   +        PN  +   ++D LCK+    K  +L  K
Sbjct: 570 EVIKLLHKMVQKD------VSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NI+     K    D    LF+++   G  PDI  ++ L+  FC+  ++     +
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           L ++++   +PNA + T ++  LC + +  +   L  K  V
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPV 615


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/440 (47%), Positives = 290/440 (65%), Gaps = 7/440 (1%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
           F    CK+        +T   AL  F  M+R  P+P  +SSFN L   LAK KHY  V S
Sbjct: 38  FFLRHCKTGN------VTATHALHFFHLMMRSTPTPS-LSSFNHLLSGLAKIKHYSQVFS 90

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L+ ++  +GL  D  T +IL+NC C + R+  GF     ILR  ++PN VT+ +LIKGLC
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            E RI EA  LF + +   C PDV TY TLI GLC TG+  +AL L +EM N    + + 
Sbjct: 151 MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN 210

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKPN +TYN I+DGLCK G  D+AK+LF +MK + + P +++Y S+I GFC A  W E+K
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESK 270

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           RL  EM+DQG+QPD+VTF+V++D LCK GK+ +A +LL +MI  G+ P+  TYN+LI+G+
Sbjct: 271 RLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C+   ++ AR+LFVSM S GC  DV+SYN LIN Y K   VEEA+ LY+EML  G +P V
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TY++L  G+F   +V+ A KLF  M+ + +A ++YTY  F+DGLCK+  + EA++LF  
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           ++ S ++L I + NCLIDGL
Sbjct: 451 LKSSNFKLEIENLNCLIDGL 470



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 241/542 (44%), Gaps = 51/542 (9%)

Query: 4   VSSTRSFHFTSISISALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLT--VK 61
           V++T + HF  + + +      SSF H     + I      +      L   +RL+    
Sbjct: 48  VTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVF-----SLYNQMRLSGLSS 102

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           DR +L   L   C        N+    E    F  +LR   SP  V+ +N L   L    
Sbjct: 103 DRCTLNILLNCLC--------NVNRLREGFAAFAGILRRGYSPNIVT-YNTLIKGLCMEH 153

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF------TP 175
                  LF R+   G  PD+ T+  LI   C  G ++    +   +L           P
Sbjct: 154 RISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKP 213

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N +T+  ++ GLC   R  EA  LF + +     P + +YN+LI+G C  G    +  L 
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLL 273

Query: 236 EEMANG---------NGEFGVVCK--------------------PNTVTYNTIIDGLCKE 266
           +EM +          N     +CK                    P+ VTYN++I+G C  
Sbjct: 274 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 333

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++ A+ELF+ M  +   PDV++Y  +I G+       EA +L+ EM+  G +P+V+T+
Sbjct: 334 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 393

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++  +   GK+D A +L  +M   G+  N+YTY   +DG C  D +  A KLF  ++S
Sbjct: 394 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +    ++ + N LI+  CK   +E A  L+ ++ ++G +P VVTY  +  G     QV++
Sbjct: 454 SNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK 513

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  L  +M  N    D  TYN  + G  +S  + E ++L   +       + ++ + ++D
Sbjct: 514 ANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573

Query: 507 GL 508
            L
Sbjct: 574 ML 575



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 37/370 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNIL---FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           +EA  +F+ M +     P + S+N L   F C  K   ++    L   +   GL PD+ T
Sbjct: 232 DEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGK---WEESKRLLDEMLDQGLQPDMVT 287

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            ++LI+  CK G+V     +LG ++ S   P+ VT+ SLI+G C    +  A  LF    
Sbjct: 288 FNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP 347

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA------------------------- 239
              CEPDV +YN LING  +T     A+ L+ EM                          
Sbjct: 348 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 407

Query: 240 NGNGEFGVV----CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           +    F V+       N+ TY   +DGLCK   + +A +LF ++K  N   ++     +I
Sbjct: 408 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 467

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G C A     A  LF ++ ++G +P+VVT+++++   C+ G++DKA+ L++ M   G  
Sbjct: 468 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCT 527

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+  TYNTL+ G+  ++K++   +L   M       D ++ + +++   K++  +E L L
Sbjct: 528 PDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 587

Query: 416 YSEM-LSKGI 424
                + KG+
Sbjct: 588 LPRFPIQKGV 597


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/446 (47%), Positives = 296/446 (66%), Gaps = 20/446 (4%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L++FL+  CKS   GD  L   +EAL  F+ M+ M  +P  +S FN LFG LAK K Y  
Sbjct: 73  LEQFLEINCKS---GDFTL---HEALHFFNQMIHMQTTPA-LSRFNNLFGALAKKKQYLH 125

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           V+S+  R+NS GL  +  + +IL+NC C + RV  GFVV G ILR  + PN  TFT+L+K
Sbjct: 126 VISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVK 185

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           GLC E +I EA  +F    VF C P   T   LI+GLCRTG+T  AL L E M NGN +F
Sbjct: 186 GLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDF 245

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           G+ CKP  V+Y+ IID LCK+G V++AKE F++MK++ I P+VVTYTS++ G C A++W 
Sbjct: 246 GINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWE 305

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EAKRLFIEM+D G+ PDVVTFSV++  LCK GK+ +AS L +LM+ R V P+T TYN LI
Sbjct: 306 EAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILI 365

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +GYCL   +D  +K+F+SM +  C HD  SY+ L+  YCK+ +V  A+ LY EM+ +GI+
Sbjct: 366 EGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQ 425

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT---YNNFIDGLCKSGFVLEA 482
           PTV+TY+          +V  A KLF E++   +  D+ +   YN ++DGLCK+G V EA
Sbjct: 426 PTVITYS----------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEA 475

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           L++F  + + K+  N+  +N LI+G+
Sbjct: 476 LDVFYGLENCKFASNVAIFNSLINGM 501



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 184/380 (48%), Gaps = 44/380 (11%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P + ++S +I+  CK G V         +      PN VT+TSL+ GLC+ S   EA  L
Sbjct: 251 PTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRL 310

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F +       PDV T++ LI  LC+ G    A  LF+ M     E      P+T TYN +
Sbjct: 311 FIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVE------PSTRTYNIL 364

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+G C  G VD+ K++FL M ++    D  +Y+ +++ +C  ++ + A  L+ EMMD+G+
Sbjct: 365 IEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGI 424

Query: 320 QPDVVTFS----------------------------VIMDELCKNGKMDKASRLLELMIW 351
           QP V+T+S                            V +D LCKNG + +A     L ++
Sbjct: 425 QPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEA-----LDVF 479

Query: 352 RGVN-----PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
            G+       N   +N+LI+G C ++K++ A +LF  + +     DVV+Y  +I   CK 
Sbjct: 480 YGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKV 539

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              ++A  L+ EM  KG  P VVT+NTL  GL    +  + ++L  +M    ++ D  T 
Sbjct: 540 GQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTL 599

Query: 467 NNFIDGLCKSGFVLEALELF 486
              +D L K     E L L 
Sbjct: 600 LIVMDILLKDENYHECLNLL 619



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 22/333 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L     ++    LF  +   GL PD+ T S+LI   CK+G+V     +
Sbjct: 286 PNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGL 345

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+  T+  LI+G C    + E   +F       C+ D  +Y+ L+   C+
Sbjct: 346 FDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCK 405

Query: 225 TGHTIVALNLFEEM---------------ANGNGEFGVVCKPNTV-------TYNTIIDG 262
                 A+ L+ EM                +    FG +   + V        YN  +DG
Sbjct: 406 DSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDG 465

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK G V +A ++F  +++     +V  + S+I G C +     A  LF  + ++ +QPD
Sbjct: 466 LCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPD 525

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           VVT+++++  LCK G+  KA  L   M  +G  PN  T+NTL+ G CL  +     +L  
Sbjct: 526 VVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            M +     D  +   +++   K+++  E L+L
Sbjct: 586 KMAARKLSPDASTLLIVMDILLKDENYHECLNL 618



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 37/277 (13%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M++ +  P    ++NIL          D    +F  + +     D  ++SIL
Sbjct: 341 EASGLFDLMVQRYVEPS-TRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSIL 399

Query: 149 INCFCKMGRVSHGFVVLGR-ILRSCFTPNAVTFTSL------------------------ 183
           +  +CK   V HG ++L R ++     P  +T++ +                        
Sbjct: 400 MKAYCKDSEV-HGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSI 458

Query: 184 ----IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
               + GLC    + EA  +F          +V  +N+LING+CR+    +A  LF  + 
Sbjct: 459 YNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLC 518

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
           N         +P+ VTY  +I GLCK G   KA +LFL+M+++   P+VVT+ +++RG C
Sbjct: 519 NE------ALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLC 572

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             ++  +   L  +M  + + PD  T  ++MD L K+
Sbjct: 573 LNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKD 609


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/498 (44%), Positives = 310/498 (62%), Gaps = 20/498 (4%)

Query: 18  SALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKD-------RASLKKFL 70
           S ++ N SSS   T  PT  I  + P + +      +SL ++ ++       +  L  FL
Sbjct: 13  SIVKPNLSSSL-FTHSPT--IPSSNPHFSSAVHH--KSLNVSPQNFNTPISFQQQLSMFL 67

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
              CK+        IT  +A   F  M+  +P+PP +SSF  L   LAK KHY  V  L+
Sbjct: 68  -HNCKTGN------ITATQAFQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLY 119

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
            ++  +G+ PD  T +IL+NC C + RV  G  V+  ILR  + P+ VT+T+LIKGLC E
Sbjct: 120 NQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCME 179

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            RI +AA LFT+ +   C P+  TY TL+ GLCRTG+  +AL L +EM N +  +G+  K
Sbjct: 180 HRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK 239

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P  ++Y+ IID LCK+   D+A++LF +MK + + P V++YTS+I GFC    W EAKRL
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRL 299

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM++QGVQP+VVTF+V++D LCK GK+ +A  LLE+MI RG+ PN  TYN+LI+G+CL
Sbjct: 300 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 359

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
              ++ AR+LFVSM S GC  DV+ Y  LIN YCK   VEEA+ LY+ ML  G +P V T
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y  L  GLF+  +V  A KLF  M+   +  D Y Y  F++GLCK+G + EA+ELF  ++
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479

Query: 491 DSKYELNIVSYNCLIDGL 508
               +L+I  +NCLIDGL
Sbjct: 480 SYNIKLDIECFNCLIDGL 497



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 216/423 (51%), Gaps = 15/423 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLF-----PD 141
           ++A  +F  M ++  +P  ++ +  L   L +  +    L L +  LN + L+     P 
Sbjct: 183 SKAALLFTRMQKLGCTPNAIT-YGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + ++SI+I+  CK  R      +   +     TP  +++TSLI G C   +  EA  LF 
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      +P+V T+N LI+ LC+ G  I A +L E M     + G+V  PN +TYN++I+
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI----QRGIV--PNLLTYNSLIE 355

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G C  G ++ A+ELF+ M  +   PDV+ YT +I G+C  +   EA +L+  M+  G +P
Sbjct: 356 GFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           DV T+  ++  L + GK+  A +L  +M   G+  + Y Y   ++G C    +  A +LF
Sbjct: 416 DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF 475

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ++S     D+  +N LI+  CK   +E A  L+ ++  + ++P VVTYN +       
Sbjct: 476 NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRG 535

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI--RDSKYELNIV 499
            QV +A  LF +M +N    D  TY   I G  +S  + + +EL   +  RD   ++NI+
Sbjct: 536 GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 595

Query: 500 SYN 502
            +N
Sbjct: 596 RHN 598


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/498 (43%), Positives = 307/498 (61%), Gaps = 28/498 (5%)

Query: 18  SALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKD-------RASLKKFL 70
           S ++ N SSS   T  PT  I  + P + +      +SL ++ ++       +  L  FL
Sbjct: 13  SIVKPNLSSSL-FTHSPT--IPSSNPHFSSAVHH--KSLNVSPQNFNTPISFQQQLSMFL 67

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
              CK+        IT  +A   F  M+  +P+PP +SSF  L   LAK KHY  V  L+
Sbjct: 68  -HNCKTGN------ITAIQAFQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLY 119

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
            ++  +G+ PD  T +IL+NC C + RV  G  V+  ILR  + P+ VT+T+LIKGLC E
Sbjct: 120 NQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCME 179

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            RI +AA LFT+ +   C P+  TY TL+ GLCRTG+  +AL L +EM N +  +G+  K
Sbjct: 180 HRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFK 239

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P  ++Y+ IID LCK+   D+A++LF +MK + + P V++YTS++        W EAKRL
Sbjct: 240 PVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRL 291

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM++QGVQP+VVTF+V++D LCK GK+ +A  LLE+MI RG+ PN  TYN+LI+G+CL
Sbjct: 292 FNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCL 351

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
              ++ AR+LFVSM S GC  DV+ Y  LIN YCK   VEEA+ LY+ ML  G +P V T
Sbjct: 352 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y  L  GLF+  +V  A KLF  M+   +  D Y Y  F++GLCK+G + EA+ELF  ++
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471

Query: 491 DSKYELNIVSYNCLIDGL 508
               +L+I  +NCLIDGL
Sbjct: 472 SYNIKLDIECFNCLIDGL 489


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  359 bits (921), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/426 (43%), Positives = 265/426 (62%), Gaps = 7/426 (1%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N I+ ++AL  F  MLRM+P P  V  F    G +AK K Y TV+SL  +++  G+  ++
Sbjct: 69  NSISIDDALASFYRMLRMNPRPS-VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNV 127

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+ +ILINC C++  V     VLG++ +    P+A+TF +LI G C E  I EA  LF +
Sbjct: 128 YSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNE 187

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 +PDV +Y+T+INGLC++G+T +AL L  +M          CKPN V Y TIID 
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG------CKPNLVAYTTIIDS 241

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+  V+ A +L  +M D  I PDVVTY++++ GFC     NEA  LF EM+ + V P+
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            VTF++++D LCK G + +A  + E M  +G  PN YTYN L+DGYCL +++D A+K+  
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   GC   V SYN LIN YCK + ++EA SL  EM  K + P  VTY+TL  GL ++ 
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + + AL LF EM  + +  D  TY+  +DGLCK G + EAL+L +++++SK E +IV YN
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYN 481

Query: 503 CLIDGL 508
            LI+G+
Sbjct: 482 ILIEGM 487



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 223/418 (53%), Gaps = 7/418 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +   M ++   P  ++ FN L             + LF  +   G  PD+ ++S +I
Sbjct: 146 AISVLGKMFKLGIQPDAIT-FNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVI 204

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CK G  S    +L ++      PN V +T++I  LC ++ + +A  L ++       
Sbjct: 205 NGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIP 264

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV TY+T+++G C  GH   A  LF EM   N        PNTVT+  ++DGLCKEG V
Sbjct: 265 PDVVTYSTILHGFCSLGHLNEATILFNEMVGRN------VMPNTVTFTILVDGLCKEGMV 318

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A+ +F  M  +   P+  TY +++ G+C  N  +EA+++   M+D+G  P V +++++
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  CK  ++D+A  LL  M  + + P+T TY+TL+ G C   +   A  LF  M S+G 
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D+++Y+TL++  CK+  ++EAL L   M    I+P +V YN L  G+F   ++E A +
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKE 498

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LF ++  + +     TY   I GL K G   EA ELFR + D  +  N  SYN +I G
Sbjct: 499 LFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  +   L K+   +  + L   +   G+ PD+ T+S +++ FC +G ++   ++
Sbjct: 230 PNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL 289

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PN VTFT L+ GLC E  + EA  +F        EP+ +TYN L++G C 
Sbjct: 290 FNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCL 349

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + + M +        C P   +YN +I+G CK   +D+AK L ++M ++ +
Sbjct: 350 NNQMDEAQKVLDIMVDKG------CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++++G C      EA  LF EM   G+ PD++T+S ++D LCK+G +D+A +
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M    + P+   YN LI+G  +  K++ A++LF  + ++G    + +Y  +I    
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EA  L+ +M   G  P   +YN +  G  +      A++L DEM     +AD+ 
Sbjct: 524 KEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSS 583

Query: 465 TYNNFID 471
           T+   +D
Sbjct: 584 TFQMLLD 590


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  353 bits (907), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 184/427 (43%), Positives = 258/427 (60%), Gaps = 7/427 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N  T ++AL  F+ ML MHP PP    FN L   +AK K Y TV SL  +++S G+ PD
Sbjct: 43  LNFNTLDDALSSFNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPD 101

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +YT +ILIN FC + R    F VL +IL+    P+  TFT+LI+GLC E +I +A  LF 
Sbjct: 102 VYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFD 161

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K      +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V Y +IID
Sbjct: 162 KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIID 215

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCK+  V +A  LF KM  + I+PD+ TYTS+I   C   +W     L  +M++  + P
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           DVV FS ++D LCK GK+ +A  ++++MI RGV PN  TYN L+DG+CL  ++D A K+F
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +M  NG   +V+SYNTLIN YCK + +++A  L+ EM  K + P  VTYNTL  GL  +
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ A+ LF EM  +    D  TY   +D LCK   + EA+ L + I  S  + +I  Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 502 NCLIDGL 508
             +IDG+
Sbjct: 456 TIVIDGM 462



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 198/370 (53%), Gaps = 6/370 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L K++      +LF ++   G+ PDI+T++ LI+  C +    H   +
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ S   P+ V F++++  LC E +I EA  +     +   EP+V TYN L++G C 
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M + NG       PN ++YNT+I+G CK   +DKA  LF +M  + +
Sbjct: 325 QSEMDEAVKVFDTMVH-NGY-----APNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 378

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY +++ G C+     +A  LF EM+  G  PD+ T+ +++D LCK   +D+A  
Sbjct: 379 IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 438

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    ++P+   Y  +IDG C   +++ AR +F ++ S G   +V +Y  +IN  C
Sbjct: 439 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 498

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   ++EA  L+ EM   G  P   TYNT+  GL +  +  RA++L  EM     +AD  
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 558

Query: 465 TYNNFIDGLC 474
           T    ++ LC
Sbjct: 559 TTTLLVEMLC 568



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 242/543 (44%), Gaps = 49/543 (9%)

Query: 6   STRSFHFTSISISALRCNFSS--SFPHTRKPTSSISENE--------PSYPTTTSKLKES 55
           S   FH  S++ + L    SS     H   P S++  N           YPT  S   + 
Sbjct: 34  SHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM 93

Query: 56  LRLTVK-DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
               +  D  +L   +   C        +L  P  A  +   +L++   P   +   ++ 
Sbjct: 94  DSFGIPPDVYTLNILINSFC--------HLNRPGFAFSVLAKILKLGLQPDTATFTTLIR 145

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           G   + K  D  L LF ++   G  P++ T+  LIN  CK+G  +    +L  + +    
Sbjct: 146 GLCVEGKIGDA-LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ 204

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+ V +TS+I  LC + ++ EA  LF+K       PD+FTY +LI+ LC          L
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264

Query: 235 FEEMANGNGEFGVV---------CK--------------------PNTVTYNTIIDGLCK 265
             +M N      VV         CK                    PN VTYN ++DG C 
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  +D+A ++F  M      P+V++Y ++I G+C     ++A  LF EM  + + P+ VT
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ +M  LC  G++  A  L   M+  G  P+  TY  L+D  C    +D A  L  ++E
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +    D+  Y  +I+  C+  ++E A  ++S + SKG++P V TY  +  GL     ++
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A KLF EM  N  + D  TYN    GL ++   L A++L + +    +  ++ +   L+
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564

Query: 506 DGL 508
           + L
Sbjct: 565 EML 567



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 172/368 (46%), Gaps = 42/368 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M+    SP  + ++  L   L     +  V +L  ++ ++ + PD+   S +
Sbjct: 225 EAFNLFSKMVGQGISPD-IFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 283

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G+++    V+  ++     PN VT+ +L+ G C +S + EA  +F        
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI--------- 259
            P+V +YNTLING C+      A  LFEEM            PNTVTYNT+         
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKE------LIPNTVTYNTLMHGLCHVGR 397

Query: 260 --------------------------IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
                                     +D LCK+  +D+A  L   ++  N++PD+  YT 
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           VI G C A +   A+ +F  +  +G++P+V T++++++ LC+ G +D+A++L   M   G
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            +P+  TYNT+  G     +   A +L   M + G   DV +   L+   C +K  +   
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577

Query: 414 SLYSEMLS 421
            + SE + 
Sbjct: 578 QILSEFVQ 585


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  353 bits (907), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 181/431 (41%), Positives = 262/431 (60%), Gaps = 7/431 (1%)

Query: 78  GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           G    N I+ ++AL  F  M+RM+P P  V  F    G +AK K Y + +SL  +++  G
Sbjct: 68  GSNTSNDISIDDALTSFYRMVRMNPRPS-VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFG 126

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           +  ++Y+ ++LINC C++  V     V+G++ +    P+A+TF +LI GLC E +I EA 
Sbjct: 127 VTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            LF +      EP+V +YNT+INGLC+ G+TI+A+ +F +M    G      KPN VTYN
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG------KPNVVTYN 240

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           TIID LCK+  V++A E   +M D  I PDVVTY +++ GFC     NEA RLF EM+ +
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR 300

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            V PD VTF++++D LCK G + +A  + E M  +G  PN YTYN L+DGYCL +++D A
Sbjct: 301 NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEA 360

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            K+   M   GC  ++ SYN LIN YCK+K + EA  L SEM  K + P  VTY+TL  G
Sbjct: 361 IKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQG 420

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L ++ +   AL LF EM  + +  D   Y+  +DG CK G + EAL+L + + + + + N
Sbjct: 421 LCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPN 480

Query: 498 IVSYNCLIDGL 508
           I+ Y  LI G+
Sbjct: 481 IILYTILIRGM 491



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 228/418 (54%), Gaps = 7/418 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +   M ++   P  ++ FN L   L         + LF  +  +G  P++ +++ +I
Sbjct: 150 AVSVMGKMFKLGIQPDAIT-FNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVI 208

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CK G       V  ++ ++   PN VT+ ++I  LC +  + EA    ++       
Sbjct: 209 NGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIP 268

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV TYNT+++G C  G    A  LF+EM   N        P+TVT+N ++DGLCKEG V
Sbjct: 269 PDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN------VMPDTVTFNILVDGLCKEGMV 322

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A+ +   M ++   P+  TY +++ G+C  N  +EA ++   M+ +G  P++ +++++
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNIL 382

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  CK+ +M++A RLL  M  + + P+T TY+TL+ G C   +   A  LF  M S+G 
Sbjct: 383 INGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D+++Y+ L++ +CK+  ++EAL L  EM  + IKP ++ Y  L  G+F   ++E A +
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKE 502

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LF ++  + +  D +TYN  I GL K G   EA E FR + D  +  +  SYN +I G
Sbjct: 503 LFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQG 560



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K++  +  +     +   G+ PD+ T++ +++ FC +G+++    +
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ VTF  L+ GLC E  + EA  +         EP+ +TYN L++G C 
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCL 353

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +   M       G  C PN  +YN +I+G CK   +++AK L  +M ++N+
Sbjct: 354 HNQMDEAIKVLGIM------IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++++G C      EA  LF EM   G+ PD++ +S+++D  CK+G +D+A +
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  R + PN   Y  LI G  +  K++ A++LF  + ++G   D+ +YN +I    
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EA   + +M   G  P   +YN +  G  +      A++L DEM     +AD+ 
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSS 587

Query: 465 TYNNFID 471
           T+   +D
Sbjct: 588 TFQMLLD 594



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F+ M+      P V S+N +   L KN +    + +F+++      P++ T++ +
Sbjct: 184 EAVGLFNEMV-WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTI 242

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK   V+     L  ++     P+ VT+ +++ G C+  ++ EA  LF +      
Sbjct: 243 IDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNV 302

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+N L++GLC+ G    A  + E M     E      PN  TYN ++DG C    
Sbjct: 303 MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE------PNAYTYNALMDGYCLHNQ 356

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A ++   M  +   P++ +Y  +I G+C +   NEAKRL  EM ++ + PD VT+S 
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M  LC+ G+  +A  L + M   G+ P+   Y+ L+DG+C    +D A KL   M    
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +++ Y  LI        +E A  L+S++ + GI+P + TYN +  GL +    + A 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           + F +M  +    D+ +YN  I G  ++     A++L   +   ++  +  ++  L+D
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  350 bits (897), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 172/421 (40%), Positives = 257/421 (61%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F++ML   P P  +    +L   +   ++YD V+SL K++   GL P+IYT SI
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +NCFC++ RV  GF VL ++++    P  VTFT+LI GLC      +A  LF       
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PDV+TYNT+INGLC+ G T  A  L ++M          C+PN VTY+T+ID LC++ 
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG------CQPNMVTYSTLIDSLCRDR 247

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ++F  MK + I+PD+ TYTS+I+G C  + W EA  L  EM    + PD+VTF+
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D  CK GK+ +A  +L+ M   GV PN  TY++L+ GY L   +  ARKLF  M + 
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  ++ SYN LIN YCK K ++EA+ L++EM+ +G+ P  V+YNTL  G  ++ ++  A
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF  M  N    D +TY+  +DG CK G++ +A  LFRA++ +  + N+V Y  L+  
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487

Query: 508 L 508
           +
Sbjct: 488 M 488



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 223/404 (55%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L K   +   + LF  + + G  PD+YT++ +IN  CK+G  +    +
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL 220

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  +   PN VT+++LI  LC +  + EA  +F+  +     PD+FTY +LI GLC+
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L  EM + N        P+ VT+N ++D  CKEG V +A  +   M +  +
Sbjct: 281 FSRWKEASALLNEMTSLN------IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY+S++ G+    D  EA++LF  M+ +G +P++ +++++++  CK  ++D+A +
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI +G+ PN  +YNTLI G+C   K+  A+ LF +M +NG + D+ +Y+ L++ +C
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L+  M S  +KP +V Y  L   + +    + A KLF E+    +     
Sbjct: 455 KQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQ 514

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   I+GLCK G + EALE FR +       + +SYN +I GL
Sbjct: 515 LYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 189/404 (46%), Gaps = 30/404 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +FD M+      P V ++N +   L K         L K++  AG  P++ T+S L
Sbjct: 181 QAVELFDDMVA-KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTL 239

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C+   V+    +   +     +P+  T+TSLI+GLC  SR  EA+AL  +      
Sbjct: 240 IDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNI 299

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-------------------- 248
            PD+ T+N L++  C+ G    AL + + M     E  VV                    
Sbjct: 300 MPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARK 359

Query: 249 ---------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                    CKPN  +YN +I+G CK   +D+A +LF +M  + + P+ V+Y ++I GFC
Sbjct: 360 LFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFC 419

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 EA+ LF  M   G  PD+ T+S+++D  CK G + KA RL   M    + PN  
Sbjct: 420 QLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 479

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            Y  L+   C +     ARKLF  +   G    V  Y T+IN  CK   ++EAL  +  M
Sbjct: 480 MYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNM 539

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            + G  P  ++YN +  GL +     RAL L  EMR     AD 
Sbjct: 540 EADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 170/353 (48%), Gaps = 37/353 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL IF YM +     P + ++  L   L K   +    +L   + S  + PDI T ++
Sbjct: 250 NEALDIFSYM-KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNV 308

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G+VS    VL  +      PN VT++SL+ G    + ++EA  LF       
Sbjct: 309 LVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKG 368

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------------------GN 242
           C+P++F+YN LING C+      A+ LF EM +                           
Sbjct: 369 CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428

Query: 243 GEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
             F  +C     P+  TY+ ++DG CK+G++ KA  LF  M+   + P++V YT ++   
Sbjct: 429 DLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAM 488

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C + +  +A++LF E+  QG+QP V  ++ I++ LCK G +D+A      M   G  P+ 
Sbjct: 489 CKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDE 548

Query: 359 YTYNTLIDGYCLTDKIDHARKLFV--SMESNGCMHDVVSYNTLINWYCKNKDV 409
            +YN +I G  L    D +R L +   M   G + DV      ++  C+ K V
Sbjct: 549 ISYNVIIRG--LLQHKDESRALLLVGEMRDRGFIADV---RPCLSEVCQGKKV 596


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 177/423 (41%), Positives = 260/423 (61%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T +EAL  F+ ML   P PP    FN L   +AK KH+ T+LSL ++++S G+ PD+YT 
Sbjct: 50  TLDEALSTFNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +I+IN  C + RV   F  L +IL+    P+A TFT+LI+GLC E +I EA  LF K   
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+PN V ++T+ID LCK
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVVVFSTLIDSLCK 222

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  +F +M  + I+P++VTY S+I G C   +W     L  EM+D  + PDV T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            + ++D LCK G + +A  ++++MI RGV PN  TYN L+DG+CL +++D A K+F +M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
              C+ +V+SYNTLIN YCK + V++A+ L+ EM  + + P  VTYNTL  GL  + +++
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM       D  TY    D LCK+  + +A+ L +AI  S ++ +I  Y  ++
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 506 DGL 508
           DG+
Sbjct: 463 DGM 465



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 192/374 (51%), Gaps = 6/374 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  F+ L   L K++      ++F  + + G+ P+I T++ LI+  CK+    H   +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++ S   P+  T  +++  LC E  + EA  +         EP+V TYN L++G C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                VA+ +F+ M + +      C  N ++YNT+I+G CK   VDKA  LF +M  + +
Sbjct: 328 RNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY ++I G C+     +A  LF EM+ +G  PD+VT+  + D LCKN  +DKA  
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +     +P+   Y T++DG C   +++ AR LF ++ S G   +V +YN +I+  C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA  L+SEM   G  P   TYN +  G    ++  R ++L +EM     + D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 465 TYNNFIDGLCKSGF 478
           T    +  L   G 
Sbjct: 562 TTTLLVGMLSDDGL 575



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 210/425 (49%), Gaps = 12/425 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +FD M+      P V ++  L   L K  +    + L + +      P++   S L
Sbjct: 158 EALHLFDKMIG-EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK  +V+  F +   ++    +PN VT+ SLI GLC          L  +      
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFT NT+++ LC+ G    A ++ + M +   E      PN VTYN ++DG C    
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE------PNVVTYNALMDGHCLRNE 330

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A ++F  M  ++   +V++Y ++I G+C     ++A  LF EM  Q + P+ VT++ 
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC  G++  A  L   M+ RG  P+  TY TL D  C    +D A  L  ++E + 
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+  Y T+++  C+  ++E+A  L+S + SKG++P V TYN +  GL +   +  A 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI--- 505
           KLF EM +N  + +  TYN    G  ++   L  +EL   +    + +++ +   L+   
Sbjct: 511 KLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570

Query: 506 --DGL 508
             DGL
Sbjct: 571 SDDGL 575



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +FD M+        V S+N L     K +  D  + LF+ ++   L P+  T++ LI
Sbjct: 334 AVKVFDTMVH-KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  C +GR+     +   ++     P+ VT+ +L   LC    + +A AL         +
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD+  Y T+++G+CR G    A +LF  +++         +PN  TYN +I GLCK+G +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLL 506

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A +LF +M     +P+  TY  + RGF   N+      L  EM+ +G   DV T +++
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566

Query: 330 MDELCKNGKMDKASRLL 346
           +  L  +G      ++L
Sbjct: 567 VGMLSDDGLDQSVKQIL 583



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 96/207 (46%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  +EA   F  M+ +   P  V F+ ++  + K         L   M   G+ P+ YT 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             +I+  C  +++D A      +   G   D  ++ TLI   C    + EAL L+ +M+ 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G +P VVTY TL  GL ++     A++L   M + +   +   ++  ID LCK   V E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  +F  +       NIV+YN LI GL
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGL 255



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 35/149 (23%)

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           S+NT  +       ++EALS ++ ML K   P+ V +N L   + +       L L  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 455 RRNHVAADTY-----------------------------------TYNNFIDGLCKSGFV 479
               +  D Y                                   T+   I GLC  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EAL LF  +    ++ N+V+Y  LI+GL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGL 185


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  348 bits (893), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 177/423 (41%), Positives = 260/423 (61%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T +EAL  F+ ML   P PP    FN L   +AK KH+ T+LSL ++++S G+ PD+YT 
Sbjct: 50  TLDEALSTFNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +I+IN  C + RV   F  L +IL+    P+A TFT+LI+GLC E +I EA  LF K   
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+PN V ++T+ID LCK
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVVVFSTLIDSLCK 222

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  +F +M  + I+P++VTY S+I G C   +W     L  EM+D  + PDV T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            + ++D LCK G + +A  ++++MI RGV PN  TYN L+DG+CL +++D A K+F +M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
              C+ +V+SYNTLIN YCK + V++A+ L+ EM  + + P  VTYNTL  GL  + +++
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM       D  TY    D LCK+  + +A+ L +AI  S ++ +I  Y  ++
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 506 DGL 508
           DG+
Sbjct: 463 DGM 465



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 192/374 (51%), Gaps = 6/374 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  F+ L   L K++      ++F  + + G+ P+I T++ LI+  CK+    H   +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++ S   P+  T  +++  LC E  + EA  +         EP+V TYN L++G C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                VA+ +F+ M + +      C  N ++YNT+I+G CK   VDKA  LF +M  + +
Sbjct: 328 RNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY ++I G C+     +A  LF EM+ +G  PD+VT+  + D LCKN  +DKA  
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +     +P+   Y T++DG C   +++ AR LF ++ S G   +V +YN +I+  C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA  L+SEM   G  P   TYN +  G    ++  R ++L +EM     + D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 465 TYNNFIDGLCKSGF 478
           T    +  L   G 
Sbjct: 562 TTTLLVGMLSDDGL 575



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 210/425 (49%), Gaps = 12/425 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +FD M+      P V ++  L   L K  +    + L + +      P++   S L
Sbjct: 158 EALHLFDKMIG-EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK  +V+  F +   ++    +PN VT+ SLI GLC          L  +      
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFT NT+++ LC+ G    A ++ + M +   E      PN VTYN ++DG C    
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE------PNVVTYNALMDGHCLRNE 330

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A ++F  M  ++   +V++Y ++I G+C     ++A  LF EM  Q + P+ VT++ 
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC  G++  A  L   M+ RG  P+  TY TL D  C    +D A  L  ++E + 
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+  Y T+++  C+  ++E+A  L+S + SKG++P V TYN +  GL +   +  A 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI--- 505
           KLF EM +N  + +  TYN    G  ++   L  +EL   +    + +++ +   L+   
Sbjct: 511 KLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570

Query: 506 --DGL 508
             DGL
Sbjct: 571 SDDGL 575



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +FD M+        V S+N L     K +  D  + LF+ ++   L P+  T++ LI
Sbjct: 334 AVKVFDTMVH-KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  C +GR+     +   ++     P+ VT+ +L   LC    + +A AL         +
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD+  Y T+++G+CR G    A +LF  +++         +PN  TYN +I GLCK+G +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLL 506

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A +LF +M     +P+  TY  + RGF   N+      L  EM+ +G   DV T +++
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566

Query: 330 MDELCKNGKMDKASRLL 346
           +  L  +G      ++L
Sbjct: 567 VGMLSDDGLDQSVKQIL 583



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 96/207 (46%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  +EA   F  M+ +   P  V F+ ++  + K         L   M   G+ P+ YT 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             +I+  C  +++D A      +   G   D  ++ TLI   C    + EAL L+ +M+ 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G +P VVTY TL  GL ++     A++L   M + +   +   ++  ID LCK   V E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  +F  +       NIV+YN LI GL
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGL 255



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 35/149 (23%)

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           S+NT  +       ++EALS ++ ML K   P+ V +N L   + +       L L  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 455 RRNHVAADTY-----------------------------------TYNNFIDGLCKSGFV 479
               +  D Y                                   T+   I GLC  G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EAL LF  +    ++ N+V+Y  LI+GL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGL 185


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  348 bits (892), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 179/424 (42%), Positives = 263/424 (62%), Gaps = 7/424 (1%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I+ ++AL  F  M+RM+P P  V+ F    G  AK K Y TV+SL  +++  G+  ++Y+
Sbjct: 67  ISIDDALASFYRMVRMNPRPS-VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            ++LINC C++  V     +LG++ +    P A TF +LI GLC E +I EA  LF +  
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               EP+V +YNT+INGLC+TG+T +A+++F++M   NG     CKP+ VTYNTIID LC
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPDVVTYNTIIDSLC 239

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K+  V+ A E   +M D  I P+V TY  ++ GFC     NEA RLF EM+ + V PD V
Sbjct: 240 KDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTV 299

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T ++++D LCK G + +A  + E M  +GV PN  TYN L+DGYCL   ++ A+K+F  M
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              GC   V SYN LIN +CK++ ++EA SL +EM  K + P  VTY+TL  GL +  + 
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL +F EM    +  +  TY+  +DG CK G + EAL+L +++++ K E NIV +  L
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479

Query: 505 IDGL 508
           I+G+
Sbjct: 480 IEGM 483



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 87/173 (50%)

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           N  +D A      M+     P+   +   +  +    +      L   M+  G  H+V S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            N LIN  C+   V+ A+S+  +M   GI PT  T+N L  GL    +++ A++LF+EM 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           R     +  +YN  I+GLCK+G    A+++F+ +  +  + ++V+YN +ID L
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  347 bits (891), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 179/430 (41%), Positives = 267/430 (62%), Gaps = 7/430 (1%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           Q   +L    +AL  F++M+  HP P  V  F+ L   L + KHY TVLSL KR+    +
Sbjct: 57  QKGCSLTNIEDALFSFNHMIHKHPLPCIVE-FDKLLSALVRIKHYGTVLSLSKRIELLRI 115

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             D++  +ILINCF ++ RV   F VLG+I++  F P+AVTF+SLI GLC E +   A  
Sbjct: 116 ERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME 175

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
            F +      +P++ TYNT+I G C+ G T VA+ L ++M    G      +P+ V YNT
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG------RPDIVIYNT 229

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           IIDGLCK+  V +A ++F ++K + + PDV TY+ ++ G C ++   EA  LF EMM   
Sbjct: 230 IIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN 289

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + PDVVTF++++D+LCK G + +A  ++++MI +GV PN  TYN+L++GYCL +K+  AR
Sbjct: 290 IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEAR 349

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +F +M + GCM +VVSYN LIN YCK + ++EA  L+ EM  +G+ P    YNTL  GL
Sbjct: 350 MVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGL 409

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +  +   A +LF +M+    + D  T    +D LCK G++  AL LFRA++DS  + N+
Sbjct: 410 CQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNL 469

Query: 499 VSYNCLIDGL 508
           V+Y+ LI  +
Sbjct: 470 VTYDILIRAM 479



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 196/342 (57%), Gaps = 6/342 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F+ L   L     +   +  F  + ++G  P+++T++ +I  FCK+G+ +    +
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL 211

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ ++   P+ V + ++I GLC +  + EA  +F++ +     PDVFTY+ L++GLC 
Sbjct: 212 LKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCN 271

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     A  LF EM + N        P+ VT+N ++D LCKEG + +A+ +   M ++ +
Sbjct: 272 SDQKEEASALFNEMMSLN------IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TY S++ G+C  N   EA+ +F  M+ +G  P+VV+++++++  CK  ++D+A  
Sbjct: 326 EPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M +RG+ PNT+ YNTLI G C   +   AR+LF  M++ GC  D+V+   L++  C
Sbjct: 386 LFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLC 445

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           K   ++ AL L+  M    +KP +VTY+ L   +++  ++ R
Sbjct: 446 KLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  347 bits (890), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 181/423 (42%), Positives = 256/423 (60%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ +L MHP PP +  F  L   +AK KHY TVLSL  +++S G+ P++YT 
Sbjct: 36  TLDDALSSFNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILIN FC + RV   F VL +IL+    P+  TFT+LI+GLC E +I EA  LF K   
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V Y +IID LCK
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCK 208

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TYTS++   C   +W     L  +M++  + PDVV 
Sbjct: 209 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 268

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS ++D LCK GK+ +A  ++++MI RGV P+  TY TL+DG+CL  ++D A K+F  M 
Sbjct: 269 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 328

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   DV+SY TLIN YCK   +++A+ L+ EM  K   P   TYNTL  GL  + +++
Sbjct: 329 RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQ 388

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM       D  TY+  +D LCK+  + EA+ L +AI  S    +I  YN +I
Sbjct: 389 DAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIII 448

Query: 506 DGL 508
           DG+
Sbjct: 449 DGM 451



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 195/374 (52%), Gaps = 6/374 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L K++      +LF ++   G+ PDI+T++ L++  C +    H   +
Sbjct: 194 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 253

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ S   P+ V F++++  LC E ++ EA  +         EPDV TY TL++G C 
Sbjct: 254 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 313

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M            P+ ++Y T+I+G CK   +DKA  LF +M  +  
Sbjct: 314 QSEMDEAVKVFDMMVRKG------FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY +++ G C+     +A  LF EM+ +G  PD+VT+S+++D LCKN  +++A  
Sbjct: 368 IPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMA 427

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    +NP+   YN +IDG C   +++ AR LF ++ S G    V +YN +I+  C
Sbjct: 428 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 487

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA  L+ EM      P   TYNT+  G  + ++  RA++L +EM     +AD  
Sbjct: 488 KRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVS 547

Query: 465 TYNNFIDGLCKSGF 478
           T    ++ L   G 
Sbjct: 548 TTTLLVEMLSDDGL 561



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 215/448 (47%), Gaps = 30/448 (6%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +   +L++   P P ++F  L   L         L LF ++   G  P++ T+  LI
Sbjct: 110 AFSVLAKILKLGHQPDP-TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 168

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CK+G  S    +L  + +    P+ V +TS+I  LC + ++ EA  LF++       
Sbjct: 169 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 228

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK---------- 250
           PD+FTY +L++ LC          L  +M N      VV         CK          
Sbjct: 229 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 288

Query: 251 ----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                     P+ VTY T++DG C +  +D+A ++F  M  +   PDV++YT++I G+C 
Sbjct: 289 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 348

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
            +  ++A  LF EM  +   PD  T++ +M  LC  G++  A  L   M+ RG  P+  T
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y+ L+D  C    ++ A  L  ++E++    D+  YN +I+  C+  ++E A  L+S + 
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           SKG+ P+V TYN +  GL +   +  A KLF EM  N  + D  TYN    G  ++   L
Sbjct: 469 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            A++L   +    +  ++ +   L++ L
Sbjct: 529 RAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 95/207 (45%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  ++A   F  ++     P +V F+ ++  + K         L   M   GV PN YT 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LI+ +C  +++  A  +   +   G   D  ++ TLI   C    + EAL L+ +M+ 
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G +P VVTY TL  GL ++     A++L   M + +   D   Y + ID LCK   V E
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  LF  +       +I +Y  L+  L
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHAL 241


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 182/427 (42%), Positives = 258/427 (60%), Gaps = 8/427 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N  T ++AL  F+ ML MHP PP    FN L   +AK K Y TV SL  +++S G+ PD
Sbjct: 45  LNFNTLDDALSSFNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPD 103

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +YT +ILIN FC + R+   F VL +IL+    P+  TFT+LI+GLC E +I +A  LF 
Sbjct: 104 VYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFD 163

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K      +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V Y +IID
Sbjct: 164 KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIID 217

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCK+  V +A  LF KM  + I+PD+ TYTS+I   C   +W     L  +M++  + P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           DVV FS ++D LCK GK+ +A  ++++MI RGV PN  TYN L+DG+CL  ++D A K+F
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +M  NG   +V+SYNTLIN YCK + +++A  L+ EM  K + P  VTYNTL +    +
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL-MHXCHV 396

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ A+ LF EM  +    D  TY   +D LCK   + EA+ L + I  S  + +I  Y
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 502 NCLIDGL 508
             +IDG+
Sbjct: 457 TIVIDGM 463



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 197/370 (53%), Gaps = 7/370 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L K++      +LF ++   G+ PDI+T++ LI+  C +    H   +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ S   P+ V F++++  LC E +I EA  +     +   EP+V TYN L++G C 
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M + NG       PN ++YNT+I+G CK   +DKA  LF +M  + +
Sbjct: 327 QSEMDEAVKVFDTMVH-NGY-----APNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL 380

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY +++   C+     +A  LF EM+  G  PD+ T+ +++D LCK   +D+A  
Sbjct: 381 IPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMA 439

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    ++P+   Y  +IDG C   +++ AR +F ++ S G   +V +Y  +IN  C
Sbjct: 440 LLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 499

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   ++EA  L+ EM   G  P   TYNT+  GL +  +  RA++L  EM     +AD  
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 559

Query: 465 TYNNFIDGLC 474
           T    ++ LC
Sbjct: 560 TTTLLVEMLC 569



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 172/367 (46%), Gaps = 41/367 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M+    SP  + ++  L   L     +  V +L  ++ ++ + PD+   S +
Sbjct: 227 EAFNLFSKMVGQGISPD-IFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G+++    V+  ++     PN VT+ +L+ G C +S + EA  +F        
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 345

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI--------- 259
            P+V +YNTLING C+      A  LFEEM            PNTVTYNT+         
Sbjct: 346 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKE------LIPNTVTYNTLMHXCHVGRL 399

Query: 260 -------------------------IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
                                    +D LCK+  +D+A  L   ++  N++PD+  YT V
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C A +   A+ +F  +  +G++P+V T++++++ LC+ G +D+A++L   M   G 
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +P+  TYNT+  G     +   A +L   M + G   DV +   L+   C +K  +    
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 579

Query: 415 LYSEMLS 421
           + SE + 
Sbjct: 580 ILSEFVQ 586


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  345 bits (886), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 181/423 (42%), Positives = 256/423 (60%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ +L MHP PP +  F  L   +AK KHY TVLSL  +++S G+ P++YT 
Sbjct: 45  TLDDALSSFNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 103

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILIN FC + RV   F VL +IL+    P+  TFT+LI+GLC E +I EA  LF K   
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V Y +IID LCK
Sbjct: 164 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCK 217

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TYTS++   C   +W     L  +M++  + PDVV 
Sbjct: 218 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 277

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS ++D LCK GK+ +A  ++++MI RGV P+  TY TL+DG+CL  ++D A K+F  M 
Sbjct: 278 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 337

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   DV+SY TLIN YCK   +++A+ L+ EM  K   P   TYNTL  GL  + +++
Sbjct: 338 RKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQ 397

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM       D  TY+  +D LCK+  + EA+ L +AI  S    +I  YN +I
Sbjct: 398 DAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIII 457

Query: 506 DGL 508
           DG+
Sbjct: 458 DGM 460



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 191/359 (53%), Gaps = 6/359 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L K++      +LF ++   G+ PDI+T++ L++  C +    H   +
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ S   P+ V F++++  LC E ++ EA  +         EPDV TY TL++G C 
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 322

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M            P+ ++Y T+I+G CK   +DKA  LF +M  +  
Sbjct: 323 QSEMDEAVKVFDMMVRKG------FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 376

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY +++ G C+     +A  LF EM+ +G  PD+VT+S+++D LCKN  +++A  
Sbjct: 377 IPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMA 436

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    +NP+   YN +IDG C   +++ AR LF ++ S G    V +YN +I+  C
Sbjct: 437 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLC 496

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           K   + EA  L+ EM      P   TYNT+  G  + ++  RA++L +EM     +AD+
Sbjct: 497 KRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 30/429 (6%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +   +L++   P P ++F  L   L         L LF ++   G  P++ T+  LI
Sbjct: 119 AFSVLAKILKLGHQPDP-TTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 177

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CK+G  S    +L  + +    P+ V +TS+I  LC + ++ EA  LF++       
Sbjct: 178 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 237

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK---------- 250
           PD+FTY +L++ LC          L  +M N      VV         CK          
Sbjct: 238 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 297

Query: 251 ----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                     P+ VTY T++DG C +  +D+A ++F  M  +   PDV++YT++I G+C 
Sbjct: 298 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 357

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
            +  ++A  LF EM  +   PD  T++ +M  LC  G++  A  L   M+ RG  P+  T
Sbjct: 358 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVT 417

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y+ L+D  C    ++ A  L  ++E++    D+  YN +I+  C+  ++E A  L+S + 
Sbjct: 418 YSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 477

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           SKG+ P+V TYN +  GL +   +  A KLF EM  N  + D  TYN    G  ++   L
Sbjct: 478 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 537

Query: 481 EALELFRAI 489
            A++L   +
Sbjct: 538 RAIQLLEEM 546


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  344 bits (883), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 184/442 (41%), Positives = 259/442 (58%), Gaps = 26/442 (5%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T + A+  F+ MLRM P PP    FN L   +AK KH+ T+LSL  +++S G+ P+IYT 
Sbjct: 41  TIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILIN FC + RV   F VL +IL+    P+  TFT+LI+G+C E +I EA  LF K   
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIG 159

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PDV TY TLINGLC+ G+T  A+ L   M   N      C+PN   YNTIID LCK
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAYNTIIDSLCK 213

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TY S+I   C   +W     L  EM+D  + PDVV+
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D LCK GK+ +A  +++ MI RGV PN  TY  L+DG+CL  ++D A K+F +M 
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333

Query: 386 SNGCMHDVVSYNTLINWYCKNK-------------------DVEEALSLYSEMLSKGIKP 426
             GCM +V+SYNTLIN YCK +                   +++EA+ ++  M+ KG  P
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMP 393

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V++YNTL  G  +I ++++A+ LF EM R  +  DT TY+  I GLC    + +A+ LF
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +       N+V+Y  L+D L
Sbjct: 454 HEMVACSQIPNLVTYRILLDYL 475



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 207/412 (50%), Gaps = 14/412 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M+    SP  + ++N L   L     +  V +L   +  + + PD+ + + +
Sbjct: 219 EAFNLFSEMVTKGISPD-IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G+V+    V+ ++++    PN VT+T+L+ G C  S + EA  +F       C
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 209 EPDVFTYNTLINGLCRTGHTIVA-------------LNLFEEMANGNGEFGVVCKPNTVT 255
            P+V +YNTLING C+      A             LN+ E +   +      C PN ++
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVIS 397

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I+G CK   +DKA  LF +M  + + PD VTY+++I G C+     +A  LF EM+
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                P++VT+ +++D LCKN  + +A  LL+ +    ++P+    N  IDG C   +++
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            AR LF ++ S G   DV +Y+ +IN  C+   ++EA  L+ EM   G       YNT+ 
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            G    ++  RA++L  EM     +AD  T   F+  L   G      ++ R
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  344 bits (883), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 181/423 (42%), Positives = 255/423 (60%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T + A+  F+ MLRM P PP    FN L   +AK KH+ T+LSL  +++S G+ P+IYT 
Sbjct: 41  TIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILIN FC + RV   F VL +IL+    P+  TFT+LI+G+  E +I EA  LF K   
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PDV TY TLINGLC+ G+T  A+ L   M   N      C+PN   YNTIID LCK
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAYNTIIDSLCK 213

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TY S+I   C   +W     L  EM+D  + PDVV+
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D LCK GK+ +A  +++ MI RGV PN  TY  L+DG+CL  ++D A K+F +M 
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GCM +V+SYNTLIN YCK + +++A+ L+ EM  + + P  VTY+TL  GL  + +++
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM       +  TY   +D LCK+ ++ EA+ L +AI  S  + +I   N  I
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453

Query: 506 DGL 508
           DG+
Sbjct: 454 DGM 456



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 197/383 (51%), Gaps = 6/383 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K++      +LF  + + G+ PDI+T++ LI+  C +    H   +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ S   P+ V+F +++  LC E ++ EA  +  K      EP+V TY  L++G C 
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M          C PN ++YNT+I+G CK   +DKA  LF +M  + +
Sbjct: 319 LSEMDEAVKVFDTMVCKG------CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++I G C+     +A  LF EM+     P++VT+ +++D LCKN  + +A  
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 432

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    ++P+    N  IDG C   +++ AR LF ++ S G   DV +Y+ +IN  C
Sbjct: 433 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 492

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   ++EA  L+ EM   G       YNT+  G    ++  RA++L  EM     +AD  
Sbjct: 493 RRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAS 552

Query: 465 TYNNFIDGLCKSGFVLEALELFR 487
           T   F+  L   G      ++ R
Sbjct: 553 TMTLFVKMLSDDGLDQSLKQILR 575


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 178/428 (41%), Positives = 261/428 (60%), Gaps = 9/428 (2%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           NL +  +A+  F+ +L + P PP V  FN L G L K KHY TV+SL K+++ + + P++
Sbjct: 46  NLHSVADAVASFNQLLGIRPLPP-VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNV 104

Query: 143 YTHSILINCFCKMGR--VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           YT +ILINC C   R  V   F  LG++ +    P  VTF +L+ GLC++++I++A  LF
Sbjct: 105 YTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLF 164

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +       P + TY T+I GLC+ GHT  AL L ++M          CKP+ V YNT+I
Sbjct: 165 DEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG------CKPDVVAYNTVI 218

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           D LCK+   ++A   F +M D+ I P+VVTY+S++ GFC     NEA  LF +M+ + V 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+ VTF++++D LCK G + +A R+ E+M   GV P+ YTY+ L+DGYCL  ++D A+KL
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M   G    V  YN LIN +CK++ + EA +L SEM  + + P  VTY+TL  G  +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             + + A KLF EM    +  D+ TY+  +DGLCK G + EA  L +A+++SK E +I  
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 501 YNCLIDGL 508
           YN LI G+
Sbjct: 459 YNILIQGM 466



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 197/367 (53%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K++  +  +  F  +   G+ P++ T+S +++ FC +G+++    +
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN VTFT L+ GLC E  I+EA  +F        EPD +TY+ L++G C 
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCL 328

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LF+ M  G G       P+   YN +I+G CK   +++AK L  +M D ++
Sbjct: 329 QSQMDEAQKLFDIMV-GKG-----FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++++GFC A     A++LF EM   G+ PD +T+S+++D LCK+G +D+A R
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M    + P+   YN LI G C   K++ AR+LF ++   G    VV+Y  +I+   
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     EA  ++ +M+  G  P   TYN    G         A++L +EM     +AD+ 
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562

Query: 465 TYNNFID 471
           T+   +D
Sbjct: 563 TFQMLLD 569



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 4/228 (1%)

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           NI+P  +T       +   +   +A   F +++     P VV F+ ++  L K       
Sbjct: 29  NISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTV 88

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS---MESNGCMHDVVSYNTL 399
             L + M    + PN YT   LI+  C +++ DH    F +   M   G     V++ TL
Sbjct: 89  ISLCKQMDLSNIRPNVYTLTILINCLCHSNR-DHVHFAFSALGKMFKLGLQPTHVTFGTL 147

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           +N  C    + +A+ L+ E+   G  P+++TY T+  GL +I     AL+L  +M     
Sbjct: 148 LNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGC 207

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             D   YN  ID LCK     EA+  F  + D     N+V+Y+ ++ G
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG 255


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  343 bits (879), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 176/421 (41%), Positives = 255/421 (60%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F++ML   P P  +    +L   +   ++YDTV+SL K++  AGL P+IYT SI
Sbjct: 79  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCF  + RV   F VL +I++    P  VTFT+LI  LC   +  +A  LF       
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV+TY T+INGLC+ G T  A  L ++M          C+PN VTY+TIID   K+ 
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG------CQPNVVTYSTIIDSHRKDR 252

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ++F  MK + I+PD+ TY S+I+G C  + W EA  L  EM    + PD+VTF+
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D +CK GK+ +A  +L+ M   GV P+  TY++L+ GY L  ++  ARKLF +M + 
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  DV SYN LIN YCK K ++EA  L++EM+ +G+ P  V+YNTL  GL ++  +  A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF  M  N    + +TY+  +DG CK G+  +A  LFRA++ +  + N+V YN LID 
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 508 L 508
           +
Sbjct: 493 M 493



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 224/403 (55%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L K   +   + LF  + + G  PD+YT++ +IN  CK+G  +    +
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  +   PN VT++++I     + R+ EA  +F+  +V    PD+FTYN+LI GLC 
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L  EM + N        P+ VT+N ++D +CKEG V +A+ +   M +  +
Sbjct: 286 FSQWKEASALLNEMRSLN------IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+S++ G+   ++  EA++LF  M+ +G +PDV +++++++  CK  ++D+A +
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI +G+ PN  +YNTLI G C    +  AR LF +M +NG + ++ +Y+ L++ +C
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     +A  L+  M S   KP +V YN L   + +   +  A KLF E+    +  +  
Sbjct: 460 KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQ 519

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            Y   I+GLCK G + EALE FR + +     + +SYN +I G
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 173/361 (47%), Gaps = 6/361 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +     K++  +  L +F  +   G+ PDI+T++ LI   C   +      +
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASAL 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ VTF  L+  +C E ++ EA  +         EPDV TY++L+ G   
Sbjct: 296 LNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSL 355

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A  LF+ M          CKP+  +YN +I+G CK   +D+AK+LF +M  + +
Sbjct: 356 RSEVVEARKLFDAMITKG------CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V+Y ++I G C      EA+ LF  M   G  P++ T+S+++D  CK G   KA R
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M      PN   YN LID  C +  +  ARKLF  +   G   +   Y T+IN  C
Sbjct: 470 LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++EAL  +  M   G  P  ++YN +  G        RA++L  EMR     AD  
Sbjct: 530 KEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVG 589

Query: 465 T 465
           T
Sbjct: 590 T 590


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 177/426 (41%), Positives = 260/426 (61%), Gaps = 7/426 (1%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N  T +EAL  F+ ML M P PP V  F  +   +A  KHY TVLSL K+++S G+  D+
Sbjct: 51  NFNTIDEALSSFNRMLHMQP-PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDV 109

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           YT +I+IN FC + RV  GF VL +I +    P+  TFT+LI+GLC E +I EA  LF K
Sbjct: 110 YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 +P+  TY TLI+GLC+ G++  A+ L   M   N      C+PN +TYNTIID 
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN------CEPNVITYNTIIDC 223

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L K+  V++A  +F +M  + I+P+V TY S+I G C  ++W     L  EM+D  + P+
Sbjct: 224 LFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           VV F+ ++D LCK G +  A  ++++MI RGV P+  TY  L+DG+CL  ++D A K+F 
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           +M   GC  +V+SY+TLIN YCK + +++A+ L+ EM  + + P +VTYNTL  GL  + 
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++  A+ LF EM  +    D  TY   +D LCK+  + +A+ + +AI  S    +I SYN
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYN 463

Query: 503 CLIDGL 508
            +IDG+
Sbjct: 464 IVIDGM 469



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 191/374 (51%), Gaps = 6/374 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +  CL K++  +  L++F  + + G+ P++ T++ +I+  CK     H   +
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++ S   PN V FT+L+  LC E  +  A  +         EPDV TY  L++G C 
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +F+ M          C PN ++Y+T+I+G CK   +DKA  LF +M    +
Sbjct: 332 RSEMDEADKVFDTMVRKG------CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTY ++I G C+     +A  LF EM+  G  PD+VT+ +++D LCK   +D+A  
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ +    + P+  +YN +IDG C   +++ A  LF S+ S G   DV +Y  +IN  C
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               + EA  L+ EM + G  P   TYN +  G    ++   A++L  EM     +AD  
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAS 565

Query: 465 TYNNFIDGLCKSGF 478
           T    ++ L   G 
Sbjct: 566 TITLIVEMLSDDGL 579



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 211/428 (49%), Gaps = 15/428 (3%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D A+    ++  C     G        EAL +FD M+     P  V+   ++ G L K  
Sbjct: 143 DTATFTTLIRGLCVEGKIG--------EALHLFDKMVGEGFQPNGVTYGTLIHG-LCKVG 193

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           +    + L + +      P++ T++ +I+C  K  +V+    +   ++    +PN  T+ 
Sbjct: 194 NSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYN 253

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           S+I GLC  S     A L  +       P+V  + TL++ LC+ G   +A ++ + M   
Sbjct: 254 SIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI-- 311

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             + GV  +P+ VTY  ++DG C    +D+A ++F  M  +   P+V++Y+++I G+C  
Sbjct: 312 --QRGV--EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKI 367

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              ++A  LF EM  + + P++VT++ ++  LC  G++  A  L   M+  G  P+  TY
Sbjct: 368 QRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTY 427

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             L+D  C T  +D A  +  ++E +    D+ SYN +I+  C+  ++E A  L+S + S
Sbjct: 428 RILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSS 487

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           KG+ P V TY  +  GL     +  A KLF EM  +  + D  TYN    G  ++   L 
Sbjct: 488 KGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLS 547

Query: 482 ALELFRAI 489
           A++L + +
Sbjct: 548 AIQLLQEM 555



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 7/260 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +FD M+R     P V S++ L     K +  D  + LF+ +    L P+I T++ 
Sbjct: 336 DEADKVFDTMVR-KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C +GR+     +   ++ S   P+ VT+  L+  LC    + +A A+        
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ +YN +I+G+CR G    A +LF  +++          P+  TY  +I+GLC +G
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG------LHPDVWTYTIMINGLCLQG 508

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A +LF +M  +  +PD  TY  + RGF   N+   A +L  EM+ +G   D  T +
Sbjct: 509 LLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTIT 568

Query: 328 VIMDELCKNGKMDKASRLLE 347
           +I++ L  +G      ++L 
Sbjct: 569 LIVEMLSDDGLDQSVKQILH 588


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 181/427 (42%), Positives = 257/427 (60%), Gaps = 7/427 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N  T ++AL  F+ ML MHP PP ++ F  L   + K KHY TVLSL  +++S G+ P+
Sbjct: 35  LNFNTLDDALSSFNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPN 93

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           IYT +ILIN FC + R+   F VL +IL+    PN  TF +LI+GLC E +I E   LF 
Sbjct: 94  IYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFD 153

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K      +P+V TY TLINGLC+ G T  A+ L   M  GN      C+P+ V Y +IID
Sbjct: 154 KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVVYTSIID 207

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCK+  V +A  LF +M  + I+P + TY S+I   C   +W     L  EM++  + P
Sbjct: 208 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VV FS ++D LCK GK+ +A  ++++MI RGV PN  TYN L+DG+CL  ++D A K+F
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 327

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +M   G   DVVSY+TLIN YCK + +E+A+ L+ EM  K + P  VTY+TL  GL  +
Sbjct: 328 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 387

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ A+ LF EM       D  +Y   +D LCK+  + EA+ L +AI  S  + +I  Y
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447

Query: 502 NCLIDGL 508
             +IDG+
Sbjct: 448 TIVIDGM 454



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 196/377 (51%), Gaps = 12/377 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L K++      +LF  +   G+ P I+T++ LI+  C +    H   +
Sbjct: 197 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 256

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ S   PN V F++++  LC E ++MEA  +         EP+V TYN L++G C 
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 316

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                 A+ +F+ M         VCK   P+ V+Y+T+I+G CK   ++KA  LF +M  
Sbjct: 317 RSEMDEAVKVFDTM---------VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 367

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + + P+ VTY++++ G C+     +A  LF EM+ +G  PD V++ +++D LCKN ++D+
Sbjct: 368 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 427

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  LL+ +    ++P+   Y  +IDG C   +++ AR LF ++ S G   +V +Y  +IN
Sbjct: 428 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 487

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+   + EA  L+ EM  KG  P   TYN +  G    ++  R ++L  EM     +A
Sbjct: 488 GLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSA 547

Query: 462 DTYTYNNFIDGLCKSGF 478
           D  T    ++ L   G 
Sbjct: 548 DVSTSTVLVEMLSDDGL 564



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 207/433 (47%), Gaps = 29/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +++FN L   L        VL LF ++   G  P++ T+  LIN  CK+G  S    +
Sbjct: 127 PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL 186

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +    P+ V +TS+I  LC + ++ +A  LF++       P +FTYN+LI+ LC 
Sbjct: 187 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 246

Query: 225 TGHTIVALNLFEEMANGNGEFGVV---------CK--------------------PNTVT 255
                    L  EM N      VV         CK                    PN VT
Sbjct: 247 LCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 306

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN ++DG C    +D+A ++F  M  +   PDVV+Y+++I G+C      +A  LF EM 
Sbjct: 307 YNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMC 366

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P+ VT+S +M  LC  G++  A  L   M+ RG  P+  +Y  L+D  C   ++D
Sbjct: 367 RKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLD 426

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L  ++E +    D+  Y  +I+  C+  ++E A  L+S + SKG+ P V TY  + 
Sbjct: 427 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 486

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +   +  A KLF EM+R   + +  TYN    G  ++   L  ++L + +    + 
Sbjct: 487 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 546

Query: 496 LNIVSYNCLIDGL 508
            ++ +   L++ L
Sbjct: 547 ADVSTSTVLVEML 559



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 42/368 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  M+    SP  + ++N L   L     +  V +L   + ++ + P++   S +
Sbjct: 217 QAFNLFSEMIHQGISPS-IFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G+V     V+  +++    PN VT+ +L+ G C  S + EA  +F        
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV +Y+TLING C+      A+ LFEEM            PNTVTY+T++ GLC  G 
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE------LIPNTVTYSTLMHGLCHVGR 389

Query: 269 VDKAKELFLKM-----------------------------------KDENINPDVVTYTS 293
           +  A  LF +M                                   +  N++PD+  YT 
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 449

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           VI G C A +   A+ LF  +  +G+ P+V T++++++ LC+ G + +AS+L   M  +G
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            +PN  TYN +  G+   ++     +L   M + G   DV +   L+     +   +   
Sbjct: 510 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 569

Query: 414 SLYSEMLS 421
            + SE L 
Sbjct: 570 QILSEFLQ 577


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  342 bits (876), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 179/422 (42%), Positives = 260/422 (61%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY-DTVLSLFKRLNSAGLFPDIYTHS 146
           ++AL  F++ML   P P  +  FN L   + K +HY D V+SL K++  AGL PD YT  
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQ-FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LINCF ++ RV  GF VL +I++       VTF +LI GLC   +  +A  LF      
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +PDV TY T+INGLC+ G T+ A  LF +M    GE G  C+P+ VTY+TIID LCK+
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKM----GEAG--CQPDVVTYSTIIDSLCKD 275

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V++A ++F  MK + I+P++ TY S+I+G C  + W EA  +  EMM   + P++VTF
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S++++  CK G + +A  +L+ M   GV PN  TY++L++GY L  ++  ARKLF  M +
Sbjct: 336 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMIT 395

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  DV SYN LIN YCK K + EA  L++EM+ +G+ P +V+YNTL  GL ++ ++  
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  LF  M  N    D  TY+  +DG CK G++ +A  LFRA++ +  + N+V YN LID
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515

Query: 507 GL 508
            +
Sbjct: 516 AM 517



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 227/412 (55%), Gaps = 7/412 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +FD M+      P V ++  +   L K         LF+++  AG  PD+ T+S +
Sbjct: 210 QAVELFDDMV-ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTI 268

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK  RV+    +   +     +PN  T+ SLI+GLC  SR  EA+A+  +      
Sbjct: 269 IDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNI 328

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++ T++ LIN  C+ G+   A  + + M     E GV  +PN VTY+++++G   +  
Sbjct: 329 MPNIVTFSLLINIFCKEGNVFEARGVLKTMT----EMGV--EPNVVTYSSLMNGYSLQAE 382

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A++LF  M  +   PDV +Y  +I G+C A    EAK+LF EM+ QG+ PD+V+++ 
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LC+ G++ +A  L + M+  G  P+  TY+ L+DG+C    +  A +LF +M+S  
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++V YN LI+  CK+++++EA  L+SE+  +G++P V  Y T+  GL +   ++ AL
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           + F  M  +    + ++YN  I G  +      A++L   +R+  +  ++ +
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  342 bits (876), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 181/427 (42%), Positives = 257/427 (60%), Gaps = 7/427 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N  T ++AL  F+ ML MHP PP ++ F  L   + K KHY TVLSL  +++S G+ P+
Sbjct: 44  LNFNTLDDALSSFNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPN 102

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           IYT +ILIN FC + R+   F VL +IL+    PN  TF +LI+GLC E +I E   LF 
Sbjct: 103 IYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFD 162

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K      +P+V TY TLINGLC+ G T  A+ L   M  GN      C+P+ V Y +IID
Sbjct: 163 KMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVVYTSIID 216

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCK+  V +A  LF +M  + I+P + TY S+I   C   +W     L  EM++  + P
Sbjct: 217 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 276

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VV FS ++D LCK GK+ +A  ++++MI RGV PN  TYN L+DG+CL  ++D A K+F
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 336

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +M   G   DVVSY+TLIN YCK + +E+A+ L+ EM  K + P  VTY+TL  GL  +
Sbjct: 337 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 396

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ A+ LF EM       D  +Y   +D LCK+  + EA+ L +AI  S  + +I  Y
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456

Query: 502 NCLIDGL 508
             +IDG+
Sbjct: 457 TIVIDGM 463



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 196/377 (51%), Gaps = 12/377 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L K++      +LF  +   G+ P I+T++ LI+  C +    H   +
Sbjct: 206 PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTAL 265

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ S   PN V F++++  LC E ++MEA  +         EP+V TYN L++G C 
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 325

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                 A+ +F+ M         VCK   P+ V+Y+T+I+G CK   ++KA  LF +M  
Sbjct: 326 RSEMDEAVKVFDTM---------VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 376

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + + P+ VTY++++ G C+     +A  LF EM+ +G  PD V++ +++D LCKN ++D+
Sbjct: 377 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 436

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  LL+ +    ++P+   Y  +IDG C   +++ AR LF ++ S G   +V +Y  +IN
Sbjct: 437 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 496

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+   + EA  L+ EM  KG  P   TYN +  G    ++  R ++L  EM     +A
Sbjct: 497 GLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSA 556

Query: 462 DTYTYNNFIDGLCKSGF 478
           D  T    ++ L   G 
Sbjct: 557 DVSTSTVLVEMLSDDGL 573



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 207/433 (47%), Gaps = 29/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +++FN L   L        VL LF ++   G  P++ T+  LIN  CK+G  S    +
Sbjct: 136 PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL 195

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +    P+ V +TS+I  LC + ++ +A  LF++       P +FTYN+LI+ LC 
Sbjct: 196 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 255

Query: 225 TGHTIVALNLFEEMANGNGEFGVV---------CK--------------------PNTVT 255
                    L  EM N      VV         CK                    PN VT
Sbjct: 256 LCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 315

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN ++DG C    +D+A ++F  M  +   PDVV+Y+++I G+C      +A  LF EM 
Sbjct: 316 YNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMC 375

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P+ VT+S +M  LC  G++  A  L   M+ RG  P+  +Y  L+D  C   ++D
Sbjct: 376 RKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLD 435

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L  ++E +    D+  Y  +I+  C+  ++E A  L+S + SKG+ P V TY  + 
Sbjct: 436 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 495

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +   +  A KLF EM+R   + +  TYN    G  ++   L  ++L + +    + 
Sbjct: 496 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 555

Query: 496 LNIVSYNCLIDGL 508
            ++ +   L++ L
Sbjct: 556 ADVSTSTVLVEML 568



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 42/368 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  M+    SP  + ++N L   L     +  V +L   + ++ + P++   S +
Sbjct: 226 QAFNLFSEMIHQGISPS-IFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G+V     V+  +++    PN VT+ +L+ G C  S + EA  +F        
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV +Y+TLING C+      A+ LFEEM            PNTVTY+T++ GLC  G 
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE------LIPNTVTYSTLMHGLCHVGR 398

Query: 269 VDKAKELFLKM-----------------------------------KDENINPDVVTYTS 293
           +  A  LF +M                                   +  N++PD+  YT 
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 458

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           VI G C A +   A+ LF  +  +G+ P+V T++++++ LC+ G + +AS+L   M  +G
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            +PN  TYN +  G+   ++     +L   M + G   DV +   L+     +   +   
Sbjct: 519 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVK 578

Query: 414 SLYSEMLS 421
            + SE L 
Sbjct: 579 QILSEFLQ 586


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  341 bits (875), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 179/426 (42%), Positives = 262/426 (61%), Gaps = 7/426 (1%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N +  ++AL  F  M+R++P P  V  F    G  AK K Y TV+SL  +++   +  ++
Sbjct: 70  NNVCVDDALASFYRMVRINPRPS-VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNV 128

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+ +ILINC C++  V     VLG++ +    P+A+TF +LI GLC E +I EA  LF +
Sbjct: 129 YSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNE 188

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 EP+V +Y T+INGLC+TG+T +A+++F++M   NG     CKPN VTY+TIID 
Sbjct: 189 MVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPNVVTYSTIIDS 242

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+  V+ A E   +M +  I P+V TY S++ GFC     NEA RLF EM+ + V P+
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            VTF++++D LCK G + +A  + E M  +GV P+  TYN L+DGYCL   ++ A+K+F 
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   GC     SYN LIN YCK++ ++EA SL +EM  K + P  VTY+TL  GL ++ 
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + + AL LF EM       +  TY   +DG CK G + EAL+L +++++ K E NIV Y 
Sbjct: 423 RPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYT 482

Query: 503 CLIDGL 508
            LI+G+
Sbjct: 483 ILIEGM 488



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/437 (31%), Positives = 222/437 (50%), Gaps = 41/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S NIL  CL +  H D  +S+  ++   G+ PD  T + LIN  C  G++     +  
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFN 187

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV-------------- 212
            +++    PN +++T++I GLC       A  +F K     C+P+V              
Sbjct: 188 EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247

Query: 213 ---------------------FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
                                FTYN++++G C  G    A  LF+EM       G    P
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV------GRDVMP 301

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           NTVT+  ++DGLCKEG V +A+ +F  M ++ + PD+ TY +++ G+C     NEAK++F
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M+ +G  P   +++++++  CK+ +MD+A  LL  M  + +NP+T TY+TL+ G C  
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            +   A  LF  M S G   ++V+Y  L++ +CK+  ++EAL L   M  K ++P +V Y
Sbjct: 422 GRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHY 481

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  G+F   ++E A +LF ++  +    D  TY   I GL K G   EA +LFR + D
Sbjct: 482 TILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMED 541

Query: 492 SKYELNIVSYNCLIDGL 508
             +  N  SYN +I G 
Sbjct: 542 DGFLPNSCSYNVMIQGF 558



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K++  +  +     +   G+ P+++T++ +++ FC +G+++    +
Sbjct: 231 PNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL 290

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PN VTFT L+ GLC E  + EA  +F        EPD+ TYN L++G C 
Sbjct: 291 FKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCL 350

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +FE M          C P   +YN +I+G CK   +D+AK L  +M  + +
Sbjct: 351 QRLMNEAKKVFEIMIRKG------CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPD VTY+++++G C      EA  LF EM   G  P++VT+ +++D  CK+G +D+A +
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  + + PN   Y  LI+G  +  K++ A++LF  +  +G   D+ +Y  +I    
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EA  L+ +M   G  P   +YN +  G  +      A++L DEM     + +  
Sbjct: 525 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLS 584

Query: 465 TYNNFID 471
           T+   +D
Sbjct: 585 TFQMLLD 591



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F+ M++     P V S+  +   L K  +    + +FK++   G  P++ T+S +
Sbjct: 181 EAVELFNEMVK-RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTI 239

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK   V+     L  ++     PN  T+ S++ G C   ++ EA  LF +      
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDV 299

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T+  L++GLC+ G    A  +FE M     E GV  +P+  TYN ++DG C +  
Sbjct: 300 MPNTVTFTILVDGLCKEGMVSEARLVFETMT----EKGV--EPDISTYNALMDGYCLQRL 353

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++AK++F  M  +   P   +Y  +I G+C +   +EAK L  EM  + + PD VT+S 
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M  LC+ G+  +A  L + M   G +PN  TY  L+DG+C    +D A KL  SM+   
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK 473

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++V Y  LI        +E A  L+S++   G +P + TY  +  GL +    + A 
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY 533

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            LF +M  +    ++ +YN  I G  ++     A+ L   +   ++ +N+ ++  L+D
Sbjct: 534 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 1/161 (0%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG   L  P EAL +F  M    P P  V ++ IL     K+ H D  L L K +    L
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLV-TYVILLDGFCKHGHLDEALKLLKSMKEKKL 474

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+I  ++ILI      G++     +  ++      P+  T+T +IKGL  E    EA  
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           LF K       P+  +YN +I G  +   +  A+ L +EM 
Sbjct: 535 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  341 bits (874), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 177/423 (41%), Positives = 256/423 (60%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ ML MHP PP    F  L   +AK KHY TVLSL  +++S G+ PD+YT 
Sbjct: 92  TLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILIN FC + R+ + F VL ++L+    P+  TF +LI+GLC E +I EA  LF K   
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +PDV TY TL+NGLC+ G+T  A+ L   M   N      C+PN + YNTIID LCK
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCK 264

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TY S+I   C   +W     L  EM++  + P+VV 
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS ++D LCK G +  A  ++++MI RGV P+  TY  L+DG+CL  ++D A K+F +M 
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GC+ +V SYN LIN YC+ + +++A+ L  +M  +G+    VTYNTL  GL  + +++
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM  +    D  TY   +D LCK+  + EA+ L +AI  S  + +I+ YN  I
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504

Query: 506 DGL 508
           DG+
Sbjct: 505 DGM 507



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 96/207 (46%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  ++A   F  M+     P  V F+ ++  + K         L   M   G+ P+ YT 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LI+ +C   ++ +A  +   +   GC  D  ++NTLI   C    + EAL L+ + + 
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G +P VVTY TL  GL ++     A++L   M + +   +   YN  ID LCK   V E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  LF  +       +I +YN LI  L
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHAL 297


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  341 bits (874), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 177/423 (41%), Positives = 256/423 (60%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ ML MHP PP    F  L   +AK KHY TVLSL  +++S G+ PD+YT 
Sbjct: 130 TLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILIN FC + R+ + F VL ++L+    P+  TF +LI+GLC E +I EA  LF K   
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +PDV TY TL+NGLC+ G+T  A+ L   M   N      C+PN + YNTIID LCK
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCK 302

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TY S+I   C   +W     L  EM++  + P+VV 
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS ++D LCK G +  A  ++++MI RGV P+  TY  L+DG+CL  ++D A K+F +M 
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GC+ +V SYN LIN YC+ + +++A+ L  +M  +G+    VTYNTL  GL  + +++
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM  +    D  TY   +D LCK+  + EA+ L +AI  S  + +I+ YN  I
Sbjct: 483 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 542

Query: 506 DGL 508
           DG+
Sbjct: 543 DGM 545



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 195/396 (49%), Gaps = 9/396 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K++      +LF  + + G+ PDI+T++ LI+  C +    H   +
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ S   PN V F++++  LC E  I  A  +         EPDV TY  L++G C 
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 407

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M +        C PN  +YN +I+G C+   +DKA  L  +M  + +
Sbjct: 408 RSEMDEAVKVFDTMVHKG------CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 461

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D VTY ++I G C+      A  LF EM+  G  PD+VT+ +++D LCKN  + +A  
Sbjct: 462 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 521

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    ++ +   YN  IDG C   +++ AR LF ++ S G   DV +YN +I+  C
Sbjct: 522 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLC 581

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++EA  L+ +M   G       YNT+  G    ++   A +L  EM     +AD  
Sbjct: 582 KRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVS 641

Query: 465 TYNNFIDGLCKSGF--VLEALELFRAIRDSKYELNI 498
           T    ++ L   G     E L L R + +   EL++
Sbjct: 642 TTTLIVEMLSDDGLDQSFERLRL-RGVGEEDRELHL 676



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 96/207 (46%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  ++A   F  M+     P  V F+ ++  + K         L   M   G+ P+ YT 
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LI+ +C   ++ +A  +   +   GC  D  ++NTLI   C    + EAL L+ + + 
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G +P VVTY TL  GL ++     A++L   M + +   +   YN  ID LCK   V E
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  LF  +       +I +YN LI  L
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHAL 335


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  337 bits (865), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 168/421 (39%), Positives = 249/421 (59%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F++ML   P P  +    +L   +   ++Y  V+SL K++  AGL PDIYT SI
Sbjct: 76  DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+CF  + RV   F V  ++++    P+AVTF +LI GLC   +  +A   F       
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P V+TY T+INGLC+ G T  A  LF++M          C+PN VTYN +ID LCK+ 
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG------CQPNVVTYNILIDSLCKDK 249

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ++F  MK + I+PD+ TY S+I+G C    W EA  L  EM    + P++ TF+
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN 309

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D +CK GK+ +A  + + M   GV P+  TY++L+ GY L  +I  ARKLF +M + 
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D  SYN LI  YCK K ++EA  L++EM+ +G+ P  V YNTL  GL ++ ++  A
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF  M  N    D +TY+  +DG CK G++ +A  LFR ++ +  + +I  YN LID 
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDA 489

Query: 508 L 508
           +
Sbjct: 490 M 490



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 176/361 (48%), Gaps = 6/361 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L K+K  +  L +F  + +  + PDI+T++ LI   C   R      +
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN  TF  L+  +C E ++ EA  +F        EPDV TY++L+ G   
Sbjct: 293 LNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSL 352

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A  LF+ M          CKP+  +YN +I G CK   +D+AK+LF +M  + +
Sbjct: 353 RMEIVEARKLFDAMITKG------CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGL 406

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD V Y ++I G C      EA+ LF  M   G  PD+ T+S+++D  CK G + KA R
Sbjct: 407 TPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFR 466

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L  +M    + P+   YN LID  C    +  ARKLF  +   G + +V  Y T+IN  C
Sbjct: 467 LFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLC 526

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++EAL  +  M   G  P   +YN +  G  +     RA +L  EMR     A+  
Sbjct: 527 KEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAG 586

Query: 465 T 465
           T
Sbjct: 587 T 587



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M+    +P  V+ +N L   L +         LFK ++S G  PD++T+S+
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVN-YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           L++ FCK G +   F +  R+++S +  P+   +  LI  +C    + +A  LF++  V 
Sbjct: 451 LLDGFCKEGYLGKAFRLF-RVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ 509

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+V  Y T+IN LC+ G    AL  F  M  G+G     C P+  +YN II G  + 
Sbjct: 510 GLLPNVQIYTTIINNLCKEGLLDEALEAFRNM-EGDG-----CPPDEFSYNVIIRGFLQY 563

Query: 267 GFVDKAKELFLKMKDENINPDVVTYT 292
               +A +L  +M+D     +  T T
Sbjct: 564 KDESRAAQLIGEMRDRGFVAEAGTTT 589


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 171/421 (40%), Positives = 255/421 (60%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F++ML   P P  +    +L   +   ++YD V+SL K++  AGL P+  T +I
Sbjct: 72  DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC M  V  GF VL ++++    P  +TFT+LI GLC      +A  LF       
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PDV+TY T+INGLC+ G T  A  L ++M    GE G  C+P+ VTY+T+ID LCK+ 
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKM----GEVG--CQPDVVTYSTLIDSLCKDR 245

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ++F  MK + I+P VV+YTS+I+G C  + W EA  +  EM    + PD+VTFS
Sbjct: 246 LVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFS 305

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK G + +A  +L+ M   GV PN  TYN+L+ GY L  ++  ARKLF  M + 
Sbjct: 306 LLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITR 365

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  DV SY+ LIN YC  K ++EA  L++EM+ +G+ P  V+Y TL     ++ ++  A
Sbjct: 366 GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREA 425

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LF +M  N    D  TY+  ++G CK G++ +A  LFRA++ +  + N+V Y  LID 
Sbjct: 426 RELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDS 485

Query: 508 L 508
           +
Sbjct: 486 M 486



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 196/406 (48%), Gaps = 30/406 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M+      P V ++  +   L K         L K++   G  PD+ T+S L
Sbjct: 179 QALELFDDMVA-RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTL 237

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK   V+    +   +     +P  V++TSLI+GLC+ SR  EA+A+  +      
Sbjct: 238 IDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNI 297

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-------------------- 248
            PD+ T++ LI+  C+ G+ + A  + + M     E  V+                    
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARK 357

Query: 249 ---------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                    CKP+  +Y+ +I+G C    +D+AK+LF +M  + + P+ V+YT++I  FC
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 EA+ LF +M   G  PD+ T+SV+++  CK G + KA RL   M    + PN  
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            Y  LID  C +  ++HARKLF  +  +G   DV  Y T+IN  CK   ++EAL  + +M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
              G  P   +YN +  G  +     RA++L  EMR     AD  T
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  335 bits (859), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 176/421 (41%), Positives = 257/421 (61%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL  F++M+  +P P  V  F  LF  L + KHY TV+SL K++  AG+  D+ + +I
Sbjct: 73  NDALSAFNHMVNTNPLPSIVK-FGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC++  V +GF VLG+I++    PN +TF++LI G C E +I  A  LF       
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+V +Y+ +I GLCR G T   + L E M        V C+P+ V YNTI+D LCK+ 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKV------VGCEPDVVIYNTIVDRLCKDR 245

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A  +F KMK   I P VVTYTS+I G      W EA  L  EM    + PD+V FS
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFS 305

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D +CK G++ +A  +L+ M   GV P+  TYNTL++GYCL  ++  ARK+F  M S 
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G M DV S++ L+N YCK K ++EA  L+ EM  +G+ P  V+YNTL  GL +  +   A
Sbjct: 366 GRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEA 425

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LF +M  N    +  TY+  +D L K G++ +A+ LFRA+ +S  + ++V+YN +IDG
Sbjct: 426 EELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485

Query: 508 L 508
           +
Sbjct: 486 M 486



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 6/323 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L K++  +  + +F ++   G+ P + T++ LI+    +GR    F +
Sbjct: 229 PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGL 288

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ V F+ LI  +C E  + EA  +         EPDV TYNTL+NG C 
Sbjct: 289 LNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCL 348

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A  +FE M +  G       P+  +++ +++G CK   +D+AK+LF +M    +
Sbjct: 349 RMEVVEARKVFEVMIS-KGRM-----PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD V+Y ++I G C A    EA+ LF +M   G  P++VT+S+++D L K G +D+A  
Sbjct: 403 IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMG 462

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   G+ P+  TYN +IDG C   K   AR+LF  +   G   +       I+  C
Sbjct: 463 LFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVC 522

Query: 405 KNKDVEEALSLYSEMLSKGIKPT 427
           K   ++EA   + +M      P 
Sbjct: 523 KGGLLDEAHKAFRQMEKDDCSPA 545



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 130/274 (47%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++ A   F  M + N  P +V +  +         +     L  +M   G+  DV++ ++
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN- 387
           +++  C+   +D    +L  +I  G+ PN  T++TLI+G+C+  KI  A +LF  M +  
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 388 ----------------------------------GCMHDVVSYNTLINWYCKNKDVEEAL 413
                                             GC  DVV YNT+++  CK++ V EA+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++ +M   GI PTVVTY +L  GL  + + + A  L +EM+  ++  D   ++  ID +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G V EA  + + + +   E ++ +YN L++G
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 1/169 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +FD M      P  VS +N L   L + +       LFK ++S G  P++ T+SI
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVS-YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++C  K G +     +   +  S   P+ VT+  +I G+C   +  +A  LF +  V  
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
            +P+ +     I+G+C+ G    A   F +M   +      C     TY
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCINGRATY 555



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/101 (20%), Positives = 48/101 (47%)

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           +++ +ALS ++ M++    P++V +  LF  L  +   +  + L  +M    ++ D  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              I+  C+   V     +   I     E N+++++ LI+G
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLING 170


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  335 bits (858), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 177/473 (37%), Positives = 277/473 (58%), Gaps = 45/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +E+   +G  ++ L   ++A+ +F  M++  P P  +  F+ L   +AK   +D V+SL 
Sbjct: 49  REKLSRNGLSELKL---DDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLG 104

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           +++ + G+  + YT+SIL+NCFC+  ++     VLG++++  + P+ VT +SL+ G C  
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 164

Query: 191 SRIMEAAALFTK-----------------HRVF------------------ACEPDVFTY 215
            RI EA AL  +                 H +F                   C+PD+FTY
Sbjct: 165 KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 224

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            T++NGLC+ G   +AL+L ++M  G  E       N V YNTIIDGLCK   +D A +L
Sbjct: 225 GTVVNGLCKRGDIDLALSLLKKMEKGKIE------ANVVIYNTIIDGLCKYKHMDDAFDL 278

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F KM+ + I PDV TY S+I   C    W++A RL  +M+++ + P+VVTF+ ++D   K
Sbjct: 279 FNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK 338

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A +L + MI R ++PN  TYN+LI+G+C+ D++D A+++F  M S  C+ DVV+
Sbjct: 339 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 398

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YNTLI  +CK K VEE + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M 
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + V  D  TY+  +DGLCK G + +AL +F  ++ SK E NI +YN +I+G+
Sbjct: 459 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGM 511



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 221/418 (52%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M+ M   P  V+   ++ G    NK  + V +L  R+ + G  PD++T+  
Sbjct: 168 SEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGT 226

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G +     +L ++ +     N V + ++I GLC    + +A  LF K     
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDVFTYN+LI+ LC  G    A  L  +M            PN VT+N++ID   KEG
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK------INPNVVTFNSLIDAFAKEG 340

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A++LF +M   +I+P++VTY S+I GFC  +  +EA+++F  M+ +   PDVVT++
Sbjct: 341 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 400

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK  ++++   L   M  RG+  NT TYNTLI G       D A+K+F  M S+
Sbjct: 401 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 460

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+++Y+ L++  CK   +E+AL ++  +    ++P + TYN +  G+ +  +VE  
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDG 520

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             LF  +    V  +   Y   I G C+ G   EA  LFR +++     +   YN LI
Sbjct: 521 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 207/395 (52%), Gaps = 12/395 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GDI+L     AL +   M +       V  +N +   L K KH D    LF ++ + G+
Sbjct: 234 RGDIDL-----ALSLLKKMEK-GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD++T++ LI+C C  GR S    +L  ++     PN VTF SLI     E +++EA  
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           LF +    + +P++ TYN+LING C       A  +F  M + +      C P+ VTYNT
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNT 401

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G CK   V++  ELF +M    +  + VTY ++I+G   A D + A+++F +M+  G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V PD++T+S+++D LCK GK++KA  + E +    + PN YTYN +I+G C   K++   
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGW 521

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF S+   G   +V+ Y T+I+ +C+    EEA +L+ EM   G  P    YNTL    
Sbjct: 522 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 581

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
                   + +L  EMR      D  T +  I+ L
Sbjct: 582 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 173/427 (40%), Positives = 258/427 (60%), Gaps = 7/427 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N+ T ++AL +F+ MLRM P PP +  F+ L   + + KHY TVLSL+K+++S G+  +
Sbjct: 30  LNVNTIDDALSLFNRMLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN 88

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
            YT +ILIN FC + R+   F VLG IL+  + P+  TFT+LI+GLC E +I EA  LF 
Sbjct: 89  TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K      +PDV TY TLINGLC+ G+T  A+     M   N      C+P  V Y+TIID
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN------CRPTVVVYSTIID 202

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCK+  + +A  LF  M  + I+P+  TY+S+I G C    W EA RLF  M+ + + P
Sbjct: 203 SLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 262

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D +TF+ ++D LCK G + KA  ++++MI   + P+  TYN+L+DG+CL  ++     +F
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +M   GC+  V+SY TLIN YCK + +++A+ L+ EM  +G+ P  VTYNTL  GL  +
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++  A+ LF EM       D  TY    D LCK+  + EA+ L + I  +  + +I  Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 502 NCLIDGL 508
           + ++DG+
Sbjct: 443 SIVMDGM 449



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F  L   L         L LF ++   G  PD+ T+  LIN  CK+G  S     
Sbjct: 122 PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRF 181

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +    P  V ++++I  LC + ++ EA +LF+        P+ FTY++LI+GLC 
Sbjct: 182 LRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI 241

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            GH   A+ LF  M +          P+ +T+NT++D LCKEG V KA  +   M   ++
Sbjct: 242 LGHWKEAIRLFYAMIHRK------IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S++ G C  ++  +   +F  M+ +G  P V++++ +++  CK   MDKA  
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMG 355

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M  +G+ P+T TYNTLI G C   ++  A  LF  M   G + D+V+Y  L ++ C
Sbjct: 356 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLC 415

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  + EA+ L   +    + P +  Y+ +  G+    ++E A  LF ++    +  D  
Sbjct: 416 KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVR 475

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   I+GLC+ G + EA +LF  + ++    N  +YN +  G
Sbjct: 476 TYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRG 518



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 193/374 (51%), Gaps = 6/374 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K++     LSLF  + + G+ P+ +T+S LI+  C +G       +
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ +TF +L+  LC E  +++A  +         +PDV TYN+L++G C 
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCL 311

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  +N+F+ M          C P+ ++Y T+I+G CK   +DKA  LF +M  + +
Sbjct: 312 RSEMGKTVNVFDTMVRKG------CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY ++I G C+     +A  LF EM+  G  PD+VT+ ++ D LCKN ++ +A  
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+++    ++P+ + Y+ ++DG C   +++ AR LF  + S G   DV +Y  +IN  C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   + EA  L+ EM   G  P   TYN +  G    ++  RA++LF EM     + D  
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545

Query: 465 TYNNFIDGLCKSGF 478
           T    ++ L   G 
Sbjct: 546 TTTLLVEMLSDDGL 559



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 19/260 (7%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M+R     P V S+  L     K +  D  + LF+ ++  GL PD  T++ LI+  
Sbjct: 321 VFDTMVR-KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 153 CKMGRVS------HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           C +GR+       H  VV G+I      P+ VT+  L   LC   R+ EA  L       
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQI------PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 433

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +PD+  Y+ +++G+CR G    A +LF ++++          P+  TY  +I+GLC++
Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG------LHPDVRTYTIMINGLCQQ 487

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G + +A +LF +M +   +P+  TY  + RGF   N+   A +LF EM+ +G   DV T 
Sbjct: 488 GLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTT 547

Query: 327 SVIMDELCKNGKMDKASRLL 346
           +++++ L  +G      ++L
Sbjct: 548 TLLVEMLSDDGLDQSVKQIL 567


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 176/419 (42%), Positives = 246/419 (58%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+  F+ ML M P PPP   FN +   L  NKHY TV+SLFK+    G+ PD+ T SILI
Sbjct: 41  AVASFNLMLLMRP-PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILI 99

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NCFC    ++  F V   IL+  F PNA+T  +LIKGLC    I +A     +      +
Sbjct: 100 NCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQ 159

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D  +Y TLINGLC+TG T     L  ++       G   KP+ V YNTII+ LCK   +
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNKLL 213

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A +++ +M  + I+PDVVTYT++I GFC      EA  L  EM  + + P+V TF+++
Sbjct: 214 GDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNIL 273

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GKM +A  LL +M+   + P+ +TYN+LIDGY L D++ HA+ +F SM   G 
Sbjct: 274 IDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGV 333

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DV  Y  +IN  CK K V+EA+SL+ EM  K + P +VTYN+L  GL + H +ERA+ 
Sbjct: 334 TPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIA 393

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L   M+   +  D Y+Y   +DGLCKSG + +A E+F+ +    Y LN+ +Y  LI+ L
Sbjct: 394 LCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 171/327 (52%), Gaps = 6/327 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L  H   P V  +N +   L KNK       ++  +   G+ PD+ T++ LI+ FC MG 
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH 247

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   F +L  +      PN  TF  LI  L  E ++ EA  L         +PDVFTYN+
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+G         A  +F  MA    + GV   P+   Y  +I+GLCK   VD+A  LF 
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMA----QRGVT--PDVQCYTNMINGLCKTKMVDEAMSLFE 361

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +MK +N+ PD+VTY S+I G C  +    A  L   M +QG+QPDV ++++++D LCK+G
Sbjct: 362 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSG 421

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +++ A  + + ++ +G + N + Y  LI+  C     D A  L   ME  GCM D V+++
Sbjct: 422 RLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFD 481

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGI 424
            +I    +  + ++A  +  EM+++G+
Sbjct: 482 IIIRALFEKDENDKAEKILREMIARGL 508



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 179/346 (51%), Gaps = 6/346 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K      V  L ++L    + PD+  ++ +IN  CK   +     V   +
Sbjct: 164 SYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 223

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+ VT+T+LI G C    + EA +L  + ++    P+V T+N LI+ L + G  
Sbjct: 224 IVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKM 283

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  L   M           KP+  TYN++IDG      V  AK +F  M    + PDV
Sbjct: 284 KEAKILLAVMMKA------CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV 337

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             YT++I G C     +EA  LF EM  + + PD+VT++ ++D LCKN  +++A  L + 
Sbjct: 338 QCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKR 397

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+ P+ Y+Y  L+DG C + +++ A+++F  + + G   +V +Y  LIN  CK   
Sbjct: 398 MKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGF 457

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +EAL L S+M  KG  P  VT++ +   LFE  + ++A K+  EM
Sbjct: 458 FDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 172/426 (40%), Positives = 259/426 (60%), Gaps = 7/426 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M +     P V S+  L      +  ++    LF  +   G+ PD+ T S+
Sbjct: 319 DEARELFKEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     +L  +++    P+ VT T+L+KGLC + RI +A  LF K +   
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+V T  TL+ GLC++G+  +AL L + M +    +G+ CKPN ++Y+ IIDGLCK G
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+ELF +MK   + PDV++YTS+I GFC +  W +AK LF EM+D GVQPDV TFS
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCK GK+ +A+ LLE+MI RG  PNT TY TL+ G C+ D+I  A +LF+ M+  
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK------GIKPTVVTYNTLFLGLFEI 441
           GC+ DVV+Y TL+   C+  +++ AL L+ +MLS         KP V++Y+ +  GL + 
Sbjct: 618 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            + + A +LF EM+   V  +  +Y + I G C+SG + +A  LF  + D   +LN V+Y
Sbjct: 678 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 737

Query: 502 NCLIDG 507
           + +I G
Sbjct: 738 SVMIHG 743



 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 164/427 (38%), Positives = 254/427 (59%), Gaps = 7/427 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M +     P V S+  L     ++  ++    LF  +   G+  D+ T S+
Sbjct: 138 DEARELFKEM-KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSM 196

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     +L  +++     + VT+++LIKGLC + RI EA  LF   +   
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD   Y TL+ GLC+TG+   AL L +EM N  G +G+ CKP  ++Y+ IIDGLCK+ 
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+ELF +MK + I PDV++YT++I GFC +  W +AK LF EM+D G+QPDV T S
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCK GK+ +A++LLE++I RG  P+  T  TL+ G C+  +I  A +LF+ M+  
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----GI--KPTVVTYNTLFLGLFEI 441
           GCM +VV+  TL+   C++ +++ AL L+  MLS     GI  KP  ++Y+ +  GL + 
Sbjct: 437 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 496

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            + + A +LF EM+   V  D  +Y + I G C+SG   +A  LF  + D   + ++ ++
Sbjct: 497 GREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTF 556

Query: 502 NCLIDGL 508
           + LID L
Sbjct: 557 SVLIDML 563



 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 154/379 (40%), Positives = 234/379 (61%), Gaps = 6/379 (1%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            G+ PD+ T  +LI+ FCK G+V     +L  +++     + VT+++LIKGLC + RI E
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  LF   +   C PD   Y TL+ GLC+TG   +AL+L +EM N   ++G+ CKP  V+
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+ IIDGLCK+   D+A+ELF +MK + + PDV++YTS+I GFC +  W +AK LF EM+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D G++ DV T S+++D LCK GK+ +A+ LLE+MI RG   +  TY+TLI G C+  +I 
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS 243

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----GI--KPTVV 429
            A +LF+SM+  GC  D ++Y TL+   C+  ++  AL L+ EML+     GI  KPT++
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +Y+ +  GL +  + + A +LF EM+   +  D  +Y   I G C SG   +A  LF  +
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 490 RDSKYELNIVSYNCLIDGL 508
            D   + ++ + + LID L
Sbjct: 364 LDVGIQPDVTTSSVLIDML 382



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 225/439 (51%), Gaps = 25/439 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLF-----PD 141
           +EA  +F  M ++   P  ++   ++ G L +  + +T L L +  LN  G +     P 
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKG-LCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + ++SI+I+  CK  R      +   +      P+ +++T+LI G C   +  +A  LF 
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      +PDV T + LI+ LC+ G  I A  L E +          C P+ VT  T++ 
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG------CIPDVVTCTTLVK 415

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ---- 317
           GLC +  + KA +LFLKM+     P+VVT  ++++G C + +   A  L   M+      
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 475

Query: 318 GV--QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           G+  +P+ +++S+I+D LCK G+ D+A  L + M   GV P+  +Y +LI G+C + K  
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A+ LF  M   G   DV +++ LI+  CK   V EA  L   M+ +G  P  VTY TL 
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD---- 491
            GL    ++  A +LF +M++     D  TY   + GLC++G +  ALEL + +      
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 492 --SKYELNIVSYNCLIDGL 508
             + ++ +++SY+ +IDGL
Sbjct: 656 YGTNFKPDVISYSIIIDGL 674



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/255 (41%), Positives = 158/255 (61%), Gaps = 1/255 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M  +   P  +S  +++ G   ++  +     LF  +   G+ PD+ T S+
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHG-FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 558

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     +L  +++    PN VT+T+L+KGLC   RI EA  LF K +   
Sbjct: 559 LIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 618

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TY TL+ GLC+TG+   AL L ++M +  G++G   KP+ ++Y+ IIDGLCK G
Sbjct: 619 CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 678

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+ELF +MK   + P+V++YTS+I GFC +    +AK LF EM+DQGVQ + VT+S
Sbjct: 679 REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYS 738

Query: 328 VIMDELCKNGKMDKA 342
           V++   CK G++DKA
Sbjct: 739 VMIHGFCKEGQIDKA 753



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 20/365 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +   L   L           LF ++   G  P++ T + L+   C+ G +     +
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 165 LGRILRSC------FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
              +L           PNA++++ +I GLC   R  EA  LF + +     PDV +Y +L
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I+G CR+G    A  LF EM +     GV  +P+  T++ +ID LCKEG V +A EL   
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVD----IGV--QPDVTTFSVLIDMLCKEGKVIEANELLEV 578

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M      P+ VTYT++++G C  +  +EA +LF++M   G  PDVVT+  +M  LC+ G 
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGN 638

Query: 339 MDKASRLLELMI----WRGVN--PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           +  A  L + M+      G N  P+  +Y+ +IDG C   + D AR+LF  M++ G + +
Sbjct: 639 IKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V+SY +LI+ +C++  +E+A  L++EM+ +G++   VTY+ +  G  +  Q+++A  LF 
Sbjct: 699 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQ 756

Query: 453 EMRRN 457
           +M  N
Sbjct: 757 KMEAN 761



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 221/492 (44%), Gaps = 94/492 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V++  +L     K         L + +   G   DI T+S LI   C   R+S    +
Sbjct: 8   PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIM------------------------------ 194
              + +    P+A+ + +L+KGLC   +I                               
Sbjct: 68  FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127

Query: 195 -----------EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
                      EA  LF + +     PDV +Y +LI+G CR+G    A  LF EM +   
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD--- 184

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
              V  + +  T + +ID LCKEG V +A EL   M       D+VTY+++I+G C  + 
Sbjct: 185 ---VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI----WRGV--NPN 357
            +EA RLF+ M   G +PD + +  +M  LC+ G ++ A +L + M+      G+   P 
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             +Y+ +IDG C   + D AR+LF  M++ G M DV+SY TLI+ +C +   E+A  L++
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 418 EMLSKGIK-----------------------------------PTVVTYNTLFLGLFEIH 442
           EML  GI+                                   P VVT  TL  GL   H
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD--SKYEL---- 496
           ++ +A +LF +M++     +  T    + GLC+SG +  ALEL + +    S Y +    
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481

Query: 497 NIVSYNCLIDGL 508
           N +SY+ +IDGL
Sbjct: 482 NAISYSIIIDGL 493



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 6/199 (3%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  G+QPDV T  V++D  CK GK+ +A+ LLE+M+ RG   +  TY+TLI G C+  +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----GI--KPT 427
           I  A +LF+SM+  GC  D ++Y TL+   C+   +  AL L+ EML+     GI  KPT
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +V+Y+ +  GL +  + + A +LF EM+   +  D  +Y + I G C+SG   +A  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 488 AIRDSKYELNIVSYNCLID 506
            + D     ++ + + LID
Sbjct: 181 EMLDVGIRSDVTTSSMLID 199



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%)

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           ML  GI+P V T   L     +  +V  A +L + M +     D  TY+  I GLC    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + EA +LF +++      + ++Y  L+ GL
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGL 90


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 170/425 (40%), Positives = 257/425 (60%), Gaps = 7/425 (1%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N I+ ++AL  F  M RM+P P  V  F    G +AK K Y TV+ L  +++  G+   +
Sbjct: 70  NTISVDDALASFYRMARMNPRPSIVE-FGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTV 128

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+ +ILINC C++  V     V G++ +    P+ +TFT+LI G+C E +I  A  L+ +
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 EPDV +YNTLINGLC +G+T +A+++F++M   NG     CKPN VTYNTIID 
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ-NG-----CKPNVVTYNTIIDS 242

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+  V+ A +   +M    I PD +TY S++ G C     NEA RLF  M   G +PD
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           VVT+++I+D L K+  ++ A+  L  M+ +G+ P+  TY T++ G C   +++ A +LF 
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ME  GC  DVV+YNT+I+  CK++ V +A+   SEM+ +GI P  VTY+T+  G   + 
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           Q++ A +LF EM   +V  +T T++  +DGLC+ G V EA  +F  + +   E NI +YN
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482

Query: 503 CLIDG 507
            L++G
Sbjct: 483 ALMNG 487



 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 155/454 (34%), Positives = 252/454 (55%), Gaps = 42/454 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +++ M+R     P V S+N L   L  + + +  + +FK++   G  P++ T++ +I
Sbjct: 182 AVELYNEMVR-SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTII 240

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK   V+     L  ++     P+A+T+ S++ GLC   ++ EA  LF +     C+
Sbjct: 241 DSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK 300

Query: 210 PDVFTYN-----------------------------------TLINGLCRTGHTIVALNL 234
           PDV TYN                                   T+++GLC  G    A+ L
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRL 360

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F++M          CKP+ V YNTIID LCK+  V+ A E   +M D  I P+ VTY+++
Sbjct: 361 FKKMEQKG------CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTI 414

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           + GFC     +EA +LF EM+ + V P+ +TFS+++D LC+ G + +A  + E M  +GV
Sbjct: 415 LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGV 474

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN YTYN L++GYCL  K++ ARK+F  M   GC  D+ SYN LIN YC ++ +++A +
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA 534

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L ++M  K + P  VTYNT+  GL  + ++  A +LF +M  + +     TY+  ++GLC
Sbjct: 535 LLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G + EAL+LF+++++ K E +I+ Y  LI+G+
Sbjct: 595 KHGHLDEALKLFKSMKEKKLEPDIILYTILIEGM 628



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 227/411 (55%), Gaps = 7/411 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +F  M   +   P V ++NI+   L K++  +        +   G+ PD+ T++ 
Sbjct: 285 NEATRLFKRM-EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  C +G+++    +  ++ +    P+ V + ++I  LC +  + +A    ++     
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+  TY+T+++G C  G    A  LF+EM   N        PNT+T++ ++DGLC+EG
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN------VMPNTLTFSILVDGLCQEG 457

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+ +F  M ++ + P++ TY +++ G+C     NEA+++F  M+ +G  PD+ +++
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYN 517

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  C + +MDKA  LL  M  + + PNT TYNT++ G C   ++  A++LF  M S+
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS 577

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +  +++Y+ L+N  CK+  ++EAL L+  M  K ++P ++ Y  L  G+F   ++E A
Sbjct: 578 GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVA 637

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
             LF ++  + +     TYN  I GL K G   EA ELFR  +  K+ + I
Sbjct: 638 KGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVII 688



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 121/240 (50%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M   N  P +V +   +        ++    L  +M   GV   V + ++
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LC+   +D A  +   M   G+ P+  T+ TLI+G C   KI  A +L+  M  +G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DV+SYNTLIN  C + +   A+ ++ +M   G KP VVTYNT+   L +   V  A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               EM    +  D  TYN+ + GLC  G + EA  LF+ +  +  + ++V+YN +ID L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%)

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           T  +D A   F  M        +V +   +    K K     + L ++M   G+  TV +
Sbjct: 71  TISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYS 130

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            N L   L  ++ V+ A+ ++ +M +  +  D  T+   I+G+C  G +  A+EL+  + 
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190

Query: 491 DSKYELNIVSYNCLIDGL 508
            S +E +++SYN LI+GL
Sbjct: 191 RSGHEPDVISYNTLINGL 208


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  329 bits (843), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 165/421 (39%), Positives = 265/421 (62%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F+ +LR + +PP    FN + G L K+KHY TVL L +++   G+ P++   +I
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC++G +   F V  +IL+  + P+ +TFT+LIKGLC + +I +A     K     
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  +Y TLI+GLC+ G T  AL+L + + +GN     + +PN V YNTIID +CK  
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVK 239

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A +LF +M  + I+PDVVTY+++I GFC     N+A  LF +M+ + ++PDV TF+
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  CK+GKM +   + ++M+ +G+ PN  TYN+L+DGYCL  +++ A+ +F +M   
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+ SY+ +IN +CK K  +EA++L+ EM  K I P VVTY++L  GL +  ++  A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L+L D+M    V     TYN+ +D LCK   V +A+ L   ++D   + N+ +Y+ LI G
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479

Query: 508 L 508
           L
Sbjct: 480 L 480



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 185/339 (54%), Gaps = 7/339 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +F  M+    SP  V+   ++ G     K  D +  LF ++    + PD+YT +I
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI-DLFNKMILENIKPDVYTFNI 300

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N FCK G++  G  V   +++    PN VT+ SL+ G C    + +A ++F       
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ +Y+ +ING C+      A+NLF+EM   N        P+ VTY+++IDGL K G
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN------IIPDVVTYSSLIDGLSKSG 414

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +L  +M D  + P + TY S++   C  +  ++A  L  ++ D+G+QP++ T+S
Sbjct: 415 RISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYS 474

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  LC++GK++ A ++ E ++ +G N N  TY  +I G+C+    + A  L   ME N
Sbjct: 475 ILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDN 534

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GC+ D  +Y  +I    K  + + A  L  EM+++G++P
Sbjct: 535 GCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 190/367 (51%), Gaps = 6/367 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K       L L +R++   + P++  ++ +I+  CK+  V+  F +   +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+ VT+++LI G C   ++ +A  LF K  +   +PDV+T+N L+N  C+ G  
Sbjct: 252 ISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                +F+ M           KPN VTYN+++DG C    V+KAK +F  M    +NPD+
Sbjct: 312 KEGKTVFDMMMKQG------IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            +Y+ +I GFC    ++EA  LF EM  + + PDVVT+S ++D L K+G++  A +L++ 
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P   TYN+++D  C   ++D A  L   ++  G   ++ +Y+ LI   C++  
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +E+A  ++  +L KG    V TY  +  G         AL L  +M  N    D  TY  
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 469 FIDGLCK 475
            I  L K
Sbjct: 546 IILSLFK 552



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   + K K  +    LF  + S G+ PD+ T+S LI+ FC +G+++    +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P+  TF  L+   C + ++ E   +F        +P+  TYN+L++G C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA G         P+  +Y+ +I+G CK    D+A  LF +M  +NI
Sbjct: 343 VKEVNKAKSIFNTMAQGG------VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+S+I G   +   + A +L  +M D+GV P + T++ I+D LCK  ++DKA  
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIA 456

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  +G+ PN YTY+ LI G C + K++ ARK+F  +   G   +V +Y  +I  +C
Sbjct: 457 LLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
                 EAL+L S+M   G  P   TY  + L LF+  + + A KL  EM
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 35/293 (11%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K N ++Y++          VD A  LF ++   N  P    +  ++     +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  +M  +G++P++V  +++++  C+ G +  A  +   ++  G  P+T T+ TLI G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 370 LTDKIDH-----------------------------------ARKLFVSMESNGCMHDVV 394
           L  +I                                     A  L   ++ N    +VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            YNT+I+  CK K V EA  L+SEM+SKGI P VVTY+ L  G   + ++  A+ LF++M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              ++  D YT+N  ++  CK G + E   +F  +     + N V+YN L+DG
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 104/220 (47%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           ++Y+S    F   ND ++A  LF  ++ +   P    F+ I+  L K+        L + 
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M +RG+ PN    N LI+ +C    I  A  +F  +   G + D +++ TLI   C    
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++A   + ++++ G     ++Y TL  GL ++ +   AL L   +  N V  +   YN 
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ID +CK   V EA +LF  +       ++V+Y+ LI G 
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 64/152 (42%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N  +Y++    +   + +D A  LF  +           +N ++    K+K     L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M  +GIKP +V  N L     ++  +  A  +F ++ +     DT T+   I GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G + +A      +    +  + +SY  LI GL
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGL 200


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  328 bits (842), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 171/426 (40%), Positives = 259/426 (60%), Gaps = 7/426 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M +     P V S+  L      +  ++    LF  +   G+ PD+ T S+
Sbjct: 475 DEARELFEEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 533

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     +L  +++     + VT T+L+KGLC + RI +A  LF K +   
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+V T  TL+ GLC++G+  +AL L + M +    +G+ CKPN ++Y+ IIDGLCK G
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+ELF +MK   + PDV++YTS+I GFC +  W +AK LF EM+D GVQPDV TFS
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCK GK+ +A+ LLE+MI RG  PNT TY TL+ G C+ D+I  A +LF+ M+  
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK------GIKPTVVTYNTLFLGLFEI 441
           GC+ DVV+Y TL+   C+  +++ AL L+ +MLS         KP V++Y+ +  GL + 
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            + + A +LF EM+   V  +  +Y + I G C+SG + +A  LF  + D   +LN V+Y
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 502 NCLIDG 507
           + +I G
Sbjct: 894 SVMIHG 899



 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 173/468 (36%), Positives = 255/468 (54%), Gaps = 57/468 (12%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI---------L 148
           +R+    P   +FNIL  CL   K  +  L+    +   G  PDI T+SI         L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G+V     +L  +++     + VT+++LIKGLC E RI EA  LF   +   C
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TY TL+ GLC+TG+  +AL L +EM N  G +G+ CKP  ++Y+ IIDGLCK+  
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            D+A+ELF +MK + + PDV++YTS+I GFC++  W +AK LF EM+D G+QPDV T  V
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK GK+ +A+ LLE+M+ RG   +  TY+TLI G C+  +I  A +LF+SM+  G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS-------KGIKPTV------------- 428
           C  D ++Y TL+   C+   +  AL L+ EML+       K I+P V             
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 429 ----------------------VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
                                 VTY+TL  GL   H++  A  LF  M++     D  TY
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDS------KYELNIVSYNCLIDGL 508
              + GLC++G +  AL+L + + +       K +  ++SY+ +IDGL
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 468



 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 166/434 (38%), Positives = 258/434 (59%), Gaps = 14/434 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLF------P 140
           +EA  +F  M ++   P  ++   ++ G L +    +  L L +  LN    +      P
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKG-LCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D+ T S+LI+  CK G+V     +L  +++     + VT+++LIKGLC E RI EA  LF
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
              +   C PD  TY TL+ GLC+TG+  +AL L +EM N  G +G+ CKP  ++Y+ II
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DGLCK+   D+A+ELF +MK + I PDV++YT++I GFC +  W +AK LF EM+D G+Q
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PDV T SV++D LCK GK+ +A++LLE++I RG   +  T  TL+ G C+  +I  A +L
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----GI--KPTVVTYNTL 434
           F+ M+  GCM +VV+  TL+   C++ +++ AL L+  MLS     GI  KP  ++Y+ +
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  + + A +LF EM+   V  D  +Y + I G C+SG   +A  LF  + D   
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705

Query: 495 ELNIVSYNCLIDGL 508
           + ++ +++ LID L
Sbjct: 706 QPDVTTFSVLIDML 719



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 229/440 (52%), Gaps = 26/440 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLF-----PD 141
           +EA  +F  M ++   P  ++   ++ G L +  + +  L L +  LN  G +     P 
Sbjct: 106 SEATWLFMSMQKLGCRPDAITYGTLMKG-LCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + ++SI+I+  CK  R      +   +      P+ +++TSLI G C   +  +A  LF 
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      +PDV T   LI+  C+ G  I A  L E M +        C  + VTY+T+I 
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRG------CILDIVTYSTLIK 278

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD----- 316
           GLC +  + +A +LF+ MK     PD + Y ++++G C     N A  L  EM++     
Sbjct: 279 GLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY 338

Query: 317 --QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             + ++PDV T S+++D LCK GK+ +A+ LLE+MI RG   +  TY+TLI G C+  +I
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----GI--KPTV 428
             A  LF+SM+  GC  D ++Y TL+   C+  ++  AL L+ EML+     GI  KPT+
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTL 458

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           ++Y+ +  GL +  + + A +LF+EM+   +  D  +Y   I G C SG   +A  LF  
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + D   + ++ + + LID L
Sbjct: 519 MLDVGIQPDVTTSSVLIDML 538



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 105/255 (41%), Positives = 158/255 (61%), Gaps = 1/255 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M  +   P  +S  +++ G   ++  +     LF  +   G+ PD+ T S+
Sbjct: 656 DEARELFKEMKALGVIPDVISYTSLIHG-FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 714

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     +L  +++    PN VT+T+L+KGLC   RI EA  LF K +   
Sbjct: 715 LIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 774

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TY TL+ GLC+TG+   AL L ++M +  G++G   KP+ ++Y+ IIDGLCK G
Sbjct: 775 CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 834

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+ELF +MK   + P+V++YTS+I GFC +    +AK LF EM+DQGVQ + VT+S
Sbjct: 835 REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYS 894

Query: 328 VIMDELCKNGKMDKA 342
           V++   CK G++DKA
Sbjct: 895 VMIHGFCKEGQIDKA 909



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 223/439 (50%), Gaps = 25/439 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLF-----PD 141
           +EA  +F  M ++   P  ++   ++ G L +  + +  L L +  LN  G +     P 
Sbjct: 399 SEATWLFMSMQKLGCRPDAITYGTLMKG-LCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + ++SI+I+  CK  R      +   +      P+ +++T+LI G C   +  +A  LF 
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      +PDV T + LI+ LC+ G  I A  L E +          C  + VT  T++ 
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG------CILDVVTCTTLVK 571

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ---- 317
           GLC +  + KA +LFLKM+     P+VVT  ++++G C + +   A  L   M+      
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 318 GV--QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           G+  +P+ +++S+I+D LCK G+ D+A  L + M   GV P+  +Y +LI G+C + K  
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A+ LF  M   G   DV +++ LI+  CK   V EA  L   M+ +G  P  VTY TL 
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD---- 491
            GL    ++  A +LF +M++     D  TY   + GLC++G +  ALEL + +      
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 492 --SKYELNIVSYNCLIDGL 508
             + ++ +++SY+ +IDGL
Sbjct: 812 YGTNFKPDVISYSIIIDGL 830



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 189/342 (55%), Gaps = 20/342 (5%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC------FTPNAVTFT 181
            LF ++   G  P++ T + L+   C+ G +     +   +L           PNA++++
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            +I GLC   R  EA  LF + +     PDV +Y +LI+G CR+G    A  LF EM + 
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD- 702

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
               GV  +P+  T++ +ID LCKEG V +A EL   M      P+ VTYT++++G C  
Sbjct: 703 ---IGV--QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 757

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI----WRGVN-- 355
           +  +EA +LF++M   G  PDVVT+  +M  LC+ G +  A  L + M+      G N  
Sbjct: 758 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 817

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+  +Y+ +IDG C   + D AR+LF  M++ G + +V+SY +LI+ +C++  +E+A  L
Sbjct: 818 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL 877

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           ++EM+ +G++   VTY+ +  G  +  Q+++A  LF +M  N
Sbjct: 878 FNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  327 bits (838), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 177/463 (38%), Positives = 262/463 (56%), Gaps = 11/463 (2%)

Query: 45  YPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSP 104
           Y  TT++L    R  +   +   +F  +  K + +        ++A+ +F  ++ MHP P
Sbjct: 21  YAATTTRL----RYAISKFSVFLRFFSDSQKQNAKKKSGFDAIDDAVALFTRLITMHPLP 76

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
             V  FN++ G + K KHY T +SL K++   G+ P I T SILINC+C +G +   F V
Sbjct: 77  S-VVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG +L+  +  NA+T T+++KGLC    + +A              D  TY TLINGLC+
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A  L  +M       G V +PN V YN I+DGLCK+G V +A++L+  +    I
Sbjct: 196 IGLTREAFELLHKME------GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGI 249

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV TYT +I GFC    W E  RL  +M+D+ V  +V T+++++D LCK G + KA  
Sbjct: 250 DPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHD 309

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +  LMI RG  P+  T+NTL+ GYCL + +  ARKLF +    G   DV SYN LI  YC
Sbjct: 310 MRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYC 369

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  ++EALSL+++M  K + P +VTY++L  GL +  ++  A +LF  +     + +  
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  +D LCK   V +A+ELF  + +     N+ SYN LI+G
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 215/391 (54%), Gaps = 6/391 (1%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L  N      L     + + G   D  T+  LIN  CK+G     F +L ++      PN
Sbjct: 158 LCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPN 217

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V +  ++ GLC +  + EA  L++       +PDVFTY  LI+G C  G       L  
Sbjct: 218 VVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLC 277

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           +M + N         N  TYN +ID LCK+G + KA ++   M +    PD+VT+ +++ 
Sbjct: 278 DMVDRNVNL------NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMS 331

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G+C  ND  EA++LF    + G+ PDV ++++++   CKN ++D+A  L   M ++ + P
Sbjct: 332 GYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAP 391

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N  TY++LIDG C + +I +A +LF ++   G   +V++YN +++  CK + V++A+ L+
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           + M  +G+ P V +YN L  G  +  +++ A+ LF+EM R ++  D+ TYN  IDGLCKS
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G +  A ELF  + D    +++++YN L D 
Sbjct: 512 GRISHAWELFNVMHDGGPPVDVITYNILFDA 542



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 118/246 (47%), Gaps = 2/246 (0%)

Query: 265 KEGF--VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           K GF  +D A  LF ++   +  P VV +  ++        +  A  L  +M  +G+ P 
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +VT S++++  C  G M  A  +L +++ RG   N  T  T++ G C+  ++  A +   
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           S+ + G + D V+Y TLIN  CK     EA  L  +M  + ++P VV YN +  GL +  
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            V  A  L+ ++    +  D +TY   I G C  G   E   L   + D    LN+ +YN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 503 CLIDGL 508
            LID L
Sbjct: 293 ILIDAL 298



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 81/196 (41%), Gaps = 41/196 (20%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NIL     KN   D  LSLF ++N   L P+I T+S LI+  CK GR+S+ + +
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 165 LGRI-----------------------------------LRSCFTPNAVTFTSLIKGLCA 189
              I                                        TPN  ++  LI G C 
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             RI EA  LF +       PD  TYN LI+GLC++G    A  LF  M +G     V  
Sbjct: 476 SKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDV-- 533

Query: 250 KPNTVTYNTIIDGLCK 265
               +TYN + D   K
Sbjct: 534 ----ITYNILFDAFSK 545


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 163/421 (38%), Positives = 265/421 (62%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F+ +LR + +PP    FN + G L K+KHY TVL L +++   G+ P++   +I
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC++G +   F V  +IL+  + P+ +TFT+L KGLC + +I +A     K     
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  +Y TLI+GLC+ G T  AL+L + + +GN     + +PN V YNTIID +CK  
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVK 239

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A +LF +M  + I+PDVVTY+++I GFC      +A  LF +M+ + ++PDV TF+
Sbjct: 240 LVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN 299

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  CK+GKM +   + ++M+ +G+ PN  TYN+L+DGYCL  +++ A+ +F +M   
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+ SY+ +IN +CK K  +EA++L+ EM  K I P VVTY++L  GL +  ++  A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L+L D+M    V  +  TYN+ +D LCK+  V +A+ L    +D  ++ +I +Y+ LI G
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479

Query: 508 L 508
           L
Sbjct: 480 L 480



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 212/418 (50%), Gaps = 14/418 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  +L+M   P  ++ F  L   L              ++ + G   D  ++  LI
Sbjct: 139 AFSVFAKILKMGYVPDTIT-FTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI 197

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK+G       +L R+  +   PN V + ++I  +C    + EA  LF++       
Sbjct: 198 HGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGIS 257

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV TY+ LI+G C  G    A++LF +M   N       KP+  T+N +++  CK+G +
Sbjct: 258 PDVVTYSALISGFCILGKLKDAIDLFNKMILEN------IKPDVYTFNILVNAFCKDGKM 311

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            + K +F  M  + I P+ VTY S++ G+C   + N+AK +F  M   GV PD+ ++S++
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  CK  K D+A  L + M  + + P+  TY++LIDG   + +I +A +L   M   G 
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             ++ +YN++++  CK   V++A++L ++   KG +P + TY+ L  GL +  ++E A K
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-------KYELNIVS 500
           +F+++       D Y Y   I G C  G   EAL L   + D+        YE+ I+S
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K       L L +R++   + P++  ++ +I+  CK+  V+  F +   +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+ VT+++LI G C   ++ +A  LF K  +   +PDV+T+N L+N  C+ G  
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                +F+ M           KPN VTYN+++DG C    V+KAK +F  M    +NPD+
Sbjct: 312 KEGKTVFDMMMKQG------IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            +Y+ +I GFC    ++EA  LF EM  + + PDVVT+S ++D L K+G++  A +L++ 
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV PN  TYN+++D  C T ++D A  L    +  G   D+ +Y+ LI   C++  
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +E+A  ++ ++L KG    V  Y  +  G         AL L  +M  N    D  TY  
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 469 FIDGLCK 475
            I  L K
Sbjct: 546 IILSLFK 552



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 182/337 (54%), Gaps = 7/337 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +F  M+    SP  V+   ++ G     K  D +  LF ++    + PD+YT +I
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI-DLFNKMILENIKPDVYTFNI 300

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N FCK G++  G  V   +++    PN VT+ SL+ G C    + +A ++F       
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ +Y+ +ING C+      A+NLF+EM   N        P+ VTY+++IDGL K G
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN------IIPDVVTYSSLIDGLSKSG 414

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +L  +M D  + P++ TY S++   C  +  ++A  L  +  D+G QPD+ T+S
Sbjct: 415 RISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYS 474

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  LC++GK++ A ++ E ++ +G N + Y Y  +I G+C+    + A  L   ME N
Sbjct: 475 ILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDN 534

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           GC+ D  +Y  +I    K  + + A  L  EM+++G+
Sbjct: 535 GCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 184/350 (52%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   + K K  +    LF  + S G+ PD+ T+S LI+ FC +G++     +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P+  TF  L+   C + ++ E   +F        +P+  TYN+L++G C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA G    GV   P+  +Y+ +I+G CK    D+A  LF +M  +NI
Sbjct: 343 VKEVNKAKSIFNTMAQG----GV--NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+S+I G   +   + A +L  +M D+GV P++ T++ I+D LCK  ++DKA  
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIA 456

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL     +G  P+  TY+ LI G C + K++ ARK+F  +   G   DV +Y  +I  +C
Sbjct: 457 LLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
                 EAL+L S+M   G  P   TY  + L LF+  + + A KL  EM
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 141/272 (51%), Gaps = 9/272 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           E   +FD M++    P  V+  +++ G CL K    +   S+F  +   G+ PDI ++SI
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK--EVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN FCK+ +      +   + R    P+ VT++SLI GL    RI  A  L  +     
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ TYN++++ LC+T     A+ L  +  +   +      P+  TY+ +I GLC+ G
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ------PDISTYSILIKGLCQSG 484

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A+++F  +  +  N DV  YT +I+GFC    +NEA  L  +M D G  PD  T+ 
Sbjct: 485 KLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
           +I+  L K  + D A +LL  MI RG+  N Y
Sbjct: 545 IIILSLFKKDENDMAEKLLREMIARGLPLNFY 576



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 123/259 (47%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K N ++Y++          VD A  LF ++   N  P    +  ++     +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  +M  +G++P++V  +++++  C+ G +  A  +   ++  G  P+T T+ TL  G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           L  +I  A      + + G   D +SY TLI+  CK  +   AL L   +    ++P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            YNT+   + ++  V  A  LF EM    ++ D  TY+  I G C  G + +A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + ++ ++N L++  
Sbjct: 287 ILENIKPDVYTFNILVNAF 305


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  324 bits (831), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 162/404 (40%), Positives = 249/404 (61%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+  FN + G L K KHY T +SLFK++   G+ PD++T +ILINCFC +G+++  F V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG+IL+  + PN +T  +L+KGLC +  + ++     K      + D  +Y TL+NGLC+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  AL L   + + +       +PN V YNTIIDGLCK+  V++A +L+ +M    I
Sbjct: 128 IGETRSALKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+TY+++I GFC A    EA  L  EM+ + + P+V T++++MD LCK GK+ +A  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL +M   GV PN  +YNTL+DGYCL  ++ +A+++F +M   G   +V SYN +I+  C
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K V+EA++L  E+L K + P  VTY++L  G  ++ ++  AL L  EM      AD  
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVV 361

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + +D LCK+  + +A  LF  +++   + N  +Y  LIDGL
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 214/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N L   L         L    ++ + G   D  +++ L+N  CK+G       +
Sbjct: 78  PNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKL 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      PN V + ++I GLC +  + EA  L+++       P+V TY+TLI G C 
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCL 197

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L  EM   N        PN  TY  ++D LCKEG V +AK L   M  E +
Sbjct: 198 AGQLMEAFGLLNEMILKN------INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y +++ G+C   +   AK++F  M+ +GV P+V ++++++D LCK+ ++D+A  
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  ++ + + PNT TY++LIDG+C   +I  A  L   M   G   DVV+Y +L++  C
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN+++++A +L+ +M  +GI+P   TY  L  GL +  + + A KLF  +       + +
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I GLCK G + EAL +   + ++    + V++  +I  L
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 200/373 (53%), Gaps = 10/373 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+    + P V  +N +   L K+K  +    L+  +++ G+FP++ T+S LI  FC  G
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAG 199

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++   F +L  ++     PN  T+T L+  LC E ++ EA  L         +P+V +YN
Sbjct: 200 QLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYN 259

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TL++G C  G    A  +F  M     + GV   PN  +YN +ID LCK   VD+A  L 
Sbjct: 260 TLMDGYCLIGEVQNAKQMFHTMV----QKGV--NPNVYSYNIMIDRLCKSKRVDEAMNLL 313

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            ++  +N+ P+ VTY+S+I GFC       A  L  EM  +G   DVVT++ ++D LCKN
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKN 373

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
             +DKA+ L   M  RG+ PN YTY  LIDG C   +  +A+KLF  +   GC  +V +Y
Sbjct: 374 QNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTY 433

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N +I+  CK   ++EAL++ S+M   G  P  VT+  +   LFE  Q ++A KL  EM  
Sbjct: 434 NVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM-- 491

Query: 457 NHVAADTYTYNNF 469
             +A D   + +F
Sbjct: 492 --IAKDLLRFRDF 502


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  324 bits (831), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 162/438 (36%), Positives = 263/438 (60%), Gaps = 11/438 (2%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +ER +S     I  I  ++A+ +F  M+R  P P  V  F+  F  +A+ K ++ VL   
Sbjct: 47  RERLRSG----IVDIKKDDAIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLDFC 101

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K+L   G+  +IYT +I+INCFC+  +    + VLG++++  + P+  TF +LIKGL  E
Sbjct: 102 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            ++ EA  L  +     C+PDV TYN+++NG+CR+G T +AL+L  +M   N       K
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VK 215

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            +  TY+TIID LC++G +D A  LF +M+ + I   VVTY S++RG C A  WN+   L
Sbjct: 216 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 275

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M+ + + P+V+TF+V++D   K GK+ +A+ L + MI RG++PN  TYNTL+DGYC+
Sbjct: 276 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 335

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
            +++  A  +   M  N C  D+V++ +LI  YC  K V++ + ++  +  +G+    VT
Sbjct: 336 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 395

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y+ L  G  +  +++ A +LF EM  + V  D  TY   +DGLC +G + +ALE+F  ++
Sbjct: 396 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 455

Query: 491 DSKYELNIVSYNCLIDGL 508
            SK +L IV Y  +I+G+
Sbjct: 456 KSKMDLGIVMYTTIIEGM 473



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 142/331 (42%), Gaps = 43/331 (12%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL IF+ + +       V    I+ G + K    +   +LF  L   G+ P++ T++++
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEG-MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G +S   ++L ++      PN  T+ +LI+    +  +  +A L  + +    
Sbjct: 505 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564

Query: 209 EPDVFTYNTLINGL----------------CRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
             D  +   +I+ L                 ++   ++ L+  E++   +  F  +   N
Sbjct: 565 SADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCN 624

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV--VTYTSVIRGF-------CYAND 303
           T+T +  ++ +   G           M    +N D+  +  +SV++ F          N+
Sbjct: 625 TITTSLNVNTIEARG-----------MNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNE 673

Query: 304 ---WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK---MDKASRLLELMIWRGVNPN 357
              W         M+D  +  D V ++     + + G+   +  A  L + MI RG+ PN
Sbjct: 674 LLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPN 733

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           T TY++LIDG+C  +++D A ++   M + G
Sbjct: 734 TITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  324 bits (831), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 170/473 (35%), Positives = 272/473 (57%), Gaps = 45/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +E+   +G  ++ L   ++A+ +F  M++  P P  +  F+ L   +AK   +D V+SL 
Sbjct: 49  REKLSRNGLSELKL---DDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLG 104

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           +++ + G+  + YT+SILINCFC+  ++     VLG++++  + PN VT +SL+ G C  
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 191 SRIMEAAALFTK-----------------HRVF------------------ACEPDVFTY 215
            RI EA AL  +                 H +F                   C+PD+ TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             ++NGLC+ G T +A NL  +M  G  E      P  + YNTIIDGLCK   +D A  L
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYNTIIDGLCKYKHMDDALNL 278

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+ + I P+VVTY+S+I   C    W++A RL  +M+++ + PDV TFS ++D   K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A +L + M+ R ++P+  TY++LI+G+C+ D++D A+++F  M S  C  DVV+
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YNTLI  +CK K VEE + ++ EM  +G+    VTYN L  GLF+    + A ++F EM 
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + V  +  TYN  +DGLCK+G + +A+ +F  ++ SK E  I +YN +I+G+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L K KH D  L+LFK + + G+ P++ T+S LI+C C  GR S    +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+  TF++LI     E +++EA  L+ +    + +P + TY++LING C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +FE M + +      C P+ VTYNT+I G CK   V++  E+F +M    +
Sbjct: 374 HDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + VTY  +I+G   A D + A+ +F EM+  GV P+++T++ ++D LCKNGK++KA  
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E +    + P  YTYN +I+G C   K++    LF ++   G   DVV+YNT+I+ +C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    EEA +L+ EM   G  P    YNTL          E + +L  EMR    A D  
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607

Query: 465 T 465
           T
Sbjct: 608 T 608



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 201/403 (49%), Gaps = 7/403 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M+     P  V+ + ++   L K    D   +L  ++    L P +  ++ 
Sbjct: 203 SEAMALIDRMVAKGCQPDLVT-YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   +     +   +      PN VT++SLI  LC   R  +A+ L +      
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDVFT++ LI+   + G  + A  L++EM   +        P+ VTY+++I+G C   
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS------IDPSIVTYSSLINGFCMHD 375

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+AK++F  M  ++  PDVVTY ++I+GFC      E   +F EM  +G+  + VT++
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L + G  D A  + + M+  GV PN  TYNTL+DG C   K++ A  +F  ++ +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                + +YN +I   CK   VE+   L+  +  KG+KP VV YNT+  G       E A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
             LF EM+ +    ++  YN  I    + G    + EL + +R
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F++M+  H   P V ++N L     K K  +  + +F+ ++  GL  +  T++I
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI    + G       +   ++     PN +T+ +L+ GLC   ++ +A  +F   +   
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP ++TYN +I G+C+ G      +LF  ++      GV  KP+ V YNT+I G C++G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 550

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A  LF +MK++   P+   Y ++IR      D   +  L  EM   G   D  T  
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610

Query: 328 VIMDELCKNGKMDKA 342
           ++ + L  +G++DK+
Sbjct: 611 LVTNML-HDGRLDKS 624


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  324 bits (830), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 171/489 (34%), Positives = 274/489 (56%), Gaps = 36/489 (7%)

Query: 20  LRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQ 79
           L C  SS F    +  SSIS     +       +E LR  + D                 
Sbjct: 31  LLCTISSFFSSCERDFSSISNGNVCF-------RERLRSGIVD----------------- 66

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
                I  ++A+ +F  M+R  P P  V  F+  F  +A+ K ++ VL   K+L   G+ 
Sbjct: 67  -----IKKDDAIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
            +IYT +I+INCFC+  +    + VLG++++  + P+  TF +LIKGL  E ++ EA  L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C+PDV TYN+++NG+CR+G T +AL+L  +M   N       K +  TY+TI
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVFTYSTI 234

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ID LC++G +D A  LF +M+ + I   VVTY S++RG C A  WN+   L  +M+ + +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+V+TF+V++D   K GK+ +A+ L + MI RG++PN  TYNTL+DGYC+ +++  A  
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +   M  N C  D+V++ +LI  YC  K V++ + ++  +  +G+    VTY+ L  G  
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  +++ A +LF EM  + V  D  TY   +DGLC +G + +ALE+F  ++ SK +L IV
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474

Query: 500 SYNCLIDGL 508
            Y  +I+G+
Sbjct: 475 MYTTIIEGM 483


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  324 bits (830), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 158/424 (37%), Positives = 257/424 (60%), Gaps = 7/424 (1%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I  ++A+ +F  M+R  P P  V  F+  F  +A+ K ++ VL   K+L   G+  +IYT
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +I+INCFC+  +    + VLG++++  + P+  TF +LIKGL  E ++ EA  L  +  
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C+PDV TYN+++NG+CR+G T +AL+L  +M   N       K +  TY+TIID LC
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLC 239

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           ++G +D A  LF +M+ + I   VVTY S++RG C A  WN+   L  +M+ + + P+V+
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF+V++D   K GK+ +A+ L + MI RG++PN  TYNTL+DGYC+ +++  A  +   M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
             N C  D+V++ +LI  YC  K V++ + ++  +  +G+    VTY+ L  G  +  ++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A +LF EM  + V  D  TY   +DGLC +G + +ALE+F  ++ SK +L IV Y  +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 505 IDGL 508
           I+G+
Sbjct: 480 IEGM 483


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  324 bits (830), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 170/473 (35%), Positives = 272/473 (57%), Gaps = 45/473 (9%)

Query: 71   KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
            +E+   +G  ++ L   ++A+ +F  M++  P P  +  F+ L   +AK   +D V+SL 
Sbjct: 663  REKLSRNGLSELKL---DDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLG 718

Query: 131  KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
            +++ + G+  + YT+SILINCFC+  ++     VLG++++  + PN VT +SL+ G C  
Sbjct: 719  EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778

Query: 191  SRIMEAAALFTK-----------------HRVF------------------ACEPDVFTY 215
             RI EA AL  +                 H +F                   C+PD+ TY
Sbjct: 779  KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 838

Query: 216  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
              ++NGLC+ G T +A NL  +M  G  E      P  + YNTIIDGLCK   +D A  L
Sbjct: 839  GVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYNTIIDGLCKYKHMDDALNL 892

Query: 276  FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
            F +M+ + I P+VVTY+S+I   C    W++A RL  +M+++ + PDV TFS ++D   K
Sbjct: 893  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 952

Query: 336  NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             GK+ +A +L + M+ R ++P+  TY++LI+G+C+ D++D A+++F  M S  C  DVV+
Sbjct: 953  EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012

Query: 396  YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            YNTLI  +CK K VEE + ++ EM  +G+    VTYN L  GLF+    + A ++F EM 
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072

Query: 456  RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             + V  +  TYN  +DGLCK+G + +A+ +F  ++ SK E  I +YN +I+G+
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 1125



 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 152/439 (34%), Positives = 251/439 (57%), Gaps = 10/439 (2%)

Query: 70  LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           L+ER   +   DI L   N+A+ +F  M++  P P  V  FN L   + K K YD V+SL
Sbjct: 155 LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISL 210

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            K++   G+  D+YT +I+INCFC   +VS    +LG++L+  + P+ VT  SL+ G C 
Sbjct: 211 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 270

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            +R+ +A +L  K      +PD+  YN +I+ LC+T     A + F+E+           
Sbjct: 271 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------I 324

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +PN VTY  +++GLC       A  L   M  + I P+V+TY++++  F       EAK 
Sbjct: 325 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF EM+   + PD+VT+S +++ LC + ++D+A+++ +LM+ +G   +  +YNTLI+G+C
Sbjct: 385 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 444

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++   KLF  M   G + + V+YNTLI  + +  DV++A   +S+M   GI P + 
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 504

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L  GL +  ++E+AL +F++M++  +  D  TY   I G+CK+G V EA  LF ++
Sbjct: 505 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + +IV+Y  ++ GL
Sbjct: 565 SLKGLKPDIVTYTTMMSGL 583



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V  +N +   L K KH D  L+LFK + + G+ P++ T+S LI+C C  GR S    +
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L  ++     P+  TF++LI     E +++EA  L+ +    + +P + TY++LING C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  A  +FE M + +      C P+ VTYNT+I G CK   V++  E+F +M    +
Sbjct: 988  HDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              + VTY  +I+G   A D + A+ +F EM+  GV P+++T++ ++D LCKNGK++KA  
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 1101

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            + E +    + P  YTYN +I+G C   K++    LF ++   G   DVV+YNT+I+ +C
Sbjct: 1102 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 1161

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +    EEA +L+ EM   G  P    YNTL          E + +L  EMR    A D  
Sbjct: 1162 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 1221

Query: 465  T 465
            T
Sbjct: 1222 T 1222



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 204/382 (53%), Gaps = 13/382 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL I   ML++   P  V+  +++ G   +N+  D V SL  ++   G  PDI  ++ +I
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 300

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK  RV+  F     I R    PN VT+T+L+ GLC  SR  +AA L +        
Sbjct: 301 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 360

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V TY+ L++   + G  + A  LFEEM        +   P+ VTY+++I+GLC    +
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVR------MSIDPDIVTYSSLINGLCLHDRI 414

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A ++F  M  +    DVV+Y ++I GFC A    +  +LF EM  +G+  + VT++ +
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    + G +DKA      M + G++P+ +TYN L+ G C   +++ A  +F  M+    
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE---IHQVER 446
             D+V+Y T+I   CK   VEEA SL+  +  KG+KP +VTY T+  GL     +H+VE 
Sbjct: 535 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE- 593

Query: 447 ALKLFDEMRRNHVAADTYTYNN 468
              L+ +M++  +  +  T ++
Sbjct: 594 --ALYTKMKQEGLMKNDCTLSD 613



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 201/403 (49%), Gaps = 7/403 (1%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA+ + D M+      P + ++ ++   L K    D   +L  ++    L P +  ++ 
Sbjct: 817  SEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +I+  CK   +     +   +      PN VT++SLI  LC   R  +A+ L +      
Sbjct: 876  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              PDVFT++ LI+   + G  + A  L++EM   +        P+ VTY+++I+G C   
Sbjct: 936  INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS------IDPSIVTYSSLINGFCMHD 989

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +D+AK++F  M  ++  PDVVTY ++I+GFC      E   +F EM  +G+  + VT++
Sbjct: 990  RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 1049

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  L + G  D A  + + M+  GV PN  TYNTL+DG C   K++ A  +F  ++ +
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109

Query: 388  GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                 + +YN +I   CK   VE+   L+  +  KG+KP VV YNT+  G       E A
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169

Query: 448  LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
              LF EM+ +    ++  YN  I    + G    + EL + +R
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 204/443 (46%), Gaps = 46/443 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L     +    D     F +++  G+ PDI+T++IL+   C  G +    V+   +
Sbjct: 470 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG-- 226
            +     + VT+T++I+G+C   ++ EA +LF    +   +PD+ TY T+++GLC  G  
Sbjct: 530 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 589

Query: 227 HTIVAL--NLFEE--------MANGNGEFG-------VVCKPNTVTYNTIIDGLCKEGF- 268
           H + AL   + +E        +++G+           + C         I  G+CK+   
Sbjct: 590 HEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALS 649

Query: 269 --------------------------VDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                                     +D A  LF +M      P ++ ++ ++      N
Sbjct: 650 LLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMN 709

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
            ++    L  +M + G+  +  T+S++++  C+  ++  A  +L  M+  G  PN  T +
Sbjct: 710 KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS 769

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +L++GYC + +I  A  L   M   G   + V++NTLI+    +    EA++L   M++K
Sbjct: 770 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G +P +VTY  +  GL +    + A  L ++M +  +      YN  IDGLCK   + +A
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
           L LF+ +       N+V+Y+ LI
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLI 912



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA  +F++M+  H   P V ++N L     K K  +  + +F+ ++  GL  +  T++I
Sbjct: 992  DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI    + G       +   ++     PN +T+ +L+ GLC   ++ +A  +F   +   
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             EP ++TYN +I G+C+ G      +LF  ++      GV  KP+ V YNT+I G C++G
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 1164

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              ++A  LF +MK++   P+   Y ++IR      D   +  L  EM   G   D  T  
Sbjct: 1165 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 1224

Query: 328  VIMDELCKNGKMDKA 342
            ++ + L  +G++DK+
Sbjct: 1225 LVTNML-HDGRLDKS 1238


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 170/456 (37%), Positives = 265/456 (58%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M++  P P  V  FN L   +AK K +D V+SL +R+ +  +  D+Y+++I
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVE-FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           LINCFC+  ++     VLG++++  + P+ VT +SL+ G C   RI +A AL  +     
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 203 ------------HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                       H +F                   C+PD+ TY  ++NGLC+ G   +AL
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L ++M  G  E       + V YNTIIDGLCK   +D A  LF KM+ + I PDV TY 
Sbjct: 241 SLLKKMEKGKIE------ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYN 294

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+I   C    W++A RL   M+++ + P+VVTFS ++D   K GK+ +A +L + MI R
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            ++P+ +TY++LI+G+C+ D++D A+ +F  M S  C  +VV+YNTLI  +CK K VEE 
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M  + V  D  TY+  +DG
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G + +AL +F  ++ SK E +I +YN +I+G+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 212/395 (53%), Gaps = 12/395 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GDI+L     AL +   M +       V  +N +   L K KH D   +LF ++ + G+
Sbjct: 233 RGDIDL-----ALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD++T++ LI+C C  GR S    +L  ++     PN VTF++LI     E +++EA  
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ +    + +PD+FTY++LING C       A ++FE M + +      C PN VTYNT
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNT 400

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G CK   V++  ELF +M    +  + VTY ++I+G   A D + A+++F +M+  G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V PD++T+S+++D LCK GK++KA  + E +    + P+ YTYN +I+G C   K++   
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF S+   G   +V+ Y T+I+ +C+    EEA +L+ EM   G  P    YNTL    
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 580

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
                   + +L  EMR      D  T +  I+ L
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 208/438 (47%), Gaps = 42/438 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + D M+ M   P  V+   ++ G    NK  + V +L  ++   G  PD+ T+  
Sbjct: 167 SDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGA 225

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G +     +L ++ +     + V + ++I GLC    I +A ALF K     
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285

Query: 208 CEPDVFTYNTLINGLC-----------------------------------RTGHTIVAL 232
             PDVFTYN+LI+ LC                                   + G  + A 
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L++EM   +        P+  TY+++I+G C    +D+AK +F  M  ++  P+VVTY 
Sbjct: 346 KLYDEMIKRS------IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I+GFC A    E   LF EM  +G+  + VT++ ++  L + G  D A ++ + M+  
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV P+  TY+ L+DG C   K++ A  +F  ++ +    D+ +YN +I   CK   VE+ 
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+  +  KG+KP V+ Y T+  G       E A  LF EM+ +    D+  YN  I  
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579

Query: 473 LCKSGFVLEALELFRAIR 490
             + G    + EL + +R
Sbjct: 580 RLRDGDKAASAELIKEMR 597



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 118/237 (49%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A  LF +M      P +V +  ++        ++    L   M +  +  D+ ++++
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C+  ++  A  +L  M+  G  P+  T ++L++GYC + +I  A  L   M   G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D V++NTLI+    +    EA++L  +M+ +G +P +VTY  +  GL +   ++ AL
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            L  +M +  + AD   YN  IDGLCK   + +A  LF  +       ++ +YN LI
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 35/208 (16%)

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           N K+D A  L   M+     P+   +N L+       K D    L   M++    +D+ S
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 396 YNTLI-----------------------------------NWYCKNKDVEEALSLYSEML 420
           YN LI                                   N YC +K + +A++L  +M+
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G KP  VT+NTL  GLF  ++   A+ L D+M +     D  TY   ++GLCK G + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            AL L + +   K E ++V YN +IDGL
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGL 265


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/488 (37%), Positives = 276/488 (56%), Gaps = 19/488 (3%)

Query: 22  CNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGD 81
           C  +S FP    P   I  +  S+ T ++ +   ++ +  ++     F++ +CKS     
Sbjct: 2   CTTTSPFP---SPALHIPLH--SHCTKSTNINHEIQ-SHSNKTQFLNFMRNQCKSG---- 51

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFP 140
             L + +EAL  F  M +M+P P  V  F +L G + K KHY T +SL K ++S+ G+ P
Sbjct: 52  -KLKSIDEALNFFHTMAKMNPLPS-VIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKP 109

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D +  +++IN  C +  V+ GF VLG +L+    P+ VTFT LI GLC +  +  A  L 
Sbjct: 110 DTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELV 169

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
                     DV TY  LINGLC+ G T  A+    +M   N        PN V Y+T++
Sbjct: 170 DHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN------PNVVVYSTVM 223

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DGLCK+G V +A  L L+M  + I P++VTYT +I+G C    W EA  L  EMM  GV 
Sbjct: 224 DGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVM 283

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD+ + ++++D LCK GK+ +A  ++  MI  G  P+ +TYN+LID YCL +++D A ++
Sbjct: 284 PDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRV 343

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M S GC+ D+V+Y +LI+ +CK K++ +A+ L  EM+  G  P VVT+ TL  G  +
Sbjct: 344 FELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQ 403

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           + +   A +LF  M +     +  T    +DGLCKS  + EAL LF A+  S  +LNIV 
Sbjct: 404 VGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVI 463

Query: 501 YNCLIDGL 508
           Y+ ++DG+
Sbjct: 464 YSIILDGM 471



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 200/433 (46%), Gaps = 29/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F IL   L         + L   +   G   D+ T+ +LIN  CKMG+ S     
Sbjct: 144 PSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGW 203

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++    + PN V +++++ GLC +  + EA  L  +      +P++ TY  LI GLC 
Sbjct: 204 LRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCN 263

Query: 225 TGHTIVALNLFEEM---------ANGNGEFGVVCK--------------------PNTVT 255
            G    A +L +EM          + N    V+CK                    P+  T
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFT 323

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++ID  C +  +D+A  +F  M      PD+V YTS+I G+C   + N+A  L  EM+
Sbjct: 324 YNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMI 383

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G  PDVVT++ ++   C+ G+   A  L   M   G  PN  T   ++DG C +  + 
Sbjct: 384 KVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLS 443

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF +ME +    ++V Y+ +++  C    +  AL L+S + +KG++  V  Y  + 
Sbjct: 444 EALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMI 503

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +   +++A  L   M  N    D+ TYN F+ GL     +  +++    +RD  + 
Sbjct: 504 NGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFS 563

Query: 496 LNIVSYNCLIDGL 508
           ++  +   +I+ L
Sbjct: 564 VDATTTEMIINYL 576



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 156/333 (46%), Gaps = 7/333 (2%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  N     EA  + D M++M   P  + S NIL   L K        S+   +   G 
Sbjct: 259 QGLCNFGRWKEAGSLLDEMMKMGVMPD-LQSLNILVDVLCKEGKIMQAKSVIGFMILVGE 317

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD++T++ LI+ +C   ++     V   ++     P+ V +TSLI G C    I +A  
Sbjct: 318 VPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMH 377

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L  +       PDV T+ TLI G C+ G  + A  LF  M     ++G V  PN  T   
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH----KYGQV--PNLQTCAI 431

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I+DGLCK   + +A  LF  M+  N++ ++V Y+ ++ G C A   N A  LF  +  +G
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +Q +V  ++++++   K G +DKA  LL  M   G  P++ TYN  + G     +I  + 
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSI 551

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           K    M   G   D  +   +IN+   N+   E
Sbjct: 552 KYLTMMRDKGFSVDATTTEMIINYLSTNQGDNE 584


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  320 bits (821), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 165/415 (39%), Positives = 250/415 (60%), Gaps = 7/415 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F+ +L ++P+PP +  F  + G L K   Y T +SL + +   G+  D+ T +ILINCF 
Sbjct: 44  FNRILNINPTPP-IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFS 102

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           ++G     F V   IL+  + PNA+T T+LIKGLC + +I +A     K        +  
Sbjct: 103 QLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKV 162

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y TLINGLC+ G T  AL L   +       G + +PN V YNTIID +CK   V++A 
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAF 216

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L+ +M  + I+PDVVTY+++I GFC     N+A  LF +M+ + + PDV TFS+++D  
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK G++ +A  +L +M+ +G+ P+  TY +L+DGYCL  +++ A+ +F +M   G   +V
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            SYN +IN +CK K V+EA++L+ EM  K I P VVTYN+L  GL +  ++  ALKL DE
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M    V  D  TYN+ +D LCK+  V +A+ L   ++D   + ++ +Y  LIDGL
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   + K K  +    L+  + S G+ PD+ T+S LI+ FC +G+++    +
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P+  TF+ L+ G C E R+ EA  +         +PDV TY +L++G C 
Sbjct: 254 FNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA G    GV    N  +YN +I+G CK   VD+A  LF +M  +NI
Sbjct: 314 VKQVNKAKSIFNTMAQG----GVTA--NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S+I G C +   + A +L  EM D+GV  D +T++ I+D LCKN ++DKA  
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M   G+ P+ YTY  LIDG C   ++  A+ +F  +   G    V +Y  +I  +C
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            N   ++AL+L S+M   G  P   TY  + L LFE  + + A KL  EM
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 183/337 (54%), Gaps = 7/337 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  ++  M+    SP  V+   ++ G     K  D +  LF ++ S  + PD+YT SI
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI-GLFNKMISEEINPDVYTFSI 271

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK GRV     VL  +++    P+ VT+ SL+ G C   ++ +A ++F       
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +V +YN +ING C+      A+NLF+EM   N        P+ VTYN++IDGLCK G
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN------IIPDVVTYNSLIDGLCKSG 385

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +L  +M D  +  D +TY S++   C  +  ++A  L  +M D+G+QPD+ T++
Sbjct: 386 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYT 445

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK G++  A  + E ++ +G N   YTY  +I G+C  D  D A  L   ME N
Sbjct: 446 ILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDN 505

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           GC+ +  +Y  +I    +  + + A  L  EM+++G+
Sbjct: 506 GCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 393 VVSYNTLINWYCKNKDVEEAL-SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           ++S +     +  ++D E +L S ++ +L+    P +  +  +   L +I+  + A+ L 
Sbjct: 20  IISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLH 79

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EM  N +A+D  T+N  I+   + G    +  +F  I    YE N ++   LI GL
Sbjct: 80  REMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGL 136


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  320 bits (821), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 173/421 (41%), Positives = 256/421 (60%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP +  FN +    AK KHY T +SL  RL   G+ PD+ T +I
Sbjct: 41  DDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC MG+++ GF VL +IL+  + P+ +TFT+LIKGLC + ++ +A     K     
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  +Y TLING+C+ G T  A+ L  ++       G + KPN   YNTIID LCK  
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIIDALCKYQ 213

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ DVVTYT++I GFC A+   EA  L  EM+ + + P+V T++
Sbjct: 214 LVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK GK+ +A  +L +M+   V P+  TY+TL+DGY L  ++  A+ +F +M   
Sbjct: 274 ILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLM 333

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV SY  LIN +CKNK V+EAL+L+ EM  K + P +VTY++L  GL +  ++   
Sbjct: 334 GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L DEMR   + A+  TYN+ IDGLCK+G +  A+ LF  ++D        ++  L+DG
Sbjct: 394 WDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDG 453

Query: 508 L 508
           L
Sbjct: 454 L 454



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F  L   L      +  L    +L + G+  D  ++  LIN  CK+G       +
Sbjct: 127 PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 186

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + +I      PN   + ++I  LC    + EA  LF++        DV TY TLI G C 
Sbjct: 187 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCI 246

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L  EM            PN  TYN ++D LCKEG V +AK +   M    +
Sbjct: 247 ASKLKEAIGLLNEMVLKT------INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACV 300

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TY++++ G+    +  +A+ +F  M   GV PDV +++++++  CKN  +D+A  
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALN 360

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  + + P   TY++LIDG C + +I +   L   M   G   +V++YN+LI+  C
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLC 420

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  ++ A++L+++M  +GI+P   T+  L  GL +  +++ A + F ++       D Y
Sbjct: 421 KNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVY 480

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  I+G CK G + EAL +   + ++    N V+++ +I+ L
Sbjct: 481 KYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 183/338 (54%), Gaps = 9/338 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +EA  +F  M     S   V+   +++G C+A        + L   +    + P++YT++
Sbjct: 216 SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASK--LKEAIGLLNEMVLKTINPNVYTYN 273

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           IL++  CK G+V     VL  +L++C  P+ +T+++L+ G      + +A  +F    + 
Sbjct: 274 ILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLM 333

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV +Y  LING C+      ALNLF+EM   N        P  VTY+++IDGLCK 
Sbjct: 334 GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSLIDGLCKS 387

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +    +L  +M+D  I  +V+TY S+I G C     + A  LF +M DQG++P   TF
Sbjct: 388 GRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D LCK G++  A    + ++ +G + + Y YN +I+G+C    ++ A  +   ME 
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEE 507

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           NGC+ + V+++ +IN   K  + ++A  L  +M+ +G+
Sbjct: 508 NGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 185/352 (52%), Gaps = 6/352 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  +N +   L K +       LF  + + G+  D+ T++ LI  FC   ++    
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     PN  T+  L+  LC E ++ EA  +         +PDV TY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                   A ++F  M+      GV   P+  +Y  +I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYELKKAQHVFNAMS----LMGVT--PDVHSYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ P +VTY+S+I G C +   +    L  EM D+G+  +V+T++ ++D LCKNG +D+A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L   M  +G+ P ++T+  L+DG C   ++  A++ F  + + G   DV  YN +IN 
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +CK   +EEAL++ S+M   G  P  VT++ +   LF+  + ++A KL  +M
Sbjct: 489 HCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 198/402 (49%), Gaps = 7/402 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL   D +L        VS +  L   + K       + L ++++     P++  ++ 
Sbjct: 146 NKALHFHDKLLAQGIKFDQVS-YGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNT 204

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   VS  + +   +     + + VT+T+LI G C  S++ EA  L  +  +  
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V+TYN L++ LC+ G    A N+   M           KP+ +TY+T++DG     
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVM------LKACVKPDVITYSTLMDGYFLVY 318

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + KA+ +F  M    + PDV +YT +I GFC     +EA  LF EM  + + P +VT+S
Sbjct: 319 ELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LCK+G++     L++ M  RG+  N  TYN+LIDG C    +D A  LF  M+  
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G      ++  L++  CK   +++A   + ++L+KG    V  YN +  G  +   +E A
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           L +  +M  N    +  T++  I+ L K     +A +L R +
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M      P ++ +  ++  F     ++ A  L   +  +G+QPD++T ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C  G++     +L  ++ RG  P+T T+ TLI G CL  +++ A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 389 CMHDVVSYNTLINWYCKNKD-----------------------------------VEEAL 413
              D VSY TLIN  CK  D                                   V EA 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+SEM +KGI   VVTY TL  G     +++ A+ L +EM    +  + YTYN  +D L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G V EA  +   +  +  + ++++Y+ L+DG
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 170/453 (37%), Positives = 261/453 (57%), Gaps = 30/453 (6%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I  ++A+ +F  M++  P  P V  FN LF  +AK K Y+ VL+L K++ S G+   IYT
Sbjct: 67  IKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            SI+INCFC+  ++S+ F  +G+I++  + P+ V F +L+ GLC E R+ EA  L  +  
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------FGVVCKP---- 251
               +P + T NTL+NGLC  G    A+ L + M     +           V+CK     
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 252 ----------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                           + V Y+ IIDGLCK+G +D A  LF +M+ +    D++TY ++I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC A  W++  +L  +M+ + + P+VVTFSV++D   K GK+ +A +LL+ M+ RG+ 
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TYN+LIDG+C  ++++ A ++   M S GC  D++++N LIN YCK   +++ L L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           + EM  +G+    VTYNTL  G  +  ++E A KLF EM    V  D  +Y   +DGLC 
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G + +ALE+F  I  SK EL+I  Y  +I G+
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 188/383 (49%), Gaps = 6/383 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           ++I+   L K+   D   +LF  +   G   DI T++ LI  FC  GR   G  +L  ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           +   +PN VTF+ LI     E ++ EA  L  +       P+  TYN+LI+G C+     
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A+ + + M +        C P+ +T+N +I+G CK   +D   ELF +M    +  + V
Sbjct: 386 EAIQMVDLMISKG------CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++++GFC +     AK+LF EM+ + V+PD+V++ +++D LC NG+++KA  +   +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
               +  +   Y  +I G C   K+D A  LF S+   G   D  +YN +I+  C+   +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            +A  L+ +M  +G  P  +TYN L            A +L +EM+ +   AD  T    
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619

Query: 470 IDGLCKSGFVLEALELFRAIRDS 492
           I+ L         L++    R S
Sbjct: 620 INMLSSGELDKSFLDMLSTTRAS 642



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 30/450 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D M+ M   P  ++  N L   L  N      + L  R+   G  P+  T+  
Sbjct: 175 SEALELVDRMVEMGHKPTLIT-LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G+ +    +L ++       +AV ++ +I GLC +  +  A  LF +  +  
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
            + D+ TYNTLI G C  G       L  +M        VV                   
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       PNT+TYN++IDG CKE  +++A ++   M  +  +PD++T+  +I G+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C AN  ++   LF EM  +GV  + VT++ ++   C++GK++ A +L + M+ R V P+ 
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            +Y  L+DG C   +++ A ++F  +E +    D+  Y  +I+  C    V++A  L+  
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +  KG+K     YN +   L     + +A  LF +M     A D  TYN  I        
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              A EL   ++ S +  ++ +   +I+ L
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINML 623


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 168/423 (39%), Positives = 250/423 (59%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ ML MHP PP +  F  +   + K K Y TVLSL ++++S G+  ++YT 
Sbjct: 54  TLDDALSSFNRMLHMHP-PPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++LIN FC + RV+  F VL +IL+    P+  +FT+LIKGLC E +I EA  LF K   
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +PDV  Y TLINGLC+TGHT  A+ L   M  GN      C+P+ V Y T+I  LCK
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN------CQPDVVVYGTLIHSLCK 226

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +    +A  LF +M  + I+P++VT  S++   C   +W     L  EM+D  + P+ ++
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            + ++D LCK G + +A  ++++M   GV P+  TY  LIDG+CL  ++D A K+F  M 
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GC  +V SYNTLIN YCK + +++A+ L+ EM  + + P  VTYNTL  GL  + +++
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM       D  TY   +D LCK+  + +A+ L +AI  S  + +I  Y  +I
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVI 466

Query: 506 DGL 508
           DG+
Sbjct: 467 DGM 469



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 189/374 (50%), Gaps = 6/374 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  L   L K++      +LF  + + G+ P+I T + L+   C +G   H   +
Sbjct: 212 PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ S   PNA++ T+++  LC E  + +A  +         EPDV TY  LI+G C 
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F+ M +        C PN  +YNT+I+G CK   +DKA  LF +M  + +
Sbjct: 332 RSEMDEAVKVFDMMVHKG------CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY ++I G C+     +A  LF EM+  G  PD+VT+ +++D LCKN  +DKA  
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +    ++P+   Y  +IDG C   +++ AR LF ++ S G   +V +YN + +  C
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++EA  L+ EM          TYNT+  G    ++  RA++L +EM     + D  
Sbjct: 506 KRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVS 565

Query: 465 TYNNFIDGLCKSGF 478
           T    +  L   G 
Sbjct: 566 TTTLLVGMLSDDGL 579



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 131/262 (50%), Gaps = 7/262 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +FD M+      P V S+N L     K +  D  + LF+ +    L P+  T++ 
Sbjct: 336 DEAVKVFDMMVH-KGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C +GR+     +   ++     P+ VT+  L+  LC    + +A AL        
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD+  Y  +I+G+CR G    A +LF  +++         KPN  TYN +  GLCK G
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG------LKPNVWTYNIMTHGLCKRG 508

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A +LF++M +   + D  TY ++ +GF   N+ + A +L  EM+ +G   DV T +
Sbjct: 509 LLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTT 568

Query: 328 VIMDELCKNGKMDKASRLLELM 349
           +++  L  +G     +  LE M
Sbjct: 569 LLVGMLSDDGLDQSEAHKLEDM 590



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%)

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           + + N  ++A   F  M+     P +V F+ I+  + K  +      L   M   G+  N
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
            YT N LI+ +C  ++++ A  +   +   GC  D  S+ TLI   C    + EAL L+ 
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +M+ +G +P VV Y TL  GL +      A++L   M + +   D   Y   I  LCK  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +A  LF  +       NIV+ N L+  L
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 158/438 (36%), Positives = 262/438 (59%), Gaps = 11/438 (2%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +ER +S     I  I  ++A+ +F  M+R  P P  V  F+  F  +A+ K ++ VL   
Sbjct: 57  RERLRSG----IVDIKKDDAIALFQEMIRSRPLPGLVD-FSRFFSAIARTKQFNLVLDFC 111

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K+L   G+  +IYT +I+INCFC+  +    + VLG++++  + P+  TF +LI GLC E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 171

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            ++ +A  L  +     C+PD+ TYN+++NG+CR+G T +A ++  +M   N       K
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN------VK 225

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            +  TY+TIID LC++G +D A  LF +M+ + I   VVTY S++RG C A  WN+   L
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M+ + + P+V+TF+V++D   K GK+ +A+ L + MI RG++PN  TYNTL+DGYC+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
            +++  A  +   M  N C  D+V++ +LI  YC  K V++ + ++  +  +G+    VT
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y+ L  G  +  +++ A +LF EM  + V  D  TY   +DGLC +G + +ALE+F  ++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465

Query: 491 DSKYELNIVSYNCLIDGL 508
            SK +L IV Y  +I+G+
Sbjct: 466 KSKMDLGIVMYTTIIEGM 483


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 169/456 (37%), Positives = 266/456 (58%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M++  P P  V  FN L   +AK   +D V+SL +R+ +  +  D+Y+++I
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           LINCFC+  ++     VLG++++  + P+ VT +SL+ G C   RI EA AL  +     
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 203 ------------HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                       H +F                   C+PD+FTY T++NGLC+ G   +AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L ++M  G  E       + V Y TIID LC    V+ A  LF +M ++ I P+VVTY 
Sbjct: 241 SLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+IR  C    W++A RL  +M+++ + P+VVTFS ++D   K GK+ +A +L + MI R
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            ++P+ +TY++LI+G+C+ D++D A+ +F  M S  C  +VV+YNTLI  +CK K VEE 
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M  + V  D  TY+  +DG
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G + +AL +F  ++ SK E +I +YN +I+G+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 210/395 (53%), Gaps = 12/395 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GDI+L     AL +   M +       V  +  +   L   K+ +  L+LF  +++ G+
Sbjct: 233 RGDIDL-----ALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P++ T++ LI C C  GR S    +L  ++     PN VTF++LI     E +++EA  
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ +    + +PD+FTY++LING C       A ++FE M + +      C PN VTYNT
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNT 400

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G CK   V++  ELF +M    +  + VTY ++I+G   A D + A+++F +M+  G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V PD++T+S+++D LCK GK++KA  + E +    + P+ YTYN +I+G C   K++   
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF S+   G   +V+ Y T+I+ +C+    EEA +L+ EM   G  P   TYNTL    
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
                   + +L  EMR      D  T +  I+ L
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 30/432 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M  M   P  V+   ++ G    NK  + V +L  R+ + G  PD++T+  
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGT 225

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G +     +L ++ +     + V +T++I  LC    + +A  LFT+     
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
             P+V TYN+LI  LC  G    A  L  +M        VV                   
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+  TY+++I+G C    +D+AK +F  M  ++  P+VVTY ++I+GF
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A    E   LF EM  +G+  + VT++ ++  L + G  D A ++ + M+  GV P+ 
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY+ L+DG C   K++ A  +F  ++ +    D+ +YN +I   CK   VE+   L+  
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +  KG+KP V+ Y T+  G       E A  LF EM+ +    ++ TYN  I    + G 
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585

Query: 479 VLEALELFRAIR 490
              + EL + +R
Sbjct: 586 KAASAELIKEMR 597



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 118/237 (49%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A +LF +M      P +V +  ++      N ++    L   M +  +  D+ ++++
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C+  ++  A  +L  M+  G  P+  T ++L++GYC   +I  A  L   M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V++NTLI+    +    EA++L   M+++G +P + TY T+  GL +   ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            L  +M +  + AD   Y   ID LC    V +AL LF  + +     N+V+YN LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 35/206 (16%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+D A  L   M+     P+   +N L+      +K D    L   M++    +D+ SYN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 398 TLI-----------------------------------NWYCKNKDVEEALSLYSEMLSK 422
            LI                                   N YC  K + EA++L  +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
             +P  VT+NTL  GLF  ++   A+ L D M       D +TY   ++GLCK G +  A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           L L + +   K E ++V Y  +ID L
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDAL 265


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 174/442 (39%), Positives = 261/442 (59%), Gaps = 9/442 (2%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK--NKHYDTV 126
           FL  R  S  Q   + I  +  +  F+++LR  P+   +  FN + G L K  N HY T 
Sbjct: 29  FLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIE-FNKILGSLVKSNNNHYPTA 87

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           +SL +RL   G+ PDI+T +ILINC+C M  ++  F ++ +IL+  + P+ +TF +LIKG
Sbjct: 88  ISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKG 147

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC   ++ EA              D F+Y TLINGLC+ G T  AL +  ++       G
Sbjct: 148 LCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID------G 201

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
            + K N V YNTIID LCK   V  A EL+ +M  + I+PDVVT++++I GFC      E
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  LF EM+ + + PD  TF++++D LCK G +  A  +L +M+  GV PN  TY++L+D
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD 321

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GYCL ++++ A+ +  ++   G   +  SY T+IN +CK K V+EALSL+++M  KGI P
Sbjct: 322 GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             VTYN+L  GL +  ++  A +L DEM  N   A+ +TYN  ID LCK+  V +A+ L 
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
           + I+D   + ++ ++N LI GL
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGL 463



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 6/348 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N +   L K+K       L+ ++ +  + PD+ T S LI  FC +G++   F +  
Sbjct: 208 VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFR 267

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     P+  TF  L+  LC E  +  A  +          P+V TY++L++G C   
Sbjct: 268 EMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVN 327

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                +N  + + N   + G    PN  +Y T+I+G CK   VD+A  LF  M+ + I P
Sbjct: 328 Q----VNKAKHVLNTISQMGAA--PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY S+I G C +   + A  L  EM D G   ++ T++ ++D LCKN  +D+A  L+
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  +G+ P+ YT+N LI G C   ++ +A+ +F  + S G   +  +YN ++N  CK 
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE 501

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
              +EA +L S+M   GI P  VTY TL   LF   + E+A KL  EM
Sbjct: 502 GLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 178/337 (52%), Gaps = 9/337 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +A  ++  M+    SP  V+   +++G C+      +    LF+ +    + PD YT +I
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVG--QLEEAFGLFREMVLKNINPDYYTFNI 283

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK G +     +L  +++    PN VT++SL+ G C  +++ +A  +        
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+  +Y T+ING C+      AL+LF +M     +F  +  P+ VTYN++IDGLCK G
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDM-----QFKGIA-PDKVTYNSLIDGLCKSG 397

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A EL  +M D     ++ TY  +I   C  +  ++A  L  ++ DQG+QPD+ TF+
Sbjct: 398 RISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFN 457

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  LCK G++  A  + + ++ +G + N +TYN +++G C     D A  L   M+ N
Sbjct: 458 ILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDN 517

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           G + D V+Y TLI       + E+A  L  EM+++ +
Sbjct: 518 GIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 166/323 (51%), Gaps = 7/323 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M+ +    P   +FNIL   L K  +     ++   +   G+ P++ T+S L
Sbjct: 261 EAFGLFREMV-LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSL 319

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +C + +V+    VL  I +    PNA ++ ++I G C    + EA +LF   +    
Sbjct: 320 MDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI 379

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TYN+LI+GLC++G    A  L +EM + NG+       N  TYN +ID LCK   
Sbjct: 380 APDKVTYNSLIDGLCKSGRISYAWELVDEMHD-NGQ-----PANIFTYNCLIDALCKNHH 433

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD+A  L  K+KD+ I PD+ T+  +I G C       A+ +F +++ +G   +  T+++
Sbjct: 434 VDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LCK G  D+A  LL  M   G+ P+  TY TLI      D+ + A KL   M +  
Sbjct: 494 MVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARD 553

Query: 389 CMHDVVSYNTLINWYCKNKDVEE 411
            ++ +     +++   + KD E+
Sbjct: 554 VVYALEGLEMVLHLESEAKDQEK 576


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/424 (37%), Positives = 258/424 (60%), Gaps = 7/424 (1%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I  ++A+ +F  M+R  P P  V  F+  F  +A  K ++ VL   K++   G+  +IYT
Sbjct: 44  IKEDDAIDLFQEMIRSRPLPSLVD-FSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +I+INCFC+  +    + VLG++++  + P+  TF +LI GLC ES++ EA  L  +  
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C+P+V TYN+++NG+C++G T +AL+L  +M   N       K +  TY+TIID LC
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN------VKADVFTYSTIIDSLC 216

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           ++G +D A  LF +M+ + I   +VTY S++ G C A  WN+  +L  +M  + + P+V+
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI 276

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF+V++D   K GK+ +A+ L + MI +G++PNT TYN+L+DGYC+ +++  A  +   M
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
             N C  D+V++ +LI  YCK K V+E + L+ ++  +G+    VTY+ L  G  +  ++
Sbjct: 337 VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL 396

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E A +LF EM    V  D  TY   +DGLC +G + +ALE+F  ++ SK  L+IV Y  +
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTII 456

Query: 505 IDGL 508
           I+G+
Sbjct: 457 IEGM 460



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 7/226 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++IL     ++   +    LF+ + S G+ PD+ T+ IL++  C  G++     +   +
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +S    + V +T +I+G+C   ++ +A  LF        +P+V TY  +I+GLC+ G  
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 501

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  L  +M     E      PN  TYNT+I    ++G +  + +L  +MK    + D 
Sbjct: 502 SEANILLRKMEEDGNE------PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 555

Query: 289 VTYTSVIRGFCYANDW-NEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +   VI     A  W  E +R       +G Q  ++ F+ I   L
Sbjct: 556 SSIKMVIDMLSSAVWWFKEPRRSPGVKRFRGTQAYLMPFNTITASL 601


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 169/456 (37%), Positives = 266/456 (58%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M++  P P  V  FN L   +AK   +D V+SL +R+ +  +  D+Y+++I
Sbjct: 46  DDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           LINCFC+  ++     VLG++++  + P+ VT +SL+ G C   RI EA AL  +     
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 203 ------------HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                       H +F                   C+PD+FTY T++NGLC+ G   +AL
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L ++M  G  E       + V Y TIID LC    V+ A  LF +M ++ I P+VVTY 
Sbjct: 225 SLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+IR  C    W++A RL  +M+++ + P+VVTFS ++D   K GK+ +A +L + MI R
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            ++P+ +TY++LI+G+C+ D++D A+ +F  M S  C  +VV+YNTLI  +CK K VEE 
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + L+ EM  +G+    VTYNTL  GLF+    + A K+F +M  + V  D  TY+  +DG
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G + +AL +F  ++ SK E +I +YN +I+G+
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 494



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 210/395 (53%), Gaps = 12/395 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GDI+L     AL +   M +       V  +  +   L   K+ +  L+LF  +++ G+
Sbjct: 217 RGDIDL-----ALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P++ T++ LI C C  GR S    +L  ++     PN VTF++LI     E +++EA  
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ +    + +PD+FTY++LING C       A ++FE M + +      C PN VTYNT
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNT 384

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G CK   V++  ELF +M    +  + VTY ++I+G   A D + A+++F +M+  G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V PD++T+S+++D LCK GK++KA  + E +    + P+ YTYN +I+G C   K++   
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 504

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF S+   G   +V+ Y T+I+ +C+    EEA +L+ EM   G  P   TYNTL    
Sbjct: 505 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 564

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
                   + +L  EMR      D  T +  I+ L
Sbjct: 565 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 30/432 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M  M   P  V+   ++ G    NK  + V +L  R+ + G  PD++T+  
Sbjct: 151 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGT 209

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G +     +L ++ +     + V +T++I  LC    + +A  LFT+     
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
             P+V TYN+LI  LC  G    A  L  +M        VV                   
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329

Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+  TY+++I+G C    +D+AK +F  M  ++  P+VVTY ++I+GF
Sbjct: 330 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 389

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A    E   LF EM  +G+  + VT++ ++  L + G  D A ++ + M+  GV P+ 
Sbjct: 390 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 449

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY+ L+DG C   K++ A  +F  ++ +    D+ +YN +I   CK   VE+   L+  
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +  KG+KP V+ Y T+  G       E A  LF EM+ +    ++ TYN  I    + G 
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 569

Query: 479 VLEALELFRAIR 490
              + EL + +R
Sbjct: 570 KAASAELIKEMR 581



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 118/237 (49%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A +LF +M      P +V +  ++      N ++    L   M +  +  D+ ++++
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C+  ++  A  +L  M+  G  P+  T ++L++GYC   +I  A  L   M    
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V++NTLI+    +    EA++L   M+++G +P + TY T+  GL +   ++ AL
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            L  +M +  + AD   Y   ID LC    V +AL LF  + +     N+V+YN LI
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 35/206 (16%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+D A  L   M+     P+   +N L+      +K D    L   M++    +D+ SYN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 398 TLI-----------------------------------NWYCKNKDVEEALSLYSEMLSK 422
            LI                                   N YC  K + EA++L  +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
             +P  VT+NTL  GLF  ++   A+ L D M       D +TY   ++GLCK G +  A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           L L + +   K E ++V Y  +ID L
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDAL 249


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 168/473 (35%), Positives = 270/473 (57%), Gaps = 45/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +E+   +G  ++ L   ++A+ +F  M++  P P  +  F+ L   +AK   +D V+SL 
Sbjct: 49  REKLSRNGLSELKL---DDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLG 104

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           +++ + G+  + YT+SILINCFC+  ++     VLG++++  + PN VT +SL+ G C  
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 191 SRIMEAAALFTK-----------------HRVF------------------ACEPDVFTY 215
            RI EA AL  +                 H +F                   C+PD+ TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTY 224

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             ++NGLC+ G T +A  L  +M  G  E      P  + Y TIIDGLCK   +D A  L
Sbjct: 225 GVVVNGLCKRGDTDLAFILLNKMEQGKLE------PGVLIYTTIIDGLCKNKHMDDALNL 278

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+ + I P+VVTY+S+I   C    W++A RL  +M+++ + PDV TFS ++D   K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A +L + M+ R ++P+  TY++LI+G+C+ D++D A+++F  M S  C  DVVS
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS 398

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+TLI  +CK K V+E + L+ EM  +G+    VTY TL  GLF+    + A ++F EM 
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + V  +  TYN  +DGLCK+G + +A+ +F  ++ SK E  I +YN +I+G+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/361 (34%), Positives = 197/361 (54%), Gaps = 6/361 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   L KNKH D  L+LFK + + G+ P++ T+S LI+C C  GR S    +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+  TF++LI     E +++EA  L+ +    + +P + TY++LING C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +FE M + +      C P+ V+Y+T+I G CK   VD+  ELF +M    +
Sbjct: 374 HDRLDEAKQMFEFMVSKH------CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + VTYT++I+G   A D + A+ +F EM+  GV P+++T++ ++D LCKNGK++KA  
Sbjct: 428 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E +    + P  YTYN +I+G C   K++    LF ++   G   DVV+YNT+I+ +C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    EEA +L+ EM   G  P    YNTL          E + +L  EMR    A D  
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607

Query: 465 T 465
           T
Sbjct: 608 T 608



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 213/438 (48%), Gaps = 42/438 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M      P  V+   ++ G    NK  + V +L  R+ + G  PD+ T+ +
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVAKGCQPDLVTYGV 226

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF------- 200
           ++N  CK G     F++L ++ +    P  + +T++I GLC    + +A  LF       
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286

Query: 201 ------TKHRVFAC----------------------EPDVFTYNTLINGLCRTGHTIVAL 232
                 T   + +C                       PDVFT++ LI+   + G  + A 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L++EM   +        P+ VTY+++I+G C    +D+AK++F  M  ++  PDVV+Y+
Sbjct: 347 KLYDEMVKRS------IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYS 400

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I+GFC A   +E   LF EM  +G+  + VT++ ++  L + G  D A  + + M+  
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD 460

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV PN  TYNTL+DG C   K++ A  +F  ++ +     + +YN +I   CK   VE+ 
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+  +  KG+KP VV YNT+  G       E A  LF EM+ +    ++  YN  I  
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580

Query: 473 LCKSGFVLEALELFRAIR 490
             + G    + EL + +R
Sbjct: 581 RLRDGDREASAELIKEMR 598



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 8/255 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F++M+  H   P V S++ L     K K  D  + LF+ ++  GL  +  T++ 
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI    + G       +   ++     PN +T+ +L+ GLC   ++ +A  +F   +   
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP ++TYN +I G+C+ G      +LF  ++          KP+ V YNT+I G C++G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG------VKPDVVAYNTMISGFCRKG 550

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A  LF +MK++   P+   Y ++IR      D   +  L  EM   G   D  T  
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610

Query: 328 VIMDELCKNGKMDKA 342
           ++ + L  +G++DK+
Sbjct: 611 LVTNML-HDGRLDKS 624


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 187/486 (38%), Positives = 263/486 (54%), Gaps = 53/486 (10%)

Query: 24  FSSSFPHTRK-PTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDI 82
           FSS F H+   P+S+   +  ++P +   L E + L    +  L  F+   CK       
Sbjct: 24  FSSLFTHSPTIPSSNPQISSANHPKSLHALSERISL----QHGLPMFI-HNCKKGN---- 74

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
             IT  +AL  FD M+R       + SFN+L G LAK KHY  V SL+K+++ AGL P+ 
Sbjct: 75  --ITSTQALQFFDLMMR------SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +T +ILINC C + RV  G   +  I+R  + P+ VT+TSLIKGLC E RI EA  LF +
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +   C P+V TY TLI GLCRTG+  +AL L +EM NG   + + CKPN  +YN IID 
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK G   +AK LF +M D+ + PDVVT++++I   C      EAK+    MM +G+ PD
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           + TF+ +++  C  G +D A  L   M  +G  P+  +Y  LI GYC T  ++ A K   
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMK--- 363

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
                                           LY+EML  G  P + T+  L  GLF   
Sbjct: 364 --------------------------------LYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +V  A KLF  ++ + V  + Y  + F+DGLCK+G + EA+ELF  ++    +L+I S+N
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFN 451

Query: 503 CLIDGL 508
           CLIDGL
Sbjct: 452 CLIDGL 457



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 63/142 (44%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +++ H  P  +   ++    L KN      + LF  L S  +  DI + + LI+  CK  
Sbjct: 402 VVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKAR 461

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++   + +  ++ +    P+ VT+  +I G C   ++  A  LF       C P++ TY+
Sbjct: 462 KLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYS 521

Query: 217 TLINGLCRTGHTIVALNLFEEM 238
            L++G  +       + L  +M
Sbjct: 522 ALLHGFYKNNKLEEVVKLLHKM 543


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  317 bits (813), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 173/448 (38%), Positives = 259/448 (57%), Gaps = 14/448 (3%)

Query: 63  RASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK--N 120
           RAS   +L      S   D+N       +  F  MLRM P+P  V  FN + G + K  N
Sbjct: 19  RASFCHYLHPFIPKSNDFDVN-----NDVSSFHRMLRMRPTPSIVE-FNKILGSIVKANN 72

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
            HY T +SL  +L   G+ P I T +IL+NC+C +G ++  F +  +IL+  + P  +TF
Sbjct: 73  NHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITF 132

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            +LI G+C   ++ EA              D  +Y TLINGLC+ G T  AL + +++  
Sbjct: 133 NTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIE- 191

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                G +   + V YN II+ LCK+  V  A +L+ +M  + I+PDVVT+ S+I GFC 
Sbjct: 192 -----GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                EA  LF EM+ + + PDV TFS+++D LCK+G + +A  +L +M+ +GV P+  T
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y++L+DGYCL ++++ A+ +F +M   G      SYN +IN   K K V+EALSL+ EM 
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC 366

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            KGI P  VTYN+L  GL ++ ++  A +L DEM  N + AD  TYN+ ID LCK+  + 
Sbjct: 367 CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           +A+ L + I+D   + ++ +YN LIDGL
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGL 454



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 223/419 (53%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  IF  +L++   P  ++ FN L   +  N      L     + + G   D  ++  LI
Sbjct: 113 AFSIFAKILKLGYHPTTIT-FNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CK+G       +L +I       + V +  +I  LC +  + +A  L+++       
Sbjct: 172 NGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV T+N+LI G C  G    A  LF EM   N        P+  T++ ++D LCK+G +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN------INPDVYTFSILVDALCKDGNI 285

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +AK +   M  + + PDVVTY+S++ G+C  N+ N+AK +F  M   GV P   +++++
Sbjct: 286 TRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIM 345

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ L K   +D+A  L + M  +G+ P+T TYN+LIDG C   +I +A +L   M +NG 
Sbjct: 346 INGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D+++YN+LI+  CKN  +++A++L  ++  +GI+P++ TYN L  GL +  +++ A  
Sbjct: 406 PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD 465

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F ++     + + +TYN  I+GLCK G   EA  L   + ++    + V+Y  +I  L
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 182/348 (52%), Gaps = 6/348 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +NI+   L K+K       L+  + +  + PD+ T + LI  FC +G++   F +  
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     P+  TF+ L+  LC +  I  A  +          PDV TY++L++G C   
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A ++F  M+      GV   P+  +YN +I+GL K   VD+A  LF +M  + I P
Sbjct: 319 EVNKAKHVFSTMS----RLGVA--PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY S+I G C     + A +L  EM + G+  D++T++ ++D LCKN  +DKA  L+
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  +G+ P+ YTYN LIDG C   ++ +A+ +F  +   G   +  +YN +IN  CK 
Sbjct: 433 KKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKE 492

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
               EA  L S+M + GI P  VTY T+   LF   + E+A KL  EM
Sbjct: 493 GLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 174/323 (53%), Gaps = 12/323 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L               LF  +    + PD+YT SIL++  CK G ++    +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    P+ VT++SL+ G C  + + +A  +F+        P   +YN +INGL +
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                 AL+LF+EM          CK   P+TVTYN++IDGLCK G +  A +L  +M +
Sbjct: 352 IKMVDEALSLFKEMC---------CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHN 402

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             I  D++TY S+I   C  +  ++A  L  ++ DQG+QP + T+++++D LCK G++  
Sbjct: 403 NGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKN 462

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  + + ++ +G + N +TYN +I+G C     + A  L   ME+NG + D V+Y T+I 
Sbjct: 463 AQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIR 522

Query: 402 WYCKNKDVEEALSLYSEMLSKGI 424
              +  + E+A  L  EM+ +G+
Sbjct: 523 ALFRKDENEKAEKLLREMIIRGL 545



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 154/302 (50%), Gaps = 7/302 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M+ +    P V +F+IL   L K+ +     ++   +   G+ PD+ T+S L
Sbjct: 252 EAFGLFHEMV-LKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSL 310

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +C +  V+    V   + R    P+A ++  +I GL     + EA +LF +      
Sbjct: 311 MDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI 370

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TYN+LI+GLC+ G    A  L +EM N NG        + +TYN++ID LCK   
Sbjct: 371 APDTVTYNSLIDGLCKLGRISYAWQLVDEMHN-NG-----IPADILTYNSLIDVLCKNHH 424

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA  L  K+KD+ I P + TY  +I G C       A+ +F +++ +G   +  T+++
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LCK G  ++A  LL  M   G+ P+  TY T+I      D+ + A KL   M   G
Sbjct: 485 MINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544

Query: 389 CM 390
            +
Sbjct: 545 LL 546


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 168/421 (39%), Positives = 253/421 (60%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP +  FN +    AK KHY T +SL  RL   G+ PD+ T +I
Sbjct: 41  DDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC MG+++ GF VL +IL+  + P+ VT  +LIKGLC + ++ +A     K     
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +Y TLING+C+ G T  A+    ++       G + KP+ V YNTIID +CK  
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKID------GRLTKPDVVMYNTIIDAMCKYQ 213

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ DVVTY ++I GFC      EA  L  EM+ + + P+V T++
Sbjct: 214 LVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK GK+ +A  +L +M+   V P+  TY+TL+DGY L  ++  A+ +F +M   
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV +Y  LIN +CKNK V+EAL+L+ EM  K + P +VTY++L  GL +  ++   
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L DEMR     AD  TY++ IDGLCK+G +  A+ LF  ++D +   NI ++  L+DG
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453

Query: 508 L 508
           L
Sbjct: 454 L 454



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 206/405 (50%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N L   L         L    +L + G   +  +++ LIN  CK+G       
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIK 185

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            L +I      P+ V + ++I  +C    + EA  LF++  V     DV TYNTLI G C
Sbjct: 186 FLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFC 245

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A+ L  EM            PN  TYN ++D LCKEG V +AK +   M    
Sbjct: 246 IVGKLKEAIGLLNEMVLKT------INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDV+TY++++ G+    +  +A+ +F  M   GV PDV T++++++  CKN  +D+A 
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M  + + P   TY++LIDG C + +I +   L   M   G   DV++Y++LI+  
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CKN  ++ A++L+++M  + I+P + T+  L  GL +  +++ A ++F ++       + 
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YTYN  I+G CK G + EAL +   + D+    N  ++  +I  L
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 187/352 (53%), Gaps = 6/352 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  +N +   + K +       LF  +   G+  D+ T++ LI  FC +G++    
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     PN  T+  L+  LC E ++ EA ++         +PDV TY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                   A ++F  M+      GV   P+  TY  +I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ P +VTY+S+I G C +   +    L  EM D+G   DV+T+S ++D LCKNG +D+A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L   M  + + PN +T+  L+DG C   ++  A+++F  + + G   +V +YN +IN 
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +CK   +EEAL++ S+M   G  P   T+ T+ + LF+  + ++A KL  +M
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 165/285 (57%), Gaps = 6/285 (2%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++YT++IL++  CK G+V     VL  +L++C  P+ +T+++L+ G      + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F    +    PDV TY  LING C+      ALNLF+EM   N        P  VTY+++
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSL 380

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLCK G +    +L  +M+D     DV+TY+S+I G C     + A  LF +M DQ +
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P++ TF++++D LCK G++  A  + + ++ +G + N YTYN +I+G+C    ++ A  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +   ME NGC+ +  ++ T+I    K  + ++A  L  +M+++G+
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M      P ++ +  ++  F     ++ A  L   +  +G+QPD++T ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C  G++     +L  ++ RG  P+T T NTLI G CL  ++  A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 389 -----------------------------------CMHDVVSYNTLINWYCKNKDVEEAL 413
                                                 DVV YNT+I+  CK + V EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+SEM  KGI   VVTYNTL  G   + +++ A+ L +EM    +  + YTYN  +D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G V EA  +   +  +  + ++++Y+ L+DG
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 168/419 (40%), Positives = 243/419 (57%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+  FD ML M P PPP   FN +   L  NKHY TV+SLFK+  S G  PD+ T +IL+
Sbjct: 47  AVASFDRMLLMRP-PPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILM 105

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NCFC +  ++  F VL  IL+  + PNA+T  +LIKGLC    I +A     +      +
Sbjct: 106 NCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQ 165

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            +  +Y TLINGLC+TG T     L  ++       G   KP+ V YNTII  LCK   +
Sbjct: 166 LNQVSYRTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIIHSLCKNKLL 219

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A +L+ +M  + I+P+VVTY +++ GFC      EA  L  EM  + + PDV TF+ +
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTL 279

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GKM  A  +L +M+   + P+  TYN+LIDGY   +K+ +A+ +F SM  +G 
Sbjct: 280 IDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGV 339

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +V +Y T+I+  CK K V+EA+SL+ EM  K + P +VTY +L  GL + H +ERA+ 
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L  +M+   +  D Y+Y   +D LCK G +  A E F+ +    Y LN+ +YN +I+GL
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGL 458



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 150/435 (34%), Positives = 224/435 (51%), Gaps = 31/435 (7%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L  H   P V  +N +   L KNK       L+  +   G+ P++ T++ L+  FC MG 
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGH 253

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC-EPDVFTYN 216
           +   F +L  +      P+  TF +LI  L  E + M+AA +     + AC +PDV TYN
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK-MKAAKIVLAVMMKACIKPDVVTYN 312

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +LI+G         A  +F  MA      GV   PN  TY T+IDGLCKE  VD+A  LF
Sbjct: 313 SLIDGYFFLNKVKNAKYVFYSMAQS----GVT--PNVRTYTTMIDGLCKEKMVDEAMSLF 366

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +MK +N+ PD+VTYTS+I G C  +    A  L  +M +QG+QPDV ++++++D LCK 
Sbjct: 367 EEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A    + ++ +G + N  TYN +I+G C  D    A  L   ME  GCM D +++
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKG-----------------------IKPTVVTYNT 433
            T+I    +  + ++A  +  EM+++G                       IKP VVTY T
Sbjct: 487 KTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGT 546

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G F +++++ A  +F  M +  V  +   Y   IDGLCK   V EA+ LF  ++   
Sbjct: 547 LMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKN 606

Query: 494 YELNIVSYNCLIDGL 508
              NIV+Y  LID L
Sbjct: 607 MFPNIVTYTSLIDAL 621



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/427 (33%), Positives = 227/427 (53%), Gaps = 29/427 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L K         +   +  A + PD+ T++ LI+ +  + +V +   V
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYV 330

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +S  TPN  T+T++I GLC E  + EA +LF + +     PD+ TY +LI+GLC+
Sbjct: 331 FYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   A+ L ++M     E G+  +P+  +Y  ++D LCK G ++ AKE F ++  +  
Sbjct: 391 NHHLERAIALCKKMK----EQGI--QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGY 444

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + +V TY  +I G C A+ + EA  L  +M  +G  PD +TF  I+  L +  + DKA +
Sbjct: 445 HLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEK 504

Query: 345 LLELMIWRG-----------------------VNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +L  MI RG                       + P+  TY TL+DGY L +++ HA+ +F
Sbjct: 505 ILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVF 564

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            SM   G   +V  Y  +I+  CK K V+EA+SL+ EM  K + P +VTY +L   L + 
Sbjct: 565 YSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKN 624

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
           H +ERA+ L  EM+ + +  D Y+Y   +DGLCKSG +  A E+F+ +    Y LN+  Y
Sbjct: 625 HHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVY 684

Query: 502 NCLIDGL 508
             +I+ L
Sbjct: 685 TAMINEL 691



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 18/384 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F+ M +     P + ++  L   L KN H +  ++L K++   G+ PD+Y+++I
Sbjct: 360 DEAMSLFEEM-KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR+ +      R+L   +  N  T+  +I GLC      EA  L +K     
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVV----------------CK 250
           C PD  T+ T+I  L        A  +  EM A G  E   V                 K
Sbjct: 479 CMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIK 538

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ VTY T++DG      +  AK +F  M    + P+V  YT +I G C     +EA  L
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM  + + P++VT++ ++D LCKN  +++A  LL+ M   G+ P+ Y+Y  L+DG C 
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           + +++ A+++F  +   G   +V  Y  +IN  CK    +EAL L  +M  KG  P  VT
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718

Query: 431 YNTLFLGLFEIHQVERALKLFDEM 454
           ++ +   LFE  + ++A K+  EM
Sbjct: 719 FDIIIWALFEKDENDKAEKILXEM 742



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 142/309 (45%), Gaps = 29/309 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF-------------- 152
           V ++N++   L K   +   + L  ++   G  PD  T   +I                 
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507

Query: 153 ---------CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
                     +  R+    +VL  + ++C  P+ VT+ +L+ G    + +  A  +F   
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 P+V  Y  +I+GLC+      A++LFEEM + N        PN VTY ++ID L
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKN------MFPNIVTYTSLIDAL 621

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK   +++A  L  +MK+  I PDV +YT ++ G C +     AK +F  ++ +G   +V
Sbjct: 622 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
             ++ +++ELCK G  D+A  L   M  +G  P+  T++ +I      D+ D A K+   
Sbjct: 682 QVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXE 741

Query: 384 MESNGCMHD 392
           M + G M +
Sbjct: 742 MIARGLMKE 750


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/404 (39%), Positives = 245/404 (60%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+  F  + G L K KHY TV+SL K++ + G+ PD+ T SILINCFC +G+++  F V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG+IL+  + PN +   +L+KGLC +  + ++     K      + D  +Y  L+NGLC+
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A+ L   + + +       +P+ V Y+TIIDGLCK+  VD+A +L+ +M    I
Sbjct: 128 IGETRCAIKLLRTIEDRS------TRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TYT++I GFC A    EA  L  EM+ + + P++ T++ ++D LCK GK+ ++  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL +M  +GV P+   Y+ L+DGYCL  ++  A+++F+ M   G   DV SYN +IN  C
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K V+EA++L  EML K + P  VTY++L  GL ++ ++   L L  EM      A+  
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +DGLCK+  + +A+ LF  +++   + N  +Y  LIDGL
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 212/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P     N L   L         L    ++ + G   D  ++ IL+N  CK+G       +
Sbjct: 78  PNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKL 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      P+ V ++++I GLC +  + EA  L+++       PDV TY TLI G C 
Sbjct: 138 LRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCL 197

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L  EM   N        PN  TYNT+ID LCKEG V ++K L   M  + +
Sbjct: 198 AGQLMEAFGLLNEMILKN------INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVV Y+ ++ G+C   +  +AK++F+ M+  GV PDV ++++I++ LCK  ++D+A  
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMN 311

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+ + + P+T TY++LIDG C   +I     L   M   G   ++V+YN+L++  C
Sbjct: 312 LLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLC 371

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN+++++A++L+ +M  +GI+P   TY  L  GL +  ++++   LF  +       D +
Sbjct: 372 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW 431

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I GLCK G   EAL +   + D+    N V++  +I  L
Sbjct: 432 TYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 186/365 (50%), Gaps = 10/365 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+K  D    L+  +N+ G+FPD+ T++ LI  FC  G++   F +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN  T+ +LI  LC E ++ E+  L         +PDV  Y+ L++G C 
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +F  M     + GV   P+  +YN II+GLCK   VD+A  L  +M  +N+
Sbjct: 268 VGEVQKAKQIFLVMV----QTGV--NPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+S+I G C          L  EM  +G   ++VT++ ++D LCKN  +DKA  
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  RG+ PN YTY  LIDG C   ++   + LF  +   G   DV +Y  +I+  C
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLC 441

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EAL++ S+M   G  P  VT+  +   L E  + ++A KL  EM    +A    
Sbjct: 442 KEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM----IAKGLL 497

Query: 465 TYNNF 469
            + NF
Sbjct: 498 PFRNF 502



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 93  IFDYMLRMH--PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           I D    MH    P  + ++N L   L KN++ D  ++LF ++   G+ P+ YT++ LI+
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GR+  G  +   +L   +  +  T+T +I GLC E    EA A+ +K     C P
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIP 463

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEM 238
           +  T+  +I  L        A  L  EM
Sbjct: 464 NAVTFEIIIRSLLEKDENDKAEKLLHEM 491


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 168/424 (39%), Positives = 244/424 (57%), Gaps = 15/424 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ M+R+ P PPP S F+ L G + +  HY T +SLF +L S G+ P I T +I
Sbjct: 37  DDAVTCFNRMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA----AALFTKH 203
           LINC+      +  F +L  IL+S + PN VTF ++I G C    I +A      L  + 
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            +F    D FTY TLINGL + G    AL+L +EM   +       +PN V Y+ +IDGL
Sbjct: 156 YLF----DQFTYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGL 205

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK+GFV  A  L  ++ +  I  D VTY S+I G C    W E  +L  +M+ + V PD 
Sbjct: 206 CKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            TF++++D LCK G++ +A  +L +M  RG  P+  TYN L++GYC  + +  AR+LF  
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   DV++YN LI+ YCK K V+EA+ L+ E+ +K + PT+ +YN+L  GL    +
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +    KL DEM  +    D  TYN  ID LCK G +LEAL +   +     + NIV+YN 
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445

Query: 504 LIDG 507
           ++DG
Sbjct: 446 MMDG 449



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  ++ L   L K+      L L  ++   G+  D  T++ LI+  C +GR      +
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++R    P+  TF  LI  LC E RI+EA  +         +PD+ TYN L+ G C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A  LF  M     E      P+ + YN +IDG CK   VD+A  LF ++ ++N+
Sbjct: 313 RENVHEARELFNRMVKRGLE------PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P + +Y S+I G C +   +  K+L  EM      PDVVT+++++D LCK G++ +A  
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L +M+ +GV PN  TYN ++DGYCL + ++ A+ +F  M  +G   D+++YN LIN YC
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K + V+EA+ L+ EM  K + P + +YN+L  GL  + ++    +L DEM  +  + D  
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           TYN  +D  CK+    +A+ LFR I
Sbjct: 547 TYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L+KN      L L + +  + + P++  +S LI+  CK G VS    +  +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  +AVT+ SLI G C+  R  E   L TK      +PD +T+N LI+ LC+ G  
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A  +   M+   GE     KP+ VTYN +++G C    V +A+ELF +M    + PDV
Sbjct: 282 LEAQGVLAMMSK-RGE-----KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           + Y  +I G+C     +EA  LF E+ ++ + P + +++ ++D LC +G++    +LL+ 
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M      P+  TYN LID  C   +I  A  + V M   G   ++V+YN +++ YC   +
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V  A  +++ M+  G++P ++ YN L  G  +   V+ A+ LF EMR  ++  D  +YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            IDGLC  G +    EL   + DS    ++++YN L+D 
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDA 554



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 219/420 (52%), Gaps = 31/420 (7%)

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           GC +  + +  V  L  ++    + PD YT +ILI+  CK GR+     VL  + +    
Sbjct: 239 GCCSVGR-WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+ VT+ +L++G C+   + EA  LF +      EPDV  YN LI+G C+T     A+ L
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357

Query: 235 FEEMANGN------------------GEFGVVCK-----------PNTVTYNTIIDGLCK 265
           F+E+ N N                  G    V K           P+ VTYN +ID LCK
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG + +A  + + M  + + P++VTY +++ G+C  N+ N AK +F  M+  G++PD++ 
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++V+++  CK   +D+A  L + M  + + P+  +YN+LIDG C   +I H ++L   M 
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +G   DV++YN L++ +CK +  ++A+SL+ +++ +GI P   T + +   L +  +++
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLK 596

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A      +  +  + +  TY   I+ LCK G   EA+ L   + D+    + +++  +I
Sbjct: 597 MAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 165/320 (51%), Gaps = 7/320 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P ++S+N L   L  +     V  L   ++ +   PD+ T++ILI+  CK GR+     V
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    PN VT+ +++ G C  + +  A  +F +      EPD+  YN LING C+
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T     A+ LF+EM + N        P+  +YN++IDGLC  G +   +EL  +M D   
Sbjct: 488 TEMVDEAIVLFKEMRHKN------LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV+TY  ++  FC    +++A  LF +++ +G+ PD  T   I+D LCK  K+  A  
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ ++  G +PN  TY  LI+  C       A  L   ME N    D +++  +I    
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660

Query: 405 KNKDVEEALSLYSEMLSKGI 424
           +  + ++A  L  EM+++G+
Sbjct: 661 QRNETDKAEKLREEMIARGL 680



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 9/307 (2%)

Query: 99  RMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
            MH S  PP V ++NIL   L K       L +   +   G+ P+I T++ +++ +C   
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            V+    +  R+++S   P+ + +  LI G C    + EA  LF + R     PD+ +YN
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYN 514

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +LI+GLC  G       L +EM + +G+      P+ +TYN ++D  CK    DKA  LF
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCD-SGQ-----SPDVITYNILLDAFCKTQPFDKAISLF 568

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            ++  E I PD  T  +++   C       A+     ++  G  P+V T++++++ LCK+
Sbjct: 569 RQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKD 627

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G   +A  LL  M      P+  T+  +I      ++ D A KL   M + G ++   S 
Sbjct: 628 GSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSL 687

Query: 397 NTLINWY 403
           N   N +
Sbjct: 688 NQSHNVF 694


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 163/421 (38%), Positives = 251/421 (59%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  + P +  F  + G L K KH+ T +SL K++   G+ PD+ T SI
Sbjct: 114 HDAVSQFNGMLLMR-NTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +G+++  F VLG+IL+  + PN +  T+L+KGLC +  + ++     K     
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +Y TL+NGLC+ G T  A+ L   + + +       +P+ V YNTIIDGLCK+ 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS------TRPDVVMYNTIIDGLCKDK 286

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A + + +M    I PDV+TY+++I GFC A     A  L  EM  + + PDV T++
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK GK+ +A  LL +M   GV PN  TY+TL+DGYCL  ++ +A+++F +M   
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                V SYN +IN  CK K V+EA++L  EML K + P  VTYN+L  GL +  ++  A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L L  E+      AD  TY + +DGLCK+  + +A+ LF  +++   + N  +Y  LIDG
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526

Query: 508 L 508
           L
Sbjct: 527 L 527



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 207/382 (54%), Gaps = 6/382 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L    ++ + G   +  ++  L+N  CK+G       +L  I      P+ V + ++I G
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC +  + EA   +T+       PDV TY+TLI G C  G  + A +L  EM   N    
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN---- 337

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               P+  TY  +ID LCKEG + +AK L   M  E + P+VVTY++++ G+C   + + 
Sbjct: 338 --INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHN 395

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK++F  M+   V P V +++++++ LCK   +D+A  LL  M+ + V PNT TYN+LID
Sbjct: 396 AKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLID 455

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C + +I  A  L   +   G   DV++Y +L++  CKN+++++A++L+ +M  +GI+P
Sbjct: 456 GLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQP 515

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              TY  L  GL +  +++ A KLF  +       D YTYN  I GLCK G + EAL + 
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             + D+    + V++  +I  L
Sbjct: 576 SKMEDNGCIPDAVTFEIIIRSL 597



 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+    + P V  +N +   L K+K  +     +  +NS G+FPD+ T+S LI  FC  G
Sbjct: 262 MIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAG 321

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++   F +L  +      P+  T+T LI  LC E ++ EA  L         +P+V TY+
Sbjct: 322 QLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYS 381

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TL++G C  G    A  +F  M            P+  +YN +I+GLCK   VD+A  L 
Sbjct: 382 TLMDGYCLVGEVHNAKQIFHAMVQTE------VNPSVCSYNIMINGLCKGKSVDEAMNLL 435

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M  +N+ P+ VTY S+I G C +     A  L  E+  +G   DV+T++ ++D LCKN
Sbjct: 436 REMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
             +DKA  L   M  RG+ PN YTY  LIDG C   ++ +A+KLF  +   GC  DV +Y
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTY 555

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N +I   CK   ++EAL++ S+M   G  P  VT+  +   LFE  + ++A KL  EM  
Sbjct: 556 NVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM-- 613

Query: 457 NHVAADTYTYNNF 469
             +A     + NF
Sbjct: 614 --IAKGLLHFRNF 624



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 102/278 (36%), Gaps = 86/278 (30%)

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG--------- 367
           +G+ P++VT S++++ L   G+M  +  +L  ++  G  PN+ T  TL+ G         
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLP 64

Query: 368 -----------YCLTDKIDHARKL-----------FVSMESNGCMHDVV----------- 394
                        L+  + H+              F        +HDVV           
Sbjct: 65  RMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGML 124

Query: 395 ---------SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN------------- 432
                     +  ++    K K    A+SL  +M  KGI+P +VT +             
Sbjct: 125 LMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMA 184

Query: 433 ----------------------TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
                                 TL  GL    +V+++L   D++       +  +Y   +
Sbjct: 185 FSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLL 244

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +GLCK G    A++L R I D     ++V YN +IDGL
Sbjct: 245 NGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 174/473 (36%), Positives = 265/473 (56%), Gaps = 46/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           KER ++ G  DI +   N+A+ +F+ M++  P P P+  FN L   +A+ K YD VL   
Sbjct: 68  KERLRN-GIVDIKV---NDAIDLFESMIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFC 122

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K +   G+  D+YT +I+INC+C+  ++   F VLGR  +  + P+ +TF++L+ G C E
Sbjct: 123 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 182

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLC--------------------------- 223
            R+ EA AL  +       PD+ T +TLINGLC                           
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 224 --------RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
                   ++G++ +AL+LF +M   N       K + V Y+ +ID LCK+G  D A  L
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 296

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+ + I  DVVTY+S+I G C    W++  ++  EM+ + + PDVVTFS ++D   K
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A  L   MI RG+ P+T TYN+LIDG+C  + +  A ++F  M S GC  D+V+
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+ LIN YCK K V++ + L+ E+ SKG+ P  +TYNTL LG  +  ++  A +LF EM 
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              V     TY   +DGLC +G + +ALE+F  ++ S+  L I  YN +I G+
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 217/421 (51%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D M+     P  V+ +  +   L K+ +    L LF+++    +   +  +SI
Sbjct: 221 SEALVLIDRMVEYGFQPDEVT-YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 279

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK G       +   +       + VT++SLI GLC + +  + A +  +     
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV T++ LI+   + G  + A  L+ EM       G+   P+T+TYN++IDG CKE 
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT----RGIA--PDTITYNSLIDGFCKEN 393

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A ++F  M  +   PD+VTY+ +I  +C A   ++  RLF E+  +G+ P+ +T++
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C++GK++ A  L + M+ RGV P+  TY  L+DG C   +++ A ++F  M+ +
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                +  YN +I+  C    V++A SL+  +  KG+KP VVTYN +  GL +   +  A
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF +M+ +    D +TYN  I        ++ ++EL   ++   +  +  +   +ID 
Sbjct: 574 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 633

Query: 508 L 508
           L
Sbjct: 634 L 634


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 169/421 (40%), Positives = 254/421 (60%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP +  FN +    AK KHY T +SL  RL   G+ PD+ T +I
Sbjct: 41  DDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC MG+++ GF VL +IL+  + P+ VT  +LIKGLC + ++ +A     K     
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +Y TLING+C+ G T  A+ L  ++       G + KPN   Y+TIID LCK  
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQ 213

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ DVVTY+++I GFC      EA  L  EM+ + + P+V T++
Sbjct: 214 LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK GK+ +A  +L +M+   V P+  TY+TL+DGY L  ++  A+ +F +M   
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV +Y  LIN +CKNK V+EAL+L+ EM  K + P +VTY++L  GL +  ++   
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L DEMR     AD  TY++ IDGLCK+G +  A+ LF  ++D +   NI ++  L+DG
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453

Query: 508 L 508
           L
Sbjct: 454 L 454



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 207/405 (51%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N L   L         L    +L + G   +  +++ LIN  CK+G       
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 185

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L +I      PN   ++++I  LC    + EA  LF++  V     DV TY+TLI G C
Sbjct: 186 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 245

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A+ L  EM            PN  TYN ++D LCKEG V +AK +   M    
Sbjct: 246 IEGKLKEAIGLLNEMVLKT------INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDV+TY++++ G+    +  +A+ +F  M   GV PDV T++++++  CKN  +D+A 
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M  + + P   TY++LIDG C + +I +   L   M   G   DV++Y++LI+  
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL 419

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CKN  ++ A++L+++M  + I+P + T+  L  GL +  +++ A ++F ++       + 
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YTYN  I+G CK G + EAL +   + D+    N  ++  +I  L
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 185/337 (54%), Gaps = 7/337 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M     S   V+   +++G   + K  + +  L   +    + P++YT++I
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI-GLLNEMVLKTINPNVYTYNI 274

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK G+V     VL  +L++C  P+ +T+++L+ G      + +A  +F    +  
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV TY  LING C+      ALNLF+EM   N        P  VTY+++IDGLCK G
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSLIDGLCKSG 388

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +    +L  +M+D     DV+TY+S+I G C     + A  LF +M DQ ++P++ TF+
Sbjct: 389 RIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK G++  A  + + ++ +G + N YTYN +I+G+C    ++ A  +   ME N
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN 508

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           GC+ +  ++ T+I    K  + ++A  L  +M+++G+
Sbjct: 509 GCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 185/352 (52%), Gaps = 6/352 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  ++ +   L K +       LF  +   G+  D+ T+S LI  FC  G++    
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     PN  T+  L+  LC E ++ EA ++         +PDV TY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                   A ++F  M+      GV   P+  TY  +I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ P +VTY+S+I G C +        L  EM D+G   DV+T+S ++D LCKNG +D+A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L   M  + + PN +T+  L+DG C   ++  A+++F  + + G   +V +YN +IN 
Sbjct: 429 IALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +CK   +EEAL++ S+M   G  P   T+ T+ + LF+  + ++A KL  +M
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 186/363 (51%), Gaps = 6/363 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           + L ++++     P++  +S +I+  CK   VS  + +   +     + + VT+++LI G
Sbjct: 184 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
            C E ++ EA  L  +  +    P+V+TYN L++ LC+ G    A ++   M        
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA----- 298

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              KP+ +TY+T++DG      V KA+ +F  M    + PDV TYT +I GFC     +E
Sbjct: 299 -CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  LF EM  + + P +VT+S ++D LCK+G++     L++ M  RG   +  TY++LID
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLID 417

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C    +D A  LF  M+      ++ ++  L++  CK   +++A  ++ ++L+KG   
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHL 477

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V TYN +  G  +   +E AL +  +M  N    + +T+   I  L K     +A +L 
Sbjct: 478 NVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLL 537

Query: 487 RAI 489
           R +
Sbjct: 538 RQM 540



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M      P ++ +  ++  F     ++ A  L   +  +G+QPD++T ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C  G++     +L  ++ RG  P+T T NTLI G CL  ++  A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 389 CMHDVVSYNTLINWYCKNKD-----------------------------------VEEAL 413
              + VSY TLIN  CK  D                                   V EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+SEM  KGI   VVTY+TL  G     +++ A+ L +EM    +  + YTYN  +D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G V EA  +   +  +  + ++++Y+ L+DG
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  314 bits (805), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 174/473 (36%), Positives = 265/473 (56%), Gaps = 46/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           KER ++ G  DI +   N+A+ +F+ M++  P P P+  FN L   +A+ K YD VL   
Sbjct: 39  KERLRN-GIVDIKV---NDAIDLFESMIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFC 93

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K +   G+  D+YT +I+INC+C+  ++   F VLGR  +  + P+ +TF++L+ G C E
Sbjct: 94  KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLC--------------------------- 223
            R+ EA AL  +       PD+ T +TLINGLC                           
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 224 --------RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
                   ++G++ +AL+LF +M   N       K + V Y+ +ID LCK+G  D A  L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+ + I  DVVTY+S+I G C    W++  ++  EM+ + + PDVVTFS ++D   K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A  L   MI RG+ P+T TYN+LIDG+C  + +  A ++F  M S GC  D+V+
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+ LIN YCK K V++ + L+ E+ SKG+ P  +TYNTL LG  +  ++  A +LF EM 
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              V     TY   +DGLC +G + +ALE+F  ++ S+  L I  YN +I G+
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 215/421 (51%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D M+     P  V+ +  +   L K+ +    L LF+++    +   +  +SI
Sbjct: 192 SEALVLIDRMVEYGFQPDEVT-YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK G       +   +       + VT++SLI GLC + +  + A +  +     
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV T++ LI+   + G  + A  L+ EM            P+T+TYN++IDG CKE 
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG------IAPDTITYNSLIDGFCKEN 364

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A ++F  M  +   PD+VTY+ +I  +C A   ++  RLF E+  +G+ P+ +T++
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C++GK++ A  L + M+ RGV P+  TY  L+DG C   +++ A ++F  M+ +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                +  YN +I+  C    V++A SL+  +  KG+KP VVTYN +  GL +   +  A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF +M+ +    D +TYN  I        ++ ++EL   ++   +  +  +   +ID 
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604

Query: 508 L 508
           L
Sbjct: 605 L 605


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  314 bits (805), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 168/424 (39%), Positives = 244/424 (57%), Gaps = 15/424 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ M+R+ P PPP S F+ L G + +  HY T +SLF +L S G+ P I T +I
Sbjct: 37  DDAVTCFNRMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA----AALFTKH 203
           LINC+      +  F +L  IL+S + PN VTF ++I G C    I +A      L  + 
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            +F    D FTY TLINGL + G    AL+L +EM   +       +PN V Y+ +IDGL
Sbjct: 156 YLF----DQFTYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGL 205

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK+GFV  A  L  ++ +  I  D VTY S+I G C    W E  +L  +M+ + V PD 
Sbjct: 206 CKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD 265

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            TF++++D LCK G++ +A  +L +M  RG  P+  TYN L++GYC  + +  AR+LF  
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNR 325

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   DV++YN LI+ YCK K V+EA+ L+ E+ +K + PT+ +YN+L  GL    +
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +    KL DEM  +    D  TYN  ID LCK G +LEAL +   +     + NIV+YN 
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445

Query: 504 LIDG 507
           ++DG
Sbjct: 446 MMDG 449



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  ++ L   L K+      L L  ++   G+  D  T++ LI+  C +GR      +
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++R    P+  TF  LI  LC E RI+EA  +         +PD+ TYN L+ G C 
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A  LF  M     E      P+ + YN +IDG CK   VD+A  LF ++ ++N+
Sbjct: 313 RENVHEARELFNRMVKRGLE------PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P + +Y S+I G C +   +  K+L  EM      PDVVT+++++D LCK G++ +A  
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L +M+ +GV PN  TYN ++DGYCL + ++ A+ +F  M  +G   D+++YN LIN YC
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K + V+EA+ L+ EM  K + P + +YN+L  GL  + ++    +L DEM  +  + D  
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           TYN  +D  CK+    +A+ LFR I
Sbjct: 547 TYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L+KN      L L + +  + + P++  +S LI+  CK G VS    +  +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  +AVT+ SLI G C+  R  E   L TK      +PD +T+N LI+ LC+ G  
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A  +   M+   GE     KP+ VTYN +++G C    V +A+ELF +M    + PDV
Sbjct: 282 LEAQGVLAMMSK-RGE-----KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           + Y  +I G+C     +EA  LF E+ ++ + P + +++ ++D LC +G++    +LL+ 
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M      P+  TYN LID  C   +I  A  + V M   G   ++V+YN +++ YC   +
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V  A  +++ M+  G++P ++ YN L  G  +   V+ A+ LF EMR  ++  D  +YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            IDGLC  G +    EL   + DS    ++++YN L+D 
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDA 554



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 224/428 (52%), Gaps = 31/428 (7%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+  +++ GC +  + +  V  L  ++    + PD YT +ILI+  CK GR+     VL 
Sbjct: 231 VTYNSLIDGCCSVGR-WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + +    P+ VT+ +L++G C+   + EA  LF +      EPDV  YN LI+G C+T 
Sbjct: 290 MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTK 349

Query: 227 HTIVALNLFEEMANGN------------------GEFGVVCK-----------PNTVTYN 257
               A+ LF+E+ N N                  G    V K           P+ VTYN
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +ID LCKEG + +A  + + M  + + P++VTY +++ G+C  N+ N AK +F  M+  
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKS 469

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G++PD++ ++V+++  CK   +D+A  L + M  + + P+  +YN+LIDG C   +I H 
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           ++L   M  +G   DV++YN L++ +CK +  ++A+SL+ +++ +GI P   T + +   
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDN 588

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  +++ A      +  +  + +  TY   I+ LCK G   EA+ L   + D+    +
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648

Query: 498 IVSYNCLI 505
            +++  +I
Sbjct: 649 AITFEIII 656



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 190/367 (51%), Gaps = 8/367 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M++     P V ++N+L     K K  D  + LFK L +  L P I +++ 
Sbjct: 317 HEARELFNRMVK-RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  GR+SH   +L  +  S   P+ VT+  LI  LC E RI+EA  +        
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P++ TYN +++G C   +  VA ++F  M     E      P+ + YN +I+G CK  
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDILNYNVLINGYCKTE 489

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A  LF +M+ +N+ PD+ +Y S+I G C        + L  EM D G  PDV+T++
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK    DKA  L    I  G+ P+ YT + ++D  C  +K+  A      +  +
Sbjct: 550 ILLDAFCKTQPFDKAISLFR-QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  +V +Y  LIN  CK+    EA+ L S+M      P  +T+  +   L + ++ ++A
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668

Query: 448 LKLFDEM 454
            KL +EM
Sbjct: 669 EKLREEM 675



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 165/320 (51%), Gaps = 7/320 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P ++S+N L   L  +     V  L   ++ +   PD+ T++ILI+  CK GR+     V
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    PN VT+ +++ G C  + +  A  +F +      EPD+  YN LING C+
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T     A+ LF+EM + N        P+  +YN++IDGLC  G +   +EL  +M D   
Sbjct: 488 TEMVDEAIVLFKEMRHKN------LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV+TY  ++  FC    +++A  LF +++ +G+ PD  T   I+D LCK  K+  A  
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ ++  G +PN  TY  LI+  C       A  L   ME N    D +++  +I    
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660

Query: 405 KNKDVEEALSLYSEMLSKGI 424
           +  + ++A  L  EM+++G+
Sbjct: 661 QRNETDKAEKLREEMIARGL 680



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 9/292 (3%)

Query: 99  RMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
            MH S  PP V ++NIL   L K       L +   +   G+ P+I T++ +++ +C   
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            V+    +  R+++S   P+ + +  LI G C    + EA  LF + R     PD+ +YN
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYN 514

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +LI+GLC  G       L +EM + +G+      P+ +TYN ++D  CK    DKA  LF
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCD-SGQ-----SPDVITYNILLDAFCKTQPFDKAISLF 568

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            ++  E I PD  T  +++   C       A+     ++  G  P+V T++++++ LCK+
Sbjct: 569 RQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKD 627

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           G   +A  LL  M      P+  T+  +I      ++ D A KL   M + G
Sbjct: 628 GSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 179/456 (39%), Positives = 255/456 (55%), Gaps = 64/456 (14%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
           F    CK+        +T   AL  F  M+R  P+P  +SSFN L   LAK KHY  V S
Sbjct: 38  FFLRHCKTGN------VTATHALHFFHLMMRSTPTPS-LSSFNHLLSGLAKIKHYSQVFS 90

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L+ ++  +GL  D  T +IL+NC C + R+  GF     ILR  ++              
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYS-------------- 136

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                                P++ TYNTLI GLC       A  LF  M        + 
Sbjct: 137 ---------------------PNIVTYNTLIKGLCMEHRISEATRLFLRMQK------LG 169

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE------NINPDVVTYTSVIRGFCYAN 302
           C P+ VTY T+I GLC  G ++ A +L  +M ++      N  P+V+TY  ++ G C   
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 303 DWNEAKRLFIEM----------MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
             +EAK+LF EM          +DQG+QPD+VTF+V++D LCK GK+ +A +LL +MI  
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  TYN+LI+G+C+   ++ AR+LFVSM S GC  DV+SYN LIN Y K   VEEA
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + LY+EML  G +P V+TY++L  G+F   +V+ A KLF  M+ + +A ++YTY  F+DG
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+  + EA++LF  ++ S ++L I + NCLIDGL
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 445



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 172/360 (47%), Gaps = 40/360 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP----------DIYTHSILINCFCK 154
           P V ++NI+   L K    D    LF+ + + G+ P          D+ T ++LI+  CK
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
            G+V     +LG ++ S   P+ VT+ SLI+G C    +  A  LF       CEPDV +
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 332

Query: 215 YNTLINGLCRTGHTIVALNLFEEMA-------------------------NGNGEFGVV- 248
           YN LING  +T     A+ L+ EM                          +    F V+ 
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 392

Query: 249 ---CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
                 N+ TY   +DGLCK   + +A +LF ++K  N   ++     +I G C A    
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
            A  LF ++ ++G +P+VVT+++++   C+ G++DKA+ L++ M   G  P+  TYNTL+
Sbjct: 453 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 512

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM-LSKGI 424
            G+  ++K++   +L   M       D ++ + +++   K++  +E L L     + KG+
Sbjct: 513 RGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 169/481 (35%), Positives = 272/481 (56%), Gaps = 51/481 (10%)

Query: 72  ERCKSSGQGDI---------NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH 122
           ER  +S  GD          ++I  ++A+ +F  M++  P P  V  FN L   +AK   
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNK 98

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           ++ V+SL +++ + G+  D+YT+SI INCFC+  ++S    VL ++++  + P+ VT +S
Sbjct: 99  FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158

Query: 183 LIKGLCAESRIMEAAALFTK-----------------HRVF------------------A 207
           L+ G C   RI +A AL  +                 H +F                   
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PD+ TY T++NGLC+ G   +AL+L ++M  G  E       + V YNTIIDGLCK  
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVVIYNTIIDGLCKYK 272

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  LF +M ++ I PDV TY+S+I   C    W++A RL  +M+++ + P+VVTFS
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K GK+ +A +L + MI R ++P+ +TY++LI+G+C+ D++D A+ +F  M S 
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  +VV+Y+TLI  +CK K VEE + L+ EM  +G+    VTY TL  G F+    + A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +F +M    V  +  TYN  +DGLCK+G + +A+ +F  ++ S  E +I +YN +I+G
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512

Query: 508 L 508
           +
Sbjct: 513 M 513



 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/387 (35%), Positives = 214/387 (55%), Gaps = 12/387 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GDI+L     AL +   M +       V  +N +   L K KH D  L+LF  +++ G+
Sbjct: 236 RGDIDL-----ALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD++T+S LI+C C  GR S    +L  ++     PN VTF++LI     E +++EA  
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ +    + +PD+FTY++LING C       A ++FE M + +      C PN VTY+T
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYST 403

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G CK   V++  ELF +M    +  + VTYT++I GF  A D + A+ +F +M+  G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V P+++T+++++D LCKNGK+ KA  + E +    + P+ YTYN +I+G C   K++   
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LF ++   G   +V++YNT+I+ +C+    EEA SL  +M   G  P   TYNTL    
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYT 465
                 E + +L  EMR    A D  T
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDAST 610



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 202/432 (46%), Gaps = 30/432 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + D M+ M   P   +   ++ G    NK  + V +L  ++   G  PD+ T+  
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGT 228

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G +     +L ++ +     + V + ++I GLC    + +A  LFT+     
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
             PDVFTY++LI+ LC  G    A  L  +M        VV                   
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+  TY+++I+G C    +D+AK +F  M  ++  P+VVTY+++I+GF
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A    E   LF EM  +G+  + VT++ ++    +    D A  + + M+  GV+PN 
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN L+DG C   K+  A  +F  ++ +    D+ +YN +I   CK   VE+   L+  
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +  KG+ P V+ YNT+  G       E A  L  +M+ +    ++ TYN  I    + G 
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588

Query: 479 VLEALELFRAIR 490
              + EL + +R
Sbjct: 589 REASAELIKEMR 600



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 8/255 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M+      P V +++ L     K K  +  + LF+ ++  GL  +  T++ 
Sbjct: 380 DEAKHMFELMIS-KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F +     +  +V  +++     PN +T+  L+ GLC   ++ +A  +F   +   
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD++TYN +I G+C+ G       LF  ++      GV   PN + YNT+I G C++G
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK----GV--SPNVIAYNTMISGFCRKG 552

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A  L  KMK++   P+  TY ++IR      D   +  L  EM   G   D  T  
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 612

Query: 328 VIMDELCKNGKMDKA 342
           ++ + L  +G++DK+
Sbjct: 613 LVTNML-HDGRLDKS 626


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 162/420 (38%), Positives = 245/420 (58%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F++++ M P P  V  FN + G + K KH    +SL K++   G+ P I+T SI
Sbjct: 66  DDAVTLFNHLINMQPLPS-VIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            INC+C +G +   F VLG +L+  + PN +T T+++KGLC    + +A           
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D   Y TLINGLC+ G +I A  L +EM       G V KPN V YN IID  CK+ 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEME------GQVVKPNIVIYNMIIDSFCKDE 238

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              KA++L+LK+ D  I+PD++TYTS+IRGFC    W E K+L  EM+++ + P+V TF+
Sbjct: 239 LTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFN 298

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D  C+ GKM +A  +  LM+ RG  P+  T+NTLI G+CL   +  ARKLF ++   
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV SY  LI  YCK K ++EA+SL++EM  K +   +V Y++L  GL +  ++  A
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LF  +  +    +  TYN  ID  CK   +   +ELF+ +        +++YN LI+G
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 163/305 (53%), Gaps = 6/305 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  L     +   +  V  L   + +  + P++YT ++LI+ FC+ G++     +
Sbjct: 257 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 316

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+ VTF +LI G C    ++EA  LF         PDV++Y  LI G C+
Sbjct: 317 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 376

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A++LF EM   N    +V       Y+++IDGLCK G +  A ELF  + ++  
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIV------LYSSLIDGLCKSGRISYAWELFSTINNDGP 430

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+TY  +I  FC   D +    LF  M  +G+ P V+T++++++  CK+ ++ +A  
Sbjct: 431 PPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMN 490

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL +M  + + P++ TYN+L DG C + +I  A +LF  M   G   DV +YN L++ +C
Sbjct: 491 LLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFC 550

Query: 405 KNKDV 409
           K +DV
Sbjct: 551 KAQDV 555



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A  LF  + +    P V+ + ++I           A  L  +M+ +GV P + T S+
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            ++  C  G+M  A  +L +++ RG  PN  T  T++ G C+  ++  A     ++ + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 389 CMHDVVSYNTLINW-----------------------------------YCKNKDVEEAL 413
            + D V Y TLIN                                    +CK++   +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            LY +++  GI P ++TY +L  G     Q     +L  EM   ++  + YT+N  ID  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           C+ G ++EA  +F  +     + +IV++N LI G
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISG 338



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  ++A  LF  +++    P V+ F+ I+  + K      A  LL+ M+++GV P+ +T 
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           +  I+ YC   ++  A  +   +   G   + ++  T++   C N +V++A+  +  + +
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 182

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G+    V Y TL  GL +I +   A +L  EM    V  +   YN  ID  CK     +
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDG 507
           A +L+  I D   + +I++Y  LI G
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRG 268


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/421 (39%), Positives = 253/421 (60%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP +  FN +    AK KHY T +SL  RL   G+ PD+ T +I
Sbjct: 41  DDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC MG+++ GF VL +IL+  + P+ VT  +LIKGLC + ++ +A     K     
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +Y TLING+C+ G T  A+ L +++       G + KPN V Y+TIID LCK  
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKID------GRLTKPNVVMYSTIIDALCKYQ 213

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ DVVTY+++I GFC      EA  L  EM+ + + P+V T++
Sbjct: 214 LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYN 273

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK GK+ +A  +L +M+   V P+  TY+TL+DGY L  ++  A+ +F +M   
Sbjct: 274 ILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV +Y  LIN +CKNK V+EAL+L+ EM  K + P +VTY++L  GL +  ++   
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L DEM      A+  TY++ IDGLCK+G +  A+ LF  ++D     N  ++  L+DG
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453

Query: 508 L 508
           L
Sbjct: 454 L 454



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 208/405 (51%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N L   L         L    +L + G   +  ++  LIN  CK+G       
Sbjct: 126 PPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 185

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L +I      PN V ++++I  LC    + EA  LF++  V     DV TY+TLI G C
Sbjct: 186 LLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 245

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A+ L  EM            PN  TYN ++D LCKEG V +AK +   M    
Sbjct: 246 IEGKLKEAIGLLNEMVLK------TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDV+TY++++ G+    +  +A+ +F  M   GV PDV T++++++  CKN  +D+A 
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M  + + P   TY++LIDG C + +I +   L   M   G   +V++Y++LI+  
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CKN  ++ A++L+++M  +GI+P   T+  L  GL +  +++ A ++F ++       + 
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YTYN  IDG CK G + EAL +   + D+    + V++  +I  L
Sbjct: 480 YTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 179/338 (52%), Gaps = 6/338 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  ++ +   L K +       LF  +   G+  D+ T+S LI  FC  G++    
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     PN  T+  L+  LC E ++ EA ++         +PDV TY+TL++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                   A ++F  M+      GV   P+  TY  +I+G CK   VD+A  LF +M  +
Sbjct: 315 FLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ P +VTY+S+I G C +        L  EM D+G   +V+T+S ++D LCKNG +D+A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRA 428

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L   M  +G+ PNT+T+  L+DG C   ++  A+++F  + + G   +V +YN +I+ 
Sbjct: 429 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG 488

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           +CK   +EEAL++ S+M   G  P  VT+  + + LF+
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/272 (37%), Positives = 155/272 (56%), Gaps = 8/272 (2%)

Query: 121  KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
            KHY T +SL  RL   G+ PD++T +ILINCFC MG+++  F +L +IL+  + P+ +TF
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 181  TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            T+LI GLC + ++ +A     K      + +  +Y TLING+C+ G T  A+ L  ++  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID- 1058

Query: 241  GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                 G + KP+ V YNTIID LCK   V KA  LF +M  + I+ DVVTY ++I GFC 
Sbjct: 1059 -----GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113

Query: 301  ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK--MDKASRLLELMIWRGVNPNT 358
                 EA  L  +M+ + + P+V T+++++D LCK GK  +D++  +L  M   G   N 
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173

Query: 359  YTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             T+  +I      D+ D   KL   M + G +
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 196/399 (49%), Gaps = 10/399 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   + K       + L ++++     P++  +S +I+  CK   VS  + +   +
Sbjct: 166 SYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                + + VT+++LI G C E ++ EA  L  +  +    P+V+TYN L++ LC+ G  
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A ++   M           KP+ +TY+T++DG      V KA+ +F  M    + PDV
Sbjct: 286 KEAKSVLAVM------LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT +I GFC     +EA  LF EM  + + P +VT+S ++D LCK+G++     L++ 
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RG   N  TY++LIDG C    +D A  LF  M+  G   +  ++  L++  CK   
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++A  ++ ++L+KG    V TYN +  G  +   +E AL +  +M  N    D  T+  
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519

Query: 469 FIDGLCK----SGFVLEALELFRAIRDSKYELNIVSYNC 503
            I  L K     G V    +++  +   K E   +++ C
Sbjct: 520 IIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSITFKC 558



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 8/261 (3%)

Query: 196  AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
            A +L  +  +   +PD+FT N LIN  C  G      ++  ++            P+T+T
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG------YHPDTIT 998

Query: 256  YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
            + T+I+GLC +G V+KA     K+  +    + V+Y ++I G C   D   A +L  ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 316  DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             +  +PDVV ++ I+D LCK+  + KA  L   M  +G++ +  TYNTLI G+C+  K+ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 376  HARKLFVSMESNGCMHDVVSYNTLINWYCK-NKDV-EEALSLYSEMLSKGIKPTVVTYNT 433
             A  L   M       +V +YN L++  CK  KD+ +E+LS+ S+M   G K   VT+  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 434  LFLGLFEIHQVERALKLFDEM 454
            +   LFE  + ++  KL  EM
Sbjct: 1179 IISALFEKDENDKVEKLLHEM 1199



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 126/239 (52%), Gaps = 2/239 (0%)

Query: 272  AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
            A  L  +++ + I PD+ T   +I  FC+         +  +++ +G  PD +TF+ +++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 332  ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             LC  G+++KA    + ++ +G   N  +Y TLI+G C       A KL   ++      
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 392  DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            DVV YNT+I+  CK++ V +A  L+ EM  KGI   VVTYNTL  G   + +++ A+ L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 452  DEMRRNHVAADTYTYNNFIDGLCKSGFVL--EALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++M    +  +  TYN  +D LCK G  L  E+L +   + D+  + N V++  +I  L
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M      P ++ +  ++  F     ++ A  L   +  +G+QPD++T ++
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C  G++     +L  ++ RG  P+T T NTLI G CL  ++  A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + VSY TLIN  CK  D   A+ L  ++  +  KP VV Y+T+   L +   V  A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF EM    ++AD  TY+  I G C  G + EA+ L   +       N+ +YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 2/226 (0%)

Query: 250  KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            +P+  T N +I+  C  G +     +  K+     +PD +T+T++I G C     N+A  
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
               +++ QG Q + V++  +++ +CK G    A +LL  +  R   P+   YNT+ID  C
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 370  LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                +  A  LF  M   G   DVV+YNTLI  +C    ++EA+ L ++M+ K I P V 
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 430  TYNTLFLGLFEIHQ--VERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            TYN L   L +  +  ++ +L +  +M  N   A+  T+   I  L
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%)

Query: 407  KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            K    A+SL   +  KGI+P + T N L      + Q+     +  ++ +     DT T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 467  NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               I+GLC  G V +AL     +    ++LN VSY  LI+G+
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGV 1041


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 162/456 (35%), Positives = 262/456 (57%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F  M++  P P  V  F+ L   +AK K +D V+S  +++   G+  ++YT++I
Sbjct: 47  DEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           +INC C+  ++S    +LG++++  + P+ VT  SL+ G C  +RI EA AL  +     
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 203 ------------HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                       H +F                   C+PD+ TY  +INGLC+ G   +AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           NL  +M  G  E       + V Y+T+ID LCK   VD A  LF +M ++ I PDV TY+
Sbjct: 226 NLLNKMEKGKIE------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+I   C    W++A RL  +M+++ + P+VVTF+ ++D   K GK+ +A +L + MI R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            ++PN  TYN+LI+G+C+ D++D A+++F  M S  C+ DVV+YNTLIN +CK K V + 
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + L+ +M  +G+    VTY TL  G F+    + A  +F +M  + V  +  TYN  +DG
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+G + +A+ +F  ++ SK E +I +YN + +G+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 140/401 (34%), Positives = 213/401 (53%), Gaps = 12/401 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ AL + + M +       V  ++ +   L K +H D  L+LF  +++ G+ PD++T+S
Sbjct: 221 PDLALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+C C  GR S    +L  +L     PN VTF SLI     E +++EA  LF +    
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
           + +P++ TYN+LING C       A  +F  M + +      C P+ VTYNT+I+G CK 
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNTLINGFCKA 393

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V    ELF  M    +  + VTYT++I GF  A+D + A+ +F +M+  GV P+++T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LCKNGK++KA  + E +    + P+ YTYN + +G C   K++    LF S+  
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV++YNT+I+ +CK    EEA +L+ +M   G  P   TYNTL            
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573

Query: 447 ALKLFDEMRRNHVAADTYTY----NNFIDGLCKSGFVLEAL 483
           + +L  EMR    A D  TY    +   DG    GF LE L
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGF-LEVL 613



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 12/319 (3%)

Query: 192 RIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
           ++ EA  LF    K R F   P +  ++ L++ + +     + ++  E+M       GV 
Sbjct: 45  KLDEAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKMEI----LGV- 96

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              N  TYN +I+ LC+   +  A  +  KM      P +VT  S++ GFC+ N  +EA 
Sbjct: 97  -SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M++ G QPD VTF+ ++  L ++ K  +A  L+E M+ +G  P+  TY  +I+G 
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   + D A  L   ME      DVV Y+T+I+  CK + V++AL+L++EM +KGI+P V
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TY++L   L    +   A +L  +M    +  +  T+N+ ID   K G ++EA +LF  
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335

Query: 489 IRDSKYELNIVSYNCLIDG 507
           +     + NIV+YN LI+G
Sbjct: 336 MIQRSIDPNIVTYNSLING 354



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+D+A  L   M+     P+   ++ L+       K D        ME  G  H++ +YN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            +IN  C+   +  AL++  +M+  G  P++VT N+L  G    +++  A+ L D+M   
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               DT T+   + GL +     EA+ L   +     + ++V+Y  +I+GL
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 259/459 (56%), Gaps = 42/459 (9%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I  ++A+ +F  M+   P P  V  F+ LF  +AK K YD VL+L K++   G+  ++YT
Sbjct: 67  IKADDAIDLFRDMIHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            SI+INCFC+  ++   F  +G+I++  + PN +TF++LI GLC E R+ EA  L  +  
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT--------- 255
               +PD+ T NTL+NGLC +G    A+ L ++M     E+G  C+PN VT         
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQPNAVTYGPVLNVMC 239

Query: 256 --------------------------YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
                                     Y+ IIDGLCK G +D A  LF +M+ + I  +++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  +I GFC A  W++  +L  +M+ + + P+VVTFSV++D   K GK+ +A  L + M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I RG+ P+T TY +LIDG+C  + +D A ++   M S GC  ++ ++N LIN YCK   +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++ L L+ +M  +G+    VTYNTL  G  E+ ++  A +LF EM    V  +  TY   
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +DGLC +G   +ALE+F  I  SK EL+I  YN +I G+
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ + D M+     P  V+ +  +   + K+      + L +++    +  D   +SI+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G + + F +   +     T N +T+  LI G C   R  + A L         
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V T++ LI+   + G    A  L +EM +     G+   P+T+TY ++IDG CKE  
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTITYTSLIDGFCKENH 383

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA ++   M  +  +P++ T+  +I G+C AN  ++   LF +M  +GV  D VT++ 
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ GK++ A  L + M+ R V PN  TY  L+DG C   + + A ++F  +E + 
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+  YN +I+  C    V++A  L+  +  KG+KP V TYN +  GL +   +  A 
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF +M  +  A D +TYN  I      G   ++++L   ++   + ++  +   +ID L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 160/371 (43%), Positives = 228/371 (61%), Gaps = 8/371 (2%)

Query: 140 PDIYTHSILINCFCKMGR--VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           PD+YT +ILINCFC          F VLG + +    PN VTF++L+ GL ++++I++A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            LF +      EPDV TY+T+INGLC+ G T +A+ L ++M          CKPN V Y+
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG------CKPNVVVYS 121

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           TIID LCK+  + +A E   +M +  I+P+VVTY+S++ GFC     NEA  LF +M+++
Sbjct: 122 TIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER 181

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            V PD VTF++++D L K G + +A  + E MI +GV PN  TYN L+DGYC   ++D A
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 241

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           +KLF  M   GC   V SYN LI  +CK+  ++EA  L +EM  K + P  VTY+TL  G
Sbjct: 242 QKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             +  + + A KL +EMR   +  D  TY+  +DGLCK G + EA EL +A+++SK E N
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 498 IVSYNCLIDGL 508
           I  Y  LI G+
Sbjct: 362 IFIYTILIQGM 372



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 223/418 (53%), Gaps = 7/418 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +   M ++   P  V+   +L G  +K K  D V  LF  +   G  PD+ T+S +I
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV-KLFDEMVKMGYEPDVITYSTII 89

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CKMG  +    +L ++      PN V ++++I  LC +  I EA    ++       
Sbjct: 90  NGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGIS 149

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V TY+++++G C  G +  A +LF++M   N        P+TVT+N ++DGL KEG +
Sbjct: 150 PNVVTYSSILHGFCNLGRSNEATSLFKQMVERN------VMPDTVTFNILVDGLSKEGMI 203

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A+ +F  M ++ + P+V TY +++ G+C  +  +EA++LF  M+ +G  P V +++++
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNIL 263

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK+G++D+A  LL  M  + + P+T TY+TL+ G+C   +   A+KL   M S G 
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGL 323

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D+++Y+ +++  CK   ++EA  L   M    I+P +  Y  L  G+    ++E A +
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARE 383

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LF  +    +  D  TY   I GL K G   EA ELFR +       N  +YN +I G
Sbjct: 384 LFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 209/406 (51%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCL--AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           P V +  IL  C   + + H+    S+   +   GL P+  T S L+N      ++    
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +++  + P+ +T++++I GLC       A  L  K     C+P+V  Y+T+I+ L
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A+    EM N          PN VTY++I+ G C  G  ++A  LF +M + 
Sbjct: 128 CKDKLITEAMEFLSEMVNRG------ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER 181

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ PD VT+  ++ G        EA+ +F  M+++GV+P+V T++ +MD  C   +MD+A
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 241

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +L  +M+ +G  P+  +YN LI G+C + +ID A+ L   M       D V+Y+TL+  
Sbjct: 242 QKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C++   ++A  L  EM S G+ P ++TY+ +  GL +   ++ A +L   M+ + +  +
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + Y   I G+C  G +  A ELF  +     + ++V+Y  +I GL
Sbjct: 362 IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 187/367 (50%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+K     +     + + G+ P++ T+S +++ FC +GR +    +
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P+ VTF  L+ GL  E  I+EA  +F        EP+V TYN L++G C 
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LF  M          C P+  +YN +I G CK G +D+AK L  +M  + +
Sbjct: 235 QSQMDEAQKLFNIMVRKG------CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++++GFC      +A++L  EM   G+ PD++T+S+++D LCK G +D+A  
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M    + PN + Y  LI G C   K++ AR+LF ++   G   DVV+Y  +I+   
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     EA  L+ +M   G  P   TYN +  G         A +L +EM     +AD+ 
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSS 468

Query: 465 TYNNFID 471
           T+    D
Sbjct: 469 TFQMLSD 475


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 170/467 (36%), Positives = 261/467 (55%), Gaps = 34/467 (7%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +ER +S     I  I  ++A+ +F  M R  P P  +  F+ LF  +A+ K YD VL L 
Sbjct: 41  RERLRSG----IVDIKEDDAVDLFQEMTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLC 95

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K++   G+  ++YT SI+INC C+  ++S  F  +G+I++  + P+ VTF++LI GLC E
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------ 244
            R+ EA  L  +      +P + T N L+NGLC  G    A+ L + M     +      
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 245 ---FGVVCKP--------------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                V+CK                     + V Y+ IIDGLCK+G +D A  LF +M+ 
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           +    D++ YT++IRGFCYA  W++  +L  +M+ + + PDVV FS ++D   K GK+ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L + MI RG++P+T TY +LIDG+C  +++D A  +   M S GC  ++ ++N LIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            YCK   +++ L L+ +M  +G+    VTYNTL  G  E+ ++E A +LF EM    V  
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  +Y   +DGLC +G   +ALE+F  I  SK EL+I  YN +I G+
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 210/418 (50%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D M+ M   P  ++   ++ G     K  D VL L  R+   G  P+  T+  
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGP 217

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++   CK G+ +    +L ++       +AV ++ +I GLC +  +  A  LF +  +  
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D+  Y TLI G C  G       L  +M            P+ V ++ +ID   KEG
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK------ITPDVVAFSALIDCFVKEG 331

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A+EL  +M    I+PD VTYTS+I GFC  N  ++A  +   M+ +G  P++ TF+
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  CK   +D    L   M  RGV  +T TYNTLI G+C   K++ A++LF  M S 
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+VSY  L++  C N + E+AL ++ ++    ++  +  YN +  G+    +V+ A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             LF  +    V  D  TYN  I GLCK G + EA  LFR + +  +  N  +YN LI
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 206/421 (48%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + D M+     P  V+ +  +   + K+      + L +++    +  D   +SI
Sbjct: 194 SDAVLLIDRMVETGFQPNEVT-YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK G + + F +   +    F  + + +T+LI+G C   R  + A L        
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV  ++ LI+   + G    A  L +EM     + G+   P+TVTY ++IDG CKE 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTVTYTSLIDGFCKEN 366

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +DKA  +   M  +   P++ T+  +I G+C AN  ++   LF +M  +GV  D VT++
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C+ GK++ A  L + M+ R V P+  +Y  L+DG C   + + A ++F  +E +
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+  YN +I+  C    V++A  L+  +  KG+KP V TYN +  GL +   +  A
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF +M  +  + +  TYN  I      G   ++ +L   I+   + ++  +   ++D 
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606

Query: 508 L 508
           L
Sbjct: 607 L 607



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 105/220 (47%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V+Y   +R        ++A  LF EM     +P ++ FS +   + +  + D    L + 
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+  N YT + +I+  C   K+  A      +   G   D V+++TLIN  C    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V EAL L   M+  G KPT++T N L  GL    +V  A+ L D M       +  TY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +CKSG    A+EL R + + K +L+ V Y+ +IDGL
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  311 bits (797), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 170/467 (36%), Positives = 261/467 (55%), Gaps = 34/467 (7%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +ER +S     I  I  ++A+ +F  M R  P P  +  F+ LF  +A+ K YD VL L 
Sbjct: 41  RERLRSG----IVDIKEDDAVDLFQEMTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLC 95

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K++   G+  ++YT SI+INC C+  ++S  F  +G+I++  + P+ VTF++LI GLC E
Sbjct: 96  KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------ 244
            R+ EA  L  +      +P + T N L+NGLC  G    A+ L + M     +      
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215

Query: 245 ---FGVVCKP--------------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                V+CK                     + V Y+ IIDGLCK+G +D A  LF +M+ 
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           +    D++ YT++IRGFCYA  W++  +L  +M+ + + PDVV FS ++D   K GK+ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L + MI RG++P+T TY +LIDG+C  +++D A  +   M S GC  ++ ++N LIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            YCK   +++ L L+ +M  +G+    VTYNTL  G  E+ ++E A +LF EM    V  
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  +Y   +DGLC +G   +ALE+F  I  SK EL+I  YN +I G+
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 210/418 (50%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D M+ M   P  ++   ++ G     K  D VL L  R+   G  P+  T+  
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGP 217

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++   CK G+ +    +L ++       +AV ++ +I GLC +  +  A  LF +  +  
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D+  Y TLI G C  G       L  +M            P+ V ++ +ID   KEG
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK------ITPDVVAFSALIDCFVKEG 331

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A+EL  +M    I+PD VTYTS+I GFC  N  ++A  +   M+ +G  P++ TF+
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  CK   +D    L   M  RGV  +T TYNTLI G+C   K++ A++LF  M S 
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+VSY  L++  C N + E+AL ++ ++    ++  +  YN +  G+    +V+ A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             LF  +    V  D  TYN  I GLCK G + EA  LFR + +  +  N  +YN LI
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 201/423 (47%), Gaps = 30/423 (7%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           ++I+   L K+   D   +LF  +   G   DI  ++ LI  FC  GR   G  +L  ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           +   TP+ V F++LI     E ++ EA  L  +       PD  TY +LI+G C+     
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A ++ + M +        C PN  T+N +I+G CK   +D   ELF KM    +  D V
Sbjct: 370 KANHMLDLMVSKG------CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I+GFC       AK LF EM+ + V+PD+V++ +++D LC NG+ +KA  + E +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
               +  +   YN +I G C   K+D A  LF S+   G   DV +YN +I   CK   +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT------ 463
            EA  L+ +M   G  P   TYN L           ++ KL +E++R   + D       
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFA 603

Query: 464 ----------------YTYNNFIDGLC--KSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
                           +T+   +   C  ++  V +A  LF+ ++   Y+ N+V+YN +I
Sbjct: 604 LSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVI 663

Query: 506 DGL 508
            GL
Sbjct: 664 KGL 666



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 191/411 (46%), Gaps = 30/411 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F+ L  C  K         L K +   G+ PD  T++ LI+ FCK  ++     +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN  TF  LI G C  + I +   LF K  +     D  TYNTLI G C 
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   VA  LF+EM +         +P+ V+Y  ++DGLC  G  +KA E+F K++   +
Sbjct: 435 LGKLEVAKELFQEMVSRR------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D+  Y  +I G C A+  ++A  LF  +  +GV+PDV T+++++  LCK G + +A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL----------------------FV 382
           L   M   G +PN  TYN LI  +        + KL                        
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608

Query: 383 SMESNGCMHDVVSYNTLINWYC--KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
            M   G   DV ++ TL+  +C  +N  V +A +L+  M + G KP VVTYNT+  GL  
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
            + + +   + D+M       +  T + FI GLCK      A+ L R + +
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEN 719



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 105/220 (47%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V+Y   +R        ++A  LF EM     +P ++ FS +   + +  + D    L + 
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+  N YT + +I+  C   K+  A      +   G   D V+++TLIN  C    
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V EAL L   M+  G KPT++T N L  GL    +V  A+ L D M       +  TY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +CKSG    A+EL R + + K +L+ V Y+ +IDGL
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  311 bits (796), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 167/421 (39%), Positives = 248/421 (58%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+++L M     P+  FN +   L K  H+ T +S  K++    + PD++T +I
Sbjct: 45  DDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI 104

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +G ++  F VL +I +  F P+ VT T+LIKGLC   ++ EA           
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  +Y TLINGLC+TG T  AL +  ++       G++ +PN V YNTIID LCK+ 
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKID------GLLVQPNVVMYNTIIDSLCKDK 218

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A +L  +M  + I PDVVTYT++I G        EA  LF +M+ + ++PDV TF+
Sbjct: 219 LVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFN 278

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK G+M KA  +L +MI +GV+ N  TYN+L+DGY L  + + A  +F +M   
Sbjct: 279 ILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARR 338

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV SY+ +IN  CK K V+EA++L+ EM SK + P  VTYN+L  GL +  ++  A
Sbjct: 339 GVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDA 398

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L +EM      AD  TY++ +D LCK+  V +A+ L   I+D   + NI +Y  L+DG
Sbjct: 399 WDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDG 458

Query: 508 L 508
           L
Sbjct: 459 L 459



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 217/450 (48%), Gaps = 41/450 (9%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT--------- 144
           F   + +    P + +FNIL  C     H +   S+  ++   G  PD  T         
Sbjct: 86  FSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLC 145

Query: 145 --------------------------HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
                                     +  LIN  CK G       VL +I      PN V
Sbjct: 146 LNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVV 205

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
            + ++I  LC +  ++ A+ L ++  V    PDV TY TLI G    G    A+ LF +M
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQM 265

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
              N       KP+  T+N ++DGLCKEG + KA+ +   M  + ++ ++VTY S++ G+
Sbjct: 266 LLKN------IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
                 N+A  +F  M  +GV PDV ++S++++ LCK   +D+A  L + M  + + PNT
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN+LIDG     +I  A  L   M + G   DV++Y++L++  CKN  V++A++L ++
Sbjct: 380 VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITK 439

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +  +GI+P + TY  L  GL +  +++ A  ++ ++       D   YN  ++GLCK G 
Sbjct: 440 IKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGL 499

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             EAL L   + D+    + V+Y  L+  L
Sbjct: 500 FDEALSLVSKMEDNGCIPDAVTYETLVRAL 529



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 188/375 (50%), Gaps = 29/375 (7%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K       L + ++++   + P++  ++ +I+  CK   V H   +   +
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P+ VT+T+LI G     R+ EA  LF +  +   +PDV+T+N L++GLC+ G  
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEM 290

Query: 229 IVALNLFEEMANGNGEFGVV-----------------------------CKPNTVTYNTI 259
             A N+   M     +  +V                               P+  +Y+ +
Sbjct: 291 KKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIM 350

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+GLCK   VD+A  LF +M  +++ P+ VTY S+I G       ++A  L  EM ++G 
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQ 410

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
             DV+T+S ++D LCKN ++DKA  L+  +  +G+ PN YTY  L+DG C   ++  A+ 
Sbjct: 411 PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQA 470

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           ++  +   G   DV  YN ++N  CK    +EALSL S+M   G  P  VTY TL   LF
Sbjct: 471 VYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALF 530

Query: 440 EIHQVERALKLFDEM 454
           E  + ++A+KL  EM
Sbjct: 531 ENDKNDKAVKLLREM 545



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 178/320 (55%), Gaps = 7/320 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+   +++GCL   +  + V  LF ++    + PD+YT +IL++  CK G +     
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAV-GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARN 295

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL  +++     N VT+ SL+ G     +  +A  +F         PDV +Y+ +INGLC
Sbjct: 296 VLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLC 355

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +T     A+NLF+EM + +        PNTVTYN++IDGL K G +  A +L  +M +  
Sbjct: 356 KTKMVDEAVNLFKEMHSKS------MAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              DV+TY+S++   C  +  ++A  L  ++ DQG+QP++ T+++++D LCKNG++  A 
Sbjct: 410 QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQ 469

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            + + ++ +G + +   YN +++G C     D A  L   ME NGC+ D V+Y TL+   
Sbjct: 470 AVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRAL 529

Query: 404 CKNKDVEEALSLYSEMLSKG 423
            +N   ++A+ L  EM+ +G
Sbjct: 530 FENDKNDKAVKLLREMIVQG 549


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  311 bits (796), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 163/422 (38%), Positives = 246/422 (58%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M+R  P P  V+SF+ L   +   KHY +V+SLF+ ++   +    +  SI
Sbjct: 54  DDAFSLFRQMVRTKPLPS-VASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVF 206
           ++N  C M R   GF VL    +     N VTFT+LI+GL AE+++ +A  LF K  R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            CEP+   Y T++NGLC+ GHT  A +L   M  G+       KPNT TY  +ID  CK+
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNTRTYTIVIDAFCKD 226

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D A  L  +MK ++I PD+ TY+++I   C  + W   + LF+EM+   + P+V TF
Sbjct: 227 GMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF 286

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LCK GK++ A  ++  MI +GV+P+  TYN +IDGY L  ++D AR++F SM +
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                D++SYN LIN Y + K ++EA+ +  E+  KG+KP++VT N L  GLFE+ + + 
Sbjct: 347 KSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKS 406

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A   FDEM       D YT+   + G  K+G V EA+  F  +   + + NI  Y  +ID
Sbjct: 407 AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVID 466

Query: 507 GL 508
           GL
Sbjct: 467 GL 468



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 210/398 (52%), Gaps = 8/398 (2%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           ++ G  A+NK  D V  LFK+L    +  P+   +  ++N  CK G     F +L  + +
Sbjct: 148 LIRGLFAENKVKDAV-HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN  T+T +I   C +  +  A +L  + +  +  PD+FTY+TLI+ LC+      
Sbjct: 207 GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
              LF EM + N        PN  T+N++IDGLCKEG V+ A+E+   M ++ ++PDV+T
Sbjct: 267 VRTLFLEMIHLN------IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT 320

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G+      + A+ +F  M+++ ++PD+++++++++   +  K+D+A ++   + 
Sbjct: 321 YNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREIS 380

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            +G+ P+  T N L+ G     +   A+  F  M S G + D+ ++ TL+  Y KN  VE
Sbjct: 381 QKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVE 440

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA+S + ++  +     +  Y  +  GL +  ++++A   F+++    +  D  TY   I
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMI 500

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G C+ G + EA ++ R + D+    +  +YN ++ G 
Sbjct: 501 SGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 202/418 (48%), Gaps = 6/418 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  ++R +   P    +  +   L K  H      L + +      P+  T++I+
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK G +     +L  + +    P+  T+++LI  LC  S+      LF +      
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V T+N++I+GLC+ G    A    EE+     E GV   P+ +TYN IIDG    G 
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDA----EEIMRYMIEKGV--DPDVITYNMIIDGYGLRGQ 333

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD+A+E+F  M +++I PD+++Y  +I G+      +EA ++  E+  +G++P +VT +V
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  L + G+   A    + M+  G  P+ YT+ TL+ GY     ++ A   F  +E   
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++  Y  +I+  CKN  +++A + + ++   G+ P V+TY  +  G  +   ++ A 
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +  +M  N   AD  TYN  + G  +S  V E       I    +     +   L+D
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  IFD M+      P + S+NIL    A+ K  D  + + + ++  GL P I T ++
Sbjct: 335 DRAREIFDSMIN-KSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   ++GR          +L +   P+  T  +L+ G      + EA + F K     
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + ++  Y  +I+GLC+ G    A   FE++        +   P+ +TY  +I G C+EG
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP------LIGLHPDVITYTAMISGYCQEG 507

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+AK++  KM+D     D  TY  ++RGF  +N  +E K    E+  +    +  T  
Sbjct: 508 LLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVE 567

Query: 328 VIMDELCKNGKMDKASRLLELMI 350
           ++MD + ++  + +    ++L I
Sbjct: 568 LLMDIIAEDPSITRKMHWIKLHI 590



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 36/275 (13%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A  LF +M      P V +++ +++   +   ++    LF E+    +       S+
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM---- 384
           +++  C   + D    +L +   +G+  N  T+ TLI G    +K+  A  LF  +    
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 385 --ESNGCMHDVV------------------------------SYNTLINWYCKNKDVEEA 412
             E N  M+  V                              +Y  +I+ +CK+  ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            SL +EM  K I P + TY+TL   L ++ Q E    LF EM   ++  +  T+N+ IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LCK G V +A E+ R + +   + ++++YN +IDG
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDG 327


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  310 bits (795), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 259/459 (56%), Gaps = 42/459 (9%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I  ++A+ +F  M+   P P  V  F+ LF  +AK K YD VL+L K++   G+  ++YT
Sbjct: 165 IKADDAIDLFRDMIHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 223

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            SI+INCFC+  ++   F  +G+I++  + PN +TF++LI GLC E R+ EA  L  +  
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT--------- 255
               +PD+ T NTL+NGLC +G    A+ L ++M     E+G  C+PN VT         
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQPNAVTYGPVLNVMC 337

Query: 256 --------------------------YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
                                     Y+ IIDGLCK G +D A  LF +M+ + I  +++
Sbjct: 338 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 397

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  +I GFC A  W++  +L  +M+ + + P+VVTFSV++D   K GK+ +A  L + M
Sbjct: 398 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 457

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I RG+ P+T TY +LIDG+C  + +D A ++   M S GC  ++ ++N LIN YCK   +
Sbjct: 458 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 517

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++ L L+ +M  +G+    VTYNTL  G  E+ ++  A +LF EM    V  +  TY   
Sbjct: 518 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 577

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +DGLC +G   +ALE+F  I  SK EL+I  YN +I G+
Sbjct: 578 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ + D M+     P  V+ +  +   + K+      + L +++    +  D   +SI+
Sbjct: 309 EAMLLIDKMVEYGCQPNAVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 367

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G + + F +   +     T N +T+  LI G C   R  + A L         
Sbjct: 368 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 427

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V T++ LI+   + G    A  L +EM +     G+   P+T+TY ++IDG CKE  
Sbjct: 428 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTITYTSLIDGFCKENH 481

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA ++   M  +  +P++ T+  +I G+C AN  ++   LF +M  +GV  D VT++ 
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ GK++ A  L + M+ R V PN  TY  L+DG C   + + A ++F  +E + 
Sbjct: 542 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+  YN +I+  C    V++A  L+  +  KG+KP V TYN +  GL +   +  A 
Sbjct: 602 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF +M  +  A D +TYN  I      G   ++++L   ++   + ++  +   +ID L
Sbjct: 662 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 6/303 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F++L     K         L K +   G+ PD  T++ LI+ FCK   +     +
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++     PN  TF  LI G C  +RI +   LF K  +     D  TYNTLI G C 
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   VA  LF+EM +          PN VTY  ++DGLC  G  +KA E+F K++   +
Sbjct: 549 LGKLNVAKELFQEMVSRK------VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D+  Y  +I G C A+  ++A  LF  +  +GV+P V T+++++  LCK G + +A  
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 662

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   G  P+ +TYN LI  +        + KL   ++  G   D  +   +I+   
Sbjct: 663 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 722

Query: 405 KNK 407
            +K
Sbjct: 723 DDK 725


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  310 bits (795), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 155/419 (36%), Positives = 250/419 (59%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +F+ +L  +P+      FN + G L K+KHY TVLSL +++   G+ P+  T +ILI
Sbjct: 52  AVSLFNSLLHQNPTLTAFE-FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI 110

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NCFC++G +   F VL +IL+  + P+ +T  + IKG C + +I +A     K       
Sbjct: 111 NCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 170

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D  +Y TLINGLC+ G T  AL L   +       G + + N V YNT+IDG+ K+  V
Sbjct: 171 LDQVSYGTLINGLCKVGETRAALQLLRRVD------GKLVQLNAVMYNTVIDGMSKDKHV 224

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A +L+ +M  + I+PDVVTY+++IRGF       +A  LF +M+ + ++PDV TF+++
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK G++ KA  +L++M+ + + PN  T+NTL+DG+C   K+   + +F  M   G 
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +VV+Y +L++ YC  K V +A  +++ M  +G+   V +YN +  G  +I +V++A+K
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LF EM   H+  D  TYN+ IDGLCKSG +  A +L   + D     NI++YN +++ L
Sbjct: 405 LFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 32/389 (8%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           A  +   +L+M   P  ++    + G CL    H    L+   +L + G   D  ++  L
Sbjct: 122 AFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIH--QALNFHDKLVALGFHLDQVSYGTL 179

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  CK+G       +L R+       NAV + ++I G+  +  + +A  L+++      
Sbjct: 180 INGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRI 239

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TY+ LI G    G    A++LF +M   N       KP+  T+N ++DG CKEG 
Sbjct: 240 SPDVVTYSALIRGFFIVGKLKDAIDLFNKMILEN------IKPDVYTFNILVDGFCKEGR 293

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KAK +   M  ++I P+V T+ +++ GFC      E K +F  MM QG++P+VVT+  
Sbjct: 294 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS 353

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  C   +++KA ++   M  RGV  N ++YN +I+G+C   K+D A KLF+ M    
Sbjct: 354 LMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKH 413

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT--------------- 433
            + DVV+YN+LI+  CK+  +  A  L +EM  +G  P ++TYN+               
Sbjct: 414 IIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQ 473

Query: 434 --------LFLGLFEIHQVERALKLFDEM 454
                   L  GL +  ++E A K+F+++
Sbjct: 474 PNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 30/288 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  ++  M+    SP  V+   ++ G     K  D +  LF ++    + PD+YT +I
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI-DLFNKMILENIKPDVYTFNI 283

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK GR+     VL  ++     PN  TF +L+ G C + ++ E   +F       
Sbjct: 284 LVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQG 343

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+V TY +L++G C       A  +F  M+    + GV    N  +YN +I+G CK  
Sbjct: 344 IKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMS----QRGVTA--NVHSYNIMINGFCKIK 397

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM------------- 314
            VDKA +LF++M  ++I PDVVTY S+I G C +   + A +L  EM             
Sbjct: 398 KVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN 457

Query: 315 ----------MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                      DQG+QP++ T ++++  LC++GK++ A ++ E ++ +
Sbjct: 458 SILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 36/298 (12%)

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
           F ++ + N + Y++I         VD A  LF  +  +N       +  ++     +  +
Sbjct: 26  FLILLQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHY 84

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           +    L  +M  +G+ P+ VTF+++++  C+ G +  A  +L  ++  G  P+  T NT 
Sbjct: 85  HTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTF 144

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC-------------------- 404
           I G+CL  +I  A      + + G   D VSY TLIN  C                    
Sbjct: 145 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLV 204

Query: 405 ---------------KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
                          K+K V +A  LYSEM++K I P VVTY+ L  G F + +++ A+ 
Sbjct: 205 QLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAID 264

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LF++M   ++  D YT+N  +DG CK G + +A  +   +     + N+ ++N L+DG
Sbjct: 265 LFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDG 322



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  + + Y+S+   F ++ND + A  LF  ++ Q        F+ I+  L K+       
Sbjct: 30  LQKNFIPYSSISTTF-HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M + G+NPN                                    V++N LIN +
Sbjct: 89  SLSQQMEFEGINPN-----------------------------------FVTFNILINCF 113

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+   +  A S+ +++L  G +P ++T NT   G     Q+ +AL   D++       D 
Sbjct: 114 CQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ 173

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +Y   I+GLCK G    AL+L R +     +LN V YN +IDG+
Sbjct: 174 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGM 218


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  310 bits (795), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 169/481 (35%), Positives = 269/481 (55%), Gaps = 51/481 (10%)

Query: 72  ERCKSSGQGDI---------NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH 122
           ER  +S  GD          ++I  ++A+ +F  M++  P P  V  FN L   +AK   
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNK 98

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           ++ V+SL +++ + G+  D+YT+SI INCFC+  ++S    VL ++++  + P+ VT +S
Sbjct: 99  FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158

Query: 183 LIKGLCAESRIMEAAALFTK-----------------HRVF------------------A 207
           L+ G C   RI +A AL  +                 H +F                   
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PD+ TY T++NGLC+ G   +ALNL  +M           K N V +NTIID LCK  
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYR 272

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A +LF +M+ + I P+VVTY S+I   C    W++A RL   M+++ + P+VVTF+
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K GK+ +A +L E MI R ++P+T TYN LI+G+C+ +++D A+++F  M S 
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C+ ++ +YNTLIN +CK K VE+ + L+ EM  +G+    VTY T+  G F+    + A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +F +M  N V  D  TY+  + GLC  G +  AL +F+ ++ S+ ELNI  YN +I+G
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512

Query: 508 L 508
           +
Sbjct: 513 M 513



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 169/346 (48%), Gaps = 38/346 (10%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN +   L K +H +  + LF  + + G+ P++ T++ LINC C  GR S    +L  +L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN VTF +LI     E +++EA  L  +    + +PD  TYN LING C      
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +F+ M + +      C PN  TYNT+I+G CK   V+   ELF +M    +  + V
Sbjct: 381 EAKQMFKFMVSKD------CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA------- 342
           TYT++I+GF  A D + A+ +F +M+   V  D++T+S+++  LC  GK+D A       
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494

Query: 343 ------------SRLLELMIWRG-------------VNPNTYTYNTLIDGYCLTDKIDHA 377
                       + ++E M   G             + P+  TYNT+I G C    +  A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
             LF  M+ +G + +  +YNTLI    ++ D   +  L  EM S G
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 130/255 (50%), Gaps = 11/255 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F +M+      P + ++N L     K K  +  + LF+ ++  GL  +  T++ 
Sbjct: 380 DEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I  F + G      +V  +++ +    + +T++ L+ GLC+  ++  A  +F   +   
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            E ++F YNT+I G+C+ G    A +LF  ++          KP+ VTYNT+I GLC + 
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKR 549

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A +LF KMK++   P+  TY ++IR      D   +  L  EM   G   D  T S
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609

Query: 328 VIMDELCKNGKMDKA 342
           ++ + L  +G++DK+
Sbjct: 610 LVTNML-HDGRLDKS 623


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 163/404 (40%), Positives = 243/404 (60%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+  FN +    AK KHY T +SL  RL   G+ PD++T +ILINCFC MG+++ GF V
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +IL+  + P+ VT  +LIKGLC + ++ +A     K      + +  +Y TLING+C+
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A+ L  ++       G + KPN   Y+TIID LCK   V +A  LF +M  + I
Sbjct: 425 IGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 478

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + DVVTY+++I GFC      EA  L  EM+ + + PDV T+++++D L K GK+ +A  
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L +M+   V P+ +TYNTL++GY L  ++  A+ +F +M   G   DV +Y  LIN +C
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 598

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K V+EAL+L+ EM  K + P  VTY++L  GL +  ++     L DEMR     AD  
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ IDGLCK+G + +A+ LF  ++D     N  ++  L+DGL
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 207/405 (51%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N L   L         L    +L + G   +  +++ LIN  CK+G       
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L +I      PN   ++++I  LC    + EA  LF++  V     DV TY+TLI G C
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A+ L  EM            P+  TY  ++D L KEG V +AK +   M    
Sbjct: 494 IVGKLKEAIGLLNEMVLKT------INPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC 547

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDV TY +++ G+    +  +A+ +F  M   GV PDV T++++++  CK+  +D+A 
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M  + + P+T TY++L+DG C + +I +   L   M   G   DV++YN+LI+  
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CKN  +++A++L+++M  +GI+P   T+  L  GL +  +++ A ++F ++       D 
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDV 727

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y YN  I G CK G + EAL +   + ++    N V+++ +I+ L
Sbjct: 728 YIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 6/352 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  ++ +   L K +       LF  +   G+  D+ T+S LI  FC +G++    
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     P+  T+T L+  L  E ++ EA ++         +PDVFTYNTL+NG 
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                   A ++F  M+      GV   P+  TY  +I+G CK   VD+A  LF +M  +
Sbjct: 563 LLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ PD VTY+S++ G C +   +    L  EM D+G   DV+T++ ++D LCKNG +DKA
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKA 676

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L   M  +G+ PNT+T+  L+DG C   ++  A+++F  + + G   DV  YN +I  
Sbjct: 677 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYG 736

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +CK   +EEAL++ S+M   G  P  VT++ +   LF+  + ++A KL  +M
Sbjct: 737 HCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 193/379 (50%), Gaps = 40/379 (10%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL +IL+  + P+ VT  +LIKGLC + ++ EA     K      + +  +Y TLING+C
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G T  A+    ++       G + KPN   YNTIID LCK   V +A  LF +M  + 
Sbjct: 110 RIGDTRAAIKFLRKID------GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKG 163

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+ +VVTY+++I GFC      EA  L   M+ + + P+V T+++++D LCK GK+ +A 
Sbjct: 164 ISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAK 223

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L +M+   V  N  TY+TL+DGY L  ++  A+ +F +M   G   DV SYN +IN +
Sbjct: 224 SVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGF 283

Query: 404 CKNKDVEEALSLYSEML----------------------------------SKGIKPTVV 429
           CK K V++AL+L+ EM+                                   KGI+P + 
Sbjct: 284 CKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF 343

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           T N L      + Q+     +  ++ +      T T N  I GLC  G V +AL     +
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 403

Query: 490 RDSKYELNIVSYNCLIDGL 508
               ++LN VSY  LI+G+
Sbjct: 404 LAQGFQLNQVSYATLINGV 422



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 183/337 (54%), Gaps = 7/337 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M     S   V+   +++G     K  + +  L   +    + PD+ T++I
Sbjct: 464 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI-GLLNEMVLKTINPDVRTYTI 522

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   K G+V     VL  +L++C  P+  T+ +L+ G      + +A  +F    +  
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV TY  LING C++     ALNLF+EM   N        P+TVTY++++DGLCK G
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN------MVPDTVTYSSLVDGLCKSG 636

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +    +L  +M+D     DV+TY S+I G C     ++A  LF +M DQG++P+  TF+
Sbjct: 637 RISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT 696

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK G++  A  + + ++ +G + + Y YN +I G+C    ++ A  +   ME N
Sbjct: 697 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEEN 756

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           GC+ + V+++ +IN   K  + ++A  L  +M+++G+
Sbjct: 757 GCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 195/432 (45%), Gaps = 63/432 (14%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T++IL++  CK G+V     VL  +L++C   N +T+++L+ G      + +A  +
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----EFGVV------- 248
           F    +    PDV +YN +ING C+      ALNLF+EM         +F  +       
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKM 320

Query: 249 -----------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
                             +P+  T N +I+  C  G +     +  K+      P  VT 
Sbjct: 321 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTL 380

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I+G C      +A     +++ QG Q + V+++ +++ +CK G    A +LL  +  
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC------- 404
           R   PN   Y+T+ID  C    +  A  LF  M   G   DVV+Y+TLI  +C       
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500

Query: 405 ----------------------------KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
                                       K   V+EA S+ + ML   +KP V TYNTL  
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G   +++V++A  +F+ M    V  D +TY   I+G CKS  V EAL LF+ +       
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620

Query: 497 NIVSYNCLIDGL 508
           + V+Y+ L+DGL
Sbjct: 621 DTVTYSSLVDGL 632



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 190/405 (46%), Gaps = 7/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N L   L         L    +L + G   +  +++ LIN  C++G       
Sbjct: 60  PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            L +I      PN   + ++I  LC    + EA  LF++  V     +V TY+TLI G C
Sbjct: 120 FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC 179

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    AL L   M            PN  TYN ++D LCKEG V +AK +   M    
Sbjct: 180 IVGKLKEALGLLNVMVLKT------INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKAC 233

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  +V+TY++++ G+    +  +A+ +F  M   GV PDV +++++++  CK  ++DKA 
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKAL 293

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + MI     P    +N ++D +        A  L   +E  G   D+ + N LIN +
Sbjct: 294 NLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCF 352

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    +    S+ +++L +G  P+ VT NTL  GL    QV++AL   D++       + 
Sbjct: 353 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 412

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +Y   I+G+CK G    A++L R I     + N+  Y+ +ID L
Sbjct: 413 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 193/406 (47%), Gaps = 7/406 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  +N +   L K +       LF  +   G+  ++ T+S LI  FC +G++    
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     PN  T+  L+  LC E ++ EA ++         + +V TY+TL++G 
Sbjct: 189 GLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGY 248

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                   A ++F  M+      GV   P+  +YN +I+G CK   VDKA  LF +M   
Sbjct: 249 FLVYEVKKAQHVFNAMS----LMGVT--PDVHSYNIMINGFCKIKRVDKALNLFKEMILS 302

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              P ++ +  ++  F     ++ A  L   +  +G+QPD+ T +++++  C  G++   
Sbjct: 303 RF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFG 361

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +L  ++ RG  P+T T NTLI G CL  ++  A      + + G   + VSY TLIN 
Sbjct: 362 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 421

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK  D   A+ L  ++  +  KP V  Y+T+   L +   V  A  LF EM    ++AD
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY+  I G C  G + EA+ L   +       ++ +Y  L+D L
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 156/302 (51%), Gaps = 7/302 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ + + M+ +    P V ++ IL   L K        S+   +  A + PD++T++ L
Sbjct: 500 EAIGLLNEMV-LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTL 558

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +  +  V     V   +     TP+  T+T LI G C    + EA  LF +      
Sbjct: 559 MNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNM 618

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TY++L++GLC++G      +L +EM +  G+       + +TYN++IDGLCK G 
Sbjct: 619 VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRD-RGQ-----PADVITYNSLIDGLCKNGH 672

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA  LF KMKD+ I P+  T+T ++ G C      +A+ +F +++ +G   DV  ++V
Sbjct: 673 LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK G +++A  +L  M   G  PN  T++ +I+     D+ D A KL   M + G
Sbjct: 733 MIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792

Query: 389 CM 390
            +
Sbjct: 793 LL 794



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%)

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +N D   +LS+ +++L +G  P  VT NTL  GL    QV+ AL   D++       +  
Sbjct: 40  QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +Y   I+G+C+ G    A++  R I     + N+  YN +ID L
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDAL 143


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 156/415 (37%), Positives = 249/415 (60%), Gaps = 6/415 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F+ +L      P +  F  + G L K+ HY TV+SL +++   G+  D+   SILINCF 
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           ++G+    F VL +IL+  + PN +T T+LIKGLC + +I +A     K        +  
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +Y TLINGLC+ G T  AL L   +       G + +PN V YNTIID +CK   V++A 
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAF 232

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L+ +M  + I+PDVVTY ++I GFC      +A  LF +M+ + + P+V TF++++D  
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  ++ +A  +L +M+ +G+ P+ +TYN+L+D YCL  +++ A+ +F ++   G   ++
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            SY+ +I+ +CK K V+EA++L+ EM    I P VVTYN+L  GL ++ ++  ALKL DE
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M    V  D  TYN+ +D LCK+  V +A+ L   ++D   + +I +Y  L+DGL
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 186/350 (53%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   + K K  +    L+  + S G+ PD+ T++ LI+ FC +G++     +
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN  TF  L+ G C E R+ EA  +         +PDVFTYN+L++  C 
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL 329

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  ++    + GV   PN  +Y+ +I G CK   VD+A  LF +M   NI
Sbjct: 330 VKEVNKAKHIFNTIS----QRGV--NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S+I G C     + A +L  EM D+GV  D +T++ I+D LCKN ++DKA  
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M   G+ P+  TY TL+DG C   +++ AR +F  +   G + DV  Y  +I  +C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +   +E+L L S+M   G  P  VTY  +   LF+  + ++A KL  EM
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 81/173 (46%)

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + K +  S    L+  +   P+ + +  ++     ++       L   ME NG   D+V 
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            + LIN + +      + S+ +++L  G +P V+T  TL  GL    Q+ +AL+  D++ 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                 +  +Y   I+GLCK G    AL+L R +     + N+V YN +ID +
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  310 bits (793), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 162/422 (38%), Positives = 245/422 (58%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M+   P P  VS F+ L   L   KHY +V+S+F+ ++   +  D +  S 
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVS-FSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVF 206
           ++N  C M R   GF VL    +     N VTFT+LI+GL AE+++ +A  LF K  R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            CEPD   Y T+++GLC+ GHT  A +L   M  G      + KP+T  YN +ID  CK+
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQG------ITKPDTCIYNIVIDAFCKD 226

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D A  L  +MK +NI PD++TYTS+I G    + W + + LF+EM+   + PDV TF
Sbjct: 227 GMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTF 286

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LCK GK++ A  ++  MI +GV PN  TYN ++DGYCL  ++  AR++F SM  
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMID 346

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D++SY  LIN Y + K +++A+ L+ E+   G+KP++VT + L  GLFE+ + E 
Sbjct: 347 KGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTEC 406

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A   FDEM+      + YT+   + G  K+G V EA+  F  +   + + NI  Y  +I+
Sbjct: 407 AKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIN 466

Query: 507 GL 508
           GL
Sbjct: 467 GL 468



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 204/418 (48%), Gaps = 6/418 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  ++R +   P    +  +   L K  H      L + +      PD   ++I+
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIV 219

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK G +     +L  + +    P+ +T+TSLI GL   S+  +   LF +      
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNI 279

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV T+N++I+GLC+ G    A    EE+     E GV  +PN +TYN ++DG C  G 
Sbjct: 280 YPDVCTFNSVIDGLCKEGKVEDA----EEIMTYMIEKGV--EPNEITYNVVMDGYCLRGQ 333

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A+ +F  M D+ I PD+++YT++I G+      ++A +LF E+   G++P +VT SV
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSV 393

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  L + G+ + A    + M   G  PN YT+ TL+ GY     ++ A   F  +E   
Sbjct: 394 LLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++  Y  +IN  CKN  +++A + + ++   G+ P V+TY  +  G  +   ++ A 
Sbjct: 454 EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +  +M  N    D  TYN  + G  +S  V E     + I    +     +   L+D
Sbjct: 514 DMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 36/275 (13%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A  LF +M      P  V+++ +++   +   ++    +F E+    +  D    S 
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS----- 383
           +++  C   + D    +L +   +G+  N  T+ TLI G    +K+  A  LF       
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 384 -------------------------------MESNGCMHDVVSYNTLINWYCKNKDVEEA 412
                                          ME      D   YN +I+ +CK+  ++ A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            SL +EM  K I P ++TY +L  GL ++ Q E+   LF EM   ++  D  T+N+ IDG
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LCK G V +A E+   + +   E N ++YN ++DG
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDG 327


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/462 (35%), Positives = 264/462 (57%), Gaps = 42/462 (9%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N +  ++A+ +F  M++  P P  V  F+ L   +AK   +D V+SL +++ + G+  +
Sbjct: 57  LNDLKLDDAVNLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------- 194
           +YT+SILINCFC+  ++S    VL ++++  + P+ VT  SL+ G C  +RI        
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175

Query: 195 ----------------------------EAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
                                       EA AL  +  V  C+PD+ TY  ++NGLC+ G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              +AL+L ++M  G  E      P  V YNTIID LC    V+ A  LF +M ++ I P
Sbjct: 236 DIDLALSLLKKMEQGKIE------PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VVTY S+IR  C    W++A RL  +M+++ + P+VVTFS ++D   K GK+ +A +L 
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + MI R ++P+ +TY++LI+G+C+ D++D A+ +F  M S  C  +VV+YNTLI  +CK 
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K V+E + L+ EM  +G+    VTY TL  G F+  + + A  +F +M  + V  D  TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +DGLC +G V  AL +F  ++ SK E +I +YN +I+G+
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 208/387 (53%), Gaps = 12/387 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GDI+L     AL +   M       P V  +N +   L   K+ +  L+LF  +++ G+
Sbjct: 234 RGDIDL-----ALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P++ T++ LI C C  GR S    +L  ++     PN VTF++LI     E +++EA  
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ +    + +PD+FTY++LING C       A ++FE M + +      C PN VTYNT
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNT 401

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G CK   VD+  ELF +M    +  + VTYT++I GF  A + + A+ +F +M+  G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V PD++T+S+++D LC NGK++ A  + E +    + P+ YTYN +I+G C   K++   
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF S+   G   +VV+Y T+++ +C+    EEA +L+ EM  +G  P   TYNTL    
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYT 465
                   + +L  EMR      D  T
Sbjct: 582 LRDGDKAASAELIREMRSCRFVGDAST 608



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 8/255 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M+      P V ++N L     K K  D  + LF+ ++  GL  +  T++ 
Sbjct: 378 DEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F +     +  +V  +++     P+ +T++ L+ GLC   ++  A  +F   +   
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD++TYN +I G+C+ G      +LF  ++      GV  KPN VTY T++ G C++G
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK----GV--KPNVVTYTTMMSGFCRKG 550

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A  LF +MK+E   PD  TY ++IR      D   +  L  EM       D  T  
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 610

Query: 328 VIMDELCKNGKMDKA 342
           ++ + L  +G++DK+
Sbjct: 611 LVTNML-HDGRLDKS 624


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 270/479 (56%), Gaps = 50/479 (10%)

Query: 73  RCKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
           R  SSG GD   I  N        +A+ +F  M++  P P  V  FN L   +AK K +D
Sbjct: 44  RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 102

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+SL +++    +   +YT++ILINCFC+  ++S    +LG++++  + P+ VT +SL+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 185 KGLCAESRIMEAAALFTK-----------------HRVF------------------ACE 209
            G C   RI +A AL  +                 H +F                   C+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P++ TY  ++NGLC+ G T +ALNL  +M     E       + V +NTIID LCK   V
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHV 276

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A  LF +M+ + I P+VVTY+S+I   C    W++A +L  +M+++ + P++VTF+ +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K GK  +A +L + MI R ++P+ +TYN+L++G+C+ D++D A+++F  M S  C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DVV+YNTLI  +CK+K VE+   L+ EM  +G+    VTY TL  GLF     + A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F +M  + V  D  TY+  +DGLC +G + +ALE+F  ++ S+ +L+I  Y  +I+G+
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 192/356 (53%), Gaps = 6/356 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN +   L K +H D  L+LFK + + G+ P++ T+S LI+C C  GR S    +L  ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN VTF +LI     E + +EA  L+      + +PD+FTYN+L+NG C      
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +FE M + +      C P+ VTYNT+I G CK   V+   ELF +M    +  D V
Sbjct: 383 KAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYT++I+G  +  D + A+++F +M+  GV PD++T+S+++D LC NGK++KA  + + M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
               +  + Y Y T+I+G C   K+D    LF S+   G   +VV+YNT+I+  C  + +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           +EA +L  +M   G  P   TYNTL            + +L  EMR      D  T
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 7/407 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M++     P + ++ ++   L K    D  L+L  ++ +A +  D+   + 
Sbjct: 207 SEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   V     +   +      PN VT++SLI  LC+  R  +A+ L +      
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ T+N LI+   + G  + A  L+++M   +        P+  TYN++++G C   
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS------IDPDIFTYNSLVNGFCMHD 379

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +DKAK++F  M  ++  PDVVTY ++I+GFC +    +   LF EM  +G+  D VT++
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  L  +G  D A ++ + M+  GV P+  TY+ L+DG C   K++ A ++F  M+ +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+  Y T+I   CK   V++   L+  +  KG+KP VVTYNT+  GL     ++ A
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             L  +M+ +    ++ TYN  I    + G    + EL R +R  ++
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  ++D M++     P + ++N L      +   D    +F+ + S   FPD+ T++ L
Sbjct: 348 EAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FCK  RV  G  +   +       + VT+T+LI+GL  +     A  +F +      
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK--------- 250
            PD+ TY+ L++GLC  G    AL +F+ M     +  +         +CK         
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTYNT+I GLC +  + +A  L  KMK++   P+  TY ++IR   
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              D   +  L  EM       D  T  ++ + L  +G++DK+
Sbjct: 587 RDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 270/479 (56%), Gaps = 50/479 (10%)

Query: 73  RCKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
           R  SSG GD   I  N        +A+ +F  M++  P P  V  FN L   +AK K +D
Sbjct: 6   RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 64

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+SL +++    +   +YT++ILINCFC+  ++S    +LG++++  + P+ VT +SL+
Sbjct: 65  VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 124

Query: 185 KGLCAESRIMEAAALFTK-----------------HRVF------------------ACE 209
            G C   RI +A AL  +                 H +F                   C+
Sbjct: 125 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 184

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P++ TY  ++NGLC+ G T +ALNL  +M     E       + V +NTIID LCK   V
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHV 238

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A  LF +M+ + I P+VVTY+S+I   C    W++A +L  +M+++ + P++VTF+ +
Sbjct: 239 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K GK  +A +L + MI R ++P+ +TYN+L++G+C+ D++D A+++F  M S  C
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DVV+YNTLI  +CK+K VE+   L+ EM  +G+    VTY TL  GLF     + A K
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F +M  + V  D  TY+  +DGLC +G + +ALE+F  ++ S+ +L+I  Y  +I+G+
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 477



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 192/356 (53%), Gaps = 6/356 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN +   L K +H D  L+LFK + + G+ P++ T+S LI+C C  GR S    +L  ++
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN VTF +LI     E + +EA  L+      + +PD+FTYN+L+NG C      
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +FE M + +      C P+ VTYNT+I G CK   V+   ELF +M    +  D V
Sbjct: 345 KAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYT++I+G  +  D + A+++F +M+  GV PD++T+S+++D LC NGK++KA  + + M
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
               +  + Y Y T+I+G C   K+D    LF S+   G   +VV+YNT+I+  C  + +
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           +EA +L  +M   G  P   TYNTL            + +L  EMR      D  T
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 574



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 7/407 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M++     P + ++ ++   L K    D  L+L  ++ +A +  D+   + 
Sbjct: 169 SEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 227

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   V     +   +      PN VT++SLI  LC+  R  +A+ L +      
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ T+N LI+   + G  + A  L+++M   +        P+  TYN++++G C   
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS------IDPDIFTYNSLVNGFCMHD 341

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +DKAK++F  M  ++  PDVVTY ++I+GFC +    +   LF EM  +G+  D VT++
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 401

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  L  +G  D A ++ + M+  GV P+  TY+ L+DG C   K++ A ++F  M+ +
Sbjct: 402 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 461

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+  Y T+I   CK   V++   L+  +  KG+KP VVTYNT+  GL     ++ A
Sbjct: 462 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 521

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             L  +M+ +    ++ TYN  I    + G    + EL R +R  ++
Sbjct: 522 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 568



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  ++D M++     P + ++N L      +   D    +F+ + S   FPD+ T++ L
Sbjct: 310 EAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 368

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FCK  RV  G  +   +       + VT+T+LI+GL  +     A  +F +      
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK--------- 250
            PD+ TY+ L++GLC  G    AL +F+ M     +  +         +CK         
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTYNT+I GLC +  + +A  L  KMK++   P+  TY ++IR   
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              D   +  L  EM       D  T  ++ + L  +G++DK+
Sbjct: 549 RDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 590


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 171/501 (34%), Positives = 272/501 (54%), Gaps = 46/501 (9%)

Query: 49  TSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVS 108
           T  ++ +L    +D  S +   +        G   +    +A+ +F  MLR  P P  V 
Sbjct: 24  TGSIRHALAEKSRDGESGEAGFRGESLKLRSGSYEIKGLEDAIDLFSDMLRSRPLPS-VI 82

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
            FN L G + + +  D V+SL++++    +  DIY+ +ILI CFC   ++       G++
Sbjct: 83  DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +    P+ VTFT+L+ GLC + R+ EA  LF  H++  C PDV T+ TL+NGLCR G  
Sbjct: 143 TKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF--HQI--CRPDVLTFTTLMNGLCREGRV 198

Query: 229 IVALNLFEEMA---------------NGNGEFGVVC---------------KPNTVTYNT 258
           + A+ L + M                +G  + G                  KPN V Y+ 
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           IIDGLCK+G    +  LF++M+D+ I P++VTY  +I GFC +  W+ A+RL  EM+++ 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + P+VVT++ +++   K GK  +A+ L + M+ RG+ PNT TYN++IDG+C  D++D A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +F  M + GC  DV ++ TLI+ YC  K +++ + L  EM  +G+    VTYNTL  G 
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-- 496
             +  +  AL L  +M  + V  D  T N  +DGLC +G + +ALE+F+A++ SK +L  
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498

Query: 497 ---------NIVSYNCLIDGL 508
                    ++++YN LI GL
Sbjct: 499 SHPFNGVEPDVLTYNILICGL 519



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 211/429 (49%), Gaps = 17/429 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M  +    P V  ++ +   L K+  +    +LF  +   G+FP+I T++ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             FC  GR S    +L  +L    +PN VT+ +LI     E +  EAA L+ +       
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN++I+G C+      A ++F  MA         C P+  T+ T+IDG C    +
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRI 409

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D   EL  +M    +  + VTY ++I GFC   D N A  L  +M+  GV PD+VT + +
Sbjct: 410 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 469

Query: 330 MDELCKNGKMDKASRLLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +D LC NGK+  A  + + M            + GV P+  TYN LI G     K   A 
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 529

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L+  M   G + D ++Y+++I+  CK   ++EA  ++  M SK   P VVT+NTL  G 
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +  +V+  L+LF EM R  + AD   Y   I G  K G +  AL++F+ +  S    + 
Sbjct: 590 CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDT 649

Query: 499 VSYNCLIDG 507
           ++   ++ G
Sbjct: 650 ITIRNMLTG 658



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 187/362 (51%), Gaps = 17/362 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K   +     L+  +   G+ P+  T++ +I+ FCK  R+     +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P+  TFT+LI G C   RI +   L  +        +  TYNTLI+G C 
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-- 282
            G    AL+L ++M +       VC P+ VT NT++DGLC  G +  A E+F  M+    
Sbjct: 441 VGDLNAALDLSQQMISSG-----VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 283 ---------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
                     + PDV+TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++D L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  ++D+A+++   M  +  +PN  T+NTLI+GYC   ++D   +LF  M   G + D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  G +   ++ERA+ + ++
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 454 MR 455
           ++
Sbjct: 675 LQ 676



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 17/301 (5%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           Y++      P V +F  L       K  D  + L   +   GL  +  T++ LI+ FC +
Sbjct: 382 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-----------TKHR 204
           G ++    +  +++ S   P+ VT  +L+ GLC   ++ +A  +F             H 
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               EPDV TYN LI GL   G  + A  L+EEM +     G+V  P+T+TY+++IDGLC
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR----GIV--PDTITYSSMIDGLC 555

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K+  +D+A ++F+ M  ++ +P+VVT+ ++I G+C A   ++   LF EM  +G+  D +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            +  ++    K G ++ A  + + MI  GV P+T T   ++ G+   ++++ A  +   +
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675

Query: 385 E 385
           +
Sbjct: 676 Q 676


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  308 bits (789), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 164/479 (34%), Positives = 270/479 (56%), Gaps = 50/479 (10%)

Query: 73  RCKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
           R  SSG GD   I  N        +A+ +F  M++  P P  +  FN L   +AK K +D
Sbjct: 44  RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFD 102

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+SL +++   G+  ++YT++ILINCFC+  ++S    +LG++++  + P+ VT +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 185 KGLCAESRIMEAAALFTK-----------------HRVF------------------ACE 209
            G C   RI +A AL  +                 H +F                   C+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P++ TY  ++NGLC+ G   +A NL  +M     E       N V Y+T+ID LCK    
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHE 276

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A  LF +M+++ + P+V+TY+S+I   C    W++A RL  +M+++ + P+VVTF+ +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K GK+ +A +L + MI R ++P+ +TY++LI+G+C+ D++D A+ +F  M S  C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +VV+YNTLIN +CK K ++E + L+ EM  +G+    VTY TL  G F+    + A  
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F +M  + V  +  TYN  +DGLCK+G + +A+ +F  ++ SK E  I +YN +I+G+
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 195/350 (55%), Gaps = 16/350 (4%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +GDI+L         F+ + +M  +     V  ++ +   L K +H D  L+LF  + + 
Sbjct: 238 RGDIDLA--------FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++ T+S LI+C C   R S    +L  ++     PN VTF +LI     E +++EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L+ +    + +PD+FTY++LING C       A ++FE M + +      C PN VTY
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTY 403

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I+G CK   +D+  ELF +M    +  + VTYT++I GF  A D + A+ +F +M+ 
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV P+++T++ ++D LCKNGK++KA  + E +    + P  YTYN +I+G C   K++ 
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
              LF S+   G   DV+ YNT+I+ +C+    EEA +L+ +M   G  P
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 156/420 (37%), Positives = 250/420 (59%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F+ +LR +P+PP +  F  + G L K+KHY TVLSLF+++   G+ P+    +IL
Sbjct: 53  DAVSLFNCLLRQNPTPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNIL 111

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCFC++G +   F VL +IL+  + P+ +T  + IKG C + +I +A     K      
Sbjct: 112 INCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGF 171

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D  +Y TLINGLC+ G T  AL L   +       G + + + V Y+TIID +CK+  
Sbjct: 172 HLDQVSYGTLINGLCKVGETRAALELLRRVD------GKLVQLDVVMYSTIIDSMCKDKN 225

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A +L+ +M    I+ ++VTY+++I GFC      +A  LF +M  + + PDV TF++
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK G++ +A   L +M+ +G+ P+  TYN+L+DGYCL ++++ A+ +  +M   G
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               V SYN +IN +CK K V++A+ L+ EM  K I P V+TYN+L  GL +  ++  AL
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L D M       D  TY++ +D LCK+  V +A+ L   ++D     N+ +Y  LIDGL
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 181/348 (52%), Gaps = 6/348 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  ++ +   + K+K+ +    L+  + S  +  +I T+S LI+ FC +G++     +  
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++      P+  TF  L+   C E R+ EA            +PD+ TYN+L++G C   
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                +N+ + + N     GV       +YN +I+G CK   VD+A +LF +M  + I P
Sbjct: 330 E----VNMAKSILNTMSHRGVT--ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP 383

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +V+TY S+I G C +   + A  L   M D+G QPD++T+S I+D LCKN  +DKA  LL
Sbjct: 384 NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +  +G+ PN YTY  LIDG C   +++ AR +F  +   G    V +Y  +I  +C +
Sbjct: 444 IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
              +EALSL S+M      P  +TY  +   LF+  + ++A KL  EM
Sbjct: 504 GLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREM 551



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 182/346 (52%), Gaps = 7/346 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  ++  M+    S   V+   ++ G     K  D +  LF ++ S  + PD+YT +I
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI-GLFNKMTSENINPDVYTFNI 285

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK GRV      L  +++    P+ VT+ SL+ G C  + +  A ++        
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
               V +YN +ING C+      A+ LF+EM +          PN +TYN++IDGLCK G
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ------IFPNVITYNSLIDGLCKSG 399

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A EL   M D    PD++TY+S++   C  +  ++A  L I++ DQG++P++ T++
Sbjct: 400 RISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYT 459

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK G+++ A  + E ++ +G N    TY  +I G+C     D A  L   M+ N
Sbjct: 460 ILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDN 519

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            C+ D ++Y  +I       + ++A  L  EM+++G+  + + Y +
Sbjct: 520 SCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS 565



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 51/336 (15%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+NI+     K K  D  + LFK ++   +FP++ T++ LI+  CK GR+S+   ++ 
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID 409

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ +T++S++  LC    + +A AL  K +     P+++TY  LI+GLC+ G
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A N+FE++        V       TY  +I G C  G  D+A  L  KMKD +  P
Sbjct: 470 RLEDARNIFEDLLVKGYNLTVN------TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP 523

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS------------------- 327
           D +TY  +I      ++ ++A++L  EM+ +G+    + +                    
Sbjct: 524 DAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSL 583

Query: 328 -------------VIMDE------LCKNGKMDKASRLLELMIW-------RGVNPNTYTY 361
                        ++++       L K+   DK      ++I+       +G   +  TY
Sbjct: 584 QCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTY 643

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             +I G+C     D +  L   ME NGC+ D V+Y+
Sbjct: 644 TVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 98/207 (47%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           ND  +A  LF  ++ Q   P  + F  I+  L K+        L + M +RG+ PN   +
Sbjct: 49  NDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNF 108

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LI+ +C    I  A  +   +   G   D ++ NT I  +C    + +AL+ + ++++
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G     V+Y TL  GL ++ +   AL+L   +    V  D   Y+  ID +CK   V +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A +L+  +   +   NIV+Y+ LI G 
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGF 255


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 171/501 (34%), Positives = 272/501 (54%), Gaps = 46/501 (9%)

Query: 49  TSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVS 108
           T  ++ +L    +D  S +   +        G   +    +A+ +F  MLR  P P  V 
Sbjct: 24  TGSIRHALAEKSRDGESGEAGFRGESLKLRSGSYEIKGLEDAIDLFSDMLRSRPLPS-VI 82

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
            FN L G + + +  D V+SL++++    +  DIY+ +ILI CFC   ++       G++
Sbjct: 83  DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +    P+ VTFT+L+ GLC + R+ EA  LF  H++  C PDV T+ TL+NGLCR G  
Sbjct: 143 TKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF--HQI--CRPDVLTFTTLMNGLCREGRV 198

Query: 229 IVALNLFEEMA---------------NGNGEFGVVC---------------KPNTVTYNT 258
           + A+ L + M                +G  + G                  KPN V Y+ 
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           IIDGLCK+G    +  LF++M+D+ I P++VTY  +I GFC +  W+ A+RL  EM+++ 
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + P+VVT++ +++   K GK  +A+ L + M+ RG+ PNT TYN++IDG+C  D++D A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +F  M + GC  DV ++ TLI+ YC  K +++ + L  EM  +G+    VTYNTL  G 
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-- 496
             +  +  AL L  +M  + V  D  T N  +DGLC +G + +ALE+F+A++ SK +L  
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 498

Query: 497 ---------NIVSYNCLIDGL 508
                    ++++YN LI GL
Sbjct: 499 SHPFNGVEPDVLTYNILICGL 519



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 211/429 (49%), Gaps = 17/429 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M  +    P V  ++ +   L K+  +    +LF  +   G+FP+I T++ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             FC  GR S    +L  +L    +PN VT+ +LI     E +  EAA L+ +       
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN++I+G C+      A ++F  MA         C P+  T+ T+IDG C    +
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRI 409

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D   EL  +M    +  + VTY ++I GFC   D N A  L  +M+  GV PD+VT + +
Sbjct: 410 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 469

Query: 330 MDELCKNGKMDKASRLLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +D LC NGK+  A  + + M            + GV P+  TYN LI G     K   A 
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 529

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L+  M   G + D ++Y+++I+  CK   ++EA  ++  M SK   P VVT+NTL  G 
Sbjct: 530 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 589

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +  +V+  L+LF EM R  + AD   Y   I G  K G +  AL++F+ +  S    + 
Sbjct: 590 CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDT 649

Query: 499 VSYNCLIDG 507
           ++   ++ G
Sbjct: 650 ITIRNMLTG 658



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 188/363 (51%), Gaps = 17/363 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K   +     L+  +   G+ P+  T++ +I+ FCK  R+     +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P+  TFT+LI G C   RI +   L  +        +  TYNTLI+G C 
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-- 282
            G    AL+L ++M +       VC P+ VT NT++DGLC  G +  A E+F  M+    
Sbjct: 441 VGDLNAALDLSQQMISSG-----VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 283 ---------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
                     + PDV+TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++D L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  ++D+A+++   M  +  +PN  T+NTLI+GYC   ++D   +LF  M   G + D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  G +   ++ERA+ + ++
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 454 MRR 456
           ++R
Sbjct: 675 LQR 677



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 17/301 (5%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           Y++      P V +F  L       K  D  + L   +   GL  +  T++ LI+ FC +
Sbjct: 382 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 441

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-----------TKHR 204
           G ++    +  +++ S   P+ VT  +L+ GLC   ++ +A  +F             H 
Sbjct: 442 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               EPDV TYN LI GL   G  + A  L+EEM +     G+V  P+T+TY+++IDGLC
Sbjct: 502 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR----GIV--PDTITYSSMIDGLC 555

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K+  +D+A ++F+ M  ++ +P+VVT+ ++I G+C A   ++   LF EM  +G+  D +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            +  ++    K G ++ A  + + MI  GV P+T T   ++ G+   ++++ A  +   +
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675

Query: 385 E 385
           +
Sbjct: 676 Q 676


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  307 bits (787), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 163/421 (38%), Positives = 251/421 (59%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A+  F+ MLRM P PPP+  F  + G L K KHY  V+ LF+R+   G+  +  T +I
Sbjct: 31  NDAIDSFNRMLRMRP-PPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +C + +++  F V  +IL+  + P+ +T+T+LI+GLC   ++ E+     +     
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  +Y TLINGLC+ G T  AL L  ++       G +C+P+ V YNTIIDGLCK+ 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIE------GEICRPDVVMYNTIIDGLCKDK 203

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A +L+ +M ++ + P+VVTYTS+I GFC     ++A  L  EM+ + V P+V TF+
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFN 263

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LCK GKM +A  L+ +M+  GV P+ +TYN L+DGY L  +   A+ +F  M   
Sbjct: 264 TLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM 323

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV SY+ +I+   K K ++EA+ L+  M ++ + P VV Y++L  GL +  ++  A
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LK  DEM       +  TY + ID LCKS  V +A+ L + I+D   + N+ +YN L+DG
Sbjct: 384 LKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443

Query: 508 L 508
           L
Sbjct: 444 L 444



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 194/350 (55%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L K+K       L+  +    +FP++ T++ LI  FC +G++   F +
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN  TF +L+ GLC E ++ EA +L          PDVFTYN L++G   
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 306

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A N+F  MA    + GV C  +  +Y+ +I GL K   +D+A +LF  M++EN+
Sbjct: 307 VKEAGKAKNVFNIMA----QMGVTC--DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVV Y+S+I G C +   N A +   EM D+G  P+V+T++ ++D LCK+ ++DKA  
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ +  +G+  N YTYN L+DG C   ++  A+K+F  +   G   DVV+Y+ +IN  C
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K    +EAL+L S+M  KG  P  + Y T+    FE    ++A KL  EM
Sbjct: 481 KESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 2/147 (1%)

Query: 96  YMLRMHP--SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           Y+  MH    PP V ++  L   L K+   D  ++L K++   G+  ++YT++IL++  C
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC 445

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K GR++    V   +L      + VT++ +I GLC ES   EA  L +K     C PD  
Sbjct: 446 KDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAI 505

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMAN 240
            Y T+IN          A  L  EM +
Sbjct: 506 AYETIINAFFEKDMNDKAEKLLREMID 532


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 162/404 (40%), Positives = 233/404 (57%), Gaps = 7/404 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++ L  F+ MLR HP PPP+  F+ L G + +  HY T +SLF +L+S G+ P I T 
Sbjct: 35  TVDDTLLSFNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATL 93

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILINC+C    +S  F +LG IL+  F PN VTF +LI G C    + +A A       
Sbjct: 94  TILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA 153

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                D F+Y +LINGLC+ G T  AL L ++M         + +PN +TY+T+IDGLCK
Sbjct: 154 KGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED------LVRPNLITYSTVIDGLCK 207

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  +  A  LF  +    I  DVV Y S+I G C    W EA RL   M+   + PD  T
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F++++D LCK G++ +A  +  +M+ RG  P+  TYN L++G+CL++ +  AR+LF  M 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   DV++YN LIN YCK   V+EA+ L+ E+  K + P + TYN+L  GL ++ ++ 
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
              +L DEM     + D  TYN F+D  CKS    +A+ LFR I
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI 431



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 208/404 (51%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L      N      ++    L + G   D +++  LIN  CK G+      +
Sbjct: 123 PNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQL 182

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      PN +T++++I GLC +  I +A  LF+         DV  YN+LI+G C 
Sbjct: 183 LQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCS 242

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L   M  GN        P+  T+N ++D LCKEG + +A+ +F  M     
Sbjct: 243 VGQWREATRLLTMMVRGN------INPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VTY +++ GFC +N+ +EA+ LF  M+ +G++PDV+ ++V+++  CK   +D+A  
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + +  + + PN  TYN+LIDG C   ++   ++L   M   G   D+V+YN  ++ +C
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC 416

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K  E+A+SL+ +++ +GI P    Y+ +     +  +++ A +    +  +    +  
Sbjct: 417 KSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVR 475

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+ LCK     EA+ L   + D+    + V++  +I  L
Sbjct: 476 TYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGAL 519



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 186/358 (51%), Gaps = 7/358 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +++ +   L K++     L LF  + S G+  D+  ++ LI+  C +G+      +
Sbjct: 193 PNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRL 252

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++R    P+  TF  L+  LC E RI+EA  +F        +PD+ TYN L+ G C 
Sbjct: 253 LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCL 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           + +   A  LF  M     E      P+ + YN +I+G CK   VD+A  LF +++ +N+
Sbjct: 313 SNNVSEARELFNRMVKRGLE------PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++ TY S+I G C     +  + L  EM D+G  PD+VT+++ +D  CK+   +KA  
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L    I +G+ P+ Y Y+ +++ +C  +K+  A +    +  +GC  +V +Y  +IN  C
Sbjct: 427 LFR-QIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           K+   +EA++L S+M      P  VT+ T+   L E ++ ++A KL  EM    +  D
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 41/389 (10%)

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K   V    +   R+LR    P    F  L+  +        A +LF++       P + 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           T   LIN  C   H   A +L   +     + G   +PN VT+NT+I+G C  G V KA 
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTIL----KMGF--QPNMVTFNTLINGFCINGMVSKAM 145

Query: 274 -----------------------------------ELFLKMKDENINPDVVTYTSVIRGF 298
                                              +L  KM+++ + P+++TY++VI G 
Sbjct: 146 AFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGL 205

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      +A RLF  +  +G+  DVV ++ ++   C  G+  +A+RLL +M+   +NP+ 
Sbjct: 206 CKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDD 265

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           YT+N L+D  C   +I  A+ +F  M   G   D+V+YN L+  +C + +V EA  L++ 
Sbjct: 266 YTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNR 325

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ +G++P V+ YN L  G  +I  V+ A+ LF E+R  ++  +  TYN+ IDGLCK G 
Sbjct: 326 MVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGR 385

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +    EL   + D     +IV+YN  +D 
Sbjct: 386 MSCVQELVDEMCDRGQSPDIVTYNIFLDA 414



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 29/262 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M++     P + ++N L      + +      LF R+   GL PD+  +++L
Sbjct: 283 EAQGVFAVMMK-RGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN +CK+  V    V+   I      PN  T+ SLI GLC   R+     L  +      
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQ 401

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG----------------NGEFGVV---- 248
            PD+ TYN  ++  C++     A++LF ++  G                 GE   +    
Sbjct: 402 SPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEA 461

Query: 249 --------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                   C PN  TY  +I+ LCK+   D+A  L  KM D +  PD VT+ ++I     
Sbjct: 462 LQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQE 521

Query: 301 ANDWNEAKRLFIEMMDQGVQPD 322
            N+ ++A++L +EM+++G+  D
Sbjct: 522 RNETDKAEKLRLEMIERGLVND 543


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 261/473 (55%), Gaps = 46/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           KER +S G  DI     ++A+ +F  MLR  P  P V  FN LFG LA+ K YD VL+L 
Sbjct: 59  KERLRS-GLVDIK---KDDAVALFQSMLRSRP-LPTVIDFNRLFGLLARTKQYDLVLALC 113

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K++   G+  D+YT +I+INCFC+  ++   F  +G+I +  + PN VTF +L+ GLC E
Sbjct: 114 KQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLE 173

Query: 191 SRIMEAAAL-----FTKH----------------------------RVFA--CEPDVFTY 215
            R+ EA  L      ++H                            R+ A  C+P+ FTY
Sbjct: 174 GRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTY 233

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             ++N +C++G+T  AL+L  +M +         KP+ VTY  IID LCK+G +D A   
Sbjct: 234 GPILNRMCKSGNTASALDLLRKMEHRK------IKPHVVTYTIIIDNLCKDGRLDDALSF 287

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+ + I  +V TY S+I  FC    W++  +L  +M+ + + P+VVTFS ++D L K
Sbjct: 288 FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK 347

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A  L   MI RG+ PNT TYN+LI G C   ++D A ++   M S GC  D+ +
Sbjct: 348 EGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWT 407

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YN LIN +CK K V++ + L+ +M  +G+    VTY+TL  G  +  ++  A K+F EM 
Sbjct: 408 YNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMV 467

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              V     TY   +DGLC +G + EAL +   +   K EL+I  YN +I G+
Sbjct: 468 SQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 199/416 (47%), Gaps = 43/416 (10%)

Query: 95  DYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           D + RM  +   P   ++  +   + K+ +  + L L +++    + P + T++I+I+  
Sbjct: 216 DLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNL 275

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR+         +       N  T+ SLI   C+  R  + A L          P+V
Sbjct: 276 CKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNV 335

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE------ 266
            T++ LI+ L + G    A +L+ EM     E      PNT+TYN++I GLC +      
Sbjct: 336 VTFSALIDSLVKEGKLTEAKDLYNEMITRGIE------PNTITYNSLIYGLCNDKRLDEA 389

Query: 267 ------------------------GF-----VDKAKELFLKMKDENINPDVVTYTSVIRG 297
                                   GF     VD    LF KM    +  D VTY+++I+G
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC +     AK++F EM+ QGV P ++T+++++D LC NG++++A  +L+ M    +  +
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
              YN +I G C  +K+D A  LF S+ S G   D+ SYN +++  CK   + EA +L+ 
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFR 569

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           +M   G +P   TYNTL       + +  +++L +EM+R   ++D  T    +D L
Sbjct: 570 KMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 162/416 (38%), Positives = 244/416 (58%), Gaps = 6/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ +L  +   PP   F  + G L K K Y T LSL +++   G+ PD  T ++L+NCF
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            ++G +   F V  +IL+  + P+AVTFT LIKGLC +  + +A     K      + D 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            +Y TLINGLCR G T  A+ L   +       G + +PN V Y+TIID +CK+  V+ A
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVD------GKLVRPNVVMYSTIIDSMCKDKLVNDA 217

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L+ +M  + I+PDVVTY+S+I GFC       A  LF  M+   + P+V TFS+++D 
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK GK+ +A  +L +M+ + V  +  TYN+L+DGYCL  +++ A+ LF  M   G   D
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V SY+ +IN +CK K V+EA+ L+ EM  K I P VVTYN+L  GL +  +   AL+L D
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM      ++  TYN+ +D +CK+  V +A+ L   I++   + +I +Y  LI+GL
Sbjct: 398 EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453



 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 217/404 (53%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F IL   L         L    ++ + G   D  ++  LIN  C++G       +
Sbjct: 126 PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQL 185

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+      PN V ++++I  +C +  + +A  L+ +       PDV TY++LI+G C 
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++LF  M + N        PN  T++ +IDG CKEG V +AK +   M  +N+
Sbjct: 246 VGKLKYAVDLFNRMISDN------INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV 299

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DVVTY S++ G+C     N+AK LF  M  +GV PDV ++S++++  CK   +D+A +
Sbjct: 300 KLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMK 359

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M  + + PN  TYN+L+DG C + +   A +L   M   G   ++++YN++++  C
Sbjct: 360 LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAIC 419

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  V++A+ L +++  KGI+P + TY  L  GL ++ +++ A K+F+++     + + Y
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIY 479

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + I+G C  GF  E L +   ++D+    N ++Y  LI  L
Sbjct: 480 TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 192/341 (56%), Gaps = 15/341 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N+A  ++  M+    SP  V+  +++ G C+     Y   + LF R+ S  + P++YT S
Sbjct: 215 NDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKY--AVDLFNRMISDNINPNVYTFS 272

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI+ FCK G+V     VL  +++     + VT+ SL+ G C   ++ +A +LF      
Sbjct: 273 ILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR 332

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGL 263
              PDV++Y+ +ING C+      A+ LFEEM          CK   PN VTYN+++DGL
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH---------CKQIFPNVVTYNSLVDGL 383

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G    A EL  +M D     +++TY S++   C  N  ++A  L  ++ ++G+QPD+
Sbjct: 384 CKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDI 443

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++V+++ LCK G++D A ++ E ++ +G +PN YTY +LI+G+C     D    +   
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSK 503

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           M+ NGC+ + ++Y  LI+   +  + ++A  L  EM+++G+
Sbjct: 504 MKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 191/350 (54%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   + K+K  +    L+  + S  + PD+ T+S LI+ FC +G++ +   +
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++     PN  TF+ LI G C E ++ EA  +         + DV TYN+L++G C 
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +LF  MA    + GV   P+  +Y+ +I+G CK   VD+A +LF +M  + I
Sbjct: 316 VKQVNKAKSLFNVMA----QRGVT--PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY S++ G C +   + A  L  EM D+G   +++T++ I+D +CKN  +DKA  
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  +G+ P+ +TY  LI+G C   ++D A+K+F  +   G   ++ +Y +LIN +C
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
                +E L++ S+M   G  P  +TY  L   LFE  + ++A KL  EM
Sbjct: 490 NKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  305 bits (780), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 183/504 (36%), Positives = 288/504 (57%), Gaps = 43/504 (8%)

Query: 36   SSISENEPSYPTTTSKLKESLRLTVKDRASL---KKFLKERCKSSGQGDINLITPNEALC 92
            SS+ +N P    + SK ++     +  +ASL   +++++++C+        +I  N+A+ 
Sbjct: 884  SSLFKNPPQRSGSNSKSEK-----IGTKASLSPFERYVRDQCR------FGIIKLNDAIK 932

Query: 93   IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
            +FD  L   P P    +FN L   +AK  +Y TV  +++++N  G+ PD+YT +ILI+C 
Sbjct: 933  LFDRSLCSEPMPC-TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCC 991

Query: 153  CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            C +  V  GF V G  L+  F P+AVT T+L+KG+  E+ I +A  LF +        D 
Sbjct: 992  CSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDA 1051

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGE---FGVV----CK-------------- 250
             TY  LINGLC+   T +A+ L E+M  N  G+   +G++    CK              
Sbjct: 1052 KTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEM 1111

Query: 251  ------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                  P+ V Y++++DGLC+ G + +A E F +M+   I+ DV TY S+I G   A  W
Sbjct: 1112 IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLW 1171

Query: 305  NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             E       M+D+G  PD  TF++++D LCK GK+ +A ++LELM  +G  P+  TYNTL
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL 1231

Query: 365  IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
            ++G CL  +++ A KLF S+   G   +V SYN LIN YCK++ ++EA   + EM  KG+
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291

Query: 425  KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            KP+ VTYNTL   L +  +V  A KLF EM+         TY   +DGLCK+G + EA++
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351

Query: 485  LFRAIRDSKYELNIVSYNCLIDGL 508
            LF++I+ ++++ NI  ++ L+DG+
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGM 1375



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 219/407 (53%), Gaps = 17/407 (4%)

Query: 107  VSSFNILFGCLAKNKHYDTVLSLFKRL--NSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
              ++ IL   L K +     + L +++  N  G   D++T+ ++I+  CK G  +    +
Sbjct: 1051 AKTYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDALCKDGMTTEALDM 1107

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               ++ +   P+ V ++SL+ GLC   R+ EA   F +        DV+TYN+LI+GL R
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167

Query: 225  TG---HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
             G        LNL  +             P+  T+  +IDGLCKEG V +A+++   M+ 
Sbjct: 1168 AGLWKEVTWFLNLMVDRG---------FSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218

Query: 282  ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            +   PD++TY +++ G C      +A +LF  + D+G++ +V +++++++  CK+ K+D+
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 1278

Query: 342  ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            A R  E M  +G+ P+T TYNTLI   C + ++  A+KLFV M++ G    + +Y  L++
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 1338

Query: 402  WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              CKN  +EEA+ L+  +     KP +  ++ L  G+    ++E A K FDE+ +N +  
Sbjct: 1339 GLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEP 1398

Query: 462  DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            DT  YN  I+GLC  G + EA++L   + +     + +++N +I  L
Sbjct: 1399 DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 193/374 (51%), Gaps = 7/374 (1%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            EAL +F  M+     P  V  ++ L   L +       L  FK +   G+  D+YT++ L
Sbjct: 1103 EALDMFSEMIGAGILPD-VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSL 1161

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            I+   + G        L  ++   F+P+A TFT LI GLC E ++ EA  +    R    
Sbjct: 1162 IHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGK 1221

Query: 209  EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            EPD+ TYNTL+NGLC  G    A  LFE +A+         K N  +YN +I+G CK+  
Sbjct: 1222 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRG------IKLNVFSYNILINGYCKDQK 1275

Query: 269  VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +D+A   F +M+ + + P  VTY ++I   C +     A++LF+EM   G    + T+ V
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            ++D LCKNG +++A  L + +      PN   ++ L+DG C   K++ A K F  +  NG
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395

Query: 389  CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               D ++YN LIN  C    + EA+ L  +M  KG  P  +T+N +   L + +++  A+
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455

Query: 449  KLFDEMRRNHVAAD 462
            +L +EMR  + + D
Sbjct: 1456 QLLEEMRNRNFSPD 1469



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 6/388 (1%)

Query: 107  VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
            V ++ ++   L K+      L +F  +  AG+ PD+  +S L++  C+ GR+        
Sbjct: 1085 VFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 1144

Query: 167  RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
             +     + +  T+ SLI GL       E              PD FT+  LI+GLC+ G
Sbjct: 1145 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 1204

Query: 227  HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                A  + E M +   E      P+ +TYNT+++GLC  G ++ A +LF  + D  I  
Sbjct: 1205 KVGEAQQILELMRHKGKE------PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258

Query: 287  DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            +V +Y  +I G+C     +EA R F EM  +G++P  VT++ ++  LC++G++  A +L 
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 1318

Query: 347  ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
              M   G      TY  L+DG C    ++ A  LF S++      ++  ++ L++  C+ 
Sbjct: 1319 VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRA 1378

Query: 407  KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              +EEA   + E+   G++P  + YN L  GL     +  A+KL  +M       D+ T+
Sbjct: 1379 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 1438

Query: 467  NNFIDGLCKSGFVLEALELFRAIRDSKY 494
            N  I  L K   + EA++L   +R+  +
Sbjct: 1439 NVIIQNLLKENEIHEAIQLLEEMRNRNF 1466


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  304 bits (779), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 171/473 (36%), Positives = 264/473 (55%), Gaps = 46/473 (9%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           KER ++ G  DI +   NEA+ +F+ M++  P P  +  F+ LF  +A+ K YD VL   
Sbjct: 38  KERLRN-GIVDIKV---NEAIDLFESMIQSRPLPSLID-FSKLFSAVARRKEYDLVLGFC 92

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           K ++  G+  ++YT +I+INCFC+  ++   F V+GR L+  F PN +TF++LI G C E
Sbjct: 93  KEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLE 152

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGL---------------------------- 222
            R+ EA AL  +       P+V T NTLINGL                            
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212

Query: 223 -------CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
                  C++G+T +AL+LF +M   +       K + V Y+ +ID LCK+G +D A  L
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERS------IKASVVQYSIVIDSLCKDGNLDDALSL 266

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+ + I  DVV Y+S+I G C    W++  ++  EM+ + + P+VVTFS ++D   K
Sbjct: 267 FNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVK 326

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+ +A  L   M+ RG+ P+T TY++LIDG+C  +++  A ++   M S GC  ++V+
Sbjct: 327 EGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVT 386

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+ LIN YCK K V+  + L+ E+ SKG+    VTYNTL  G  +  ++  A +LF EM 
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              V     TY   +DGLC +G + +ALE+F  ++ S+  L I  YN +I G+
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
             V  ++I+   L K+ + D  LSLF  +   G+  D+  +S +I   C  GR   G  +
Sbjct: 242 ASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKM 301

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN VTF++LI     E +++EA  L+ +       PD  TY++LI+G C+
Sbjct: 302 LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK 361

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + + M +        C+PN VTY+ +I+  CK   VD    LF ++  + +
Sbjct: 362 ENRLGEANQMLDLMVSKG------CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D VTY ++++GFC +   N AK LF EM+ +GV P VVT+ +++D LC NG++ KA  
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E M    +      YN +I G C   K+D A  LF S+   G   DV++YN +I   C
Sbjct: 476 IFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA  L+ +M   G  P+  TYN L         V  +++L +EM+    AAD  
Sbjct: 536 KKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAS 595

Query: 465 T 465
           T
Sbjct: 596 T 596



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 173/351 (49%), Gaps = 7/351 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +F+ M  M      V +++ + G L  +  +D    + + +    + P++ T S 
Sbjct: 261 DDALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F K G++     +   ++     P+ +T++SLI G C E+R+ EA  +        
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CEP++ TY+ LIN  C+       + LF E+++     G+V   +TVTYNT++ G C+ G
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSK----GLV--ADTVTYNTLVQGFCQSG 433

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ AKELF +M    + P VVTY  ++ G C   +  +A  +F +M    +   +  ++
Sbjct: 434 KLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYN 493

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+  +C   K+D A  L   +  +GV P+  TYN +I G C    +  A  LF  M+ +
Sbjct: 494 IIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKED 553

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           GC     +YN LI  +     V  ++ L  EM  +G      T   + + L
Sbjct: 554 GCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 106/220 (48%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V+Y   +R        NEA  LF  M+     P ++ FS +   + +  + D      + 
Sbjct: 35  VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+  N YT N +I+ +C   K+  A  +       G   + ++++TLIN +C    
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V EA++L   M+    +P VVT NTL  GL    +V  AL L D M +    A+  TY  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++ +CKSG    AL+LFR + +   + ++V Y+ +ID L
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSL 254


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  304 bits (778), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 176/518 (33%), Positives = 280/518 (54%), Gaps = 56/518 (10%)

Query: 44  SYPTTTSKLKESLRL--TVKDRASLKKFLKERCKSSGQGDI--------NLITPNEALCI 93
            +  ++S  + + RL  T   R +L K   E C++   G+          +    +A+ +
Sbjct: 7   GFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDL 66

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F  MLR  P P  V  F  L G + + +  D V+SL++++    +  DIY+ +ILI CFC
Sbjct: 67  FSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPD 211
              ++       G+I +    P+ VTFT+L+ GLC E R+ EA   F  H++F   C P+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF--HQMFETTCRPN 183

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK------------ 250
           V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK            
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 251 ---------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                    PN V Y+ IID LCK+G    A+ LF +M+++ I PD+ TY S+I GFC +
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             W++A++L  EM+++ + PDVVT++ +++   K GK  +A+ L + M+ RG+ PNT TY
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 363

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N++IDG+C  D++D A  +F  M + GC  DV ++ TLI+ YC  K +++ + L  EM  
Sbjct: 364 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 423

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G+    VTYNTL  G   +  +  AL L  +M  + V  D  T N  +DGLC +G + +
Sbjct: 424 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 483

Query: 482 ALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           ALE+F+A++ SK +L           ++++YN LI GL
Sbjct: 484 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 521



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 207/414 (50%), Gaps = 17/414 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+  +    +LF  +   G+FPD++T++ +I  FC  GR S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    +P+ VT+ +LI     E +  EAA L+ +       P+  TYN++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA         C P+  T+ T+IDG C    +D   EL  +M    +
Sbjct: 373 QDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + VTY ++I GFC   D N A  L  +M+  GV PD+VT + ++D LC NGK+  A  
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + + M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+NTL  G  +  +V+  L+LF E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           M R  + AD   Y   I G  K G +  AL++F+ +  S    + ++   ++ G
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 187/362 (51%), Gaps = 17/362 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K   +     L+  +   G+ P+  T++ +I+ FCK  R+     +
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P+  TFT+LI G C   RI +   L  +        +  TYNTLI+G C 
Sbjct: 383 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-- 282
            G    AL+L ++M +       VC P+ VT NT++DGLC  G +  A E+F  M+    
Sbjct: 443 VGDLNAALDLSQQMISSG-----VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 283 ---------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
                     + PDV+TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++D L
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  ++D+A+++   M  +  +PN  T+NTLI+GYC   ++D   +LF  M   G + D 
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 616

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  G +   ++ERA+ + ++
Sbjct: 617 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 676

Query: 454 MR 455
           ++
Sbjct: 677 LQ 678


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/421 (38%), Positives = 243/421 (57%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A+ +F+ ML M P PPP   FN +   L K + + T +SL K L+  G+  D+ T +I
Sbjct: 51  NDAVALFNRMLLMRP-PPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNI 109

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +G+++  F VL  IL+  + P+ +T T+LIKGLC    + +A           
Sbjct: 110 LINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALE 169

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  +Y TLINGLC+ G T  A+ L   +   +       KP+ V YN IID LCK  
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERS------IKPDVVMYNIIIDSLCKNK 223

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  L+ +M  + I P+VVTYT++I GFC      EA  L  EM  + + PDV TFS
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D L K GKM  A  +L +M+   V P+  TYN+L+DGY L +++ HA+ +F SM  +
Sbjct: 284 ILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS 343

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    V SY  +I+  CK K V+EA+SL+ EM  K + P  +T+N+L  GL +  ++   
Sbjct: 344 GVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYV 403

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L D+MR     AD  TY++ ID LCK+  + +A+ LF+ +   + + ++ +Y  LIDG
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDG 463

Query: 508 L 508
           L
Sbjct: 464 L 464



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 183/350 (52%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +NI+   L KNK      +L+  +N+  ++P++ T++ LI  FC MG +     +
Sbjct: 207 PDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVAL 266

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+  TF+ LI  L  E ++  A  +         +PDV TYN+L++G   
Sbjct: 267 LNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +F  MA      GV   P   +Y  +IDGLCK   VD+A  LF +MK +N+
Sbjct: 327 VNEVKHAKYVFNSMAQS----GVT--PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +T+ S+I G C +        L  +M D+    DV+T+S ++D LCKN  +D+A  
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIA 440

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + MI + + P+ YTY  LIDG C   ++  A+++F  +   G   D+ +Y  +I+ +C
Sbjct: 441 LFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFC 500

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K    +EAL+L S+M   G  P  +T++ +   LFE  + ++A KL  EM
Sbjct: 501 KAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREM 550



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 173/312 (55%), Gaps = 12/312 (3%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           + GCL +       ++L   +    + PD+YT SILI+   K G++    +VL  ++++ 
Sbjct: 256 IMGCLIE------AVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAY 309

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+ VT+ SL+ G    + +  A  +F         P V +Y  +I+GLC+T     A+
Sbjct: 310 VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAI 369

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +LFEEM + N        PNT+T+N++IDGLCK G +    +L  KM+D +   DV+TY+
Sbjct: 370 SLFEEMKHKN------VIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYS 423

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+I   C     ++A  LF +M+ Q +QPD+ T+++++D LCK G++  A  + + ++ +
Sbjct: 424 SLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIK 483

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G + +  TY  +I G+C     D A  L   ME NGC+ + ++++ +I    +  + ++A
Sbjct: 484 GYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKA 543

Query: 413 LSLYSEMLSKGI 424
             L  EM+++G+
Sbjct: 544 EKLLREMIARGL 555



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 7/302 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ + + M ++    P V +F+IL   L K         +   +  A + PD+ T++ L
Sbjct: 262 EAVALLNEM-KLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSL 320

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +  +  V H   V   + +S  TP   ++T +I GLC    + EA +LF + +    
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T+N+LI+GLC++G      +L ++M + +         + +TY+++ID LCK   
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQ------LADVITYSSLIDALCKNCH 434

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A  LF KM  + I PD+ TYT +I G C       A+ +F  ++ +G   D+ T++V
Sbjct: 435 LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK G  D+A  LL  M   G  PN  T++ +I      D+ D A KL   M + G
Sbjct: 495 MISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554

Query: 389 CM 390
            +
Sbjct: 555 LL 556



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 101/206 (49%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           ND N+A  LF  M+     P    F+ I+  L K  +   A  L + + ++G+  +  T 
Sbjct: 48  NDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTL 107

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LI+ +C   +I  +  +  ++   G   DV++  TLI   C   +V++AL  + ++++
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
              +   ++Y TL  GL +I + + A++L   +    +  D   YN  ID LCK+  V E
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDG 507
           A  L+  +   +   N+V+Y  LI G
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYG 253


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/422 (37%), Positives = 242/422 (57%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           +EAL +F  M RM P  P V  F +L G + + KHY T +SL K + +S G+  D  T +
Sbjct: 58  DEALDLFQGMARMKP-LPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLN 116

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+INC C++  V+ GF VLG + +    P  +T T+LI GLC +  + +A  L       
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKM 176

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               DV+TY  LINGLC+TG T+ A+    +M   N       KPN V Y+TI+DGLCK+
Sbjct: 177 WYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERN------WKPNVVVYSTIMDGLCKD 230

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V +A  L  +M  + + P++VTY  +I+G C    W EA  L  EMM  G++PD+   
Sbjct: 231 GLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQML 290

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D  CK GK+ +A  ++  MI  G  P+ +TYN+LI  YCL +K++ A ++F  M S
Sbjct: 291 NILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVS 350

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + D+V + +LI+ +CK+K++ +A+ L  EM   G  P V T+ TL  G  +  +   
Sbjct: 351 RGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLA 410

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +LF  M +     +  T    +DGLCK   + EA+ L +A+  S  +LNIV Y+ L+D
Sbjct: 411 AKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLD 470

Query: 507 GL 508
           G+
Sbjct: 471 GM 472



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 173/367 (47%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+      L+L   +N  G+ P++ T++ LI   C  GR      +
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSL 274

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    P+      L+   C E ++M+A ++     +    PDVFTYN+LI+  C 
Sbjct: 275 LDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL 334

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F  M +  G       P+ V + ++I G CK+  ++KA  L  +M     
Sbjct: 335 QNKMNEAMRVFHLMVS-RGRL-----PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGF 388

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV T+T++I GFC A     AK LF+ M   G  P++ T +VI+D LCK   + +A  
Sbjct: 389 VPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVS 448

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M    ++ N   Y+ L+DG C   K++ A +LF S+   G   +V  Y  +I   C
Sbjct: 449 LAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLC 508

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +++A  L   M   G  P   TYN    GL    ++ R++K    MR    + D  
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568

Query: 465 TYNNFID 471
           T    I+
Sbjct: 569 TTEFIIN 575



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 155/329 (47%), Gaps = 7/329 (2%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  N     EA  + D M++M   P  +   NIL     K        S+   +   G 
Sbjct: 260 QGLCNFGRWKEAGSLLDEMMKMGMRPD-LQMLNILVDAFCKEGKVMQAKSVIGFMILTGE 318

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD++T++ LI+ +C   +++    V   ++     P+ V FTSLI G C +  I +A  
Sbjct: 319 GPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMH 378

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L  +       PDV T+ TLI G C+ G  + A  LF  M     ++G V  PN  T   
Sbjct: 379 LLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMH----KYGQV--PNLQTCAV 432

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I+DGLCKE  + +A  L   M+  N++ ++V Y+ ++ G C A   N A  LF  +  +G
Sbjct: 433 ILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +Q +V  +++++  LCK G +DKA  LL  M   G  PN  TYN  + G     +I  + 
Sbjct: 493 LQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSI 552

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           K    M   G   D  +   +IN+   N+
Sbjct: 553 KYLTIMRDKGFSVDAATTEFIINYLSTNE 581


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 243/422 (57%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M+R  P P  V SF+ L   L   KHY +V+SLF+ ++   +    +  SI
Sbjct: 54  DDAFSLFRQMVRTKPLPS-VVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVF 206
           ++N  C M R   GF VL    +     N V F +L++GL AE+++ +A  LF K  R  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            CEP+   Y T++NGLC+ GHT  A +L   M  G+       KPNT  Y+ +ID  CK+
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNTCIYSIVIDAFCKD 226

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D A  L  +MK ++I PD+ TY+++I   C  + W   + LF+EM+   + P+V TF
Sbjct: 227 GMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF 286

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LCK GK++ A  ++  MI +GV+P+  TYN +IDGY L  ++D AR++F SM +
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                +++SYN LIN Y + K ++EA+ +  E+  KG+KP++VT N L  GLFE+ + + 
Sbjct: 347 KSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKS 406

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A   FDEM       D YT+   + G  K+G V EA+  F  +   + + NI  Y  +ID
Sbjct: 407 AQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVID 466

Query: 507 GL 508
           GL
Sbjct: 467 GL 468



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 201/418 (48%), Gaps = 6/418 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  ++R +   P    +  +   L K  H      L + +      P+   +SI+
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK G +     +L  + +    P+  T+++LI  LC  S+      LF +      
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNI 279

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V T+N++I+GLC+ G    A    EE+     E GV   P+ +TYN IIDG    G 
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDA----EEIMRYMIEKGV--DPDVITYNMIIDGYGLRGQ 333

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD+A+E+F  M +++I P++++Y  +I G+      +EA ++  E+  +G++P +VT +V
Sbjct: 334 VDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  L + G+   A    + M+  G  P+ YT+ TL+ GY     ++ A   F  +E   
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++  Y  +I+  CKN  +++A + + ++   G+ P V+TY  +  G  +   ++ A 
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +  +M  N   AD  TYN  + G  +S  V E       I    +     +   L+D
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 36/275 (13%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A  LF +M      P VV+++ +++   +   ++    LF E+    +       S+
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM---- 384
           +++  C   + D    +L +   +G+  N   +NTL+ G    +K+  A  LF  +    
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 385 --ESNGCMHDVVS------------------------------YNTLINWYCKNKDVEEA 412
             E N  M+  V                               Y+ +I+ +CK+  ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            SL +EM  K I P + TY+TL   L ++ Q E    LF EM   ++  +  T+N+ IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LCK G V +A E+ R + +   + ++++YN +IDG
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDG 327


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  301 bits (771), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 156/373 (41%), Positives = 227/373 (60%), Gaps = 6/373 (1%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           AGL P+  T +ILINCFC++ RV  GF VL + ++    P  VTFT+LI GL    +  +
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  LF       C+PD +TY T+INGLC+ G T +A  LF++M          C+ N VT
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG------CQLNVVT 117

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+T+I  LCK   V++A ++F  MK ++I+P + TYTS+I+G C  + W EA  L  EM 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              + P+VVTF+V++D  CK GK+  A  +L+ M   GV P+  TYN+L+ GY +  ++ 
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            ARKLF  M + GC  DV SY+ LIN YCK K ++EA  L++EM+ +G  P  V+YNTL 
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL ++ ++  A  LF  M  N    + YTY   +DG CK G++ +A  LFRA++ +  +
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 496 LNIVSYNCLIDGL 508
            N+V YN L++ +
Sbjct: 358 PNLVMYNILVNAM 370



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 216/403 (53%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L K   +   + LF  + + G  PD YT++ +IN  CK+G  +    +
Sbjct: 43  PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++  +    N VT+++LI  LC   R+ EA  +F+  +     P +FTY +LI GLC 
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L  EM + N        PN VT+N ++D  CKEG V  A+ +   M +  +
Sbjct: 163 FSRWKEASALLNEMTSLN------IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S++ G+    +  EA++LF  M+ +G +PDV ++S++++  CK  ++D+A +
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI +G  PN  +YNTLI G C   ++  A+ LF +M +NG + ++ +Y  L++ +C
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L+  M S  +KP +V YN L   + +   ++ A +LF E+    +  +  
Sbjct: 337 KQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQ 396

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            Y   I+GLCK G + EALE FR + D     +  SYN +I G
Sbjct: 397 IYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 216/406 (53%), Gaps = 7/406 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +FD M+     P   +   I+ G L K         LFK++  AG   ++ T+S L
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIING-LCKIGETALAAGLFKKMEEAGCQLNVVTYSTL 121

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK  RV+    +   +     +P   T+TSLI+GLC  SR  EA+AL  +      
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V T+N L++  C+ G  + A  + + M     E GV  +P+ VTYN+++ G      
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMT----EMGV--EPDVVTYNSLMYGYSMWTE 235

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A++LF  M  +   PDV +Y+ +I G+C A   +EAK+LF EM+ QG  P+ V+++ 
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+ G++ +A  L + M   G  PN YTY  L+DG+C    +  A +LF +M+S  
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++V YN L+N  CK+ ++++A  L+SE+   G++P V  Y T+  GL +   ++ AL
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           + F  M  +    D ++YN  I G  +      A+ L   +RD  +
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 461



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 175/336 (52%), Gaps = 7/336 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL IF YM +     P + ++  L   L     +    +L   + S  + P++ T ++
Sbjct: 132 NEALDIFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G+V     VL  +      P+ VT+ SL+ G    + ++EA  LF       
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PDVF+Y+ LING C+      A  LF EM +          PN V+YNT+I GLC+ G
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS------TPNNVSYNTLIHGLCQLG 304

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A++LF  M      P++ TY  ++ GFC      +A RLF  M    ++P++V ++
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ +CK+G +  A  L   +   G+ PN   Y T+I+G C    +D A + F +ME +
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDD 424

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           GC  D  SYN +I  + ++KD   A+ L  EM  +G
Sbjct: 425 GCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 74/125 (59%)

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ME  G   +  + N LIN +C+ + V+   S+ ++ +  G++PT+VT+ TL  GL ++ +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
             +A++LFD+M       D YTY   I+GLCK G    A  LF+ + ++  +LN+V+Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 504 LIDGL 508
           LI  L
Sbjct: 121 LIHSL 125


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  301 bits (770), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 162/440 (36%), Positives = 247/440 (56%), Gaps = 13/440 (2%)

Query: 70  LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           ++  CKS    +I+     EAL +F  M  M P  P V  F +L G + + KHY T +SL
Sbjct: 45  MRNLCKSGKVKNID-----EALDLFQGMASMKP-LPSVKDFTLLLGVIVRLKHYTTAISL 98

Query: 130 FKRL-NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
            K + +S G+  D  T +I+INC C++  V+ GF VLG + +    P  +T T+LI GLC
Sbjct: 99  VKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLC 158

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  + +A  L           DV+TY  LINGLC+TG T+ A+    +M   N      
Sbjct: 159 VQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERN------ 212

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            KPN V Y+TI+DGLCK+G V +A  L  +M  + + P++VTY  +I+G C    W E  
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETG 272

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM+  G++ D+ T ++++D  CK GK+ +A  ++  MI  G  P+ +TYN+LI  Y
Sbjct: 273 SLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIY 332

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           CL +K++ A ++F  M S GC+ D+V + +LI+ +CK+K++ + + L  EM   G  P V
Sbjct: 333 CLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDV 392

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VT+ TL  G  +  +   A +LF  M +     +  T    +DGLCK   + EA+ L  A
Sbjct: 393 VTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEA 452

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +  S  +LNIV Y+ L+DG+
Sbjct: 453 MEKSNLDLNIVIYSILLDGM 472



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 180/385 (46%), Gaps = 8/385 (2%)

Query: 83  NLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
            L    + L   +++ +M      P V  ++ +   L K+      L+L   ++  G+ P
Sbjct: 191 GLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRP 250

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           ++ T++ LI   C  GR      +L  +++     +  T   L+   C E ++M+A ++ 
Sbjct: 251 NLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVI 310

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
               +    PDVFTYN+LI+  C       A+ +F  M +        C P+ V + ++I
Sbjct: 311 GFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG------CLPDIVVFTSLI 364

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            G CK+  ++K   L  +M      PDVVT+T++I GFC A     AK LF+ M   G  
Sbjct: 365 HGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQV 424

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P++ T +VI+D LCK   + +A  L E M    ++ N   Y+ L+DG C   K++ A +L
Sbjct: 425 PNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWEL 484

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F S+   G   +V +Y  +I   CK   +++A  L   M   G  P   TYN    GL  
Sbjct: 485 FSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLT 544

Query: 441 IHQVERALKLFDEMRRNHVAADTYT 465
             ++ R++K    MR    + D  T
Sbjct: 545 KKEIARSIKYLTIMRDKGFSVDAAT 569



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 189/410 (46%), Gaps = 9/410 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ + D+M +M   P  V ++ +L   L K       +   +++      P++  +S +
Sbjct: 165 QAVGLVDHMEKMR-YPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTI 223

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G VS    +   +      PN VT+  LI+GLC   R  E  +L  +      
Sbjct: 224 MDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGM 283

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             D+ T N L++  C+ G  + A ++   M   G G       P+  TYN++I   C + 
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEG-------PDVFTYNSLIHIYCLQN 336

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  +F  M      PD+V +TS+I G+C   + N+   L  EM   G  PDVVT++
Sbjct: 337 KMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWT 396

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C+ G+   A  L   M   G  PN  T   ++DG C  + +  A  L  +ME +
Sbjct: 397 TLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKS 456

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               ++V Y+ L++  C    +  A  L+S +  KG++  V TY  +  GL +   +++A
Sbjct: 457 NLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKA 516

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             L   M  N    D  TYN F+ GL     +  +++    +RD  + ++
Sbjct: 517 EDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVD 566



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 152/329 (46%), Gaps = 7/329 (2%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  N     E   + D M++M      + + NIL     K        S+   +   G 
Sbjct: 260 QGLCNFGRWKETGSLLDEMIKMGMRLD-LQTLNILVDAFCKEGKVMQAKSVIGFMILTGE 318

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD++T++ LI+ +C   +++    V   ++     P+ V FTSLI G C +  I +   
Sbjct: 319 GPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMH 378

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L  +       PDV T+ TLI G C+ G  + A  LF  M     ++G V  PN  T   
Sbjct: 379 LLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMH----KYGQV--PNLQTCAV 432

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I+DGLCK   + +A  L   M+  N++ ++V Y+ ++ G C A   N A  LF  +  +G
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +Q +V T+++++  LCK G +DKA  LL  M   G  P+  TYN  + G     +I  + 
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSI 552

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           K    M   G   D  +    IN+   N+
Sbjct: 553 KYLTIMRDKGFSVDAATTEITINYLSTNE 581



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 16/327 (4%)

Query: 41  NEPSYPTTTSKLKESLRLTVK-DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLR 99
           N   +  T S L E +++ ++ D  +L   +   CK   +G +      +A  +  +M+ 
Sbjct: 264 NFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCK---EGKVM-----QAKSVIGFMI- 314

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           +    P V ++N L          +  + +F  + S G  PDI   + LI+ +CK   ++
Sbjct: 315 LTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNIN 374

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               +L  + +  F P+ VT+T+LI G C   R + A  LF     +   P++ T   ++
Sbjct: 375 KVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVIL 434

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +GLC+      A++L E M   N +       N V Y+ ++DG+C  G ++ A ELF  +
Sbjct: 435 DGLCKGNLLSEAVSLAEAMEKSNLDL------NIVIYSILLDGMCSAGKLNAAWELFSSL 488

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             + +  +V TYT +I+G C     ++A+ L I M + G  PD  T++V +  L    ++
Sbjct: 489 PGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEI 548

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLID 366
            ++ + L +M  +G + +  T    I+
Sbjct: 549 ARSIKYLTIMRDKGFSVDAATTEITIN 575



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 12/191 (6%)

Query: 326 FSVIMDELCKNGK---MDKASRLLELMIWRGVNPNTYTYNTLIDGYCL-----TDKIDHA 377
           F + M  LCK+GK   +D+A  L + M      P+   + TL+ G  +     T  I   
Sbjct: 41  FLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDF-TLLLGVIVRLKHYTTAISLV 99

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           + +F S+   G   D ++ N +IN  C+ K V    S+   M   G++PTV+T   L  G
Sbjct: 100 KHIFSSL---GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALING 156

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L     V +A+ L D M +     D YTY   I+GLCK+G  L A+E  R + +  ++ N
Sbjct: 157 LCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPN 216

Query: 498 IVSYNCLIDGL 508
           +V Y+ ++DGL
Sbjct: 217 VVVYSTIMDGL 227


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  301 bits (770), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 162/426 (38%), Positives = 242/426 (56%), Gaps = 6/426 (1%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           +L +   AL  F  M+ M+P P     F  LFG + K KHY T +SL K + S G+ PD+
Sbjct: 48  DLKSEEAALSFFHKMVVMNPLPRE-KDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDV 106

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           YT +I+INC C +     GF VLG + +    P  VTF +LI GLCAE  +  AA     
Sbjct: 107 YTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADS 166

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 + + +TY  +INGLC+ G T  A+   E++   N +  VV     + Y+TI+D 
Sbjct: 167 LEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVV-----IAYSTIMDS 221

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+G V +A  LF  M  + I PD+V Y S+I G C    W EA  L   MM +G+ P+
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V TF+V++D  CK+G + +A  ++  M+  GV P+  TYN++I G+CL  ++  A K+F 
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE 341

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   G + ++V+Y++LI+ +CK K++ +AL L  EM++ G+ P VVT++TL  G  +  
Sbjct: 342 LMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAG 401

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + E A +LF  M  +    +  T    +DGL K  F  EA+ LFR +     ELN+V YN
Sbjct: 402 KPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYN 461

Query: 503 CLIDGL 508
            ++DG+
Sbjct: 462 IVLDGM 467



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 200/405 (49%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L   L    +          L   G   + YT+  +IN  CK G  S   + 
Sbjct: 139 PTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILY 198

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L +I  R+C     + +++++  LC +  + EA  LF+       +PD+  YN+LI+GLC
Sbjct: 199 LEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLC 258

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A  L   M       G++  PN  T+N ++D  CK+G + +AK +   M    
Sbjct: 259 NFGRWKEATTLLGNMMRK----GIM--PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVG 312

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDVVTY SVI G C  +   +A ++F  M+ +G  P++VT+S ++   CK   ++KA 
Sbjct: 313 VEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKAL 372

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M+  G+NP+  T++TLI G+C   K + A++LF +M  +    ++ +   +++  
Sbjct: 373 FLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGL 432

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K +   EA+SL+ EM    ++  VV YN +  G+    ++  A +LF  +    +  D 
Sbjct: 433 FKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDV 492

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y   I GLCK G + +A  L   + ++    N  +YN  + GL
Sbjct: 493 VAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 181/359 (50%), Gaps = 6/359 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +++ +   L K+      L+LF  + S G+ PD+  ++ LI+  C  GR      +LG
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++R    PN  TF  L+   C +  I  A  +         EPDV TYN++I+G C   
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ +FE M +     G +  PN VTY+++I G CK   ++KA  L  +M +  +NP
Sbjct: 332 QMGDAVKVFELMIHK----GFL--PNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNP 385

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DVVT++++I GFC A     AK LF  M +    P++ T ++I+D L K     +A  L 
Sbjct: 386 DVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLF 445

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M    +  N   YN ++DG C   K++ A++LF  + S G   DVV+Y T+I   CK 
Sbjct: 446 REMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKE 505

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             +++A +L  +M   G  P   TYN    GL + + + R+ K    M+   ++AD  T
Sbjct: 506 GLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATT 564



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 181/365 (49%), Gaps = 12/365 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +F  M      P  V+ +N L   L     +    +L   +   G+ P++ T ++L
Sbjct: 230 EALNLFSGMTSKGIQPDLVA-YNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVL 288

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--TKHRVF 206
           ++ FCK G +S    ++G ++     P+ VT+ S+I G C  S++ +A  +F    H+ F
Sbjct: 289 VDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGF 348

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P++ TY++LI+G C+T +   AL L  EM N          P+ VT++T+I G CK 
Sbjct: 349 L--PNLVTYSSLIHGWCKTKNINKALFLLGEMVNSG------LNPDVVTWSTLIGGFCKA 400

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  + AKELF  M + + +P++ T   ++ G       +EA  LF EM    ++ +VV +
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIY 460

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D +C  GK++ A  L   +  +G+  +   Y T+I G C    +D A  L + ME 
Sbjct: 461 NIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEE 520

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NGC+ +  +YN  +    +  D+  +      M  KG+     T   L +  F  ++   
Sbjct: 521 NGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATT-TELLISYFSANKENS 579

Query: 447 ALKLF 451
           AL +F
Sbjct: 580 ALHVF 584


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 176/513 (34%), Positives = 280/513 (54%), Gaps = 51/513 (9%)

Query: 40  ENEPSYPTTTSKLKESLRLTVKDRASLKK--FLKERCK-SSGQGDINLITPNEALCIFDY 96
           E+  S P        S+R T+  ++S K   F  ER K  SG  +I  +  ++A+ +F Y
Sbjct: 9   ESSSSVPAARLFCTRSIRHTLAKKSSGKAGGFGGERLKLQSGFHEIKGL--DDAIDLFGY 66

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R  P P  V  F  L G + + +  D V+SL +++    +  +IY+ +ILI CFC   
Sbjct: 67  MVRSRPLPC-VIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCS 125

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++       G+I +  F P+ VTF++L+ GLC E R+ EA   F  H++  C+P+V  + 
Sbjct: 126 KLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF--HQI--CKPNVIAFT 181

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGE-----FGVVC---------------------- 249
           TL+NGLCR G  + A+ L + M     +     +G +                       
Sbjct: 182 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 241

Query: 250 ---KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              KPN V Y+ IIDGL K+G    A+ LF +M+++ I+P++ TY  +I GFC +  W+E
Sbjct: 242 SRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSE 301

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+RL  EM ++ + PDVVTFSV+++ L K GK  +A  L   M+ RG+ PNT TYN++ID
Sbjct: 302 AQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMID 361

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+   +++D A ++F  M + GC  DV++++ LI+ YC  K V++ + L  EM  +G+  
Sbjct: 362 GFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA 421

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             +TY TL  G  ++  +  AL L  EM  + V  +  T N  +DGLC +G + +ALE+F
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481

Query: 487 RAIRDSKYEL-----------NIVSYNCLIDGL 508
           + ++ SK +L           ++ +YN LI GL
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 213/430 (49%), Gaps = 17/430 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M  +    P V  ++ +   L K+       +LF  +   G+ P+++T++ +I
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N FC  GR S    +L  +     +P+ VTF+ LI  L  E +  EA  L+ +       
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGII 350

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN++I+G  +      A  +F  MA         C P+ +T++ +IDG C    V
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKG------CSPDVITFSILIDGYCGAKRV 404

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D   +L  +M    +  + +TYT++I GFC   + N A  L  EM+  GV P+VVT + +
Sbjct: 405 DDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTL 464

Query: 330 MDELCKNGKMDKASRLLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +D LC NGK+  A  + ++M            +  V P+  TYN LI G     K   A 
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAE 524

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L+  M   G + D ++YN++I+  CK   ++EA  ++  M SKG  P VVT+ TL  G 
Sbjct: 525 ELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGY 584

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++ +V   L++F EM R  + A+  TY   I G C+ G +  AL++F+ +  S    + 
Sbjct: 585 CKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDT 644

Query: 499 VSYNCLIDGL 508
           ++   ++ GL
Sbjct: 645 ITIRNMLTGL 654



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 190/356 (53%), Gaps = 17/356 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F++L   L K   +     L+  +   G+ P+  T++ +I+ F K  R+     +
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P+ +TF+ LI G C   R+ +   L  +        +  TY TLI+G C+
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-- 282
            G+   AL+L +EM +       VC PN VT NT++DGLC  G +  A E+F  M+    
Sbjct: 436 LGNLNAALDLLQEMISSG-----VC-PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 283 ---------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
                    ++ PDV TY  +I G      ++EA+ L+ EM  +G+ PD +T++ ++D L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  ++D+A+++ + M  +G +P+  T+ TLI+GYC   ++    ++F  M   G + + 
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           ++Y TLI+ +C+  ++  AL ++ EM+S G+ P  +T   +  GL+   +++RA++
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 52/297 (17%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           Y++      P V +F+IL       K  D  + L   ++  GL  +  T++ LI+ FC++
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-----------TKHR 204
           G ++    +L  ++ S   PN VT  +L+ GLC   ++ +A  +F             H 
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               EPDV TYN LI GL   G    A  L+EEM +     G+V  P+T+TYN++IDGLC
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR----GLV--PDTITYNSVIDGLC 550

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSV------------------------------ 294
           K+  +D+A ++F  M  +  +PDVVT+T++                              
Sbjct: 551 KQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAI 610

Query: 295 -----IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
                I GFC   + N A  +F EM+  GV PD +T   ++  L    ++ +A + L
Sbjct: 611 TYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 161/421 (38%), Positives = 241/421 (57%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N  +  F+ +L      PP+  FN +   L K KH+ T LSL +++   G+  D +T +I
Sbjct: 51  NNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNI 110

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCF ++G  S  F V G+IL+  F PNA+TF +LIKGLC +  I +A     K     
Sbjct: 111 LINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQG 170

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  +Y TLINGLC+ G    AL L + +       G + +PN V YN IID +CK  
Sbjct: 171 FHLDQVSYGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAK 224

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A +L+ +M  + I+PD  T  S+I GFC      EA  L  +M+ + + P + TFS
Sbjct: 225 LVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFS 284

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK GK+ +A  +L + + + +  +  TYN+L+DGYCL  +I+ A+ +F SM S 
Sbjct: 285 ILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASR 344

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + +V SY T+IN  CK K V+EA++L+ EM  + I P VVTYN+L  GL ++ ++   
Sbjct: 345 GVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCV 404

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LKL DEM       +  TYN+ +D LCK+  V +A+ L   ++D     ++ +Y  LI G
Sbjct: 405 LKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKG 464

Query: 508 L 508
           L
Sbjct: 465 L 465



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 188/363 (51%), Gaps = 7/363 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N++   + K K  +    L+ ++ +  + PD +T + LI  FC MG++     +
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGL 267

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++     P   TF+ L+   C E ++ EA  +           DV TYN+L++G C 
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F+ MA+     GV+   N  +Y T+I+GLCK   VD+A  LF +M+   I
Sbjct: 328 VKEINKAKDIFDSMASR----GVIA--NVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI 381

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY S+I G       +   +L  EM D+G  P+++T++ I+D LCKN  +DKA  
Sbjct: 382 IPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIA 441

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  +G+ P+ YTY  LI G C + K++ A+K+F  +   G   DV +Y  +I  +C
Sbjct: 442 LLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFC 501

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADT 463
                + AL+L S+M   G  P   TY  + L LFE  + + A KL  EM  R  +   +
Sbjct: 502 VKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKS 561

Query: 464 YTY 466
           Y Y
Sbjct: 562 YIY 564



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 182/340 (53%), Gaps = 13/340 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  ++  M+    SP   +  ++++G     +  + V  L  ++    + P +YT SI
Sbjct: 227 NDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAV-GLLHKMILENINPRMYTFSI 285

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G+V    ++LG  ++     + VT+ SL+ G C    I +A  +F       
Sbjct: 286 LVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRG 345

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLC 264
              +V +Y T+INGLC+      A+NLFEEM          C+   PN VTYN++IDGL 
Sbjct: 346 VIANVQSYTTMINGLCKIKMVDEAVNLFEEMR---------CRKIIPNVVTYNSLIDGLG 396

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G +    +L  +M D    P+++TY S++   C  +  ++A  L   + DQG++PD+ 
Sbjct: 397 KLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMY 456

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++V++  LC++GK++ A ++ E ++ +G N + YTY  +I G+C+    D A  L   M
Sbjct: 457 TYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKM 516

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           E NGC+ +  +Y  +I    +  + + A  L  EM+++G+
Sbjct: 517 EDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 161/464 (34%), Positives = 259/464 (55%), Gaps = 46/464 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F  MLR  P P  V  F  L G + + +  D V+SL++++    +  DIY+ +I
Sbjct: 61  EDAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           LI CFC   ++       G+I +    P+ VTFT+L+ GLC E R+ EA  LF  H++F 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF--HQMFE 177

Query: 207 -ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK------ 250
             C P+V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 251 ---------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                          PN V Y+ IID LCK+G    A+ LF +M+++ I PD+ TY S+I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC +  W++A++L  EM+++ + PDVVT++ +++   K GK  +A  L + M+ RG+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY+++IDG+C  +++D A  +F  M + GC  +++++NTLI+ YC  K +++ + L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM   G+     TYNTL  G + +  +  AL L  EM  + +  D  T +  +DGLC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 476 SGFVLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           +G + +ALE+F+ ++ SK +L           ++ +YN LI GL
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+  +    +LF  +   G+FPD++T++ +I  FC  GR S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    +P+ VT+ +LI     E +  EA  L+ +       P+  TY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA         C PN +T+NT+IDG C    +D   EL  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  TY ++I GF    D N A  L  EM+  G+ PD+VT   ++D LC NGK+  A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + ++M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+ TL  G  +  +V+  L+LF E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M R  + A+  TY   I G  K G +  AL++F+ +  S    + ++   ++ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---SHG 161
           P V ++N L     K   +     L+  +   G+ P+  T+S +I+ FCK  R+    H 
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F ++    + C +PN +TF +LI G C   RI +   L  +        D  TYNTLI+G
Sbjct: 383 FYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
               G    AL+L +EM +       +C P+ VT +T++DGLC  G +  A E+F  M+ 
Sbjct: 440 FYLVGDLNAALDLLQEMISSG-----LC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 282 E-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                        + PDV TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK  ++D+A+++ + M  +  +PN  T+ TLI+GYC   ++D   +LF  M   G +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + ++Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  GL+   +++RA+ +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 451 FDEMR 455
            ++++
Sbjct: 674 LEKLQ 678



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P VV F  +M  + +  + D    L + M  + +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y++N LI  +C   K+  A   F  +   G   DVV++ TL++  C    V EAL+L+
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     +P VVT+ TL  GL    ++  A+ L D M  + +     TY   +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 477 GFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
           G  + AL L R + +  + + N+V Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 160/415 (38%), Positives = 245/415 (59%), Gaps = 22/415 (5%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F  ML ++P+P  V  F  +   L K KHY TV+SLF +L   G+ P+I + SILINC+C
Sbjct: 59  FHRMLLLNPAPS-VIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYC 117

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
            +G++   F +  +IL+  + PN +T T+L+KG C   ++ EA              +  
Sbjct: 118 HLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQV 177

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +Y TLINGLC+ G T  AL +  ++       G +   + V Y+TIIDGLCK+  V+ A 
Sbjct: 178 SYGTLINGLCKIGETRAALQMLRQIE------GKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           EL+ +M  + I+P VVT  S+I G+C    + EA  L  EM+ + + PDV TF++++D L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK GK+ +A   + +M+  GV P+  TY++L+DGYCL ++++ A+ +             
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV------------- 338

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
             Y+ +IN +CK K V++ALSL+ EM  + I P  VTYN+L  GL +  ++  A +L DE
Sbjct: 339 --YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDE 396

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           MR +   AD  TYN+ ID LCK+  V +A+ L + I+D   +L++ +YN LIDGL
Sbjct: 397 MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGL 451



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 181/341 (53%), Gaps = 30/341 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N+A  ++  M+    SP  V+  ++++G C+     +     L + +    + PD+YT +
Sbjct: 228 NDAYELYSEMITKRISPTVVTLNSLIYGYCIVG--QFKEAFGLLREMVLKNINPDVYTFN 285

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           IL++  CK G++      +  +++    P+ VT++SL+ G C  + + +A     KH   
Sbjct: 286 ILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKA-----KH--- 337

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGL 263
                   Y+ +ING C+      AL+LF EM          C+   P+TVTYN++IDGL
Sbjct: 338 -------VYSIVINGFCKIKMVDKALSLFYEMR---------CRRIAPDTVTYNSLIDGL 381

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G +  A EL  +M+D     D++TY S+I   C  +  ++A  L  ++ DQG+Q D+
Sbjct: 382 CKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDM 441

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T+++++D LCK G++  A  + + ++ +G N   +TY  +I+G CL   ++ A  L   
Sbjct: 442 YTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSK 501

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           ME NGC+ D V+  T+I    +N   E A  L  EM+++G+
Sbjct: 502 MEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 189/405 (46%), Gaps = 29/405 (7%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           A  IF  +L+M   P  ++   ++ G CL  N      L     + + G   +  ++  L
Sbjct: 125 AFSIFAKILKMGYHPNTITLTTLVKGFCL--NHKVKEALHFHDHVLALGFHFNQVSYGTL 182

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  CK+G       +L +I     + + V ++++I GLC +  + +A  L+++      
Sbjct: 183 INGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRI 242

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V T N+LI G C  G    A  L  EM   N        P+  T+N ++D LCKEG 
Sbjct: 243 SPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN------INPDVYTFNILVDALCKEGK 296

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR------------------- 309
           + +AK     M  E + PDVVTY+S++ G+C  N+ N+AK                    
Sbjct: 297 IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKAL 356

Query: 310 -LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            LF EM  + + PD VT++ ++D LCK+G++  A  L++ M   G   +  TYN+LID  
Sbjct: 357 SLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDAL 416

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    +D A  L   ++  G   D+ +YN LI+  CK   +++A  ++ ++L KG   TV
Sbjct: 417 CKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTV 476

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            TY  +  GL     +  A  L  +M  N    D  T    I  L
Sbjct: 477 WTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 182/380 (47%), Gaps = 15/380 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL   D++L +      VS +  L   L K       L + +++    +  D+  +S +
Sbjct: 159 EALHFHDHVLALGFHFNQVS-YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTI 217

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK   V+  + +   ++    +P  VT  SLI G C   +  EA  L  +  +   
Sbjct: 218 IDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNI 277

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CKPNTV----- 254
            PDV+T+N L++ LC+ G    A +    M        VV         C  N V     
Sbjct: 278 NPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKH 337

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y+ +I+G CK   VDKA  LF +M+   I PD VTY S+I G C +   + A  L  EM
Sbjct: 338 VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEM 397

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            D G   D++T++ ++D LCKN  +DKA  L++ +  +G+  + YTYN LIDG C   ++
Sbjct: 398 RDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRL 457

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A+ +F  +   G    V +Y  +IN  C    + EA +L S+M   G  P  VT  T+
Sbjct: 458 KDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETI 517

Query: 435 FLGLFEIHQVERALKLFDEM 454
              LFE  + ERA KL  EM
Sbjct: 518 IRALFENDKNERAEKLLREM 537



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD     F +M   N  P V+ +  ++        +     LF ++   G++P++V+ S+
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C  G+M  A  +   ++  G +PNT T  TL+ G+CL  K+  A      + + G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 389 CMHDVVSYNTLIN-----------------------------------WYCKNKDVEEAL 413
              + VSY TLIN                                     CK+K V +A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            LYSEM++K I PTVVT N+L  G   + Q + A  L  EM   ++  D YT+N  +D L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G + EA      +       ++V+Y+ L+DG
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDG 325


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  297 bits (761), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 160/464 (34%), Positives = 258/464 (55%), Gaps = 46/464 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F  MLR  P P  V  F  L G + + +  D V+SL++++    +  DIY+ +I
Sbjct: 61  EDAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           LI CFC   ++       G+I +    P+ VTF +L+ GLC E R+ EA  LF  H++F 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF--HQMFE 177

Query: 207 -ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK------ 250
             C P+V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 251 ---------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                          PN V Y+ IID LCK+G    A+ LF +M+++ I PD+ TY S+I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC +  W++A++L  EM+++ + PDVVT++ +++   K GK  +A  L + M+ RG+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY+++IDG+C  +++D A  +F  M + GC  +++++NTLI+ YC  K +++ + L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM   G+     TYNTL  G + +  +  AL L  EM  + +  D  T +  +DGLC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 476 SGFVLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           +G + +ALE+F+ ++ SK +L           ++ +YN LI GL
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+  +    +LF  +   G+FPD++T++ +I  FC  GR S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    +P+ VT+ +LI     E +  EA  L+ +       P+  TY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA         C PN +T+NT+IDG C    +D   EL  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  TY ++I GF    D N A  L  EM+  G+ PD+VT   ++D LC NGK+  A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + ++M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+ TL  G  +  +V+  L+LF E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M R  + A+  TY   I G  K G +  AL++F+ +  S    + ++   ++ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---SHG 161
           P V ++N L     K   +     L+  +   G+ P+  T+S +I+ FCK  R+    H 
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F ++    + C +PN +TF +LI G C   RI +   L  +        D  TYNTLI+G
Sbjct: 383 FYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
               G    AL+L +EM +       +C P+ VT +T++DGLC  G +  A E+F  M+ 
Sbjct: 440 FYLVGDLNAALDLLQEMISSG-----LC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 282 E-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                        + PDV TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK  ++D+A+++ + M  +  +PN  T+ TLI+GYC   ++D   +LF  M   G +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + ++Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  GL+   +++RA+ +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 451 FDEMR 455
            ++++
Sbjct: 674 LEKLQ 678



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P VV F  +M  + +  + D    L + M  + +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y++  LI  +C   K+  A   F  +   G   DVV++NTL++  C    V EAL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     +P VVT+ TL  GL    ++  A+ L D M  + +     TY   +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 477 GFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
           G  + AL L R + +  + + N+V Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 164/420 (39%), Positives = 239/420 (56%), Gaps = 20/420 (4%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ +L MHP PP +  F  L   +AK KHY TVLSL  +++S G+ P++YT 
Sbjct: 25  TLDDALSSFNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 83

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILIN FC + RV   F VL +IL+    P+  TFT+LI+GLC E +I EA  LF K   
Sbjct: 84  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 143

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+V TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V Y +IID LCK
Sbjct: 144 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCK 197

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TYTS++   C   +W     L  +M++  + PDVV 
Sbjct: 198 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 257

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS ++D LCK GK+ +A  ++++MI RGV P+  TY TL+DG+CL  ++D A K+F  M 
Sbjct: 258 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 317

Query: 386 SNGCMHDVVSYNTLINWYCKNK----DVEEALSLYSEMLS--KGIKPTVVTYNTLFLGLF 439
             G   DV+SY TLIN   K+      ++E + L  E     KG    V+  + + L   
Sbjct: 318 RKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKL--- 374

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                E+   L +EM  + +  +   ++  +D LCK G V+EA ++   +     E N V
Sbjct: 375 ----FEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAV 430



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ V +  ++  + K         L  +M    + P+V T   +I  FC+ N    A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +++  G QPD  TF+ ++  LC  GK+ +A  L + MI  G  PN  TY TLI+G C 
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                 A +L  SME   C  DVV Y ++I+  CK++ V EA +L+S+M+ +GI P + T
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y +L   L  + + +    L ++M  + +  D   ++  +D LCK G V EA E+   + 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 491 DSKYELNIVSYNCLIDG 507
               E ++V+Y  L+DG
Sbjct: 283 QRGVEPDVVTYTTLMDG 299



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 6/298 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P +  +  L+  + +  H    L+L  +M +    FGV   PN  T N +I+  C    V
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS----FGV--PPNVYTLNILINSFCHLNRV 96

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A  +  K+      PD  T+T++IRG C      EA  LF +M+D+G QP+VVT+  +
Sbjct: 97  GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 156

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ LCK G    A RLL  M      P+   Y ++ID  C   ++  A  LF  M   G 
Sbjct: 157 INGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 216

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D+ +Y +L++  C   + +   +L ++M++  I P VV ++T+   L +  +V  A +
Sbjct: 217 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 276

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + D M +  V  D  TY   +DG C    + EA+++F  +    +  +++SY  LI+ 
Sbjct: 277 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINA 334



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 95/207 (45%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  ++A   F  ++     P +V F+ ++  + K         L   M   GV PN YT 
Sbjct: 24  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 83

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LI+ +C  +++  A  +   +   G   D  ++ TLI   C    + EAL L+ +M+ 
Sbjct: 84  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 143

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G +P VVTY TL  GL ++     A++L   M + +   D   Y + ID LCK   V E
Sbjct: 144 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 203

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  LF  +       +I +Y  L+  L
Sbjct: 204 AFNLFSQMVGQGISPDIFTYTSLVHAL 230


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 160/464 (34%), Positives = 258/464 (55%), Gaps = 46/464 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F  MLR  P P  V  F  L G + + +  D V+SL++++    +  DIY+ +I
Sbjct: 61  EDAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           LI CFC   ++       G+I +    P+ VTFT+L+ GLC E R+ EA   F  H++F 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF--HQMFE 177

Query: 207 -ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK------ 250
             C P+V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 251 ---------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                          PN V Y+ IID LCK+G    A+ LF +M+++ I PD+ TY S+I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC +  W++A++L  EM+++ + PDVVT++ +++   K GK  +A  L + M+ RG+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY+++IDG+C  +++D A  +F  M + GC  +++++NTLI+ YC  K +++ + L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM   G+     TYNTL  G + +  +  AL L  EM  + +  D  T +  +DGLC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 476 SGFVLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           +G + +ALE+F+ ++ SK +L           ++ +YN LI GL
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+  +    +LF  +   G+FPD++T++ +I  FC  GR S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    +P+ VT+ +LI     E +  EA  L+ +       P+  TY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA         C PN +T+NT+IDG C    +D   EL  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  TY ++I GF    D N A  L  EM+  G+ PD+VT   ++D LC NGK+  A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + ++M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+ TL  G  +  +V+  L+LF E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M R  + A+  TY   I G  K G +  AL++F+ +  S    + ++   ++ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---SHG 161
           P V ++N L     K   +     L+  +   G+ P+  T+S +I+ FCK  R+    H 
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F ++    + C +PN +TF +LI G C   RI +   L  +        D  TYNTLI+G
Sbjct: 383 FYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
               G    AL+L +EM +       +C P+ VT +T++DGLC  G +  A E+F  M+ 
Sbjct: 440 FYLVGDLNAALDLLQEMISSG-----LC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 282 E-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                        + PDV TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK  ++D+A+++ + M  +  +PN  T+ TLI+GYC   ++D   +LF  M   G +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + ++Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  GL+   +++RA+ +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 451 FDEMR 455
            ++++
Sbjct: 674 LEKLQ 678



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 1/213 (0%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P VV F  +M  + +  + D    L + M  + +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y++N LI  +C   K+  A   F  +   G   DVV++ TL++  C    V EAL  +
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     +P VVT+ TL  GL    ++  A+ L D M  + +     TY   +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 477 GFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
           G  + AL L R + +  + + N+V Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 160/464 (34%), Positives = 258/464 (55%), Gaps = 46/464 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F  MLR  P P  V  F  L G + + +  D V+SL++++    +  DIY+ +I
Sbjct: 61  EDAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           LI CFC   ++       G+I +    P+ VTF +L+ GLC E R+ EA  LF  H++F 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF--HQMFE 177

Query: 207 -ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK------ 250
             C P+V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237

Query: 251 ---------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                          PN V Y+ IID LCK+G    A+ LF +M+++ I PD+ TY S+I
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC +  W++A++L  EM+++ + PDVVT++ +++   K GK  +A  L + M+ RG+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY+++IDG+C  +++D A  +F  M + GC  +++++NTLI+ YC  K +++ + L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM   G+     TYNTL  G + +  +  AL L  EM  + +  D  T +  +DGLC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 476 SGFVLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           +G + +ALE+F+ ++ SK +L           ++ +YN LI GL
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+  +    +LF  +   G+FPD++T++ +I  FC  GR S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    +P+ VT+ +LI     E +  EA  L+ +       P+  TY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA         C PN +T+NT+IDG C    +D   EL  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  TY ++I GF    D N A  L  EM+  G+ PD+VT   ++D LC NGK+  A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + ++M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+ TL  G  +  +V+  L+LF E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M R  + A+  TY   I G  K G +  AL++F+ +  S    + ++   ++ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---SHG 161
           P V ++N L     K   +     L+  +   G+ P+  T+S +I+ FCK  R+    H 
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F ++    + C +PN +TF +LI G C   RI +   L  +        D  TYNTLI+G
Sbjct: 383 FYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
               G    AL+L +EM +       +C P+ VT +T++DGLC  G +  A E+F  M+ 
Sbjct: 440 FYLVGDLNAALDLLQEMISSG-----LC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 282 E-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                        + PDV TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK  ++D+A+++ + M  +  +PN  T+ TLI+GYC   ++D   +LF  M   G +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + ++Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  GL+   +++RA+ +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 451 FDEMR 455
            ++++
Sbjct: 674 LEKLQ 678



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 1/213 (0%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P VV F  +M  + +  + D    L + M  + +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y++  LI  +C   K+  A   F  +   G   DVV++NTL++  C    V EAL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     +P VVT+ TL  GL    ++  A+ L D M  + +     TY   +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 477 GFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
           G  + AL+L R + +  + + N+V Y+ +ID L
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSL 265


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  297 bits (760), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 158/420 (37%), Positives = 248/420 (59%), Gaps = 26/420 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  +LR +P+PP +  FN + G L K+KHY TVLSL +++   G+ P ++     
Sbjct: 59  DAFSLFSRLLRQNPTPPAIE-FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLF----- 112

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
                      H   ++G      + PN +TFT+LIKGLC + +I +A            
Sbjct: 113 --------HFQHPHQLMG------YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGF 158

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D   Y TLI+GLC+ G T  AL+L   + +GN     + +PN V Y+TIIDG+CK+  
Sbjct: 159 QLDQVGYGTLIHGLCKVGETRAALDLLRRV-DGN-----LVQPNVVMYSTIIDGMCKDKH 212

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A +L+ +M  + I+P+VVTY+++I GF       +A  LF +M+ + ++PDV TF++
Sbjct: 213 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNI 272

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK+GKM +   +  +M+ +G+ PN  TY +L+DGYCL  +++ A+ +  +M   G
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG 332

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ SYN LI+ +CK K V+EA++L+ EM  K I P VVTYN+L  GL ++ ++  AL
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KL DEM    V  D  TY++ +D LCK+  V +A+ L   ++D     N+ +Y  LIDGL
Sbjct: 393 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 189/352 (53%), Gaps = 6/352 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   + K+KH +    L+  + S G+ P++ T+S LI+ F  +G++     +
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P+  TF  L+ G C + ++ E   +F        +P+V TY +L++G C 
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++   M+    + GV   P+  +YN +IDG CK   VD+A  LF +M  ++I
Sbjct: 315 VKEVNKAKSILYTMS----QRGV--NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S+I G C     + A +L  EM D+GV PD++T+S I+D LCKN ++DKA  
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  +G+ PN YTY  LIDG C   +++ A  +F  +   G    V +Y  +I+ +C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
                +EAL+L S+M      P  VTY  +   LF+  + ++A KL + + R
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP + +++ +   L KN   D  ++L  +L   G+ P++YT++ILI+  CK GR+     
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L   +     T+T +I G C +    EA AL +K +  +C PD  TY  +I  L 
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523

Query: 224 RTGHTIVALNLFEEMANG 241
                  A  L E +  G
Sbjct: 524 DKDENDKAEKLREMITRG 541


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/409 (38%), Positives = 238/409 (58%), Gaps = 6/409 (1%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M+P PP    F  LFG + K KHY T +SL K   S G+ PD++T +I+INC C +    
Sbjct: 1   MNPLPPD-KDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTV 59

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
            GF VLG + +    P  VTF +LI GLCAE  +  AA           E + +T+ T+I
Sbjct: 60  FGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTII 119

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NGLC+ G T  A++  E++   N  F ++     + Y+TI+D LCK+G +  A   F  M
Sbjct: 120 NGLCKVGDTAGAISYLEKIEGRNRGFDLL-----IAYSTIMDSLCKDGMLCLALNFFSGM 174

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             + I PD+V Y S+I G C    WNEA  L   MM +G+ P+V TF+V++D  CK GK+
Sbjct: 175 TCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A  ++  M+  GV P+  TYN++I G+CL  +++ A K+F  M   G + +VV+Y++L
Sbjct: 235 SRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSL 294

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ +CK +++ +A+ +  EM++ G+   VVT++TL  G  +  + E A++LF  M  +H 
Sbjct: 295 IHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQ 354

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  T    +DGL K  F  EA+ LFR +     ELNIV+YN ++DG+
Sbjct: 355 LPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGM 403



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 201/405 (49%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L   L    +          L   G   + YTH  +IN  CK+G  +     
Sbjct: 75  PTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISY 134

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L +I  R+      + +++++  LC +  +  A   F+       +PD+  YN+LI+GLC
Sbjct: 135 LEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLC 194

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A  L   M       G++  PN  T+N ++D  CKEG + +AK +   M    
Sbjct: 195 SFGRWNEATTLLGNMMRK----GIM--PNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVG 248

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDVVTY SVI G C  +  N+A ++F  M+ +G+ P+VVT+S ++   CK   ++KA 
Sbjct: 249 VEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAI 308

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L+ M+  G+N +  T++TLI G+C   + + A +LF +M  +  + ++ +   +++  
Sbjct: 309 FVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGL 368

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K +   EA+SL+ +M    ++  +VTYN +  G+    +   A +LF  +    +  D 
Sbjct: 369 FKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDV 428

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y   I GLCK G + +A +L   + ++    N  +YN L+ GL
Sbjct: 429 VAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 179/357 (50%), Gaps = 6/357 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ +   L K+      L+ F  +   G+ PD+  ++ LI+  C  GR +    +LG +
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +R    PN  TF  L+   C E +I  A  +         EPDV TYN++I+G C     
Sbjct: 210 MRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ +FE M +     G++  PN VTY+++I G CK   ++KA  +  +M +  +N DV
Sbjct: 270 NDAVKVFELMIHK----GLL--PNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDV 323

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VT++++I GFC A     A  LF  M +    P++ T ++I+D L K     +A  L   
Sbjct: 324 VTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRK 383

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M    +  N  TYN ++DG C   K + AR+LF  + S G   DVV+Y T+I   CK   
Sbjct: 384 MEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGL 443

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           +++A  L  +M   G  P   TYN L  GL + + + R+ K    M+   ++AD  T
Sbjct: 444 LDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATT 500



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 174/347 (50%), Gaps = 7/347 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L     ++   +L   +   G+ P++ T ++L++ FCK G++S    +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++     P+ VT+ S+I G C  S++ +A  +F         P+V TY++LI+G C+
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCK 300

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +   A+ + +EM N NG        + VT++T+I G CK G  + A ELF  M + + 
Sbjct: 301 TRNINKAIFVLDEMVN-NG-----LNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQ 354

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++ T   ++ G       +EA  LF +M    ++ ++VT+++++D +C  GK + A  
Sbjct: 355 LPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARE 414

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   +  +G+  +   Y T+I G C    +D A  L + ME NGC  +  +YN L+    
Sbjct: 415 LFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLL 474

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           +  D+  +      M  KG+     T   L +  F  ++   AL++F
Sbjct: 475 QRYDISRSTKYLMLMKGKGLSADATT-TELLISYFSANKENSALQVF 520


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/464 (34%), Positives = 258/464 (55%), Gaps = 46/464 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F  MLR  P P  V  F  L G + + +  D V+SL++++    +  DIY+ +I
Sbjct: 61  EDAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           LI CFC   ++       G++ +    P+ VTF +L+ GLC E R+ EA  LF  H++F 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF--HQMFE 177

Query: 207 -ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK------ 250
             C P+V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK      
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 251 ---------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                          PN V Y+ IID LCK+G    A+ LF +M+++ I PD+ TY S+I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC +  W++A++L  EM+++ + PDVVT++ +++   K GK  +A  L + M+ RG+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY+++IDG+C  +++D A  +F  M + GC  +++++NTLI+ YC  K +++ + L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM   G+     TYNTL  G + +  +  AL L  EM  + +  D  T +  +DGLC 
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 476 SGFVLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           +G + +ALE+F+ ++ SK +L           ++ +YN LI GL
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+  +    +LF  +   G+FPD++T++ +I  FC  GR S    +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    +P+ VT+ +LI     E +  EA  L+ +       P+  TY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA         C PN +T+NT+IDG C    +D   EL  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  TY ++I GF    D N A  L  EM+  G+ PD+VT   ++D LC NGK+  A  
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + ++M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+ TL  G  +  +V+  L+LF E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M R  + A+  TY   I G  K G +  AL++F+ +  S    + ++   ++ GL
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 191/365 (52%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---SHG 161
           P V ++N L     K   +     L+  +   G+ P+  T+S +I+ FCK  R+    H 
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F ++    + C +PN +TF +LI G C   RI +   L  +        D  TYNTLI+G
Sbjct: 383 FYLMAT--KGC-SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
               G    AL+L +EM +       +C P+ VT +T++DGLC  G +  A E+F  M+ 
Sbjct: 440 FYLVGDLNAALDLLQEMISSG-----LC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 282 E-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                        + PDV TY  +I G      + EA+ L+ EM  +G+ PD +T+S ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK  ++D+A+++ + M  +  +PN  T+ TLI+GYC   ++D   +LF  M   G +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + ++Y TLI  + K  ++  AL ++ EM+S G+ P  +T   +  GL+   +++RA+ +
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 451 FDEMR 455
            ++++
Sbjct: 674 LEKLQ 678



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 1/213 (0%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P VV F  +M  + +  + D    L + M  + +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y++  LI  +C   K+  A   F  +   G   DVV++NTL++  C    V EAL+L+
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     +P VVT+ TL  GL    ++  A+ L D M  + +     TY   +DG+CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 477 GFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
           G  + AL L R + +  + + N+V Y+ +ID L
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL 265


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 162/461 (35%), Positives = 254/461 (55%), Gaps = 46/461 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  M+R  P P  V  FN L G + + +  D V+SL++++    +  D+Y+ +IL
Sbjct: 60  DAIDLFSDMVRSRPLPS-VIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNIL 118

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I CFC   ++       G+I +  F P+ VTF++L+ GLC E R+ EA  LF  H++  C
Sbjct: 119 IKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF--HQM--C 174

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVVC-------------- 249
            P+V T+ TL+NGLCR G  + A+ L + M     +     +G +               
Sbjct: 175 RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALN 234

Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KPN V Y+ IIDGL K+G    A  L+ +M+++ I PD+ TY  +I GF
Sbjct: 235 LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGF 294

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C +  W+EA+RL  EM+++ + P+VVT+S +++   K  K  +A  L + M+ RG+ PNT
Sbjct: 295 CSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN++IDG+C  +++D A  +F  M + GC  DV ++NTLI+ YC  K +++   L  E
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M   G+     TYNTL  G   +  +  AL L  +M  + V  D  T N  +DGLC +G 
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474

Query: 479 VLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
           + +ALE+F+A++ SK +L           ++ +YN LI GL
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL 515



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 208/414 (50%), Gaps = 17/414 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M  M    P V  ++ +   L K+  +    +L+  +   G+FPD++T++ +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + FC  GR S    +L  +L     PN VT+++LI     E +  EA  L+ +       
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGII 351

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN++I+G C+      A ++F  MA         C P+  T+NT+IDG C    +
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG------CSPDVFTFNTLIDGYCGAKRI 405

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D   EL  +M +  +  D  TY ++I GFC   D N A  L  +M+  GV PD+VT + +
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465

Query: 330 MDELCKNGKMDKASRLLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +D LC NGK+  A  + + M            + GV P+  TYN LI G     K   A 
Sbjct: 466 LDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L+  M   G + + ++Y+++IN  CK   ++EA  ++  M SK   P VVT+NTL  G 
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +  +V+  L+LF EM R  + AD  TY   I G  K G +  AL++F+ +  S
Sbjct: 586 CKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISS 639



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 221/461 (47%), Gaps = 46/461 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F  M R     P V +F  L   L +       ++L  R+   GL P+  T+  
Sbjct: 164 SEALDLFHQMCR-----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218

Query: 148 LINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++  CK+G       +L ++   S   PN V ++++I GL  + R  +A  L+T+ +  
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---------------- 250
              PD+FTYN +I+G C +G    A  L +EM        VV                  
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338

Query: 251 -------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                        PNT+TYN++IDG CK+  +D A+ +F  M  +  +PDV T+ ++I G
Sbjct: 339 EELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDG 398

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C A   ++   L  EM + G+  D  T++ ++   C  G ++ A  L + MI  GV P+
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMES-----------NGCMHDVVSYNTLINWYCKN 406
             T NTL+DG C   K+  A ++F +M+            NG   DV +YN LI+     
Sbjct: 459 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINE 518

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
               EA  LY EM  +GI P  +TY+++  GL +  +++ A ++FD M     + D  T+
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  + G CK+G V + LELF  +       + ++Y  LI G
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---SHG 161
           P V +++ L     K + +     L+  +   G+ P+  T++ +I+ FCK  R+    H 
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHM 376

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F V+    + C +P+  TF +LI G C   RI +   L  +        D  TYNTLI+G
Sbjct: 377 FYVMAT--KGC-SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C  G    AL+L ++M +       VC P+ VT NT++DGLC  G +  A E+F  M+ 
Sbjct: 434 FCLVGDLNAALDLSQQMISSG-----VC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 487

Query: 282 E-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                        + PDV TY  +I G      + EA+ L+ EM  +G+ P+ +T+S ++
Sbjct: 488 SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           + LCK  ++D+A+++ + M  +  +P+  T+NTL+ GYC   ++D   +LF  M   G +
Sbjct: 548 NGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIV 607

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D ++Y TLI+ + K  ++  AL ++ EM+S G+ P  +T  ++   L+   +++RA+ +
Sbjct: 608 ADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAM 667

Query: 451 FDEMR 455
            ++++
Sbjct: 668 LEDLQ 672



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 5/213 (2%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P V+ F+ +M  + +  + D    L + M  + +  
Sbjct: 51  GFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPC 110

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y++N LI  +C   K+  A   F  +   G   DVV+++TL++  C    V EAL L+
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLF 170

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     +P VVT+ TL  GL    +V  A+ L D M  + +  +  TY   +DG+CK 
Sbjct: 171 HQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 477 GFVLEALELFRAIRD-SKYELNIVSYNCLIDGL 508
           G  + AL L R + + S  + N+V Y+ +IDGL
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL 259


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/430 (40%), Positives = 243/430 (56%), Gaps = 53/430 (12%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           I+  +A   FD M+R       + SFN L   LAK +HY  V SL+K+++ AGL+PD+ T
Sbjct: 75  ISVTQAHQFFDLMMR------SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLT 128

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +ILINC C + R++                         +GL A + IM    +     
Sbjct: 129 LNILINCLCNVNRIN-------------------------EGLAAMAGIMRRGYI----- 158

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                PDV T+ TLI GLC     I A  LF  M        + C PN VTY T+I GLC
Sbjct: 159 -----PDVVTFTTLIKGLCVEHRIIEATKLFMRMQK------LGCTPNVVTYGTLIKGLC 207

Query: 265 KEGFVDKAKELFLKMKDE------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
             G ++ A +   +M ++      N  P+V++Y+ +I G C   +W EA  LF EM+DQG
Sbjct: 208 ALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQG 267

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           VQP+VVTFSV++D LCK G++ KA +LLE+MI  G+ PN +TY +LI G+CL   ++ A+
Sbjct: 268 VQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAK 327

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LFVSM S G   DV+SYN LIN YCK   VEEA+ L++EML  G+ P V T   L   L
Sbjct: 328 ELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKAL 387

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           F   +V+ A +LF  ++   +  D      F+DGLCK+G++ EA++LF  +     +L+I
Sbjct: 388 FLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDI 447

Query: 499 VSYNCLIDGL 508
            ++ CLIDGL
Sbjct: 448 ETFGCLIDGL 457



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 176/348 (50%), Gaps = 6/348 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ ++SI+I+  CK+G       +   ++     PN VTF+ LI  LC E ++++A  L
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
                     P++FTY +LI G C  G    A  LF  M +   E      P+ ++YN +
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYE------PDVISYNML 348

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+G CK   V++A +LF +M    + PDV T   +++    A   ++AK LF  +    +
Sbjct: 349 INGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAM 408

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
             D+    + +D LCKNG + +A +L   +    +  +  T+  LIDG C   K++ A +
Sbjct: 409 PKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWE 468

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF  +   G   D ++Y+++I+ +CK   V++A  L+ +M   G  P ++TY+ L  G +
Sbjct: 469 LFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFY 528

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           E +++E+ ++L   M    V  D   Y    D +CK     E L+L +
Sbjct: 529 ESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 9/163 (5%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           I    L KN +    + LF  L S  +  DI T   LI+  CK G++   + +  ++   
Sbjct: 417 IFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEE 476

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              P+A+ ++S+I G C + ++ +A  LF K     C PD+ TY+ L+ G   +      
Sbjct: 477 GIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKV 536

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           + L   M   +        P+   Y  + D +CK+   +K KE
Sbjct: 537 VQLLHRMIEKD------VWPDDGIYAIVEDMVCKD---EKYKE 570


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 238/404 (58%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+  FN + G LAK K Y T +SL K++   G+  +  T +ILINCFC +G+++  F V
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG+IL+  + P+ +T  +L+KGLC +  + ++     K      + D  +Y TL+NGLC+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A+ L   + + +       +PN V YNTIIDGLCK+  V++A +L+ +M    I
Sbjct: 128 IGETRCAVKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TYT++I GFC       A  L  EM+ + + P V  ++++++ LCK G + +A  
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL +M   G+ P   TY+TL+DGYCL  ++ +A+++F +M   G   +V SYN +IN  C
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K V+EA++L  EML K + P  VTYN+L  GL +  ++  AL L +EM      AD  
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 361

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + +D LCK+  + +A  LF  +++   +  + +Y  LIDGL
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N L   L         L    ++ + G   D  ++  L+N  CK+G       +
Sbjct: 78  PDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKL 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      PN V + ++I GLC +  + EA  L+++       PD  TY TLI G C 
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCL 197

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A +L +EM   N        P    YN +I+ LCKEG V +AK L   M  E I
Sbjct: 198 LGQLMGAFSLLDEMILKN------INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P VVTY++++ G+C   +   AK++F  M+  GV P+V +++++++ LCK  ++D+A  
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+ + + P+T TYN+LIDG C + +I  A  L   M   G   DVV+Y +L++  C
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN+++++A +L+ +M  +GI+PT+ TY  L  GL +  +++ A +LF  +       D +
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I GLCK G   EAL +   + D+    N V++  +I  L
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 475



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+    + P V  +N +   L K+K  +    L+  +++ G+FPD  T++ LI  FC +G
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLG 199

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++   F +L  ++     P    +  LI  LC E  + EA  L         +P V TY+
Sbjct: 200 QLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYS 259

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TL++G C  G    A  +F  M     + GV   PN  +YN +I+GLCK   VD+A  L 
Sbjct: 260 TLMDGYCLVGEVQNAKQIFHAMV----QMGV--NPNVYSYNIMINGLCKCKRVDEAMNLL 313

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M  +N+ PD VTY S+I G C +     A  L  EM  +G   DVVT++ ++D LCKN
Sbjct: 314 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
             +DKA+ L   M  RG+ P  YTY  LIDG C   ++ +A++LF  +   GC  DV +Y
Sbjct: 374 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 433

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
             +I+  CK    +EAL++ S+M   G  P  VT+  +   LFE  + ++A KL  EM
Sbjct: 434 TVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/467 (34%), Positives = 263/467 (56%), Gaps = 45/467 (9%)

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +G  DI L   ++A+ +F  M +  P P  +  F+ L   +AK   +D V+S  +++   
Sbjct: 52  TGLSDIEL---DDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEIL 107

Query: 137 GLFPDIYTHSILINCFC----------------KMG-------------------RVSHG 161
           G+  ++YT++ILINCFC                K+G                   R+S  
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             ++ +++   + P+ VTFT+LI GL   ++  EA AL  +     C+PD+ TY  ++NG
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC+ G T +ALNL  +M     E       N V Y+T+ID LCK    D A  LF +M++
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + + P+V+TY+S+I   C    W++A RL  +M+++ + P++VTFS ++D   K GK+ K
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +L E MI R ++PN +TY++LI+G+C+ D++  A+++   M    C+ +VV+YNTLIN
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +CK K V++ + L+ EM  +G+    VTY TL  G F+    + A  +F +M    V  
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TYN  +DGLCK+G + +A+ +F  ++ S  E +I +YN +I+G+
Sbjct: 462 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 157/277 (56%), Gaps = 6/277 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  ++ +   L K +H D  L+LF  + + G+ P++ T+S LI+C C  GR S    +L 
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     PN VTF++LI     + ++++A  L+ +    + +P++FTY++LING C   
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  + E M   +      C PN VTYNT+I+G CK   VDK  ELF +M    +  
Sbjct: 373 RLGEAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + VTYT++I GF  A D + A+ +F +M+  GV P+++T+++++D LCKNGK+ KA  + 
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           E +    + P+ YTYN +I+G C   K       FV+
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 108/218 (49%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  V+R      + ++A  LF  M      P ++ FS ++  + K  K D      E M 
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G++ N YTYN LI+ +C   ++  A  L   M   G   D+V+ N+L+N +C    + 
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A++L  +M+  G KP  VT+ TL  GLF  ++   A+ L D M +     D  TY   +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +GLCK G    AL L   +  +K E N+V Y+ +ID L
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + + M+R     P V ++N L     K K  D  + LF+ ++  GL  +  T++ L
Sbjct: 376 EAKQMLELMIR-KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ F +     +  +V  +++     PN +T+  L+ GLC   ++ +A  +F   +    
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 209 EPDVFTYNTLINGLCRTG 226
           EPD++TYN +I G+C+ G
Sbjct: 495 EPDIYTYNIMIEGMCKAG 512


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 159/422 (37%), Positives = 245/422 (58%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M+RM P P  V  F+ LF  +   KHY  V+SLF+ +   G+       +I
Sbjct: 44  DDAVSLFHRMVRMKPLPS-VIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVF 206
           + N +C   R+   F VL   L++    N VTF +L+ GL AE+++ +A  LF K  R  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            CEP+   Y T++NGL + GHT   L+L   M  GN       KP+  TY+ +ID LCK+
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGN------TKPDVRTYSIVIDALCKD 216

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +D A  L  +MK +NI P++ TY S+I G C    W + K L  EM++  + P+V TF
Sbjct: 217 INLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTF 276

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++D LCK GK++ A  ++  MI +GV P+  TY+ ++DGYCL  ++D AR++F  +  
Sbjct: 277 SILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRD 336

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   ++ SY+ LIN YCK K++ +A+ L+ E+  KG+KP  VTY+T+  GL E+ ++  
Sbjct: 337 KGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGD 396

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A K+FDEM R     D   ++  + G  K G V EA+ LF  +  ++ + NI  Y  +I+
Sbjct: 397 AKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVIN 456

Query: 507 GL 508
           GL
Sbjct: 457 GL 458



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 214/406 (52%), Gaps = 9/406 (2%)

Query: 104 PPPVSSFNILFGCL-AKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHG 161
           P  V +FN L G L A+NK  D V+ LFK+L    +  P+   +  ++N   K G     
Sbjct: 129 PFNVVTFNTLLGGLFAENKVTDAVV-LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKT 187

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +L  + +    P+  T++ +I  LC +  +  A  L  + +     P++FTYN+LI+G
Sbjct: 188 LSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG 247

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC+ G       L  EM N N        PN  T++ +IDGLCKEG V+ A E+   M +
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLN------INPNVHTFSILIDGLCKEGKVEDADEVMRHMIE 301

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + + PD++TY++++ G+C     + A+R+F  + D+G++P++ ++S++++  CK   + K
Sbjct: 302 KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAK 361

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +L   +  +G+ P+T TY+T++ G     +I  A+K+F  M   G   D+  ++TL+ 
Sbjct: 362 AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLF 421

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            Y K   VEEA+ L+S++        +  Y  +  GL +  +V  A  +F+++    +  
Sbjct: 422 GYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TYN  I G C+ G   E   + R + D+    N ++YN ++ G
Sbjct: 482 DVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQG 527



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 211/420 (50%), Gaps = 6/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  ++R     P    +  +   L+K  H +  LSL + +      PD+ T+SI+
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIV 209

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK   +     +L  + +    PN  T+ SLI GLC   +  +   L ++      
Sbjct: 210 IDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNI 269

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V T++ LI+GLC+ G    A  +   M     E GV  +P+ +TY+ I+DG C  G 
Sbjct: 270 NPNVHTFSILIDGLCKEGKVEDADEVMRHMI----EKGV--EPDIITYSAIMDGYCLRGQ 323

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD+A+ +F  ++D+ I P++ +Y+ +I G+C   +  +A +LF E+  +G++PD VT+S 
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  L + G++  A ++ + M+  G  P+   ++TL+ GY     ++ A  LF  +E N 
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++  Y  +IN  CKN  V EA +++ ++ S G+ P V TYN +  G       +   
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVK 503

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +M  N   A+  TYN  + G  +S  + E +   + +    +  +  +   LI+ L
Sbjct: 504 GILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V +++I+   L K+ + D  ++L   +    + P+I+T++ LI+  CK+G+     
Sbjct: 199 TKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVK 258

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     PN  TF+ LI GLC E ++ +A  +         EPD+ TY+ +++G 
Sbjct: 259 TLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGY 318

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C  G    A  +F  + +         KPN  +Y+ +I+G CK+  + KA +LF ++  +
Sbjct: 319 CLRGQVDRARRVFNVLRDKG------IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK 372

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD VTY++++ G        +AK++F EM+  G  PD+   S ++    K G +++A
Sbjct: 373 GLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEA 432

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L   +     + N   Y  +I+G C  D++  A  +F  + S G + DV +YN +I  
Sbjct: 433 MLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITG 492

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C+    +E   +  +M   G     +TYN +  G F  +++   +    EM     + D
Sbjct: 493 FCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFD 552

Query: 463 TYTYNNFIDGLCKSGFVLEAL 483
             T    I+ L ++  +++ +
Sbjct: 553 ATTTGVLINVLKENPSIVDMI 573



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 45/372 (12%)

Query: 81  DINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           DINL   + A+ + + M +    PP + ++N L   L K   ++ V +L   + +  + P
Sbjct: 216 DINL---DAAINLLNEM-KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINP 271

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           +++T SILI+  CK G+V     V+  ++     P+ +T+++++ G C   ++  A  +F
Sbjct: 272 NVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
              R    +P++F+Y+ LING C+  +   A+ LF E++          KP+TVTY+TI+
Sbjct: 332 NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKG------LKPDTVTYSTIL 385

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVT------------------------------ 290
            GL + G +  AK++F +M      PD+                                
Sbjct: 386 HGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445

Query: 291 -----YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
                YT VI G C  +   EA  +F ++   G+ PDV T++V++   C+ G  D+   +
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGI 505

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L  M   G   N  TYN ++ G+  ++KI         M   G   D  +   LIN   +
Sbjct: 506 LRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKE 565

Query: 406 NKDVEEALSLYS 417
           N  + + +  +S
Sbjct: 566 NPSIVDMIPDHS 577



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 36/275 (13%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A  LF +M      P V+ ++ + +       ++    LF EM   G+       ++
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS----- 383
           + +  C   ++D A  +L + +  G+  N  T+NTL+ G    +K+  A  LF       
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 384 -------------------------------MESNGCMHDVVSYNTLINWYCKNKDVEEA 412
                                          ME      DV +Y+ +I+  CK+ +++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           ++L +EM  K I P + TYN+L  GL ++ Q E+   L  EM   ++  + +T++  IDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LCK G V +A E+ R + +   E +I++Y+ ++DG
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDG 317


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 247/422 (58%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N  +  F+++L +H +P PP   FN +   L K KH+ T LSL +++   G+  D +T +
Sbjct: 42  NNLISSFNHLL-LHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFN 100

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILINCF ++G  S  F +  +IL+  + P A+TF +LIKGLC +  I +A     K    
Sbjct: 101 ILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQ 160

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               D  +Y TLINGLC+ G    AL L + +       G + +PN V YN IID +CK 
Sbjct: 161 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKA 214

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V+ A +L+ +M  + I PDV TY ++I GF   +  N A  LF +M  + + P+V TF
Sbjct: 215 KLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTF 274

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D  CK GK++ A  +L +M+   + P+  TYN+L+DGYC  +K++ A+ +F SM S
Sbjct: 275 NILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + +V  Y T++N +CK K V+EA++L+ EM  + I P VVTY++L  GL ++ ++  
Sbjct: 335 GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFY 394

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           ALKL DEM       +  TY++ +D LCK+  V +A+ L   ++D     ++ +Y  LI 
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454

Query: 507 GL 508
           GL
Sbjct: 455 GL 456



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 209/403 (51%), Gaps = 13/403 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L   L    H    L    ++ + G   D  ++  LIN  CK+GR++    +
Sbjct: 129 PTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQL 188

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+      PNAV +  +I  +C    + +A  L+++       PDVFTYN LI+G   
Sbjct: 189 LKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSA 248

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A++LF +M   N        PN  T+N ++DG CKEG V+ AK +   M  ++I
Sbjct: 249 VSKLNYAIDLFNKMKKEN------INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S++ G+C  N  N+AK +F  M   GV  +V  ++ +++  CK   +D+A  
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M  R + PN  TY++LIDG C   +I +A KL   M   G   ++V+Y+++++  C
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  V++A++L + +  +GI+P + TY  L  GL +  ++E A  +F+++       D Y
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDS-------KYELNIVS 500
            Y   I G C  GF  +AL L   + D+        YEL I+S
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILS 525



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N++   + K K  +    L+ ++ +  + PD++T++ LI+ F  + ++++   +
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++ +    PN  TF  L+ G C E ++ +A  +         +PDV TYN+L++G C 
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F+ MA+G    GV+   N   Y T+++G CK   VD+A  LF +M+   I
Sbjct: 319 INKVNKAKDIFDSMASG----GVIA--NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY+S+I G C       A +L  EM D+G  P++VT+S I+D LCKN  +DKA  
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  +G+ P+ YTY  LI G C + +++ A+ +F  +   G   DV +Y  +I  +C
Sbjct: 433 LLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFC 492

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
                ++AL+L S+M   G  P   TY  + L LFE  + + A KL  EM
Sbjct: 493 DKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 177/323 (54%), Gaps = 12/323 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L    +     +  + LF ++    + P++YT +IL++ FCK G+V+   VV
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    P+ VT+ SL+ G C+ +++ +A  +F          +V  Y T++NG C+
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                 A+NLFEEM          C+   PN VTY+++IDGLCK G +  A +L  +M D
Sbjct: 354 IKMVDEAINLFEEMR---------CRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P++VTY+S++   C  +  ++A  L   + DQG++PD+ T+++++  LC++G+++ 
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  + E ++ +G N + Y Y  +I G+C     D A  L   ME NGC+ +  +Y  +I 
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVIL 524

Query: 402 WYCKNKDVEEALSLYSEMLSKGI 424
              +  + + A  L  EM+ +G+
Sbjct: 525 SLFEKDENDTAEKLLREMIVRGL 547


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 156/447 (34%), Positives = 256/447 (57%), Gaps = 42/447 (9%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M++  P  P +  FN L   +AK K +D V+SL +++   G+  ++YT++ILINCFC+  
Sbjct: 1   MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-------------- 202
           ++S    +LG++++  + P+ VT +SL+ G C   RI +A AL  +              
Sbjct: 60  QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119

Query: 203 ---HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
              H +F                   C+P++ TY  ++NGLC+ G   +A NL  +M   
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             E       + V +NTIID LCK   VD A  LF +M+ + I P+VVTY+S+I   C  
Sbjct: 180 KIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             W++A +L  +M+++ + P++VTF+ ++D   K GK  +A +L + MI R ++P+ +TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N+LI+G+C+ D++D A+++F  M S  C  D+ +YNTLI  +CK+K VE+   L+ EM  
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G+    VTY TL  GLF     + A K+F +M  + V  D  TY+  +DGLC +G + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           ALE+F  ++ S+ +L+I  Y  +I+G+
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGM 440



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 16/389 (4%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +GDI+L         F+ + +M  +     V  FN +   L K +H D  L+LFK + + 
Sbjct: 163 RGDIDLA--------FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++ T+S LI+C C  GR S    +L  ++     PN VTF +LI     E + +EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L       + +PD+FTYN+LING C       A  +FE M + +      C P+  TY
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------CFPDLDTY 328

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I G CK   V+   ELF +M    +  D VTYT++I+G  +  D + A+++F +M+ 
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV PD++T+S+++D LC NGK++KA  + + M    +  + Y Y T+I+G C   K+D 
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
              LF S+   G   +VV+YNT+I+  C  + ++EA +L  +M   G  P   TYNTL  
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYT 465
                     + +L  EMR      D  T
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDAST 537



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 206/407 (50%), Gaps = 7/407 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M++     P + ++ ++   L K    D   +L  ++ +A +  D+   + 
Sbjct: 132 SEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   V     +   +      PN VT++SLI  LC+  R  +A+ L +      
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ T+N LI+   + G  + A  L ++M   +        P+  TYN++I+G C   
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS------IDPDIFTYNSLINGFCMHD 304

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +DKAK++F  M  ++  PD+ TY ++I+GFC +    +   LF EM  +G+  D VT++
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  L  +G  D A ++ + M+  GV P+  TY+ L+DG C   K++ A ++F  M+ +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+  Y T+I   CK   V++   L+  +  KG+KP VVTYNT+  GL     ++ A
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             L  +M+ +    D+ TYN  I    + G    + EL R +R  ++
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 31/283 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D M++     P + ++N L      +   D    +F+ + S   FPD+ T++ L
Sbjct: 273 EAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FCK  RV  G  +   +       + VT+T+LI+GL  +     A  +F +      
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK--------- 250
            PD+ TY+ L++GLC  G    AL +F+ M     +  +         +CK         
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTYNT+I GLC +  + +A  L  KMK++   PD  TY ++IR   
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              D   +  L  EM       D  T  ++ + L  +G++DK+
Sbjct: 512 RDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 553


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 153/421 (36%), Positives = 244/421 (57%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F++M  +HP+P     FN +   L   K Y T +SL+K++  + + PD +T +I
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFH-FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +INCFC  G+V   F  + +IL+  + PN +T  +L+KGLC E ++ EA     K     
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
                 +Y  LING+C+ G T  A+ L   +   +       +PN V Y+ IID LCK+ 
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWS------IRPNVVIYSMIIDRLCKDT 212

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A +L+ +M  + I+PDVVTY+ ++ GFC     N A  L  EM+ + + PD+ T++
Sbjct: 213 LVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYT 272

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK GK+ +A  +L +M+   VN +   Y+TL+DGYCL +++++A+++F +M   
Sbjct: 273 ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM 332

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV  Y+ +IN  CK K V+EAL+L+ E+  K + P  VTY +L   L +  ++   
Sbjct: 333 GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYV 392

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LFDEM       D  TYNN ID LCK+G +  A+ LF  ++D     N+ ++  L+DG
Sbjct: 393 WDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452

Query: 508 L 508
           L
Sbjct: 453 L 453



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 211/401 (52%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N L   L         L    ++ + G      ++ ILIN  CK+G       +
Sbjct: 126 PNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRL 185

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L RI R    PN V ++ +I  LC ++ + EA  L+T+       PDV TY+ L++G C 
Sbjct: 186 LRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCI 245

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++L  EM   N        P+  TY  ++D LCKEG V +A+ +   M    +
Sbjct: 246 VGQLNRAIDLLNEMVLEN------INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACV 299

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           N DVV Y++++ G+C  N+ N AKR+F  M   GV PDV  +S++++ LCK  ++D+A  
Sbjct: 300 NLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E +  + + P+T TY +LID  C + +I +   LF  M   G   DV++YN LI+  C
Sbjct: 360 LFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALC 419

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  ++ A++L+++M  + I+P V T+  L  GL ++ +++ AL+ F ++       +  
Sbjct: 420 KNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVR 479

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY   I+GLCK G + EAL L   + D+    + V++  +I
Sbjct: 480 TYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++++   L K+   D    L+  +   G+ PD+ T+SIL++ FC +G+++    +
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+  T+T L+  LC E ++ EA  +           DV  Y+TL++G C 
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +F  M     + GV   P+   Y+ +I+GLCK   VD+A  LF ++  +N+
Sbjct: 316 VNEVNNAKRVFYTMT----QMGVT--PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNM 369

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTYTS+I   C +   +    LF EM+D+G  PDV+T++ ++D LCKNG +D+A  
Sbjct: 370 VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIA 429

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  + + PN YT+  L+DG C   ++ +A + F  + + G   +V +Y  +IN  C
Sbjct: 430 LFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLC 489

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K   ++EAL+L S M   G     VT+  +    F+  + ++A KL  EM
Sbjct: 490 KEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 170/320 (53%), Gaps = 6/320 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++IL          +  + L   +    + PDIYT++IL++  CK G+V     V
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++++C   + V +++L+ G C  + +  A  +F         PDV  Y+ +INGLC+
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 ALNLFEE+   N        P+TVTY ++ID LCK G +    +LF +M D   
Sbjct: 351 IKRVDEALNLFEEIHQKN------MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQ 404

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TY ++I   C     + A  LF +M DQ ++P+V TF++++D LCK G++  A  
Sbjct: 405 PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALE 464

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + ++ +G   N  TY  +I+G C    +D A  L   ME NGC+ D V++  +I  + 
Sbjct: 465 FFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFF 524

Query: 405 KNKDVEEALSLYSEMLSKGI 424
              + ++A  L  EM+++G+
Sbjct: 525 DKDENDKAEKLVREMIARGL 544



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 146/288 (50%), Gaps = 2/288 (0%)

Query: 222 LCRTGHTIVAL--NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           LC   H++  L  N  + ++  N  F V   P+T  +N I+  L        A  L+ +M
Sbjct: 25  LCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQM 84

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           +   + PD  T   +I  FC+      A     +++  G QP+ +T + +M  LC  GK+
Sbjct: 85  ELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKV 144

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A R  + ++ +G   +  +Y  LI+G C   +   A +L   +E      +VV Y+ +
Sbjct: 145 KEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMI 204

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  CK+  V+EA  LY+EM+ KGI P VVTY+ L  G   + Q+ RA+ L +EM   ++
Sbjct: 205 IDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENI 264

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             D YTY   +D LCK G V EA  +   +  +   L++V Y+ L+DG
Sbjct: 265 NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 1/146 (0%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML     PP V ++N L   L KN H D  ++LF ++    + P++YT +IL++  
Sbjct: 395 LFDEMLD-RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK+GR+ +       +L   +  N  T+T +I GLC E  + EA AL ++     C  D 
Sbjct: 454 CKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDA 513

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM 238
            T+  +I           A  L  EM
Sbjct: 514 VTFEIMIRAFFDKDENDKAEKLVREM 539


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 166/421 (39%), Positives = 243/421 (57%), Gaps = 15/421 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F  ML M  +PP +  FN +    AK KHY TV+SL +RL    + PD +T +I
Sbjct: 45  DDALFQFHRMLCMRHTPP-IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +G+++  F VL +IL+  + P+ VT T+LIKGLC + ++ +A     K     
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  +Y TLING+C+ G T  A+ L   +       G + +PN V YNTIID LCK  
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRID------GRLTEPNVVMYNTIIDCLCKRK 217

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ +VVTY+++I GFC      EA     EM+ + + PDV  ++
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D L K GK+ +A  +L +++   + PN  TYNTLIDGY        A+ +F ++   
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLM 329

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV SYN +IN  CK K VEEAL+LY EM  K + P  VTYN+L  GL +  ++  A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L DEM      A+  TYN+ I+GLCK+G + +A+ L   ++D   + ++ + N L+ G
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449

Query: 508 L 508
           L
Sbjct: 450 L 450



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 160/286 (55%), Gaps = 15/286 (5%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+Y ++ L++   K G+V     VL  I+++C  PN +T+ +LI G         A  +
Sbjct: 271 PDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHV 322

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F    +    PDV++YN +IN LC+      ALNL++EM   N        PNTVTYN++
Sbjct: 323 FNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKN------MVPNTVTYNSL 376

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLCK G +  A +L  +M D   + +V+TY S+I G C     ++A  L  +M DQG+
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436

Query: 320 QPDVVTFSVIMDEL-CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           QPD+ T ++++  L CK  ++  A  L + ++ +G +PN YTYN +I G+C    +D A 
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
            L   ME +GC  + +++  +I    +  + ++A  L  EM+++G+
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 185/353 (52%), Gaps = 15/353 (4%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P V  +N +  CL K K      +LF  ++  G+  ++ T+S +I+ FC +G+++   
Sbjct: 199 TEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL 258

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             L  ++     P+   + +L+  L  E ++ EA  +         +P+V TYNTLI+G 
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            +             + N  G  GV   P+  +YN +I+ LCK   V++A  L+ +M  +
Sbjct: 319 AK------------HVFNAVGLMGVT--PDVWSYNIMINRLCKIKRVEEALNLYKEMHQK 364

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ P+ VTY S+I G C +   + A  L  EM D+G   +V+T++ +++ LCKNG++DKA
Sbjct: 365 NMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKA 424

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGY-CLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
             L+  M  +G+ P+ YT N L+ G  C   ++ +A+ LF  +   G   +V +YN +I 
Sbjct: 425 IALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIY 484

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +CK   ++EA +L S+M   G  P  +T+  +   L E  + ++A KL  EM
Sbjct: 485 GHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 184/379 (48%), Gaps = 15/379 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   + K       + L +R++     P++  ++ +I+C CK   VS    +   +
Sbjct: 170 SYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEM 229

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                + N VT++++I G C   ++ EA     +  + A  PDV+ YNTL++ L + G  
Sbjct: 230 SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKV 289

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A N+   +           KPN +TYNT+IDG         AK +F  +    + PDV
Sbjct: 290 KEAKNVLAVIVK------TCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDV 335

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            +Y  +I   C      EA  L+ EM  + + P+ VT++ ++D LCK+G++  A  L++ 
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN-WYCKNK 407
           M  RG + N  TYN+LI+G C   ++D A  L   M+  G   D+ + N L++   CK K
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            ++ A  L+ ++L KG  P V TYN +  G  +   ++ A  L  +M  +  + +  T+ 
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFK 515

Query: 468 NFIDGLCKSGFVLEALELF 486
             I  L + G   +A +L 
Sbjct: 516 IIICALLEKGETDKAEKLL 534



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 129/251 (51%), Gaps = 15/251 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L    AK+        +F  +   G+ PD+++++I+IN  CK+ RV     +
Sbjct: 306 PNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNL 357

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    PN VT+ SLI GLC   RI  A  L  +        +V TYN+LINGLC+
Sbjct: 358 YKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCK 417

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL-CKEGFVDKAKELFLKMKDEN 283
            G    A+ L  +M +         +P+  T N ++ GL CK   +  A+ LF  + D+ 
Sbjct: 418 NGQLDKAIALINKMKDQG------IQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG 471

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P+V TY  +I G C     +EA  L  +M D G  P+ +TF +I+  L + G+ DKA 
Sbjct: 472 YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAE 531

Query: 344 RLLELMIWRGV 354
           +LL  MI RG+
Sbjct: 532 KLLCEMIARGL 542



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 35/274 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M      P ++ +  ++  F     +     L   +  + +QPD  T ++
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C  G+++ A  +L  ++  G  P+T T  TLI G CL  ++  A      + + G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 389 CMHDVVSYNTLINW-----------------------------------YCKNKDVEEAL 413
              D VSY TLIN                                     CK K V EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           +L+SEM  KGI   VVTY+ +  G   + ++  AL   +EM    +  D Y YN  +D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            K G V EA  +   I  +  + N+++YN LIDG
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDG 317


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 231/404 (57%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L   L         +     + S G  P +YTH++++N  CK+G+ S   V 
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + +++     P  V+++ +I  LC    + EA  LF   R     P V TYN+LI G+C 
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  LF+EM   N       KP+ VT++ ++D LCKEG V +A  +F KM    +
Sbjct: 292 SGQWKQASILFKEMLEWN------MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VTY+S+I G C ++ W E+  L  EM+ + ++PDVVTFS+ +D  CK G + +A  
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++ LMI RG+ PN  TYN+L+DGYCL  ++D ARK+F  M + GC  DV+SYN LI  YC
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K++ ++EA  L+ EM  KG+ P  +T+ TL  GL +  +   A +LF +M  +    D  
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY+  + G CK G + EAL LF A++ S+ + N V    L+ G+
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 164/452 (36%), Positives = 255/452 (56%), Gaps = 16/452 (3%)

Query: 61  KDR---ASLKKF-LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGC 116
           +DR   AS   F ++++CK     + +     +AL  F+ M+ M+P P  ++ FN L   
Sbjct: 60  RDRHKDASFDNFAVRDKCKGGSFSNFD-----DALAYFNQMVHMNPFPC-ITQFNQLLAA 113

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L + KHYD+V+S+++++   G+   +YT +ILINC C +  V  GF VLG+I +  F P+
Sbjct: 114 LVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPS 173

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            +TF +LI GLC E RI+EA            +P V+T+  ++NGLC+ G T  A+   +
Sbjct: 174 IITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMK 233

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           +M   +      C+P  V+Y+ IID LCK   V++A +LF  M+   I+P VVTY S+I 
Sbjct: 234 KMVELD------CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIY 287

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C +  W +A  LF EM++  ++PDVVTFS+++D LCK G + +A  +   MI   + P
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  TY++LI G C +     +  L   M S     DVV+++  ++ +CK   V EA S+ 
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           + M+ +G++P VVTYN+L  G     Q++ A K+FD M     A D  +YN  I G CKS
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             + EA +LF  +       N +++  LI GL
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGL 499



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 208/359 (57%), Gaps = 6/359 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++I+   L KN+  +  + LF  + S G+ P + T++ LI   C  G+     ++
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASIL 301

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+ VTF+ L+  LC E  ++EA ++F K    A EPD+ TY++LI+G+C+
Sbjct: 302 FKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCK 361

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     +  L  EM + N       +P+ VT++  +D  CK+G V +A+ +   M +  +
Sbjct: 362 SSLWKESSTLLNEMLSRN------IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY S++ G+C  +  +EA+++F  M+++G  PDV+++++++   CK+ ++D+A +
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G+ PN+ T+ TLI G C   +   A++LF  M S+GC  D+++Y+TL++ +C
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           K+  ++EAL+L+  +    +KP  V    L  G+ +  ++E A +LF  +    +  D 
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 167/424 (39%), Positives = 244/424 (57%), Gaps = 12/424 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSIL 148
           A+  F  ML + P P  +  FN+LFG +AK++HY T +SL K L+S G    D+ T +I 
Sbjct: 58  AVDFFHRMLTLTPFPC-IQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIA 116

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INC C M + + GF VLG + +    P  VT  +++ GLC E  +  A  L  K      
Sbjct: 117 INCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGY 176

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             +  TY  L+NGLC+ G T  AL   ++M   N        PN V YN I+DGLCK G 
Sbjct: 177 HCNARTYGALVNGLCKIGDTSGALECLKKMVKRN------LGPNVVVYNAILDGLCKRGL 230

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYA-NDWNEAKRLFIEMM-DQGVQPDVVTF 326
           V +A  L  +M   N+ P+VVTY  +I+G C     W E   LF EM+ ++G+ PDV TF
Sbjct: 231 VGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTF 290

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-- 384
           S+++D  CK G + +A  ++  M+  GV PN  TYN+LI GYCL  +++ A ++F  M  
Sbjct: 291 SILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVR 350

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E  GC+  VV++N+LI+ +CK K+V++A+SL SEM+ KG+ P V T+ +L  G  E+ + 
Sbjct: 351 EGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKP 410

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A +LF  M+ +    +  T    +DGL K     EA+ LFRA+  S  +L+IV YN +
Sbjct: 411 LAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIM 470

Query: 505 IDGL 508
           +DG+
Sbjct: 471 LDGM 474



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 187/372 (50%), Gaps = 14/372 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHS 146
            EAL +   M  ++  P  V+   ++ G   +   +   + LF  + +  G+ PD+ T S
Sbjct: 232 GEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFS 291

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--TKHR 204
           IL++ FCK G +     V+G ++R    PN VT+ SLI G C  S++ EA  +F      
Sbjct: 292 ILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVRE 351

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P V T+N+LI+G C+      A++L  EM  G G       P+  T+ ++I G C
Sbjct: 352 GEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMV-GKG-----LDPDVFTWTSLIGGFC 405

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF--CYANDWNEAKRLFIEMMDQGVQPD 322
           +      A+ELF  MK+    P++ T   V+ G   C+ +  +EA  LF  MM  G+  D
Sbjct: 406 EVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLD--SEAVTLFRAMMKSGLDLD 463

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +V +++++D +CK GK++ A +LL  ++ +G+  ++YTYN +I G C    +D A +L  
Sbjct: 464 IVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLR 523

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M+ NGC  +  SYN  +    +  D+  +      M  KG  P   T   L +     +
Sbjct: 524 KMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGF-PVDATTAELLIRFLSAN 582

Query: 443 QVERALKLFDEM 454
           + +++ K F ++
Sbjct: 583 EEDKSFKEFPQI 594



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 201/436 (46%), Gaps = 37/436 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N +   L      +  L L +++ + G   +  T+  L+N  CK+G  S     
Sbjct: 143 PTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALEC 202

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++++    PN V + +++ GLC    + EA  L  +  V   EP+V TYN LI GLC 
Sbjct: 203 LKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCG 262

Query: 225 T-GHTIVALNLFEEMANGNG------EFGVV----CK--------------------PNT 253
             G     + LF EM    G       F ++    CK                    PN 
Sbjct: 263 EFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNV 322

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKM--KDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           VTYN++I G C    +++A  +F  M  + E   P VVT+ S+I G+C   + ++A  L 
Sbjct: 323 VTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLL 382

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY--C 369
            EM+ +G+ PDV T++ ++   C+  K   A  L   M   G  PN  T   ++DG   C
Sbjct: 383 SEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKC 442

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             D    A  LF +M  +G   D+V YN +++  CK   + +A  L S +L KG+K    
Sbjct: 443 WLD--SEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSY 500

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN +  GL     ++ A +L  +M+ N    +  +YN F+ GL +   +  + +  + +
Sbjct: 501 TYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIM 560

Query: 490 RDSKYELNIVSYNCLI 505
           +D  + ++  +   LI
Sbjct: 561 KDKGFPVDATTAELLI 576


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 153/423 (36%), Positives = 251/423 (59%), Gaps = 9/423 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL--FKRLNSAGLFPDIYTH 145
           ++A+ +F  M++  P  P +  FN L   +AK K +D V+SL    ++   G  P I T 
Sbjct: 24  DDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           S L+N +C   R+S    ++ +++   + P+ +TFT+LI GL   ++  EA AL  +   
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C+P++ TY  ++NGLC+ G   +A NL  +M     E       + V +NTIID LCK
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ADVVIFNTIIDSLCK 196

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              VD A  LF +M+ + I P+VVTY+S+I   C    W++A +L  +M+++ + P++VT
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D   K GK  +A +L + MI R ++P+ +TYN+LI+G+C+ D++D A+++F  M 
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S  C  D+ +YNTLI  +CK+K VE+   L+ EM  +G+    VTY TL  GLF     +
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K+F +M  + V  D  TY+  +DGLC +G + +ALE+F  ++ S+ +L+I  Y  +I
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436

Query: 506 DGL 508
           +G+
Sbjct: 437 EGM 439



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 16/389 (4%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +GDI+L         F+ + +M  +     V  FN +   L K +H D  L+LFK + + 
Sbjct: 162 RGDIDLA--------FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++ T+S LI+C C  GR S    +L  ++     PN VTF +LI     E + +EA
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L       + +PD+FTYN+LING C       A  +FE M + +      C P+  TY
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------CFPDLDTY 327

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I G CK   V+   ELF +M    +  D VTYT++I+G  +  D + A+++F +M+ 
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV PD++T+S+++D LC NGK++KA  + + M    +  + Y Y T+I+G C   K+D 
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
              LF S+   G   +VV+YNT+I+  C  + ++EA +L  +M   G  P   TYNTL  
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYT 465
                     + +L  EMR      D  T
Sbjct: 508 AHLRDGDKAASAELIREMRSCRFVGDAST 536



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 206/407 (50%), Gaps = 7/407 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M++     P + ++ ++   L K    D   +L  ++ +A +  D+   + 
Sbjct: 131 SEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   V     +   +      PN VT++SLI  LC+  R  +A+ L +      
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ T+N LI+   + G  + A  L ++M   +        P+  TYN++I+G C   
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS------IDPDIFTYNSLINGFCMHD 303

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +DKAK++F  M  ++  PD+ TY ++I+GFC +    +   LF EM  +G+  D VT++
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 363

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  L  +G  D A ++ + M+  GV P+  TY+ L+DG C   K++ A ++F  M+ +
Sbjct: 364 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D+  Y T+I   CK   V++   L+  +  KG+KP VVTYNT+  GL     ++ A
Sbjct: 424 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 483

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             L  +M+ +    D+ TYN  I    + G    + EL R +R  ++
Sbjct: 484 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 530



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 31/283 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D M++     P + ++N L      +   D    +F+ + S   FPD+ T++ L
Sbjct: 272 EAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 330

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FCK  RV  G  +   +       + VT+T+LI+GL  +     A  +F +      
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK--------- 250
            PD+ TY+ L++GLC  G    AL +F+ M     +  +         +CK         
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTYNT+I GLC +  + +A  L  KMK++   PD  TY ++IR   
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              D   +  L  EM       D  T  ++ + L  +G++DK+
Sbjct: 511 RDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 552


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 161/462 (34%), Positives = 256/462 (55%), Gaps = 46/462 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F YM+R  P P  V  F  L G + +    D V+SL K++    +  + Y+ +I
Sbjct: 63  DDAIDLFGYMVRSRPLPS-VIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+ CFC   ++       G+I +  F P  VTF +L+ GLC E RI EA  LF  H++  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF--HQM-- 177

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----CK-------- 250
           C+P+V T+ TL+NGLCR G  + A+ L + M     +     +G +    CK        
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 251 -------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                        PN V YNTIIDGL K+G    A  LF++M+++ I PD+VTY  +I G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC +  W++A++L  EM+++ + PDVVTFS +++   K GK  +A  L + M+ R + P+
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           T TY+++IDG+C  +++D A  +F    + GC  D++++NTLI  YC+ K V++ + L  
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           EM   G+    +TY TL  G  ++  +  A  L  EM  + V  +  T N  +DGLC +G
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 478 FVLEALELFRAIRDSKYEL-----------NIVSYNCLIDGL 508
            + +ALE+F+A++ SK ++           ++ +YN LI GL
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGL 519



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 208/415 (50%), Gaps = 17/415 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L K+  +    +LF  +    +FPDI T++ +IN FC  GR S    +
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+ VTF++LI     E +  EA  L+ +    +  P   TY+++I+G C+
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F             C P+ +T+NT+I G C+   VD   +L  +M +  +
Sbjct: 371 QNRLDAAEHMFYLTPTKG------CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 424

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + +TYT++I GFC   D N A+ L  EM+  GV P+VVT + ++D LC NGK+  A  
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484

Query: 345 LLELMI-----------WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           + + M            + GV P+  TYN LI G     K   A +L+  M   G + D 
Sbjct: 485 MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+  CK   ++EA  ++  M SK   P VVT+NTL  G  +   V+  L+LF E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCE 604

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M +  + AD  TY   I G  K   +  AL++F+ +  S    + ++   ++ GL
Sbjct: 605 MGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 189/392 (48%), Gaps = 42/392 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +      +  +     L + +    + PD+ T S LIN F K G+      +
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+ VT++S+I G C ++R+  A  +F       C PD+ T+NTLI G CR
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR 405

Query: 225 TGHTIVALNLFEEMANGN------------------GEFGV------------VCKPNTV 254
                  + L  EM                      G+               VC PN V
Sbjct: 406 AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC-PNVV 464

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDE-----------NINPDVVTYTSVIRGFCYAND 303
           T NT++DGLC  G +  A E+F  M+              + PDV TY  +I G      
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK 524

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + EA+ L+ EM  +G+ PD +T+S ++D LCK  ++D+A+++ + M  +  +P+  T+NT
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI GYC    +D   +LF  M   G + D ++Y TLI  + K  +++ AL ++ EM+S G
Sbjct: 585 LITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           + P  +T   +  GL+   ++ERA+ + ++++
Sbjct: 645 VYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 5/213 (2%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF      ++A  LF  M+     P V+ F  +M  + + G+ D    L + M    +  
Sbjct: 55  GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N Y++  L+  +C   K+  A   F  +   G    VV++NTL++  C    + EAL L+
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     KP VVT+ TL  GL    +V  A+ L D M  + +  +  TY   +DG+CK 
Sbjct: 175 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 477 GFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
           G  + AL L R + +  + + N+V YN +IDGL
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGL 263


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 258/439 (58%), Gaps = 10/439 (2%)

Query: 70  LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           L+ER   +   DI L   ++A+ +F  M++  P P  V  FN L   + K K YD V+SL
Sbjct: 52  LRERLSKTRLRDIKL---HDAINLFREMVKTRPFPSIVD-FNRLLSAIVKMKKYDVVISL 107

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            K++   G+  D+YT +I+INCFC   +VS    VLG++L+  + P+ VT  SL+ G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            +R+ +A +L  K       PD+  YN +I+ LC+T     AL+ F+E+    G  G+  
Sbjct: 168 RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI----GRKGI-- 221

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +PN VTY  +++GLC  G  + A  L   M    I P+V+TY++++  F       EAK 
Sbjct: 222 RPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKE 281

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F EM+   + PD+VT+S +++ LC + ++D+A+++ +LM+ +G  P+  +YNTLI+G+C
Sbjct: 282 IFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFC 341

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++   KLF  M   G +++ V+YNTLI  + +  DV++A   +S+M S G+ P + 
Sbjct: 342 KAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIW 401

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L  GL +   +E+AL +F++M+++ +  D  TY   I G+CK+G V +A  LF ++
Sbjct: 402 TYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + +IV+Y  ++ GL
Sbjct: 462 SLKGLKPDIVTYTTMMSGL 480



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NIL G L  N   +  L +F+ +  + +  DI T++ +I   CK G+V   + +
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGL 457

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
              +      P+ VT+T+++ GLC +    E  AL+TK +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMK 497


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/415 (37%), Positives = 240/415 (57%), Gaps = 6/415 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F+++L      P +  F  + G L K  HY  V+SL +++   G+  ++ T SILINCF 
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           ++G  S  F V   IL+  + P+A+T T+LIKGLC +  I +A     K      + +  
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +Y TLINGLC+ G T  AL +   +       G + + + V YNTIIDG+CK+  V+ A 
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRID------GKLVRLDVVMYNTIIDGVCKDKLVNDAF 229

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           + + +M  + I P VVTY ++I G C      +A  L  +M+ + + P V TFS+++D  
Sbjct: 230 DFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAF 289

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK GK+ +A  +  +M+ + V PN  TYN+L++GYCL ++++ A  +F +M   G   DV
Sbjct: 290 CKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDV 349

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            SY+ +I+ +CK K V+EA+ L+ EM  K I P VVTYN+L  GL +  ++  ALKL  E
Sbjct: 350 HSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGE 409

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M       +  TYN+ +D LCK+  V +A+EL   ++D   + ++ +YN LI+GL
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 171/425 (40%), Positives = 241/425 (56%), Gaps = 9/425 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL-FPDIYT 144
           T ++A+  F  ML +HP PP + S N L   + K KHY TV+SL   L+S G   P + T
Sbjct: 35  TFDDAVSTFHRMLHLHP-PPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVT 93

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            SI IN    +G++   F V+ +I++  F  +  T T+L+KGLC + R  EA  L+    
Sbjct: 94  LSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAV 153

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                 D   Y TLINGLC+ G T  A+ L  +M  G        +PN + YN ++DGLC
Sbjct: 154 SKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGG------VRPNLIMYNMVVDGLC 207

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM-MDQGVQPDV 323
           KEG V +A  L  +M  + I  DV TY S+I GFC A  +  A RL  EM M + V+PDV
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDV 267

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            TF++++D LCK G + +A  +  LMI RG+ P+  + N L++G+CL   +  A+++F  
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDR 327

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G + +V+SY+TLIN YCK K V+EAL L +EM  + + P  VTYN L  GL +  +
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V     L + MR +  A D  TYN  +D   K   + +AL LF+ I D+    NI +YN 
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNI 447

Query: 504 LIDGL 508
           LIDGL
Sbjct: 448 LIDGL 452



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 215/403 (53%), Gaps = 6/403 (1%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           P +   ++ G   K + ++  L+L+    S G   D   +  LIN  CKMG+      +L
Sbjct: 126 PFTLTTLMKGLCLKGRTFEA-LNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELL 184

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
            ++ +    PN + +  ++ GLC E  + EA  L ++        DVFTYN+LI+G C  
Sbjct: 185 RKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGA 244

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           G    A+ L  EM           +P+  T+N ++D LCK G V +A+ +F  M    + 
Sbjct: 245 GQFQGAVRLLNEMVMKED-----VRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLE 299

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PDVV+  +++ G+C     +EAK +F  M+++G  P+V+++S +++  CK   +D+A RL
Sbjct: 300 PDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRL 359

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L  M  R + P+T TYN L+DG   + ++ +   L  +M ++G   D+++YN L++ Y K
Sbjct: 360 LTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLK 419

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            + +++AL+L+  ++  GI P + TYN L  GL +  +++ A ++F  +       +  T
Sbjct: 420 RECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRT 479

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YN  I+GL + G + EA  L   + D  +  N V+++ L+  L
Sbjct: 480 YNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 142/277 (51%), Gaps = 8/277 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ + + M+      P V +FNIL   L K        ++F  +   GL PD+ + + L+
Sbjct: 250 AVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALM 309

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N +C  G +S    V  R++     PN +++++LI G C    + EA  L T+       
Sbjct: 310 NGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLV 369

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           PD  TYN L++GL ++G  +   +L E M A+G         P+ +TYN ++D   K   
Sbjct: 370 PDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQA-------PDLITYNVLLDDYLKREC 422

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA  LF  + D  I+P++ TY  +I G C       AK +F  +  +G +P++ T+++
Sbjct: 423 LDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNI 482

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +++ L + G +D+A  LL  M+  G  PN  T++ L+
Sbjct: 483 MINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 250/461 (54%), Gaps = 42/461 (9%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N+ + + AL  +  M+ M P P  V  FN+LFG +AK KHY T +SL K ++  G+ P++
Sbjct: 3   NVKSVDVALDFYHKMVTMKPFPC-VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNV 61

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            TH+I+INC C++     GF VLG + +    P+ VTFT+++ GLC E  + +A      
Sbjct: 62  STHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDH 121

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +    E D +T   +INGLC+ GH+  AL+  ++M   N      C  +   Y+ ++DG
Sbjct: 122 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYSAVVDG 175

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+G V +A +LF +M  + I P++ TY  +I G C  + W EA  L   MM +G+ PD
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V TF+VI     K G + +A  +   M   G+  N  TYN++I  +C+ +++  A ++F 
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL------ 436
            M   GC+ ++V+YN+LI+ +C+ K++ +A+    EM++ G+ P VVT++TL        
Sbjct: 296 LMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAG 355

Query: 437 -----------------------------GLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
                                        GLF+ H    A+ LF E+ + +   D   Y+
Sbjct: 356 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 415

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ++G+C SG + +ALELF  +     ++++V+YN +I+GL
Sbjct: 416 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGL 456



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 183/390 (46%), Gaps = 6/390 (1%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L K  H    LS  K++       D+  +S +++  CK G V     +  ++      PN
Sbjct: 141 LCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPN 200

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
             T+  LI GLC   R  EAA L          PDV T+N +     +TG    A ++F 
Sbjct: 201 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFS 260

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
            M    G  G+  + N VTYN+II   C    +  A E+F  M  +   P++VTY S+I 
Sbjct: 261 FM----GHMGI--EHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIH 314

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G+C   + N+A     EM++ G+ PDVVT+S ++   CK GK   A  L  +M   G  P
Sbjct: 315 GWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLP 374

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  T   ++DG         A  LF  +E      D++ Y+ ++N  C +  + +AL L+
Sbjct: 375 DLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELF 434

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           S + SKG+K  VVTYN +  GL +   ++ A  L  +M  N    D  TYN F+ GL + 
Sbjct: 435 SYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRR 494

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLID 506
             + ++ +    ++   +  N  +   LI+
Sbjct: 495 YEISKSTKYLMFMKGKGFRANATTTKLLIN 524



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 21/348 (6%)

Query: 75  KSSGQG-DINLITPN---EALCIFDYMLRMHP---------SPPPVSSFNILFGCLAKNK 121
           + +G+G   NL T N     LC FD      P           P V +FN++ G   K  
Sbjct: 191 QMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTG 250

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                 S+F  +   G+  ++ T++ +I   C + ++     V   ++R    PN VT+ 
Sbjct: 251 MISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYN 310

Query: 182 SLIKGLCAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
           SLI G C E++ M  A  F    V    +PDV T++TLI G C+ G  + A  LF  M +
Sbjct: 311 SLIHGWC-ETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVM-H 368

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
            +G+      P+  T   I+DGL K  F  +A  LF +++  N + D++ Y+ ++ G C 
Sbjct: 369 KHGQL-----PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCS 423

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           +   N+A  LF  +  +GV+ DVVT++++++ LCK G +D A  LL  M   G  P+  T
Sbjct: 424 SGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECT 483

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           YN  + G     +I  + K  + M+  G   +  +   LIN++  NK+
Sbjct: 484 YNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANKE 531


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 211/336 (62%), Gaps = 6/336 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P  VTF +L+ GLC++++IM+A  LF +      EPDV TY+T+INGLC+ G+T +AL
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L ++M          CKPN V YNTIID LCK+  V +A + F +M  E I PDV TY+
Sbjct: 66  QLLKKMEEKG------CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S++ GFC     NEA  LF +M+++ V P+ VTF++++D LCK   + +A  + E M  +
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+ YTYN L+DGYC   ++D A+KLF  M+  GC  +V SYN LIN +CK+  ++EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L +EM  K + P + TY+TL  G  ++ + + A +L  EM    +  +  TY+  +DG
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G + EA EL +A+++SK E NI  Y  LI+G+
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGM 335



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 195/367 (53%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K++     +  F  +   G+ PD++T+S +++ FC +GRV+    +
Sbjct: 78  PNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN VTFT LI GLC +  I EA  +F        EPDV+TYN L++G C 
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LF  M          C PN  +YN +I+G CK G +D+AK L  +M  +++
Sbjct: 198 RSQMDEAQKLFNIMDRKG------CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ TY++++RGFC      EA+ L  EM   G+ P+++T+S+++D LCK+G +D+A  
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M    + PN + Y  LI+G C   K++ AR+LF ++   G    VV+Y  +I+   
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     EA  L+ EM   G  P   TYN +  G         A++L +EM     +AD+ 
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431

Query: 465 TYNNFID 471
           T+    D
Sbjct: 432 TFRMLSD 438



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 220/411 (53%), Gaps = 7/411 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M ++   P  V+   +L G  +K K  D V  LF  +   G  PD+ T+S +IN  CKMG
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMG 59

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
             +    +L ++      PN V + ++I  LC +  + EA   F++       PDVFTY+
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           ++++G C  G    A +LF++M   N        PN VT+  +IDGLCK+  + +A  +F
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERN------VIPNKVTFTILIDGLCKKRMISEAWLVF 173

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M ++ + PDV TY +++ G+C  +  +EA++LF  M  +G  P+V +++++++  CK+
Sbjct: 174 ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKS 233

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++D+A  LL  M  + + P+ +TY+TL+ G+C   +   A++L   M S G + ++++Y
Sbjct: 234 GRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           + +++  CK+  ++EA  L   M    I+P +  Y  L  G+    ++E A +LF  +  
Sbjct: 294 SIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFV 353

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +     TY   I GL K G   EA ELFR +  +    N  +YN +I G
Sbjct: 354 KGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 85/160 (53%)

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ P   T+NTL+ G C   KI  A KLF  M   G   DV++Y+T+IN  CK  +
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
              AL L  +M  KG KP VV YNT+   L +   V  A+  F EM +  +  D +TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + G C  G V EA  LF+ + +     N V++  LIDGL
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGL 160


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 141/403 (34%), Positives = 236/403 (58%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N+L     K         L K +  +GL P++ T+S +I+ FC+  +V   + +
Sbjct: 40  PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ +   PN VT+ +L+ GLC    + EA  L  + R    +PD F+Y+TL+ GLC+
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           TG   +AL +FE+ +NG+      C P+ V Y+T+I GLCK G +D+A +LF KM++ + 
Sbjct: 160 TGKIDMALKVFEDNSNGD------CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSC 213

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVT+T+++ G C  +   EA+++   M D+   P+V+T+S ++D LCK G++  A  
Sbjct: 214 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 273

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + MI RG+ PN  TYN+LI G+C+T+ +D A  L   M + GC+ D+++YNTLI+  C
Sbjct: 274 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 333

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     EA  L+ +M +K   P V+TY+ L  G  ++ +++ A  LFD+M +  V  D  
Sbjct: 334 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 393

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T++  ++G C +G V +A  L   +  S    ++ +Y  L+DG
Sbjct: 394 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 436



 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/407 (37%), Positives = 225/407 (55%), Gaps = 9/407 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V +++ L   L K    D    LF+++      PD+ T + L++  CK  R+     
Sbjct: 179 PPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL  +     TPN +T++SLI GLC   ++ +A  +F +  V   EP+V TYN+LI+G C
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298

Query: 224 RTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            T     AL L EEM A G       C P+ +TYNT+IDGLCK G   +A  LF  MK +
Sbjct: 299 MTNGVDSALLLMEEMTATG-------CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 351

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             NPDV+TY+ +I GFC     + A+ LF +M+ Q V PDVVTFS +++  C  G +D A
Sbjct: 352 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 411

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            RLLE M+    +P+ YTY +L+DG+C   ++  AR++   M   GC  +VV+Y  LI+ 
Sbjct: 412 ERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA 471

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN-HVAA 461
           +C+      A  L  EM+  G++P V+TY +L  G      +E A K+ + + R+ +  A
Sbjct: 472 FCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKA 531

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D + Y   +DGLC++G +  ALEL  AI+ S        Y  LI GL
Sbjct: 532 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578



 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 138/403 (34%), Positives = 213/403 (52%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L +N   D    L   +   GL PD +++  L+   CK G++     V
Sbjct: 110 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                     P+ V +++LI GLC   R+ EA  LF K R  +CEPDV T+  L++GLC+
Sbjct: 170 FEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 229

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + E M + N      C PN +TY+++IDGLCK G V  A+E+F +M    I
Sbjct: 230 GDRLQEAQQVLETMEDRN------CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY S+I GFC  N  + A  L  EM   G  PD++T++ ++D LCK G+  +A+R
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  +  NP+  TY+ LI G+C  ++ID AR LF  M     + DVV+++TL+  YC
Sbjct: 344 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 403

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               V++A  L  EM++    P V TY +L  G  ++ ++  A ++   M +     +  
Sbjct: 404 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   ID  C++G    A +L   +  +  + N+++Y  LI G
Sbjct: 464 TYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           ++ T +I+I+  CK  R+        ++ +    PN  T+  LI G C   ++  A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + +     P+V TY+T+I+G CR      A  LF +M   NG     C PN VTYNT++
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVTYNTLL 119

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            GLC+ G +D+A EL  +M++  + PD  +Y +++ G C     + A ++F +  +    
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 179

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PDVV +S ++  LCK G++D+A +L E M      P+  T+  L+DG C  D++  A+++
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
             +ME   C  +V++Y++LI+  CK   V +A  ++  M+ +GI+P VVTYN+L  G   
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
            + V+ AL L +EM       D  TYN  IDGLCK+G   EA  LF  ++      ++++
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359

Query: 501 YNCLIDG 507
           Y+CLI G
Sbjct: 360 YSCLIGG 366



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 215/423 (50%), Gaps = 9/423 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M R +   P V +F  L   L K         + + +      P++ T+S 
Sbjct: 199 DEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     V  R++     PN VT+ SLI G C  + +  A  L  +     
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD+ TYNTLI+GLC+TG    A  LF +M     +F   C P+ +TY+ +I G CK  
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDM---KAKF---CNPDVITYSCLIGGFCKLE 371

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A+ LF  M  + + PDVVT+++++ G+C A   ++A+RL  EM+     PDV T++
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK G+M +A R+L+ M  RG  PN  TY  LID +C   K   A KL   M  N
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEM-LSKGIKPTVVTYNTLFLGLFEIHQVER 446
           G   +V++Y +LI  +C   D+EEA  +   +   +  K  +  Y  +  GL    ++  
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-KYELNIVSYNCLI 505
           AL+L + ++++        Y   I GLC+   + +A+E+   +  S K   N  +Y  +I
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611

Query: 506 DGL 508
             L
Sbjct: 612 QEL 614



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/300 (38%), Positives = 177/300 (59%), Gaps = 6/300 (2%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CE +V T+  +I+GLC+      A   F +M       G V  PN  TYN +I+G CK  
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVH 56

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  L  +MK+  + P+VVTY++VI GFC     + A +LF +M++ G  P++VT++
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC+NG MD+A  LL+ M  RG+ P+ ++Y+TL+ G C T KID A K+F    + 
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  DVV+Y+TLI   CK   ++EA  L+ +M     +P VVT+  L  GL +  +++ A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++ + M   +   +  TY++ IDGLCK+G V +A E+F+ +     E N+V+YN LI G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 142/260 (54%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C+ N +T+  +IDGLCK   + +A   F KMK +   P+  TY  +I GFC  +  + A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM + G+ P+VVT+S ++   C+  K+D A +L   M+  G  PN  TYNTL+ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    +D A +L   M   G   D  SY+TL+   CK   ++ AL ++ +  +    P V
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           V Y+TL  GL +  +++ A KLF++MR N    D  T+   +DGLCK   + EA ++   
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + D     N+++Y+ LIDGL
Sbjct: 243 MEDRNCTPNVITYSSLIDGL 262



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 31/202 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K         + KR+   G  P++ T++ LI+ FC+ G+ +  + +
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKL 484

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLC 223
           L  ++ +   PN +T+ SLI G C    + EA  +  +  R   C+ D+F Y  +++GLC
Sbjct: 485 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLC 544

Query: 224 RTGHTIVALNLFEEMANGN------------------GEFGVV------------CKPNT 253
           RTG    AL L E +                       E G               +PN 
Sbjct: 545 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNA 604

Query: 254 VTYNTIIDGLCKEGFVDKAKEL 275
             Y  +I  L +EG  ++A  L
Sbjct: 605 EAYEAVIQELAREGRHEEANAL 626


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 162/440 (36%), Positives = 250/440 (56%), Gaps = 26/440 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M+ MHP P  +  F  + G +AK ++Y T + L+  +   G+ P   T +I
Sbjct: 36  DDAVALFHRMVDMHPLPS-IVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC MG++   F V+G+IL+    PN VTFT+L+KG C   ++++A  ++ +     
Sbjct: 95  LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154

Query: 208 CEPDVFTYNTLINGLCRT--GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              D   Y TLINGLC++  G    A+ L ++M     E   + KPN + YNT++ GLCK
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKM-----EERQLVKPNLIMYNTVVHGLCK 209

Query: 266 EGFVDKAKELFLKMKDENINPDVVTY----------------TSVIRGFCYANDWNEAKR 309
           +G +++A+ L  KM  + I PD+ TY                TS++ GFC  N  +EA+ 
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF  M+++G Q D++ ++++M+  C N K+ +A +L  +M+ RG  P+T TY  L+ GYC
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           L DK+D AR LF  M   G + DV SYN LI  YCK + V EA++L  +M  K + P ++
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRR-NHVAADTYTYNNFIDGLCKSGFVLEALELFR- 487
           TYN++  GL +   +  A KL DEM        D  TYN  ++ LC+   V +A+  F+ 
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            I +  +  N+ SYN LI G
Sbjct: 450 LIFERSFAPNVWSYNILISG 469



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 214/475 (45%), Gaps = 91/475 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC----------- 153
           P   +FNIL  C       D   S+  ++   G  P++ T + L+  FC           
Sbjct: 87  PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146

Query: 154 --------------------------KMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKG 186
                                     K+G+      +L ++  R    PN + + +++ G
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH---TIVALNLF-------- 235
           LC +  I EA  L +K  V    PD+FTY++LI GLCR G        LN F        
Sbjct: 207 LCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDE 266

Query: 236 -EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             E+ N   E G   + + + YN +++G C    V +A++LF  M +    PD +TYT +
Sbjct: 267 ARELFNVMIERGE--QHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTIL 324

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           + G+C  +  +EA+ LF  M+++G+ PDV ++++++   CK  ++ +A  LLE M  + +
Sbjct: 325 MHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNL 384

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSME----------------------------- 385
            PN  TYN+++DG C +  I  A KL   M                              
Sbjct: 385 VPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAI 444

Query: 386 --------SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
                         +V SYN LI+  CKN+ ++EA++L++ M  K + P +VTYN L   
Sbjct: 445 AFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDA 504

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF--VLEALELFRAIR 490
           LF   Q+++A+ L  ++    ++ +  TYN  I+GL K G     + + L+ +IR
Sbjct: 505 LFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIR 559



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 9/319 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M+        + ++NIL      N        LF  +   G  PD  T++I
Sbjct: 265 DEARELFNVMIE-RGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +C + +V     +   ++     P+  ++  LIKG C   R+ EA  L     +  
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ TYN++++GLC++G  + A  L +EM      +     P+  TYN +++ LC+  
Sbjct: 384 LVPNIITYNSVVDGLCKSGGILDAWKLVDEM-----HYCCQPPPDVTTYNILLESLCRIE 438

Query: 268 FVDKAKELFLKMK-DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            V+KA   F  +  + +  P+V +Y  +I G C     +EA  LF  M  + + PD+VT+
Sbjct: 439 CVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTY 498

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D L    ++DKA  LL  ++ +G++PN  TYN LI+G     +   A+K+ + +  
Sbjct: 499 NILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSI 558

Query: 387 NGCMHDVVSYNTLINWYCK 405
            G   DV +Y  +IN  CK
Sbjct: 559 RGYHPDVKTY--IINELCK 575


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  287 bits (735), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 141/403 (34%), Positives = 236/403 (58%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N+L     K         L K +  +GL P++ T+S +I+ FC+  +V   + +
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ +   PN VT+ +L+ GLC    + EA  L  + R    +PD F+Y+TL+ GLC+
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           TG   +AL +FE+ +NG+      C P+ V Y+T+I GLCK G +D+A +LF KM++ + 
Sbjct: 279 TGKIDMALKVFEDNSNGD------CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC 332

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVT+T+++ G C  +   EA+++   M D+   P+V+T+S ++D LCK G++  A  
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 392

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + MI RG+ PN  TYN+LI G+C+T+ +D A  L   M + GC+ D+++YNTLI+  C
Sbjct: 393 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     EA  L+ +M +K   P V+TY+ L  G  ++ +++ A  LFD+M +  V  D  
Sbjct: 453 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 512

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T++  ++G C +G V +A  L   +  S    ++ +Y  L+DG
Sbjct: 513 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 555



 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/407 (37%), Positives = 225/407 (55%), Gaps = 9/407 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V +++ L   L K    D    LF+++      PD+ T + L++  CK  R+     
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL  +     TPN +T++SLI GLC   ++ +A  +F +  V   EP+V TYN+LI+G C
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417

Query: 224 RTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            T     AL L EEM A G       C P+ +TYNT+IDGLCK G   +A  LF  MK +
Sbjct: 418 MTNGVDSALLLMEEMTATG-------CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             NPDV+TY+ +I GFC     + A+ LF +M+ Q V PDVVTFS +++  C  G +D A
Sbjct: 471 FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 530

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            RLLE M+    +P+ YTY +L+DG+C   ++  AR++   M   GC  +VV+Y  LI+ 
Sbjct: 531 ERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA 590

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN-HVAA 461
           +C+      A  L  EM+  G++P V+TY +L  G      +E A K+ + + R+ +  A
Sbjct: 591 FCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKA 650

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D + Y   +DGLC++G +  ALEL  AI+ S        Y  LI GL
Sbjct: 651 DMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/403 (34%), Positives = 212/403 (52%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L +N   D    L   +   GL PD +++  L+   CK G++     V
Sbjct: 229 PNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                     P+ V +++LI GLC   R+ EA  LF K R  +CEPDV T+  L++GLC+
Sbjct: 289 FEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 348

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + E M + N      C PN +TY+++IDGLCK G V  A+E+F +M    I
Sbjct: 349 GDRLQEAQQVLETMEDRN------CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY S+I GFC  N  + A  L  EM   G  PD++T++ ++D LCK G+  +A+R
Sbjct: 403 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 462

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  +  NP+  TY+ LI G+C  ++ID AR LF  M     + DVV+++TL+  YC
Sbjct: 463 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 522

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               V++A  L  EM++    P V TY +L  G  ++ ++  A ++   M +     +  
Sbjct: 523 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   ID  C++G    A  L   +  +  + N+++Y  LI G
Sbjct: 583 TYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/421 (33%), Positives = 228/421 (54%), Gaps = 9/421 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ AL  F +  +       V ++N LF  L + +  D    + K     G+ P+++T++
Sbjct: 4   PDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYA 63

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++I   CK G +     +L  +  S   P+A  +  +I  LC      +A   F   R  
Sbjct: 64  VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSM 120

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            CE +V T+  +I+GLC+      A   F +M       G V  PN  TYN +I+G CK 
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKV 174

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V +A  L  +MK+  + P+VVTY++VI GFC     + A +LF +M++ G  P++VT+
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LC+NG MD+A  LL+ M  RG+ P+ ++Y+TL+ G C T KID A K+F    +
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C  DVV+Y+TLI   CK   ++EA  L+ +M     +P VVT+  L  GL +  +++ 
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A ++ + M   +   +  TY++ IDGLCK+G V +A E+F+ +     E N+V+YN LI 
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 507 G 507
           G
Sbjct: 415 G 415



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 9/423 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ M R +   P V +F  L   L K         + + +      P++ T+S 
Sbjct: 318 DEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     V  R++     PN VT+ SLI G C  + +  A  L  +     
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD+ TYNTLI+GLC+TG    A  LF +M     +F   C P+ +TY+ +I G CK  
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDM---KAKF---CNPDVITYSCLIGGFCKLE 490

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A+ LF  M  + + PDVVT+++++ G+C A   ++A+RL  EM+     PDV T++
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK G+M +A R+L+ M  RG  PN  TY  LID +C   K   A +L   M  N
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEM-LSKGIKPTVVTYNTLFLGLFEIHQVER 446
           G   +V++Y +LI  +C   D+EEA  +   +   +  K  +  Y  +  GL    ++  
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-KYELNIVSYNCLI 505
           AL+L + ++++        Y   I GLC+   + +A+E+   +  S K   N  +Y  +I
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730

Query: 506 DGL 508
             L
Sbjct: 731 QEL 733



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 189/372 (50%), Gaps = 9/372 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G   ++YT++ L     +  R+     +L        TPN  T+  +I+GLC    + +A
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L  + R     PD   YN +I+ LC+  +T  AL+ F  M          C+ N +T+
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---------CEKNVITW 129

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
             +IDGLCK   + +A   F KMK +   P+  TY  +I GFC  +  + A  L  EM +
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G+ P+VVT+S ++   C+  K+D A +L   M+  G  PN  TYNTL+ G C    +D 
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 249

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A +L   M   G   D  SY+TL+   CK   ++ AL ++ +  +    P VV Y+TL  
Sbjct: 250 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 309

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  +++ A KLF++MR N    D  T+   +DGLCK   + EA ++   + D     
Sbjct: 310 GLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369

Query: 497 NIVSYNCLIDGL 508
           N+++Y+ LIDGL
Sbjct: 370 NVITYSSLIDGL 381



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 31/202 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K         + KR+   G  P++ T++ LI+ FC+ G+ +  + +
Sbjct: 544 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRL 603

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLC 223
           L  ++ +   PN +T+ SLI G C    + EA  +  +  R   C+ D+F Y  +++GLC
Sbjct: 604 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLC 663

Query: 224 RTGHTIVALNLFEEMANGN------------------GEFGVV------------CKPNT 253
           RTG    AL L E +                       E G               +PN 
Sbjct: 664 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNA 723

Query: 254 VTYNTIIDGLCKEGFVDKAKEL 275
             Y  +I  L +EG  ++A  L
Sbjct: 724 EAYEAVIQELAREGRHEEANAL 745



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%)

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            +G    V TYN LF  L    +++    +        +  + +TY   I GLCKSG + 
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           +A EL   +R+S    +   YN +I  L
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHAL 104


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 164/423 (38%), Positives = 244/423 (57%), Gaps = 24/423 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK-HYDTVLSLFKRLNSAGLFPDIYTHS 146
           + A+  F+ M ++  +P  V  FN +   L K K HY TVLSL  ++ S G+ PD++T S
Sbjct: 48  DNAVLSFNRMRQIRQTPSIVE-FNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV- 205
           ILINC+C +G+++  F V  +IL+               GLC   ++ E A LF  H + 
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKM--------------GLCLNGKVNE-ALLFHDHVLA 151

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                +  TY  LINGLC+ G T  AL +  ++       G +   N V Y+TIIDGLCK
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTIIDGLCK 205

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V  A  L+ +M  + I P VVT++S+I GFC    + +A RLF EM+ + + PD  T
Sbjct: 206 DKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYT 265

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F++++D LCK GK+ +A  ++ +M+  GV P   TYNTL+DGYCL +++  A+ +   + 
Sbjct: 266 FNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIIS 325

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 +  SYN +IN +CK K V+EAL L+ EM  +GI P  VTYN+L  GL +  ++ 
Sbjct: 326 RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIP 385

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A +L DEM  N + AD  TYN+ ID  CK+  V +A+ L + I++   + N+ +YN LI
Sbjct: 386 YAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILI 445

Query: 506 DGL 508
           DGL
Sbjct: 446 DGL 448



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 208/386 (53%), Gaps = 13/386 (3%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           +D VL+L   LN         T+ ILIN  CKMG+      VL +I       N V +++
Sbjct: 146 HDHVLALGFHLNHV-------TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYST 198

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           +I GLC +  + +A  L+++  V    P V T+++LI G C  G    A  LF EM   N
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                   P+  T+N ++D LCKEG + +AK +   M  E + P VVTY +++ G+C  N
Sbjct: 259 ------INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           +  +AK +   +    V P+  +++++++  CK   +D+A  L   M  RG+ P+  TYN
Sbjct: 313 EVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYN 372

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +LIDG C   +I +A +L   M +N    D+V+YN+LI+ +CKN+ V++A++L  ++   
Sbjct: 373 SLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           GI+P + TYN L  GL +  Q++ A  +F ++       + +TYN  I+GLCK G   EA
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA 492

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             L   + D+    + V+Y  +I  L
Sbjct: 493 EVLLSKMEDNGIIPDAVTYETIIQAL 518



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 183/358 (51%), Gaps = 20/358 (5%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V +F+ L         +     LF  +    + PD YT +IL++  CK G++     
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V+  +++    P  VT+ +L+ G C  + + +A  + +        P+  +YN +ING C
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           +      AL LF EM          C+   P+ VTYN++IDGLCK G +  A EL  +M 
Sbjct: 345 KIKMVDEALCLFHEMC---------CRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +  I  D+VTY S+I  FC     ++A  L  ++ + G+QP++ T+++++D LCK G++ 
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLK 455

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A  + + ++ +G N N +TYN +I+G C     D A  L   ME NG + D V+Y T+I
Sbjct: 456 NAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETII 515

Query: 401 NWYCKNKDVEEALSLYSEMLSKG-------IKPTVVTYNTLFLGLFEIHQVERALKLF 451
                  + E+A  L  EM+ KG       I+ T+V   TL LG+  I  +  AL+ F
Sbjct: 516 QALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVG-RTLNLGMNLISLLFSALECF 572



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 172/352 (48%), Gaps = 14/352 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  ++ +   L K+K       L+  +    + P + T S LI  FC +G+    F +  
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFN 252

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     P+A TF  L+  LC E +I EA  +         EP V TYNTL++G C   
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC--- 309

Query: 227 HTIVALNLFEEMANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
                  L  E+        ++ +    PN+ +YN +I+G CK   VD+A  LF +M   
Sbjct: 310 -------LVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCR 362

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I P  VTY S+I G C A     A  L  EM +  +  D+VT++ ++D  CKN  +DKA
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKA 422

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L++ +   G+ PN  TYN LIDG C   ++ +A+ +F  +   G   +  +YN +IN 
Sbjct: 423 IALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMING 482

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            CK    +EA  L S+M   GI P  VTY T+   LF   + E+A KL  EM
Sbjct: 483 LCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREM 534



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 46/90 (51%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           ++ H   P + ++NIL   L K         +F+ L   G   + +T++I+IN  CK G 
Sbjct: 429 IKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGL 488

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
                V+L ++  +   P+AVT+ ++I+ L
Sbjct: 489 FDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/423 (37%), Positives = 236/423 (55%), Gaps = 7/423 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T +EAL  F+ ML   P PP    FN L   +AK KH+ T+LSL ++++S G+ PD+YT 
Sbjct: 25  TLDEALSTFNRMLHKQP-PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +I+IN  C + RV   F  L +IL+    P+A TFT+LI+GLC E +I EA  LF K   
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+V TY TLINGLC+      A N+F EM            PN VTYN++I GLCK
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG------ISPNIVTYNSLIHGLCK 197

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
                    L  +M D  I PDV T  +V+   C      EA  +   M+ +GV+P+VVT
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ +MD  C   ++D A ++ + M+ +    N  +YNTLI+GYC    +D A  LF  M 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 + V+YNTLI+  C    +++A+SL+ EM+++G  P +VTY TL   L +   ++
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A+ L   +  ++   D   Y   +DG+C++G + +A +LF  +     + N+ +YN +I
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 506 DGL 508
            GL
Sbjct: 438 HGL 440



 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 149/407 (36%), Positives = 230/407 (56%), Gaps = 20/407 (4%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F+ ML MHP PP    F  L   +AK KHY TVLSL  +++S G+ PD+YT 
Sbjct: 561 TLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILIN FC + R+ + F VL ++L+  F P+ VT+ +L+ GLC          + TK   
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------MITK--- 667

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PD+FTYN+LI+ LC          L  EM N          PN V ++T++D LCK
Sbjct: 668 -GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK------IMPNVVVFSTVVDALCK 720

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG +  A ++   M    + PDVVTYT+++ G C  ++ +EA ++F  M+ +G  P+V +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++++++  C+  +MDKA  LLE M  +G+  +T TYNTLI G C   ++ HA  LF  M 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++G + D+V+Y  L+++ CKN  + EA+ L   +    +   ++ YN    G+    ++E
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            A  LF  +    +  D  TYN  I GLCK G + EA +LFR + ++
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 200/390 (51%), Gaps = 7/390 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +FD M+      P V ++  L   L K++      ++F  + + G+ P+I T++ L
Sbjct: 133 EALHLFDKMIG-EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK+    H   ++  ++ S   P+  T  +++  LC E  + EA  +         
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           EP+V TYN L++G C      VA+ +F+ M + +      C  N ++YNT+I+G CK   
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQS 305

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VDKA  LF +M  + + P+ VTY ++I G C+     +A  LF EM+ +G  PD+VT+  
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           + D LCKN  +DKA  LL+ +     +P+   Y T++DG C   +++ AR LF ++ S G
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +V +YN +I+  CK   + EA  L+SEM   G  P   TYN +  G    ++  R +
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 485

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +L +EM     + D  T    +  L   G 
Sbjct: 486 ELLEEMLARGFSVDVSTTTLLVGMLSDDGL 515



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 185/342 (54%), Gaps = 19/342 (5%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+L     P+ V FT L+  +          +L T+   F   PDV+T N LIN  C   
Sbjct: 571 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 630

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A ++  ++     + G   +P+ VTY T+++GLCK             M  + I+P
Sbjct: 631 RLGYAFSVLAKLL----KLGF--QPDVVTYGTLMNGLCK-------------MITKGISP 671

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+ TY S+I   C   +W     L  EM++  + P+VV FS ++D LCK G +  A  ++
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           ++MI RGV P+  TY  L+DG+CL  ++D A K+F +M   GC+ +V SYN LIN YC+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           + +++A+ L  +M  +G+    VTYNTL  GL  + +++ A+ LF EM  +    D  TY
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +D LCK+  + EA+ L +AI  S  + +I+ YN  IDG+
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 893



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 195/469 (41%), Gaps = 74/469 (15%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+N L     K +  D  + LF+ ++   L P+  T++ LI+  C +GR+     +  
Sbjct: 290 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 349

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     P+ VT+ +L   LC    + +A AL         +PD+  Y T+++G+CR G
Sbjct: 350 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 409

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A +LF  +++         +PN  TYN +I GLCK+G + +A +LF +M     +P
Sbjct: 410 ELEDARDLFSNLSSKG------LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 463

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG--------- 337
           +  TY  + RGF   N+      L  EM+ +G   DV T ++++  L  +G         
Sbjct: 464 NDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523

Query: 338 -------------------------------------KMDKASRLLELMIWRGVNPNTYT 360
                                                 +D A      M+     P+T  
Sbjct: 524 CKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVD 583

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           +  L+              L   M+S G   DV + N LIN +C  + +  A S+ +++L
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643

Query: 421 SKGIKPTVVTYNTLFLGLFE----------------IHQV------ERALKLFDEMRRNH 458
             G +P VVTY TL  GL +                IH +      +    L +EM  + 
Sbjct: 644 KLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 703

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  +   ++  +D LCK G +  A ++   +     E ++V+Y  L+DG
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 752


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/422 (36%), Positives = 236/422 (55%), Gaps = 36/422 (8%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F+ +L      PP+  F  + G L K   Y T +SL +++   G+  ++ T +ILINCF 
Sbjct: 47  FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           ++G+    F V   IL+  + PN +T T+LIKGLC +                       
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK----------------------V 144

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +Y TLINGLC+ G    AL L   +       G + +PN V YNTIID +CK   V++A 
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAF 198

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L+ +M  E I+PDVVTY+++I GF       +A  LF +M+ + ++PDV TF++++D  
Sbjct: 199 DLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 258

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK+GKM +   +  +M+ +G+ PN  TY +L+DGYCL  +++ A  +F +M   G   D 
Sbjct: 259 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDT 318

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            SYN +IN +CK K V+EA++L+ +M  K I P VVTY +L  GL +  ++  ALKL DE
Sbjct: 319 QSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDE 378

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE--------LNIVSYNCLI 505
           M    V  D  TY++ +D LCK+  V +A+ L   ++D  +E        L++ +Y  +I
Sbjct: 379 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMI 438

Query: 506 DG 507
            G
Sbjct: 439 QG 440



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 174/328 (53%), Gaps = 14/328 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   + K K  +    L+  + S G+ PD+ T+S LI+ F  +G++     +
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P+  TF  L+ G C + ++ E   +F        +P+V TY +L++G C 
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  MA G    GV   P+T +YN +I+G CK   VD+A  LF KM  +NI
Sbjct: 296 VKQVNKANSIFNTMAQG----GV--NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTYTS+I G C +   + A +L  EM D+GV PD++T+S I+D LCKN ++DKA  
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 345 LL--------ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           LL        E +  +G N + Y Y  +I G+C+    + A  L   ME NG + D  +Y
Sbjct: 410 LLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGI 424
             +I    K  + + A  L  EM+++G+
Sbjct: 470 EIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 38/304 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  ++  M+    SP  V+   ++ G     K  D +  LF ++    + PD+YT +I
Sbjct: 195 NEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI-DLFNKMILENIKPDVYTFNI 253

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G++  G  V   +++    PN VT+ SL+ G C   ++ +A ++F       
Sbjct: 254 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGG 313

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK-------- 250
             PD  +YN +ING C+      A+NLF++M   N    VV         CK        
Sbjct: 314 VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYAL 373

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE--------NINPDVVT 290
                       P+ +TY++I+D LCK   VDKA  L  K+KD+          N DV  
Sbjct: 374 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYA 433

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YT +I+GFC    +NEA  L  +M D G  PD  T+ +I+  L K  + D A +LL  MI
Sbjct: 434 YTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMI 493

Query: 351 WRGV 354
            RG+
Sbjct: 494 ARGL 497


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 249/461 (54%), Gaps = 42/461 (9%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N+ + + AL  +  M+ M P P  V  FN+LFG +AK KHY T +SL K ++  G+ P++
Sbjct: 55  NVKSVDVALDFYHKMVTMKPFPC-VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNV 113

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            TH+I+INC C++     GF VLG + +    P+ VTFT+++ GLC E  + +A      
Sbjct: 114 PTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDH 173

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +    E D +T   +INGLC+ GH+  AL+  ++M   N      C  +   YN ++DG
Sbjct: 174 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYNAVVDG 227

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+G V +A +LF +M  + I PD+ TY  +I G C  + W EA  L   MM +G+ PD
Sbjct: 228 LCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 287

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V TF+VI     K G + +A  +   M   G+  +  TY+++I  +C+ +++  A ++F 
Sbjct: 288 VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFD 347

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL-------- 434
            M   GC+ ++V+Y +LI+ +C+ K++ +A+    EM++ G+ P +VT+NTL        
Sbjct: 348 LMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAG 407

Query: 435 ---------------------------FLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
                                        GLF+ H    A+ LF E+ + +   D   Y+
Sbjct: 408 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 467

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ++G+C SG + +ALELF  +     ++++V+YN +I+GL
Sbjct: 468 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGL 508



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 195/437 (44%), Gaps = 41/437 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  +   L    +    +     L   G   D YT   +IN  CK+G  S     
Sbjct: 146 PSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSY 205

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC- 223
           L ++       +   + +++ GLC +  + EA  LF++      +PD+FTYN LI+GLC 
Sbjct: 206 LKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCN 265

Query: 224 ----------------------------------RTGHTIVALNLFEEMANGNGEFGVVC 249
                                             +TG    A ++F  M    G  G+  
Sbjct: 266 FDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFM----GHMGI-- 319

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           + + VTY++II   C    +  A E+F  M  +   P++VTYTS+I G+C   + N+A  
Sbjct: 320 EHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMY 379

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
              EM++ G+ P++VT++ ++   CK GK   A  L  +M   G  P+  T   ++DG  
Sbjct: 380 FLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLF 439

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                  A  LF  +E      D++ Y+ ++N  C +  + +AL L+S + SKG+K  VV
Sbjct: 440 KCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVV 499

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN +  GL +   ++ A  L  +M  N    D  TYN F+ GL +   + ++ +    +
Sbjct: 500 TYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFM 559

Query: 490 RDSKYELNIVSYNCLID 506
           +   +  N  +   LI+
Sbjct: 560 KGKGFRANATTTKLLIN 576



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 8/305 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN++ G   K        S+F  +   G+  D+ T+S +I   C + ++     V
Sbjct: 286 PDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEV 345

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLC 223
              ++R    PN VT+TSLI G C E + M  A  F    V    +P++ T+NTLI G C
Sbjct: 346 FDLMIRKGCLPNIVTYTSLIHGWC-EIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFC 404

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G  + A  LF  M + +G+      P+  T   I+DGL K  F  +A  LF +++  N
Sbjct: 405 KAGKPVAAKELFFVM-HKHGQL-----PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMN 458

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            + D++ Y+ ++ G C +   N+A  LF  +  +GV+ DVVT++++++ LCK G +D A 
Sbjct: 459 SDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAE 518

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M   G  P+  TYN  + G     +I  + K  + M+  G   +  +   LIN++
Sbjct: 519 DLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYF 578

Query: 404 CKNKD 408
             NK+
Sbjct: 579 SANKE 583



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 92/215 (42%)

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +D L     VD A + + KM      P V  +  +         +  A  L   M   GV
Sbjct: 50  LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGV 109

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P+V T +++++ LC+         +L LM   GV P+  T+ T+++G C+   +  A +
Sbjct: 110 KPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIR 169

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
               ++  G   D  +   +IN  CK      ALS   +M  +     V  YN +  GL 
Sbjct: 170 FVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLC 229

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +   V  A  LF +M    +  D +TYN  I GLC
Sbjct: 230 KDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLC 264



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 6/182 (3%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH---ARKLFVSMES 386
           +D L     +D A      M+     P    +N L   + +  K+ H   A  L   M  
Sbjct: 50  LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLL---FGIVAKMKHYTTAISLIKHMSY 106

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   +V ++N +IN  C+        S+   M   G++P++VT+ T+  GL     V +
Sbjct: 107 IGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQ 166

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A++  D ++     +D YT    I+GLCK G    AL   + + +    L++ +YN ++D
Sbjct: 167 AIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVD 226

Query: 507 GL 508
           GL
Sbjct: 227 GL 228



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 58/129 (44%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           +++  H   P + +  I+   L K   +   +SLF+ L       DI  +SI++N  C  
Sbjct: 417 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 476

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+++    +   +       + VT+  +I GLC E  + +A  L  K     C PD  TY
Sbjct: 477 GKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTY 536

Query: 216 NTLINGLCR 224
           N  + GL R
Sbjct: 537 NVFVQGLLR 545


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/439 (34%), Positives = 251/439 (57%), Gaps = 10/439 (2%)

Query: 70  LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           L+ER   +   DI L   N+A+ +F  M++  P P  V  FN L   + K K YD V+SL
Sbjct: 52  LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISL 107

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            K++   G+  D+YT +I+INCFC   +VS    +LG++L+  + P+ VT  SL+ G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            +R+ +A +L  K      +PD+  YN +I+ LC+T     A + F+E+           
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------I 221

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +PN VTY  +++GLC       A  L   M  + I P+V+TY++++  F       EAK 
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF EM+   + PD+VT+S +++ LC + ++D+A+++ +LM+ +G   +  +YNTLI+G+C
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++   KLF  M   G + + V+YNTLI  + +  DV++A   +S+M   GI P + 
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L  GL +  ++E+AL +F++M++  +  D  TY   I G+CK+G V EA  LF ++
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + +IV+Y  ++ GL
Sbjct: 462 SLKGLKPDIVTYTTMMSGL 480



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 204/382 (53%), Gaps = 13/382 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL I   ML++   P  V+  +++ G   +N+  D V SL  ++   G  PDI  ++ +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 197

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK  RV+  F     I R    PN VT+T+L+ GLC  SR  +AA L +        
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V TY+ L++   + G  + A  LFEEM        +   P+ VTY+++I+GLC    +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVR------MSIDPDIVTYSSLINGLCLHDRI 311

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A ++F  M  +    DVV+Y ++I GFC A    +  +LF EM  +G+  + VT++ +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    + G +DKA      M + G++P+ +TYN L+ G C   +++ A  +F  M+    
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE---IHQVER 446
             D+V+Y T+I   CK   VEEA SL+  +  KG+KP +VTY T+  GL     +H+VE 
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE- 490

Query: 447 ALKLFDEMRRNHVAADTYTYNN 468
              L+ +M++  +  +  T ++
Sbjct: 491 --ALYTKMKQEGLMKNDCTLSD 510


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/439 (34%), Positives = 251/439 (57%), Gaps = 10/439 (2%)

Query: 70  LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           L+ER   +   DI L   N+A+ +F  M++  P P  V  FN L   + K K YD V+SL
Sbjct: 52  LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISL 107

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            K++   G+  D+YT +I+INCFC   +VS    +LG++L+  + P+ VT  SL+ G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            +R+ +A +L  K      +PD+  YN +I+ LC+T     A + F+E+           
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------I 221

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +PN VTY  +++GLC       A  L   M  + I P+V+TY++++  F       EAK 
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF EM+   + PD+VT+S +++ LC + ++D+A+++ +LM+ +G   +  +YNTLI+G+C
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++   KLF  M   G + + V+YNTLI  + +  DV++A   +S+M   GI P + 
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L  GL +  ++E+AL +F++M++  +  D  TY   I G+CK+G V EA  LF ++
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + +IV+Y  ++ GL
Sbjct: 462 SLKGLKPDIVTYTTMMSGL 480



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 13/382 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL I   ML++   P  V+  +++ G   +N+  D V SL  ++   G  PDI  ++ +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 197

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK  RV+  F     I R    PN VT+T+L+ GLC  SR  +AA L +        
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V TY+ L++   + G  + A  LFEEM        +   P+ VTY+++++GLC    +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVR------MSIDPDIVTYSSLVNGLCLHDRI 311

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A ++F  M  +    DVV+Y ++I GFC A    +  +LF EM  +G+  + VT++ +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    + G +DKA      M + G++P+ +TYN L+ G C   +++ A  +F  M+    
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE---IHQVER 446
             D+V+Y T+I   CK   VEEA SL+  +  KG+KP +VTY T+  GL     +H+VE 
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE- 490

Query: 447 ALKLFDEMRRNHVAADTYTYNN 468
              L+ +M++  +  +  T ++
Sbjct: 491 --ALYTKMKQEGLMKNDCTLSD 510


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/452 (36%), Positives = 246/452 (54%), Gaps = 30/452 (6%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F  ML MHP PPP+  F  L   +AK KHY TVLSL K+++S G+ PD+YT 
Sbjct: 36  TLDDALSSFHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +I+IN FC + RV     VL +IL+    P+  TFT+L++GLC   +I EA  +F K   
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEFGVVCK------ 250
              +P+V TY TL+NGLC+      ALNLF EM A G        N     +C       
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214

Query: 251 --------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
                         PN V+ N ++D LCKEG V +A ++   M    + PDVVTY +++ 
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C  ++ +EA ++F  M+  G   +VV+++ +++  CK  ++DKA  L E M  + + P
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           NT TY+TLI G C   ++  A  LF  M + G + ++V+Y+ L+++ CKN  + EA++L 
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
             +    + P V  YN    G+     +E A  LF  +    +  D +T+N  I GLCK 
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G + EA +LFR + ++    N  +YN +  GL
Sbjct: 455 GLLDEASKLFREMDENGCLRNGCTYNTITQGL 486



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 169/376 (44%), Gaps = 65/376 (17%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +FD M+      P V ++  L   L K++     L+LF  + + G+ PDI+T++ L
Sbjct: 144 EALDVFDKMVG-EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA------------ 196
           I+  C +    H   +L  +++S   PN V+   ++  LC E ++ EA            
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262

Query: 197 -------AALFTKH----------RVF------ACEPDVFTYNTLINGLCRTGHTIVALN 233
                  AAL   H          +VF       C  +V +YNTLING C+      A+ 
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322

Query: 234 LFEEMA---------------NGNGEFG------------VVCK--PNTVTYNTIIDGLC 264
           LFEEM                +G    G            V C   PN VTY+ ++D LC
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K   + +A  L   ++  N++PDV  Y   I G C A D   A+ LF  +  +G+QPDV 
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T ++++  LCK G +D+AS+L   M   G   N  TYNT+  G    +K   A +L   M
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502

Query: 385 ESNGCMHDVVSYNTLI 400
            + G   DV +   L+
Sbjct: 503 LARGFSADVSTTALLV 518



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 7/259 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +FD M+R +     V S+N L     K +  D  + LF+ +    L P+  T+S 
Sbjct: 283 DEAVKVFDMMVR-NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C +GR+     +   ++     PN VT++ L+  LC   R+ EA AL        
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDV  YN  I+G+CR G    A +LF  +A          +P+  T+N +I GLCK G
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG------LQPDVWTHNIMIRGLCKRG 455

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A +LF +M +     +  TY ++ +G    N  + A +L  EM+ +G   DV T +
Sbjct: 456 LLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTA 515

Query: 328 VIMDELCKNGKMDKASRLL 346
           +++  L  +G      ++L
Sbjct: 516 LLVKMLSDDGLDQSVKQIL 534


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 156/438 (35%), Positives = 253/438 (57%), Gaps = 29/438 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  M+R  P P  V  F  L G + +    D V+SL +++    +  + Y+ +IL
Sbjct: 61  DAIDLFGDMVRSRPLPS-VIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTIL 119

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           + CFC   ++       G+I +  F P  VTF++L+ GLC E RI EA  LF  H++  C
Sbjct: 120 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF--HQM--C 175

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P+V T+ TL+NGLCR G  + A+ L + M     E G+  +PN +TY TI+DG+CK G 
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRML----EDGL--QPNQITYGTIVDGMCKMGD 229

Query: 269 VDKAKELFLKMKD-ENINPDVVTY-----TSVIRGFCYANDWNEAKRLFIEMMD-QGVQP 321
              A  L  KM++  +I P+VV +     T +I GFC +  W+EA++L  EM++ + + P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           DVVT++ +++   K GK  +A  L + M+ RG+ P+T TY+++IDG+C  +++D A  +F
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M + GC  D++++NTLI  YC+ K V++ + L  EM   G+    +TY TL  G  ++
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL----- 496
             +  A  L  EM  + V  +  T N  +DGLC +G + +ALE+F+A++ SK ++     
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469

Query: 497 ------NIVSYNCLIDGL 508
                 ++ +YN LI GL
Sbjct: 470 FNGVEPDVQTYNILISGL 487



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 188/356 (52%), Gaps = 17/356 (4%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L + L    + PD+ T++ LIN F K G+      +   +L     P+ +T++S+I G C
Sbjct: 278 LQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC 337

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            ++R+  A  +F       C PD+ T+NTLI G CR       + L  EM     E G+V
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT----EAGLV 393

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              NT+TY T+I G C+ G ++ A++L  +M    + P+VVT  +++ G C      +A 
Sbjct: 394 --ANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451

Query: 309 RLFIEM----MD-------QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            +F  M    MD        GV+PDV T+++++  L   GK  +A  L E M  RG+ P+
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           T TYN++I G C   ++D A ++F SM S     +VV++ TLIN YCK   V++ L L+ 
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           EM  +GI    +TY TL  G  ++  +  AL +F EM  + V  DT T  N + GL
Sbjct: 572 EMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 217/438 (49%), Gaps = 25/438 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYT--- 144
           EA+ + D ML     P  ++   I+ G + K     + L+L +++     + P++     
Sbjct: 197 EAVALLDRMLEDGLQPNQITYGTIVDG-MCKMGDTVSALNLLRKMEEVSHIKPNVVIWPL 255

Query: 145 --HSILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
              + +IN FC  GR S    +L  +L R   +P+ VT+ +LI     E +  EA  L+ 
Sbjct: 256 ERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD 315

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +       P   TY+++I+G C+      A ++F  MA         C P+ +T+NT+I 
Sbjct: 316 EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPDIITFNTLIA 369

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G C+   VD   +L  +M +  +  + +TYT++I GFC   D N A+ L  EM+  GV P
Sbjct: 370 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCP 429

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMI-----------WRGVNPNTYTYNTLIDGYCL 370
           +VVT + ++D LC NGK+  A  + + M            + GV P+  TYN LI G   
Sbjct: 430 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLIN 489

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K   A +L+  M   G + D ++YN++I+  CK   ++EA  ++  M SK   P VVT
Sbjct: 490 EGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVT 549

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           + TL  G  +  +V+  L+LF EM R  + A+  TY   I G  K G +  AL++F+ + 
Sbjct: 550 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMM 609

Query: 491 DSKYELNIVSYNCLIDGL 508
            S    + ++   ++ GL
Sbjct: 610 ASGVYPDTITIRNMLTGL 627



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 196/382 (51%), Gaps = 23/382 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +   ML      P V ++N L     K   +     L+  +   G+ P   T+S 
Sbjct: 272 SEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSS 331

Query: 148 LINCFCKMGRV---SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           +I+ FCK  R+    H F ++    + C +P+ +TF +LI G C   R+ +   L  +  
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMAT--KGC-SPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                 +  TY TLI+G C+ G    A +L +EM +       VC PN VT NT++DGLC
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG-----VC-PNVVTCNTLLDGLC 442

Query: 265 KEGFVDKAKELFLKMKDE-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             G +  A E+F  M+              + PDV TY  +I G      + EA+ L+ E
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G+ PD +T++ ++  LCK  ++D+A+++ + M  +  +PN  T+ TLI+GYC   +
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D   +LF  M   G + + ++Y TLI+ + K  ++  AL ++ EM++ G+ P  +T   
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRN 622

Query: 434 LFLGLFEIHQVERALKLFDEMR 455
           +  GL+   +++RA+ + ++++
Sbjct: 623 MLTGLWSKEELKRAVAMLEDLQ 644



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 10/217 (4%)

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GF       +A  LF +M+     P V+ F  +M  + + G++D    L   M  R V  
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N Y++  L+  +C   K+  A   F  +   G    VV+++TL++  C    + EAL L+
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M     KP VVT+ TL  GL    +V  A+ L D M  + +  +  TY   +DG+CK 
Sbjct: 172 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 477 GFVLEALELFRAIRD-SKYELNIVSY-----NCLIDG 507
           G  + AL L R + + S  + N+V +      C+I+G
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMING 264


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 248/422 (58%), Gaps = 7/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+++L M+   PP+  FN +   L K  H+   +S  +++   G+ P+++T +I
Sbjct: 34  DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCF  + +++  F ++ +IL+  + P+ VT  +L++GLC   ++ EA   F  H +  
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALN-FHDHVIRK 152

Query: 208 -CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               D  +Y TLINGLC++G T  AL L  ++     E  ++ +P+ + Y  IID  CK+
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKI-----EGLLLVRPDVIMYTAIIDSFCKD 207

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V  A +L+ +M  + I P+VVT+ S+I GFC      EA  L  EM    V P+V TF
Sbjct: 208 KLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTF 267

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D LCK G++ KA+ +L +MI +GV PN  TY +L+DGY L  +++ A+ +F ++  
Sbjct: 268 NILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISL 327

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   +V SY+ +IN  CKNK V+EA+ L+ EM  K + P  VTY++L  GL +  ++  
Sbjct: 328 RGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISD 387

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              L DE+      A+  TYN+ ++GLCK+  V +A+ L   ++D   + ++ +Y  L+D
Sbjct: 388 VWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVD 447

Query: 507 GL 508
           GL
Sbjct: 448 GL 449



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 229/451 (50%), Gaps = 42/451 (9%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F   + +    P + +FNIL  C +     +   S+  ++   G  PD  T + L+   C
Sbjct: 75  FSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLC 134

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC--AESR------------------- 192
             G+V         ++R  F  + V++ +LI GLC   E+R                   
Sbjct: 135 LNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDV 194

Query: 193 ---------------IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
                          +++A  L+++  V    P+V T+N+LI G C  G    A+ L  E
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNE 254

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M+  N        PN  T+N +IDGLCKEG V KA  +   M  + + P+VVTYTS++ G
Sbjct: 255 MSLNN------VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDG 308

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +    + N+AK +F  +  +GV P+V ++SV+++ LCKN  +D+A +L + M  + + PN
Sbjct: 309 YFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPN 368

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           T TY++LIDG C + +I     L   + + G   ++++YN+L+N  CKN  V++A++L +
Sbjct: 369 TVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +M  +GI+P + TY TL  GL +  +++ A +++ ++       +   Y   I+GLCK G
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F  EAL L   + D+    + V+Y  LI  L
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISAL 519



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 205/404 (50%), Gaps = 12/404 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSI 147
           EAL   D+++R       VS +  L   L K+      L L +++    L  PD+  ++ 
Sbjct: 141 EALNFHDHVIRKRFHLDQVS-YGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTA 199

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ FCK   V   + +   ++     PN VTF SLI G C   ++ EA  L  +  +  
Sbjct: 200 IIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG--LCK 265
             P+V+T+N LI+GLC+ G    A ++   M     E      PN VTY +++DG  L K
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVE------PNVVTYTSLMDGYFLVK 313

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           E  V+KAK +F  +    + P+V +Y+ +I G C     +EA +LF EM  + + P+ VT
Sbjct: 314 E--VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S ++D LCK+G++     L++ +  RG   N  TYN+L++G C   ++D A  L   M+
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK 431

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   D+ +Y TL++  CKN  +++A  +Y ++L KG    +  Y  +  GL +    +
Sbjct: 432 DEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFD 491

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            AL L  +M  N    D  TY   I  L K+    +A++L R +
Sbjct: 492 EALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 170/318 (53%), Gaps = 6/318 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L             + L   ++   + P++YT +ILI+  CK G V     V
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    PN VT+TSL+ G      + +A  +F    +    P+V +Y+ +INGLC+
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ LF+EM   N        PNTVTY+++IDGLCK G +    +L  ++ +   
Sbjct: 347 NKMVDEAVKLFKEMHLKN------MTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQ 400

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +++TY S++ G C  +  ++A  L  +M D+G+QPD+ T++ ++D LCKNG++  A R
Sbjct: 401 PANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQR 460

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + ++ +G   N   Y  +I+G C     D A  L   ME NGCM D V+Y TLI+   
Sbjct: 461 IYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALF 520

Query: 405 KNKDVEEALSLYSEMLSK 422
           KN    +A+ L  EM+++
Sbjct: 521 KNNKNGKAVKLLREMIAR 538


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 157/373 (42%), Positives = 219/373 (58%), Gaps = 59/373 (15%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           AGL PD++T +IL NC C + RVS                         +GL A + I+ 
Sbjct: 4   AGLSPDLFTLNILANCLCNLNRVS-------------------------EGLAAMTGILR 38

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
              +          PD+ TYNTLI GLCR  H I                       +V 
Sbjct: 39  RGYI----------PDIVTYNTLIKGLCRV-HRI-----------------------SVA 64

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
              IIDGLCK G  D+AKE+F +MK + + P+V++Y+S++ GFC A    E+KRLF EM+
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           DQGVQP++V F+V++D LCK GK+ +A +LLE+ I RG+  +  TYN+LIDG+C    + 
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            ARKLF+SM S GC H+ +SY  LIN YCK   VEEA++LY+EM   G +P V TY+TL 
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +  +V  A KLF  M+ + ++ D+  Y  F+DGLCK+G + EA+ELF  ++   ++
Sbjct: 245 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 304

Query: 496 LNIVSYNCLIDGL 508
           L+  SY+ LIDGL
Sbjct: 305 LDFESYSRLIDGL 317



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 199/405 (49%), Gaps = 26/405 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P + + NIL  CL         L+    +   G  PDI T++ LI   C++ R+S     
Sbjct: 8   PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI 67

Query: 160 --HGFVVLG----------RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
              G   +G           +      PN ++++SL+ G C   ++ E+  LF +     
Sbjct: 68  IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 127

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P++  +N LI+ LC+ G  I A  L E       + G++   + VTYN++IDG CK G
Sbjct: 128 VQPNLVQFNVLIDILCKEGKVIEAKKLLEVTI----QRGIIL--DLVTYNSLIDGFCKIG 181

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A++LFL M  +    + ++YT +I G+C      EA  L+ EM   G +P+V T+S
Sbjct: 182 DLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYS 241

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  L + GK+  A++L  +M   G++ ++  Y   +DG C    +  A +LF  ++S 
Sbjct: 242 TLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSY 301

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D  SY+ LI+  CK   VE A   + ++  +G++P VVT N +  G   + QV++A
Sbjct: 302 NFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA 361

Query: 448 LKLFDEMRR---NHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
             LF++M +   N    D  TYN  + G C+S  + E + L   +
Sbjct: 362 NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 10/338 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  IF+ M      P  +S  +++ G     K  ++   LF  +   G+ P++   ++
Sbjct: 79  DEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESK-RLFNEMVDQGVQPNLVQFNV 137

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G+V     +L   ++     + VT+ SLI G C    +  A  LF       
Sbjct: 138 LIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKG 197

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CE +  +Y  LING C+      A+NL+ EM        V  +PN  TY+T++ GL + G
Sbjct: 198 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ------VGKRPNVKTYSTLLTGLLQTG 251

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A +LF  MK   I+ D   Y   + G C      EA  LF E+     + D  ++S
Sbjct: 252 KVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYS 311

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF---VSM 384
            ++D LCK GK++ A    + +   G+ PN  T N +I G+C  +++D A  LF     M
Sbjct: 312 RLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKM 371

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           E NGC  D+++YNTL+  +C++  +EE ++L  +M  +
Sbjct: 372 EENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 158/437 (36%), Positives = 242/437 (55%), Gaps = 26/437 (5%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+ ++  M  +   P  + SFNIL  C          LS F +L   G  PD+ T +
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCF---------------TPNAVTFTSLIKGLCAES 191
            L++  C   R+S    + G ++ + F               TP  +TF +LI GLC E 
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           R++EAAAL  K        DV TY T++NG+C+ G T  ALNL  +M   +       KP
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKP 294

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           + V Y+ IID LCK+G    A+ LF +M ++ I P+V TY  +I GFC    W++A+RL 
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            +M+++ + PDV+TF+ ++    K GK+ +A +L + M+ R + P+T TYN++I G+C  
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           ++ D A+ +F  M S     DVV++NT+I+ YC+ K V+E + L  E+  +G+     TY
Sbjct: 415 NRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G  E+  +  A  LF EM  + V  DT T N  + G C++  + EALELF  I+ 
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 492 SKYELNIVSYNCLIDGL 508
           SK +L+ V+YN +I G+
Sbjct: 531 SKIDLDTVAYNIIIHGM 547



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 207/430 (48%), Gaps = 49/430 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  FDYM+R  P    V   N + G   +    D  +SL++++    +  +IY+ +I
Sbjct: 88  DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI CFC   ++S      G++ +  F                                  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLF---------EEMANGNGEFGVVCKPNTVTYNT 258
            +PDV T+NTL++GLC       AL LF         E +A  +    +   P  +T+NT
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I+GLC EG V +A  L  KM  + ++ DVVTY +++ G C   D   A  L  +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++PDVV +S I+D LCK+G    A  L   M+ +G+ PN +TYN +IDG+C   +   A+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L   M       DV+++N LI+   K   + EA  L  EML + I P  VTYN++  G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            + ++ + A  +FD M     + D  T+N  ID  C++  V E ++L R I       N 
Sbjct: 412 CKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 499 VSYNCLIDGL 508
            +YN LI G 
Sbjct: 468 TTYNTLIHGF 477



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 14/369 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+ H+     LF  +   G+ P+++T++ +I+ FC  GR S    +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
           L  ++     P+ +TF +LI     E ++ EA  L  +  HR     PD  TYN++I G 
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF--PDTVTYNSMIYGF 411

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A ++F+ MA+          P+ VT+NTIID  C+   VD+  +L  ++   
Sbjct: 412 CKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +  +  TY ++I GFC  ++ N A+ LF EM+  GV PD +T ++++   C+N K+++A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L E++    ++ +T  YN +I G C   K+D A  LF S+  +G   DV +YN +I+ 
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C    + +A  L+ +M   G +P   TYNTL  G  +  +++++++L  EMR N  + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641

Query: 463 TYTYNNFID 471
            +T     D
Sbjct: 642 AFTIKMVAD 650



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 34/435 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +FD M+ +  +P  V +FN L   L          +L  ++   GL  D+ T+  +
Sbjct: 209 EAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N  CKMG       +L ++  +   P+ V ++++I  LC +    +A  LF++      
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK--------- 250
            P+VFTYN +I+G C  G    A  L  +M            N       K         
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P+TVTYN++I G CK    D AK +F    D   +PDVVT+ ++I  +C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 443

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A   +E  +L  E+  +G+  +  T++ ++   C+   ++ A  L + MI  GV P+T 
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           T N L+ G+C  +K++ A +LF  ++ +    D V+YN +I+  CK   V+EA  L+  +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G++P V TYN +  G      +  A  LF +M+ N    D  TYN  I G  K+G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 480 LEALELFRAIRDSKY 494
            +++EL   +R + +
Sbjct: 624 DKSIELISEMRSNGF 638


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 154/436 (35%), Positives = 254/436 (58%), Gaps = 13/436 (2%)

Query: 73  RCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR 132
           R  S+ +  +NL    E + +F  M++  P P  V  F+ +   +AK+K+YD V+SLF  
Sbjct: 39  RTFSTKRSSMNL---EEEIDLFCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHH 94

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +   G+  D+Y+++I+INC C+  R      V+G++++  + P+ VT +SLI G C  +R
Sbjct: 95  MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + +A  L +K       PDV  YNT+I+G C+ G    A+ LF+ M       GV  + +
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RAD 208

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYN+++ GLC  G    A  L   M   +I P+V+T+T+VI  F     ++EA +L+ 
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM  + V PDV T++ +++ LC +G++D+A ++L+LM+ +G  P+  TYNTLI+G+C + 
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           ++D   KLF  M   G + D ++YNT+I  Y +    + A  ++S M S   +P + TY+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYS 385

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  GL    +VE+AL LF+ M+++ +  D  TYN  I G+CK G V +A +LFR++   
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445

Query: 493 KYELNIVSYNCLIDGL 508
             + ++VSY  +I G 
Sbjct: 446 GLKPDVVSYTTMISGF 461



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 45/372 (12%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M++    P  V+  +++ G    N+ +D +  L  ++   G  PD+  ++ +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTII 181

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---------- 199
           +  CK+G V+    +  R+ R     +AVT+ SL+ GLC   R  +AA L          
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241

Query: 200 ------------FTKHRVFA-------------CEPDVFTYNTLINGLCRTGHTIVALNL 234
                       F K   F+              +PDVFTYN+LINGLC  G    A  +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            + M          C P+ VTYNT+I+G CK   VD+  +LF +M    +  D +TY ++
Sbjct: 302 LDLMVTKG------CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I+G+  A   + A+ +F  M     +P++ T+S+++  LC N +++KA  L E M    +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             +  TYN +I G C    ++ A  LF S+   G   DVVSY T+I+ +C+ +  +++  
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472

Query: 415 LYSEMLSKGIKP 426
           LY +M   G+ P
Sbjct: 473 LYRKMQEDGLLP 484



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 5/227 (2%)

Query: 285 NPDVVTYTSVIRGFCYAN-----DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           NP +V + S   G  ++      +  E   LF +M+     P +V FS ++ ++ K+   
Sbjct: 26  NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D    L   M   G+  + Y+YN +I+  C   +   A  +   M   G   DVV+ ++L
Sbjct: 86  DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           IN +C+   V +A+ L S+M   G +P VV YNT+  G  +I  V  A++LFD M R+ V
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            AD  TYN+ + GLC SG   +A  L R +       N++++  +ID
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 157/432 (36%), Positives = 241/432 (55%), Gaps = 21/432 (4%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+ ++  M  +   P  + SFNIL  C          LS F +L   G  PD+ T +
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSC----------FTPNAVTFTSLIKGLCAESRIMEA 196
            L++  C   R+S    + G ++ +            TP  +TF +LI GLC E R++EA
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 240

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
           AAL  K        DV TY T++NG+C+ G T  ALNL  +M   +       KP+ V Y
Sbjct: 241 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIY 294

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + IID LCK+G    A+ LF +M ++ I P+V TY  +I GFC    W++A+RL  +M++
Sbjct: 295 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 354

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + + PDV+TF+ ++    K GK+ +A +L + M+ R + P+T TYN++I G+C  ++ D 
Sbjct: 355 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 414

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+ +F  M S     DVV++NT+I+ YC+ K V+E + L  E+  +G+     TYNTL  
Sbjct: 415 AKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 470

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  E+  +  A  LF EM  + V  DT T N  + G C++  + EALELF  I+ SK +L
Sbjct: 471 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 530

Query: 497 NIVSYNCLIDGL 508
           + V+YN +I G+
Sbjct: 531 DTVAYNIIIHGM 542



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 206/425 (48%), Gaps = 44/425 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  FDYM+R  P    V   N + G   +    D  +SL++++    +  +IY+ +I
Sbjct: 88  DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI CFC   ++S      G++ +  F                                  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK----PNTVTYNTIIDGL 263
            +PDV T+NTL++GLC       AL LF  M      F  + +    P  +T+NT+I+GL
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C EG V +A  L  KM  + ++ DVVTY +++ G C   D   A  L  +M +  ++PDV
Sbjct: 232 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 291

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V +S I+D LCK+G    A  L   M+ +G+ PN +TYN +IDG+C   +   A++L   
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M       DV+++N LI+   K   + EA  L  EML + I P  VTYN++  G  + ++
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            + A  +FD M     + D  T+N  ID  C++  V E ++L R I       N  +YN 
Sbjct: 412 FDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 504 LIDGL 508
           LI G 
Sbjct: 468 LIHGF 472



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 14/369 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+ H+     LF  +   G+ P+++T++ +I+ FC  GR S    +
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
           L  ++     P+ +TF +LI     E ++ EA  L  +  HR     PD  TYN++I G 
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF--PDTVTYNSMIYGF 406

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A ++F+ MA+          P+ VT+NTIID  C+   VD+  +L  ++   
Sbjct: 407 CKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +  +  TY ++I GFC  ++ N A+ LF EM+  GV PD +T ++++   C+N K+++A
Sbjct: 457 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 516

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L E++    ++ +T  YN +I G C   K+D A  LF S+  +G   DV +YN +I+ 
Sbjct: 517 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 576

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C    + +A  L+ +M   G +P   TYNTL  G  +  +++++++L  EMR N  + D
Sbjct: 577 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 636

Query: 463 TYTYNNFID 471
            +T     D
Sbjct: 637 AFTIKMVAD 645



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 207/445 (46%), Gaps = 42/445 (9%)

Query: 88  NEALCIFDYMLRMHPS---------PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +EAL +F YM+               P V +FN L   L          +L  ++   GL
Sbjct: 193 SEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 252

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             D+ T+  ++N  CKMG       +L ++  +   P+ V ++++I  LC +    +A  
Sbjct: 253 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 312

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVC 249
           LF++       P+VFTYN +I+G C  G    A  L  +M            N       
Sbjct: 313 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 372

Query: 250 K--------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           K                    P+TVTYN++I G CK    D AK +F    D   +PDVV
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVV 428

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T+ ++I  +C A   +E  +L  E+  +G+  +  T++ ++   C+   ++ A  L + M
Sbjct: 429 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  GV P+T T N L+ G+C  +K++ A +LF  ++ +    D V+YN +I+  CK   V
Sbjct: 489 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 548

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           +EA  L+  +   G++P V TYN +  G      +  A  LF +M+ N    D  TYN  
Sbjct: 549 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 608

Query: 470 IDGLCKSGFVLEALELFRAIRDSKY 494
           I G  K+G + +++EL   +R + +
Sbjct: 609 IRGCLKAGEIDKSIELISEMRSNGF 633


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 158/437 (36%), Positives = 242/437 (55%), Gaps = 26/437 (5%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+ ++  M  +   P  + SFNIL  C          LS F +L   G  PD+ T +
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCF---------------TPNAVTFTSLIKGLCAES 191
            L++  C   R+S    + G ++ + F               TP  +TF +LI GLC E 
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           R++EAAAL  K        DV TY T++NG+C+ G T  ALNL  +M   +       KP
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKP 294

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           + V Y+ IID LCK+G    A+ LF +M ++ I P+V TY  +I GFC    W++A+RL 
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            +M+++ + PDV+TF+ ++    K GK+ +A +L + M+ R + P+T TYN++I G+C  
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           ++ D A+ +F  M S     DVV++NT+I+ YC+ K V+E + L  E+  +G+     TY
Sbjct: 415 NRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G  E+  +  A  LF EM  + V  DT T N  + G C++  + EALELF  I+ 
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 492 SKYELNIVSYNCLIDGL 508
           SK +L+ V+YN +I G+
Sbjct: 531 SKIDLDTVAYNIIIHGM 547



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 203/388 (52%), Gaps = 15/388 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M   H  P  V  ++ +   L K+ H+     LF  +   G+ P+++T++ +I
Sbjct: 280 ALNLLSKMEETHIKPD-VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFA 207
           + FC  GR S    +L  ++     P+ +TF +LI     E ++ EA  L  +  HR   
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  TYN++I G C+      A ++F+ MA+          P+ VT+NTIID  C+  
Sbjct: 399 --PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAK 446

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+  +L  ++    +  +  TY ++I GFC  ++ N A+ LF EM+  GV PD +T +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++   C+N K+++A  L E++    ++ +T  YN +I G C   K+D A  LF S+  +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV +YN +I+ +C    + +A  L+ +M   G +P   TYNTL  G  +  +++++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           ++L  EMR N  + D +T     + +C+
Sbjct: 627 IELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 207/430 (48%), Gaps = 49/430 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  FDYM+R  P    V   N + G   +    D  +SL++++    +  +IY+ +I
Sbjct: 88  DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI CFC   ++S      G++ +  F                                  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLF---------EEMANGNGEFGVVCKPNTVTYNT 258
            +PDV T+NTL++GLC       AL LF         E +A  +    +   P  +T+NT
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I+GLC EG V +A  L  KM  + ++ DVVTY +++ G C   D   A  L  +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++PDVV +S I+D LCK+G    A  L   M+ +G+ PN +TYN +IDG+C   +   A+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L   M       DV+++N LI+   K   + EA  L  EML + I P  VTYN++  G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            + ++ + A  +FD M     + D  T+N  ID  C++  V E ++L R I       N 
Sbjct: 412 CKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 499 VSYNCLIDGL 508
            +YN LI G 
Sbjct: 468 TTYNTLIHGF 477



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 34/435 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +FD M+ +  +P  V +FN L   L          +L  ++   GL  D+ T+  +
Sbjct: 209 EAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N  CKMG       +L ++  +   P+ V ++++I  LC +    +A  LF++      
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK--------- 250
            P+VFTYN +I+G C  G    A  L  +M            N       K         
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P+TVTYN++I G CK    D AK +F    D   +PDVVT+ ++I  +C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 443

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A   +E  +L  E+  +G+  +  T++ ++   C+   ++ A  L + MI  GV P+T 
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           T N L+ G+C  +K++ A +LF  ++ +    D V+YN +I+  CK   V+EA  L+  +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G++P V TYN +  G      +  A  LF +M+ N    D  TYN  I G  K+G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623

Query: 480 LEALELFRAIRDSKY 494
            +++EL   +R + +
Sbjct: 624 DKSIELISEMRSNGF 638



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 142/309 (45%), Gaps = 16/309 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR---VSHG 161
           P V +FN L     K         L   +    +FPD  T++ +I  FCK  R     H 
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F ++        +P+ VTF ++I   C   R+ E   L  +        +  TYNTLI+G
Sbjct: 424 FDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C   +   A +LF+EM +       VC P+T+T N ++ G C+   +++A ELF  ++ 
Sbjct: 477 FCEVDNLNAAQDLFQEMISHG-----VC-PDTITCNILLYGFCENEKLEEALELFEVIQM 530

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             I+ D V Y  +I G C  +  +EA  LF  +   GV+PDV T++V++   C    +  
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A+ L   M   G  P+  TYNTLI G     +ID + +L   M SNG   D  +      
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEE 650

Query: 402 WYCKNKDVE 410
             C+  D E
Sbjct: 651 IICRVSDEE 659


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/420 (38%), Positives = 235/420 (55%), Gaps = 41/420 (9%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL-FPDIYTHSILINCF 152
           F  ML ++P P  +  FN+LFG +AK++H+ T +SL K L+S G    D+ T +ILINC 
Sbjct: 64  FHRMLTLNPFPC-IQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCL 122

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++ + + GF VLG + +    P  VT  ++  GLC                        
Sbjct: 123 CRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLC------------------------ 158

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
                ++NGLC+ G T  AL   ++M   N E      PN V YN I+DGLCK G V +A
Sbjct: 159 -----IVNGLCKIGDTSGALESLKKMVKRNLE------PNVVVYNAILDGLCKRGLVGEA 207

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFC-YANDWNEAKRLFIEMM-DQGVQPDVVTFSVIM 330
             LF +M   N+ P+VVTY  +I+G C     W E   LF EM+ ++G+ PDV TFS+++
Sbjct: 208 LGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILV 267

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNG 388
           +  CK G + +A  ++  MI  GV  N  TYN+LI GYCL ++++ A ++F  M  E  G
Sbjct: 268 NGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEG 327

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C+  VV+YN+LI+ +CK K V +A+SL SEM+ KG+ P V T+ +L  G FE+ +   A 
Sbjct: 328 CLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAK 387

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +LF  M+         T    +DGL K     EA+ LFRA+  S  +L+IV YN ++DG+
Sbjct: 388 ELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGM 447



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 172/369 (46%), Gaps = 8/369 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC-KMGRVSHGFV 163
           P V  +N +   L K       L LF  +    + P++ T++ LI   C ++G    G  
Sbjct: 186 PNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVG 245

Query: 164 VLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           +   ++      P+  TF+ L+ G C E  ++ A ++         E +V TYN+LI+G 
Sbjct: 246 LFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGY 305

Query: 223 CRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           C       A+ +F+ M   G G     C P+ VTYN++I G CK   V+KA  L  +M  
Sbjct: 306 CLRNRMEEAVRVFDLMVREGEG-----CLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVG 360

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + ++PDV T+TS+I GF        AK LFI M DQG  P + T +V++D L K     +
Sbjct: 361 KGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSE 420

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L   M   G++ +   YN ++DG C   K++ ARKL   +   G   D  ++N +I 
Sbjct: 421 AMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIK 480

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+   +++A  L  +M   G  P   +YN    GL   + + R+ K    M+      
Sbjct: 481 GLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPV 540

Query: 462 DTYTYNNFI 470
           D  T    I
Sbjct: 541 DATTAELLI 549



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 162/360 (45%), Gaps = 46/360 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILF-GCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTH 145
            EAL +F Y + +    P V ++N L  G   +   +   + LF  + +  G+ PD+ T 
Sbjct: 205 GEALGLF-YEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTF 263

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--TKH 203
           SIL+N FCK G +     ++G ++R     N VT+ SLI G C  +R+ EA  +F     
Sbjct: 264 SILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVR 323

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C P V TYN+LI+G C+      A++L  EM  G G       P+  T+ ++I G 
Sbjct: 324 EGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMV-GKG-----LDPDVFTWTSLIGGF 377

Query: 264 CKEGFVDKAKELFLKMKDENINP-----------------------------------DV 288
            + G    AKELF+ MKD+   P                                   D+
Sbjct: 378 FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI 437

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V Y  ++ G C     N+A++L   ++ +G++ D  T+++++  LC+ G +D A  LL  
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G  PN  +YN  + G      I  +RK    M+  G   D  +   LI +   N++
Sbjct: 498 MKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 557



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 9/262 (3%)

Query: 89  EALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           EA+ +FD M+R      P V ++N L     K K  +  +SL   +   GL PD++T + 
Sbjct: 313 EAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTS 372

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  F ++G+      +   +      P   T   ++ GL       EA  LF       
Sbjct: 373 LIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSG 432

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            + D+  YN +++G+C+ G    A  L    +  G        K ++ T+N +I GLC+E
Sbjct: 433 LDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKG-------LKIDSYTWNIMIKGLCRE 485

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D A+EL  KMK+    P+  +Y   ++G     D + +++    M D+G   D  T 
Sbjct: 486 GLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTA 545

Query: 327 SVIMDELCKNGKMDKASRLLEL 348
            +++  L  N + +     L++
Sbjct: 546 ELLIRFLSANEEDNAFQEFLQI 567


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 246/421 (58%), Gaps = 10/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F  M++  P P  V  F+ L   +AK+K+YD V+SLF  +   G+  D+YT++I
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVE-FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +INC C+  R      V+G++++  + P+ VT +SLI G C  +R+  A  L +K     
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+ DV  YNT+I+G C+TG    AL LF  M       GV  + +TVTYN+++ GLC  G
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERD----GV--RADTVTYNSLVTGLCCSG 223

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A  L   M   +I P+V+T+T++I  F     + EAK+ + EM+ + + PDV T++
Sbjct: 224 RRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYN 283

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC +G++D+A ++L+LM+ +G  P+  TYNTLI+G+C T ++D   KL   M   
Sbjct: 284 SMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D V++NT+I  Y +    + A  ++S M   G +P + TY+ L  GL    +VE+A
Sbjct: 344 GLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKA 400

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L LF+ M+++ +  D  TYN  I G+C  G V +A +LF ++     E ++V+Y  +I G
Sbjct: 401 LVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISG 460

Query: 508 L 508
            
Sbjct: 461 F 461



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 165/320 (51%), Gaps = 9/320 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N +     K    +  L LF R+   G+  D  T++ L+   C  GR S    ++ 
Sbjct: 174 VVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMR 233

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     PN +TFT+LI     E + +EA   + +      +PDVFTYN++I+GLC  G
Sbjct: 234 DMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHG 293

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  + + M          C P+ VTYNT+I+G CK   VD+  +L  +M    +  
Sbjct: 294 QVDEAKQILDLMVTKG------CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VT+ ++I+G+  A   + A+ +F  M   G +P++ T+S+++  LC N +++KA  L 
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLF 404

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M    +  +  TYN +I G C+   ++ A  LF S+   G   DVV+Y T+I+ +C+ 
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464

Query: 407 KDVEEALSLYSEMLSKGIKP 426
           +  ++A  LY +M   G+ P
Sbjct: 465 RLWDKADFLYRKMQEDGLLP 484



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 35/275 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A +LF  M      P +V ++ ++     + +++    LF  M   G+  D+ T+++
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LC+  +   A  ++  M+  G  P+  T ++LI+G+C  +++  A  L   ME   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL---------- 438
           C  DVV YNT+I+ +CK   V  AL L+  M   G++   VTYN+L  GL          
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 439 -------------------------FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
                                        +   A K ++EM R  +  D +TYN+ I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C  G V EA ++   +       ++V+YN LI+G 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGF 324



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 5/173 (2%)

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK-----IDHARKLFVSMESNGCMHDVVS 395
           KA + L L +    N  T  + +   G   T K     +D A  LF +M  +  +  +V 
Sbjct: 12  KAKKFLNLCLLEKGNRVTAPFISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVE 71

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           ++ L++   K+K+ +  +SL+  M   GI   + TYN +   L    +   AL +  +M 
Sbjct: 72  FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +     D  T ++ I+G C+   V  A++L   + + + +L++V YN +IDG 
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGF 184


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/412 (35%), Positives = 243/412 (58%), Gaps = 10/412 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M++  P P  V  F+ +   +AK+K+YD V+SLF  +   G+  D+Y+++I+INC C+  
Sbjct: 1   MIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 59

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           R      V+G++++  + P+ VT +SLI G C  +R+ +A  L +K       PDV  YN
Sbjct: 60  RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 119

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           T+I+G C+ G    A+ LF+ M       GV  + + VTYN+++ GLC  G    A  L 
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLM 173

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M   +I P+V+T+T+VI  F     ++EA +L+ EM  + V PDV T++ +++ LC +
Sbjct: 174 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 233

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++D+A ++L+LM+ +G  P+  TYNTLI+G+C + ++D   KLF  M   G + D ++Y
Sbjct: 234 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 293

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           NT+I  Y +    + A  ++S M S   +P + TY+ L  GL    +VE+AL LF+ M++
Sbjct: 294 NTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQK 350

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  D  TYN  I G+CK G V +A +LFR++     + ++VSY  +I G 
Sbjct: 351 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 45/372 (12%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M++    P  V+  +++ G    N+ +D +  L  ++   G  PD+  ++ +I
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTII 122

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---------- 199
           +  CK+G V+    +  R+ R     +AVT+ SL+ GLC   R  +AA L          
Sbjct: 123 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 182

Query: 200 ------------FTKHRVFA-------------CEPDVFTYNTLINGLCRTGHTIVALNL 234
                       F K   F+              +PDVFTYN+LINGLC  G    A  +
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 242

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            + M          C P+ VTYNT+I+G CK   VD+  +LF +M    +  D +TY ++
Sbjct: 243 LDLMVTKG------CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I+G+  A   + A+ +F  M     +P++ T+S+++  LC N +++KA  L E M    +
Sbjct: 297 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             +  TYN +I G C    ++ A  LF S+   G   DVVSY T+I+ +C+ +  +++  
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 413

Query: 415 LYSEMLSKGIKP 426
           LY +M   G+ P
Sbjct: 414 LYRKMQEDGLLP 425


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 230/415 (55%), Gaps = 20/415 (4%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  + SFNIL  C          LS F +L   G  P + T + L++  C   RVS    
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  ++ +    PN VTFT+L+ GLC E R++EA AL  +      +P+  TY T+++G+C
Sbjct: 72  LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T+ ALNL  +M     E   + KP+ V Y+ IIDGL K+G    A+ LF++M+D+ 
Sbjct: 128 KMGDTVSALNLLRKME----ELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD+VTY+ +I GFC +  W+EA+RL  EM+ + + PDVVTFS +++ L K G ++ A 
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES-----------NGCMHD 392
            LL+ MI  GV PN  T NTL+DG C + K+  A ++F +M+            NG   D
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V +YN LI+         EA  LY EM  +GI P  VTY+++  GL +  +++ A ++FD
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            M     + +  T+N  I G CK+G V + LELF  +       N ++Y  LI G
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 198/379 (52%), Gaps = 19/379 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSI 147
           EA+ + D M+     P  ++   I+ G + K     + L+L +++   + + PD+  +S 
Sbjct: 99  EAVALLDRMVEDGLQPNQITYGTIVDG-MCKMGDTVSALNLLRKMEELSHIKPDVVIYSA 157

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+   K GR +    +   +      P+ VT++ +I G C+  +  EA  L  +  V  
Sbjct: 158 IIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK 217

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV T++ LIN L + G    A +L +EM +       VC PN VT NT++DGLC  G
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG-----VC-PNVVTCNTLLDGLCDSG 271

Query: 268 FVDKAKELFLKMKDE-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            +  A E+F  M+              + PDV TY  +I G      + EA+ L+ EM  
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G+ PD VT+S +++ LCK  ++D+A+++ + M  +  +PN  T+NTLI GYC    +D 
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             +LF  M   G + + ++Y TLI  + K  ++  +L ++ EM+S G+ P  +T   +  
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451

Query: 437 GLFEIHQVERALKLFDEMR 455
           GL+   ++++AL + +E++
Sbjct: 452 GLWSKEELKKALAMLEELQ 470



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 155/318 (48%), Gaps = 52/318 (16%)

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M+N N + G+    +  ++N +I   C    +  A   F K+     +P +VT+ +++ G
Sbjct: 1   MSN-NIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHG 59

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C  +  +EA  LF +M     +P+VVTF+ +M+ LC+ G++ +A  LL+ M+  G+ PN
Sbjct: 60  LCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN 115

Query: 358 TYTYNTLIDGYC----------LTDKIDH--------------------------ARKLF 381
             TY T++DG C          L  K++                           A+ LF
Sbjct: 116 QITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF 175

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M+  G   D+V+Y+ +IN +C +    EA  L  EML + I P VVT++ L   L + 
Sbjct: 176 IEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL----- 496
             +  A  L  EM  + V  +  T N  +DGLC SG + +ALE+F+A++ S  ++     
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295

Query: 497 ------NIVSYNCLIDGL 508
                 ++ +YN LI GL
Sbjct: 296 FNGVEPDVQTYNILISGL 313


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 230/415 (55%), Gaps = 20/415 (4%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  + SFNIL  C          LS F +L   G  P + T + L++  C   RVS    
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  ++ +    PN VTFT+L+ GLC E R++EA AL  +      +P+  TY T+++G+C
Sbjct: 72  LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T+ ALNL  +M     E   + KP+ V Y+ IIDGL K+G    A+ LF++M+D+ 
Sbjct: 128 KMGDTVSALNLLRKME----ELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD+VTY+ +I GFC +  W+EA+RL  EM+ + + PDVVTFS +++ L K G ++ A 
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES-----------NGCMHD 392
            LL+ MI  GV PN  T NTL+DG C + K+  A ++F +M+            NG   D
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V +YN LI+         EA  LY EM  +GI P  VTY+++  GL +  +++ A ++FD
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            M     + +  T+N  I G CK+G V + LELF  +       N ++Y  LI G
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 198/379 (52%), Gaps = 19/379 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSI 147
           EA+ + D M+     P  ++   I+ G + K     + L+L +++   + + PD+  +S 
Sbjct: 99  EAVALLDRMVEDGLQPNQITYGTIVDG-MCKMGDTVSALNLLRKMEELSHIKPDVVIYSA 157

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+   K GR +    +   +      P+ VT++ +I G C+  +  EA  L  +  V  
Sbjct: 158 IIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRK 217

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV T++ LIN L + G    A +L +EM +       VC PN VT NT++DGLC  G
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG-----VC-PNVVTCNTLLDGLCDSG 271

Query: 268 FVDKAKELFLKMKDE-----------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            +  A E+F  M+              + PDV TY  +I G      + EA+ L+ EM  
Sbjct: 272 KLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 331

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G+ PD VT+S +++ LCK  ++D+A+++ + M  +  +PN  T+NTLI GYC    +D 
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             +LF  M   G + + ++Y TLI  + K  ++  +L ++ EM+S G+ P  +T   +  
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451

Query: 437 GLFEIHQVERALKLFDEMR 455
           GL+   +++RAL + +E++
Sbjct: 452 GLWSKEELKRALAMLEELQ 470



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 155/318 (48%), Gaps = 52/318 (16%)

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M+N N + G+    +  ++N +I   C    +  A   F K+     +P +VT+ +++ G
Sbjct: 1   MSN-NIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHG 59

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C  +  +EA  LF +M     +P+VVTF+ +M+ LC+ G++ +A  LL+ M+  G+ PN
Sbjct: 60  LCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN 115

Query: 358 TYTYNTLIDGYC----------LTDKIDH--------------------------ARKLF 381
             TY T++DG C          L  K++                           A+ LF
Sbjct: 116 QITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLF 175

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M+  G   D+V+Y+ +IN +C +    EA  L  EML + I P VVT++ L   L + 
Sbjct: 176 IEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKE 235

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL----- 496
             +  A  L  EM  + V  +  T N  +DGLC SG + +ALE+F+A++ S  ++     
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295

Query: 497 ------NIVSYNCLIDGL 508
                 ++ +YN LI GL
Sbjct: 296 FNGVEPDVQTYNILISGL 313


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 152/422 (36%), Positives = 238/422 (56%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M++  P P  V  F+ L   +AK   +D V+SL +++ + G+  ++YT+SI
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            IN FC+  ++S    +LG++++  + P+ VT  SL+ G C  +RI EA AL  +     
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD  T+ TL++GL +      A+ L E M          C+P+ VTY  +I+GLCK G
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRG 229

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D A  L  KM+   I  DVV Y ++I G C     ++A  LF +M  +G++PDV T++
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ES 386
            ++  LC  G+   ASRLL  M+ + +NP+   +N LID +    K+  A KL+  M +S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C  DVV+YNTLI  +CK K VEE + ++ EM  +G+    VTY TL  G F+    + 
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  +F +M  + V  D  TYN  +DGLC +G V  AL +F  ++    +L+IV+Y  +I+
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469

Query: 507 GL 508
            L
Sbjct: 470 AL 471



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 172/330 (52%), Gaps = 13/330 (3%)

Query: 182 SLIKGLCAESRIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           +L + +  + ++ +A  LF    K R F   P +  ++ L++ + +     + ++L E+M
Sbjct: 45  NLSRKVLQDLKLDDAIGLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQM 101

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            N     G+    N  TY+  I+  C+   +  A  +  KM      P +VT  S++ GF
Sbjct: 102 QN----LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C+ N  +EA  L  +M++ G QPD VTF+ ++  L ++ K  +A  L+E M+ +G  P+ 
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY  +I+G C   + D A  L   ME      DVV YNT+I+  CK K +++A  L+++
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M +KGIKP V TYN L   L    +   A +L  +M   ++  D   +N  ID   K G 
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335

Query: 479 VLEALELFRAIRDSKYEL-NIVSYNCLIDG 507
           ++EA +L+  +  SK+   ++V+YN LI G
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 35/206 (16%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+D A  L   M+     P+   ++ L+      +K D    L   M++ G  H++ +Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 398 TLINWYCKNKD-----------------------------------VEEALSLYSEMLSK 422
             IN++C+                                      + EA++L  +M+  
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G +P  VT+ TL  GLF+ ++   A+ L + M       D  TY   I+GLCK G    A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           L L   +   K E ++V YN +IDGL
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGL 260


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 145/421 (34%), Positives = 242/421 (57%), Gaps = 9/421 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + + M+ M   PP V S+  +   L K    D    +  ++   G  P++ T+  L+
Sbjct: 98  ALWLLEQMV-MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 156

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFAC 208
           + FC++G +     ++ ++    + PNA+T+ +++ GLC+  ++  A  LF +     +C
Sbjct: 157 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC 216

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFTY+T+++ L ++G    A  L E M +        C PN VTY++++ GLCK G 
Sbjct: 217 PPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG------CSPNVVTYSSLLHGLCKAGK 270

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A  L  +M     +P++VTY ++I G C     +EA  L  EM+D G QP+VVT++V
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK GK + A  L+E+M+ +G  PN +TYN+L+D +C  D+++ A +L  SM   G
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C+ +VVSYNT+I   CK   V E + L  +MLS    P +VT+NT+   + + ++V+ A 
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDG 507
           +LF+ ++ +    +  TYN+ + GLCKS    +A  L R + R      +I++YN +IDG
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 510

Query: 508 L 508
           L
Sbjct: 511 L 511



 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 148/442 (33%), Positives = 238/442 (53%), Gaps = 44/442 (9%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   ++N +   L+K+   D  + L + +   G  P++++++ +++ FCK  RV +   
Sbjct: 41  PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 100

Query: 164 VLGR-ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           +L + ++R C  P+ V++T++I GLC   ++ EA  +  K     C+P+V TY TL++G 
Sbjct: 101 LLEQMVMRGC-PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A+ L  +M     E G   +PN +TYN I+ GLC    +D A +LF +M++ 
Sbjct: 160 CRVGDLDGAVELVRKMT----ERGY--RPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213

Query: 283 -NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            +  PDV TY++++     +   ++A RL   M+ +G  P+VVT+S ++  LCK GK+D+
Sbjct: 214 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDE 273

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY----- 396
           A+ LL+ M   G +PN  TYNT+IDG+C   +ID A  L   M   GC  +VV+Y     
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 333

Query: 397 ------------------------------NTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                                         N+L++ +CK  +VE A  L S M+ KG  P
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            VV+YNT+  GL +  +V   + L ++M  N+   D  T+N  ID +CK+  V  A ELF
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 453

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             I++S    N+V+YN L+ GL
Sbjct: 454 NLIQESGCTPNLVTYNSLVHGL 475



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 224/422 (53%), Gaps = 7/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL +F  M      PP V +++ +   L K+   D    L + + S G  P++ T+S 
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSS 260

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK G++     +L R+ RS  +PN VT+ ++I G C   RI EA  L  +     
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+V TY  L++  C+ G    A+ L E M     E G V  PN  TYN+++D  CK+ 
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV----EKGYV--PNLFTYNSLLDMFCKKD 374

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A +L   M  +   P+VV+Y +VI G C A   +E   L  +M+     PD+VTF+
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ES 386
            I+D +CK  ++D A  L  L+   G  PN  TYN+L+ G C + + D A  L   M   
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  D+++YNT+I+  CK+K V+ A  L+ +MLS G+ P  VTY+ +   L +   ++ 
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 554

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  + + M +N       TY   IDG CK+G + +ALE+ + +       ++V+++  ID
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 614

Query: 507 GL 508
            L
Sbjct: 615 WL 616



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 215/395 (54%), Gaps = 8/395 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L     K    +  + L + +   G  P+++T++ L++ FCK   V     +
Sbjct: 323 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 382

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    PN V++ ++I GLC  +++ E   L  +     C PD+ T+NT+I+ +C+
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDEN 283
           T    +A  LF  +          C PN VTYN+++ GLCK    D+A+ L  +M + + 
Sbjct: 443 TYRVDIAYELFNLIQESG------CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 496

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +PD++TY +VI G C +   + A +LF++M+  G+ PD VT+S+++  LCK   MD+A+
Sbjct: 497 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 556

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +LELM+  G +P   TY TLIDG+C T  +D A ++   + S G   DVV+++  I+W 
Sbjct: 557 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 616

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K   + +A  L   ML  G+ P  VTYNTL  G  +  + E A+ LF+ MR+     D 
Sbjct: 617 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDN 676

Query: 464 YTYNNFIDGLCKSGFVLEAL-ELFRAIRDSKYELN 497
            TY   +  L       + L E+ +++ D+ ++LN
Sbjct: 677 ATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 222/422 (52%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +   M R   SP  V+ +N +     K    D    L + +   G  P++ T+++
Sbjct: 272 DEATALLQRMTRSGCSPNIVT-YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G+      ++  ++   + PN  T+ SL+   C +  +  A  L +      
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+V +YNT+I GLC+       + L E+M + N      C P+ VT+NTIID +CK  
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN------CVPDIVTFNTIIDAMCKTY 444

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQPDVVTF 326
            VD A ELF  +++    P++VTY S++ G C +  +++A+ L  EM   QG  PD++T+
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LCK+ ++D+A +L   M+  G+ P+  TY+ +I   C    +D A  +   M  
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NG     ++Y TLI+ +CK  ++++AL +   +LSKG  P VVT++     L +  ++ +
Sbjct: 565 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 624

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +L + M R  +  DT TYN  + G C +    +A++LF  +R    E +  +Y  L+ 
Sbjct: 625 AGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG 684

Query: 507 GL 508
            L
Sbjct: 685 HL 686



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 187/339 (55%), Gaps = 8/339 (2%)

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R     +A    S+++GLC   +  +A   F +     C PD  TYNT+INGL ++    
Sbjct: 3   RKGLKAHAGVHKSILRGLCDAGQCSDAVLHF-REMSKTCPPDSVTYNTMINGLSKSDRLD 61

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A+ L EEM + NG F     PN  +YNT++ G CK   V+ A  L  +M      PDVV
Sbjct: 62  DAIRLLEEMVD-NG-FA----PNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVV 115

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +YT+VI G C  +  +EA R+  +M+ +G QP+V+T+  ++D  C+ G +D A  L+  M
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVVSYNTLINWYCKNKD 408
             RG  PN  TYN ++ G C   K+D A +LF  ME +G C  DV +Y+T+++   K+  
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V++A  L   M+SKG  P VVTY++L  GL +  +++ A  L   M R+  + +  TYN 
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            IDG CK G + EA  L   + D   + N+V+Y  L+D 
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 106/195 (54%), Gaps = 1/195 (0%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G++        I+  LC  G+   A      M  +   P++ TYNT+I+G   +D+
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A +L   M  NG   +V SYNT+++ +CK   VE AL L  +M+ +G  P VV+Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL ++ QV+ A ++ D+M +     +  TY   +DG C+ G +  A+EL R + +  
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 494 YELNIVSYNCLIDGL 508
           Y  N ++YN ++ GL
Sbjct: 180 YRPNAITYNNIMHGL 194


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 153/432 (35%), Positives = 236/432 (54%), Gaps = 17/432 (3%)

Query: 88  NEALCIFDYML--RMHP----SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
             A+ +F  ML  R H       P V ++++L   L K       + L + + + G  PD
Sbjct: 166 ERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 225

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + T++IL++  CK  +V+  + VL  +L +   PN VT+ SL+ GLC   R+ +A AL  
Sbjct: 226 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 285

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                 C P+V TY TLI+GLC+ G    A  +  +M +  G       P+ + YN +I+
Sbjct: 286 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG------TPDLMIYNMLIN 339

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLCK   VD++  L  +     I PDVVTY+SVI G C +N  +EA RL + +  +G  P
Sbjct: 340 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 399

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           DV+ +S ++D LCK GK+D+A  L E+M   G + +  TY+TLIDG C   ++D A  L 
Sbjct: 400 DVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 459

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M   G     ++YN+LI   C    ++EA+ L  EM      P+ VTYN L  G+  +
Sbjct: 460 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 519

Query: 442 HQVERALKLFDEMRRNHVAA-----DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            +V+ A+ L ++ +   VAA     DT  Y++ IDGLCK+G V EAL+ F+ + D+    
Sbjct: 520 ERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIP 579

Query: 497 NIVSYNCLIDGL 508
           + ++Y+ L++GL
Sbjct: 580 DHITYSILLEGL 591



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/434 (34%), Positives = 238/434 (54%), Gaps = 19/434 (4%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-------NSAGLF 139
           P+ A  +F++M  +  SP  V+ +N L   L +    +  ++LF+ +             
Sbjct: 130 PDRAQELFEHMKSVECSPSMVT-YNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T+S+LI+  CK  RVS    +L  +     +P+ +T+T L+ GLC ES++  A  +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C P++ TYN+L++GLCR      AL L  +M          C PN VTY T+
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTYGTL 302

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLCK G V  A  +   M D+   PD++ Y  +I G C A+  +E+  L    +  G+
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +PDVVT+S ++  LC++ ++D+A RLL  +  RG  P+   Y+TLIDG C   K+D A  
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L+  M  +GC  DVV+Y+TLI+  CK   V+EA  L + M+  G  P+ +TYN+L  GL 
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-----RAIRDSKY 494
           +++ ++ A++L +EM R++ A    TYN  I G+C+   V  A+ L      R +     
Sbjct: 483 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGT 542

Query: 495 ELNIVSYNCLIDGL 508
            L+ ++Y+ LIDGL
Sbjct: 543 ALDTIAYSSLIDGL 556



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 222/422 (52%), Gaps = 2/422 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A   FD M R     P V   +IL   L K K     L  F+ +  +G+  D   ++ 
Sbjct: 26  DQAQRCFDEM-RSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTA 84

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   K  R+     +L  +      PN VT+ SLI GLC  +    A  LF   +   
Sbjct: 85  LLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVE 144

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-EFGVVCKPNTVTYNTIIDGLCKE 266
           C P + TYNTL++GL RTG    A+ LF+EM +    +    C PN +TY+ +IDGLCK 
Sbjct: 145 CSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKA 204

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V +A EL   MK    +PDV+TYT ++ G C  +    A  +  EM+D G  P++VT+
Sbjct: 205 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 264

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LC+  ++  A  L+  M  RG  PN  TY TLIDG C   ++  A  +   M  
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 324

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D++ YN LIN  CK   V+E+++L    +S GIKP VVTY+++  GL   ++++ 
Sbjct: 325 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 384

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +L   ++      D   Y+  IDGLCK+G V EA +L+  +     + ++V+Y+ LID
Sbjct: 385 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID 444

Query: 507 GL 508
           GL
Sbjct: 445 GL 446



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 168/337 (49%), Gaps = 36/337 (10%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK-------- 250
           C+PDV+TY  L+ G CR G    A   F+EM + N    V         +CK        
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                        +TV Y  ++ GL KE  +D+A  +  +M+D    P+VVTY S+I G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR------ 352
           C  N+ + A+ LF  M      P +VT++ ++D L + GK+++A  L + M+ R      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 353 -GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
              +PN  TY+ LIDG C  +++  A +L  SM++ GC  DV++Y  L++  CK   V  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  +  EML  G  P +VTYN+L  GL    +V  AL L  +M       +  TY   ID
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G V +A  +   + D     +++ YN LI+GL
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 162/312 (51%), Gaps = 11/312 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K        ++   +   G  PD+  +++LIN  CK  +V     +
Sbjct: 294 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 353

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R +     P+ VT++S+I GLC  +R+ EA  L    +   C PDV  Y+TLI+GLC+
Sbjct: 354 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 413

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +L+E MA G+G     C  + VTY+T+IDGLCK G VD+A  L  +M     
Sbjct: 414 AGKVDEAFDLYEVMA-GDG-----CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 467

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P  +TY S+I+G C  N  +EA  L  EM      P  VT+++++  +C+  ++D A  
Sbjct: 468 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVV 527

Query: 345 LLELMIWR-----GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           LLE    R     G   +T  Y++LIDG C   ++  A   F  M  NG + D ++Y+ L
Sbjct: 528 LLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSIL 587

Query: 400 INWYCKNKDVEE 411
           +    K+KD+ E
Sbjct: 588 LEGLKKSKDLHE 599



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 151/268 (56%), Gaps = 7/268 (2%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +C+P+  TY  ++ G C+ G +D+A+  F +M+ +N+ P+V   + +I G C A    +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            R F  M   G+  D V ++ ++  L K  ++D+A  +L  M   G  PN  TYN+LIDG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----- 422
            C  ++ D A++LF  M+S  C   +V+YNTL++   +   +E A++L+ EML +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 423 --GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                P V+TY+ L  GL + ++V +A++L + M+    + D  TY   +DGLCK   V 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            A E+ R + D+    N+V+YN L+ GL
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGL 271



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+  ++++G L ++   D    L   + S G  PD+  +S LI+  CK G+V   F 
Sbjct: 364 PDVVTYSSVIYG-LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +       + VT+++LI GLC   R+ EA  L  +       P   TYN+LI GLC
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 482

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
              H   A+ L EEM   N      C P+ VTYN +I G+C+   VD A  L  + K   
Sbjct: 483 DLNHLDEAIELVEEMERSN------CAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARC 536

Query: 284 INP-----DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           +       D + Y+S+I G C A    EA   F EM+D GV PD +T+S++++ L K+  
Sbjct: 537 VAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 596

Query: 339 MDKASRL-LELMIWRG 353
           + +   L L+ M+  G
Sbjct: 597 LHELRHLVLDQMVQLG 612


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 158/467 (33%), Positives = 244/467 (52%), Gaps = 52/467 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P ++T+
Sbjct: 38  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 95

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILI C C+ GR+  GF  LG +++  F  +A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C PDVF+YN L+ GLC    +  AL L   MA+  G       P+ V+YNT+++G  
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYNTVLNGFF 212

Query: 265 KEGF--------VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           KEG         +DKA E+   M    + PD +TY S++ G+C +    EA     +M  
Sbjct: 213 KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 272

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKA---------------------------------- 342
            GV+P+VVT+S +M+ LCKNG+  +A                                  
Sbjct: 273 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIE 332

Query: 343 -SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
             +L +LM+  GV P+  TYNTLIDG CL  K+D A KL  SM S G   D+V+Y TLIN
Sbjct: 333 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            YC+   +++AL+L+ EM+S G+ P ++TYN +  GLF   +   A +L+  + ++    
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TYN  + GLCK+    EAL +F+ +  +  +L   ++N +I  L
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 499



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 204/399 (51%), Gaps = 17/399 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRL---NSAGLFPDIYTHSILINCFCKMG----- 156
           P V S+N L   L         L L   +      G  PD+ +++ ++N F K G     
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220

Query: 157 ---RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
               +     VL  ++++   P+ +T+ S++ G C+  +  EA     K R    EP+V 
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY++L+N LC+ G +  A  +F+ M     E      P+  TY T++ G CKEG V +++
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIATYRTLLQGHCKEGRVIESE 334

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +LF  M    + PD++TY ++I G C A   +EA +L   M+  GV+PD+VT+  +++  
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C+  +MD A  L + M+  GV+PN  TYN ++ G   T +   A++L+VS+  +G   ++
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +YN +++  CKN   +EAL ++  +    ++    T+N +   L +  +++ A  LF  
Sbjct: 455 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 514

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
              N +  D  TY+   + L + G + E  +LF ++ ++
Sbjct: 515 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN 553



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 204/433 (47%), Gaps = 24/433 (5%)

Query: 88  NEALCIFDYML--RMHPSPPPVSSFNILFGCLAKN--------KHYDTVLSLFKRLNSAG 137
            EAL +   M   R   SPP V S+N +     K         +  D  + +   +   G
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNG 239

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           + PD  T++ +++ +C  G+       L ++      PN VT++SL+  LC   R  EA 
Sbjct: 240 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 299

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            +F        EPD+ TY TL+ G C+ G  I +  LF+ M       GV  KP+ +TYN
Sbjct: 300 KIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV----RIGV--KPDIITYN 353

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T+IDG C  G +D+A +L   M    + PD+VTY ++I G+C  +  ++A  LF EM+  
Sbjct: 354 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 413

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           GV P+++T+++I+  L    +   A  L   +   G      TYN ++ G C  +  D A
Sbjct: 414 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 473

Query: 378 RKLFVSMESNGCMHDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            ++F     N C+ D+     ++N +I    K   ++EA  L++   + G+ P V TY+ 
Sbjct: 474 LRMF----QNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 529

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +   L E   +E    LF  M  N  +AD+   N+ +  L + G +  A      I +  
Sbjct: 530 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 589

Query: 494 YELNIVSYNCLID 506
           + L   + + L++
Sbjct: 590 FSLEASTASFLLE 602


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/438 (33%), Positives = 247/438 (56%), Gaps = 11/438 (2%)

Query: 71   KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
            +ER +S    +++ I  ++A  +F  ML+  P P  V  F  +   +AK   +D V+ LF
Sbjct: 584  RERLRS----ELHCIKFDDAFGLFCEMLQSRPIPSIVD-FTRVLTAIAKMNKFDIVIYLF 638

Query: 131  KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
             ++ + G+  D+Y+ +ILI+CFC+  R S    +LG++++  F P+ VT  SL+ G C  
Sbjct: 639  HKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQG 698

Query: 191  SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            +R  EA +L         EP+V  YNT+INGLC+      AL +F  M       G+V  
Sbjct: 699  NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK----GIV-- 752

Query: 251  PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
             + VTYNT+I GLC  G    A  L   M    I+P+V+ +T++I  F    +  EAK L
Sbjct: 753  ADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNL 812

Query: 311  FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
            + EM+ + V P+++T++ +++  C  G++  A  + +LM+ +G  P+  TYNTLI G+C 
Sbjct: 813  YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCK 872

Query: 371  TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
            + +++   KLF  M   G + D  +YNTLI+ YC+   +  A  +++ M+  G+ P +VT
Sbjct: 873  SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932

Query: 431  YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            YN L   L    ++E+AL + +++++N +  D  TYN  I G+C++  V EA  LFR++ 
Sbjct: 933  YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992

Query: 491  DSKYELNIVSYNCLIDGL 508
                +L+ ++Y  +I GL
Sbjct: 993  RKGVKLDAIAYITMISGL 1010



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/429 (33%), Positives = 236/429 (55%), Gaps = 6/429 (1%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G ++ I   +AL +F  M++  P  P V  F  L   +A  + Y+TV+   +++   G+ 
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQP-LPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGIS 97

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
            D+Y+ +ILI+CFC+  R+S    +LG++++  + P+ VTF SL+ G C  +RI +A +L
Sbjct: 98  HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
                    EP+V  YNTLI+ LC+ G   +AL L  EM    G        + VTYNT+
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK-KGRLA----ADLVTYNTL 212

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           + GLC  G   +A  +   M    INPDV T+T++I  F    + +EA+ L+ +M+   +
Sbjct: 213 LTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSI 272

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+ VT++ +++ LC +G++  A +  +LM  +G  PN  TYNTLI+G+C + +++   K
Sbjct: 273 GPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMK 332

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF  M   G + D  +YNTLI+ YC+   +  A  ++S M+S G+ P ++T+  L  GL 
Sbjct: 333 LFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLC 392

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              ++  A+  F++MR          YN  I GLCK+  V EA ELF  +     + +  
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDAR 452

Query: 500 SYNCLIDGL 508
           +Y  +I GL
Sbjct: 453 TYTIMILGL 461



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 183/345 (53%), Gaps = 7/345 (2%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             EA+ + D M  +   P  V  +N +   L KN+  +  L +F  +   G+  D  T++ 
Sbjct: 702  QEAVSLVDSMAELGLEPN-VVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI+  C  GR +    +L  +++    PN + FT+LI     E  ++EA  L+ +    +
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              P++ TYN+LING C  G    A ++F+ M +        C P+ VTYNT+I G CK  
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG------CFPDVVTYNTLITGFCKSK 874

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             V+   +LF +M  + +  D  TY ++I G+C A   N A+++F  M+D GV PD+VT++
Sbjct: 875  RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN 934

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++D LC NGK++KA  ++E +    ++ +  TYN +I G C  DK+  A  LF S+   
Sbjct: 935  ILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRK 994

Query: 388  GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            G   D ++Y T+I+  C+N    EA  L + M   G  P+   Y+
Sbjct: 995  GVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 191/374 (51%), Gaps = 14/374 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL I   M+++   P  V+  ++L G   +N+ +D   SL   +  +G  P++  ++ LI
Sbjct: 119 ALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA-FSLVASMVKSGYEPNVVVYNTLI 177

Query: 150 NCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALF---TKHRV 205
           +C CK G V+    +L  + +      + VT+ +L+ GLC      +AA +    TK R+
Sbjct: 178 DCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRI 237

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PDVFT+  LI+   + G+   A  L+++M   +        PNTVTYN++I+GLC 
Sbjct: 238 ---NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSS------IGPNTVTYNSLINGLCM 288

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G +  AK+ F  M  +   P+VVTY ++I GFC +    +  +LF  M  +G+  D  T
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++   C+ GK+  A  +   M+  GV P+  T+  L+ G C+  +I  A   F  M 
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMR 408

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S      +V+YN +I+  CK   VEEA  L+  +  +G+KP   TY  + LGL +     
Sbjct: 409 SGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468

Query: 446 RALKLFDEMRRNHV 459
            A +LF  M+ + +
Sbjct: 469 EADELFRRMKEDGI 482



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 203/494 (41%), Gaps = 96/494 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P V ++N L     K++  +  + LF+R+   GL  D +T++ LI+ +C++G++      
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368

Query: 160 --------------------HGFVVLGRILRSCFTPN----------AVTFTSLIKGLCA 189
                               HG  V G I  +    N           V +  +I GLC 
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  LF +  V   +PD  TY  +I GLC+ G    A  LF  M     E G++C
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK----EDGIIC 484

Query: 250 KP-----------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI-------------- 284
           +            N V+  TII    +   + ++ +L+    D  +              
Sbjct: 485 QAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSS 544

Query: 285 -----------------NPDVVTYTSV---------------IRGFCYANDWNEAKRLFI 312
                            NP+  +++                 +R   +   +++A  LF 
Sbjct: 545 SVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFC 604

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM+     P +V F+ ++  + K  K D    L   M   G++ + Y++  LI  +C   
Sbjct: 605 EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +   A  L   M   G    +V+  +L+N +C+    +EA+SL   M   G++P VV YN
Sbjct: 665 RFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           T+  GL +   +  AL++F  M +  + AD  TYN  I GLC SG   +A  L R +   
Sbjct: 725 TVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784

Query: 493 KYELNIVSYNCLID 506
           K + N++ +  LID
Sbjct: 785 KIDPNVIFFTALID 798



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 6/192 (3%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++N L     K+K  +  + LF  +   GL  D +T++ LI+ +C+ G+++    V
Sbjct: 858  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 917

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              R++     P+ VT+  L+  LC   +I +A  +    +    + D+ TYN +I G+CR
Sbjct: 918  FNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCR 977

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  A  LF  +       GV  K + + Y T+I GLC+ G   +A +L  +MK++  
Sbjct: 978  NDKVKEAWCLFRSLTRK----GV--KLDAIAYITMISGLCRNGLRREADKLCTRMKEDGF 1031

Query: 285  NPDVVTYTSVIR 296
             P    Y   +R
Sbjct: 1032 MPSERIYDETLR 1043


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/413 (35%), Positives = 229/413 (55%), Gaps = 12/413 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ML++ P+PP +  FN +   L K  HY T +SLF++L   G+ P I T +IL+NC+C  G
Sbjct: 1   MLQISPTPP-ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTG 59

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTY 215
            ++  F +L +IL+  + PN++TFT+LIKG+C   +  E A LF  H V    + D  +Y
Sbjct: 60  GITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYE-ALLFHDHVVAHGFKLDQVSY 118

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             L+NGLC+ G T  A+ +  +              + V Y+TIID LCK  FV  A  L
Sbjct: 119 AILMNGLCKMGETRAAMQMLRK---------TWVNADVVMYSTIIDSLCKGKFVTDAYRL 169

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           + +M  + I P+V T++ ++   C      +A  L   MM +GV+P+VVT+  IMD  C 
Sbjct: 170 YSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCL 229

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             +++KA  +  +M+  GV PN + YN +I+G C   ++D A  LF  M       DVV+
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVT 289

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YN LI+  CK   +  +L L  EM S G    ++TYN+L   L + H +++A+ L  E++
Sbjct: 290 YNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIK 349

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +  +  TY   IDGLCK G + +A  +F+ I    Y + + +YN +I+GL
Sbjct: 350 DQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 173/328 (52%), Gaps = 6/328 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           MLR       V  ++ +   L K K       L+  + + G+FP++YT SIL++  CK  
Sbjct: 137 MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDR 196

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +      +L  +++    PN VT+ +++ G C  +++ +A  +F        EP+V+ YN
Sbjct: 197 KGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYN 256

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            +INGLC+      A+NLF+EM            P+ VTYN +IDGLCK G +  + EL 
Sbjct: 257 IIINGLCKKKRVDEAMNLFKEMHWKK------INPDVVTYNILIDGLCKLGKISTSLELV 310

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M+      D++TY S++   C  +  ++A  L  E+ DQG+QP+V T++ ++D LCK+
Sbjct: 311 DEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKD 370

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A  + + ++  G +   +TYN +I+G C     D A  L   ME N C+ D VSY
Sbjct: 371 GRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSY 430

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGI 424
            T+I    +  +  +   L   M+ +G+
Sbjct: 431 ETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 29/280 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F+IL   L K++     ++L   +   G+ P++ T+  +++ +C + +V+    +
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    PN   +  +I GLC + R+ EA  LF +       PDV TYN LI+GLC+
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299

Query: 225 TGHTIVALNLFEEMAN---------GNGEFGVVCK--------------------PNTVT 255
            G    +L L +EM +          N     +CK                    PN  T
Sbjct: 300 LGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y T+IDGLCK+G ++ A  +F ++  E  +  V TY  +I G C    ++EA  L   M 
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           D    PD V++  I+  L + G+  K ++LL  MI RG++
Sbjct: 420 DNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  271 bits (692), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 142/421 (33%), Positives = 234/421 (55%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +F +M+     P   +   ++ G L+  K +  V+ + + +++ GL PD Y +++
Sbjct: 219 DRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGK-WKEVVQMLQEMSTHGLQPDCYIYAV 277

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR +    +   ++R    PN   +  L+ G   E  + E  +         
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG 337

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N +     +      A+++F++M            PN VTY  +ID LCK G
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR------LSPNIVTYGALIDALCKLG 391

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F +M DE + PD+  ++S++ G C  + W +A+ LF E++DQG++ D V F+
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +M  LC+ G++ +A RL++LM+  GV P+  +YNTL+DG+CLT +ID A KL   + S 
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YNTL++ YCK + +++A SL+ EML KG+ P VVTYNT+  GLF+  +   A
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M  +    + YTYN  I+GLCK+ FV EA ++F ++     +L+I + N +I  
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGA 631

Query: 508 L 508
           L
Sbjct: 632 L 632



 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 165/502 (32%), Positives = 255/502 (50%), Gaps = 57/502 (11%)

Query: 52  LKESLRLTVK-DRA-SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSS 109
           +  S R+T   DR   L++ + +R  S   G       N+AL +FD ML  H  P  V +
Sbjct: 1   MSRSRRVTAAADRCLELERVIADRAHSGSLG------LNDALKLFDEML-THARPASVRA 53

Query: 110 FNILFGCLAKNK---HYDTVLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           FN L   +++ +     + V+SLF R+    S  + P  +T++ILI CFC+MGR+ HGF 
Sbjct: 54  FNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFA 113

Query: 164 VLGRILRSCFTPN-AVTFTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLING 221
             G IL++ +  N  V F+ L+KGLC   R+ EA   L  +   F C PDVF+Y+ L+ G
Sbjct: 114 AFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKG 173

Query: 222 LCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            C       AL L   MA+ G+G       PN VTY T+IDGLCK   VD+AK +F  M 
Sbjct: 174 FCNEKRAEEALELLSMMADDGDGSH----TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI 229

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D+ + P+  TYT +I G+     W E  ++  EM   G+QPD   ++V++D LCKNG+  
Sbjct: 230 DKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCT 289

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGY-------------------------------- 368
           +A  + + +I +G+ PN   Y  L+ GY                                
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMF 349

Query: 369 CLTDK---IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           C   K   ID A  +F  M       ++V+Y  LI+  CK   V++A+  +++M+ +G+ 
Sbjct: 350 CAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMT 409

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P +  +++L  GL  + + E+A +LF E+    +  DT  +N  +  LC+ G V+EA  L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
              +       +++SYN L+DG
Sbjct: 470 IDLMLRVGVRPDVISYNTLVDG 491



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 198/401 (49%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FNI+F   AK    D  + +F ++    L P+I T+  LI+  CK+GRV    + 
Sbjct: 340 PDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLK 399

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++    TP+   F+SL+ GLC   +  +A  LF +        D   +NTL+  LCR
Sbjct: 400 FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR 459

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L + M        V  +P+ ++YNT++DG C  G +D+A +L   +    +
Sbjct: 460 EGRVMEAQRLIDLM------LRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY +++ G+C A   ++A  LF EM+ +G+ PDVVT++ I+  L + G+  +A  
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI      N YTYN +I+G C  + +D A K+F S+ S     D+ + N +I    
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    E+A+ L++ + + G+ P V TY  +   L +   +E   +LF  M  N  A ++ 
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             N  +  L   G +  A      + +  + L   + + LI
Sbjct: 694 MLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 6/306 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN L   L +         L   +   G+ PD+ +++ L++  C  GR+     +L  I+
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+ VT+ +L+ G C   RI +A +LF +  +    PDV TYNT+++GL +TG   
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L+  M N   +       N  TYN II+GLCK  FVD+A ++F  +  +++  D+ 
Sbjct: 570 EAKELYLSMINSRTQM------NIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIF 623

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T   +I          +A  LF  +   G+ PDV T+ +I + L K G +++   L   M
Sbjct: 624 TANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAM 683

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G  PN+   N L+        I+ A      ++      +  + + LI+ Y + +  
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQ 743

Query: 410 EEALSL 415
           + A SL
Sbjct: 744 QLAKSL 749


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 141/390 (36%), Positives = 230/390 (58%), Gaps = 7/390 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F+ +LR +P+PP +  FN + G L K+KHY TVL L K++   G+ P++   +I
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIE-FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC++G +   F V  +IL+  + PN +TFT+LIKGLC + +I +A     K     
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +Y TLI+GLC+ G T  AL+L   +       G + +PN V Y+TIIDG+CK+ 
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVD------GKLVQPNVVMYSTIIDGMCKDK 241

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A +L+ +M  + I+P+VVTY+++I GF       +A  LF +M+ + ++PDV TF+
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK+GK+  A +L++ M  RG  PN  TY++++D  C T ++D A  L   ++  
Sbjct: 302 ILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQ 361

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   ++ +Y  LI+  C +  +E+A +++ ++L KG   TVVTY  +F G  +    + A
Sbjct: 362 GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEA 421

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             L  +M  N    D  TY      L K G
Sbjct: 422 SALLSKMEENGCIPDAKTYELIKLSLFKKG 451



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 173/341 (50%), Gaps = 6/341 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +LR   TP A+ F  ++  L           L  K      +P++   N LIN  C+ G 
Sbjct: 78  LLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGL 137

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A ++F ++        +   PNT+T+ T+I GLC +G + +A     K+       +
Sbjct: 138 IPFAFSVFAKI------LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFN 191

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            ++Y ++I G C   +   A  L   +  + VQP+VV +S I+D +CK+  ++ A  L  
Sbjct: 192 QISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYS 251

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M+ +G++PN  TY+ LI G+    K+  A  LF  M S     DV ++N L++ +CK+ 
Sbjct: 252 EMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSG 311

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  AL L  EM  +G  P +VTY+++   L + H+V++A+ L  +++   +  + +TY 
Sbjct: 312 KISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYT 371

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             IDGLC SG + +A  +F  +    Y++ +V+Y  +  G 
Sbjct: 372 ILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGF 412



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 173/333 (51%), Gaps = 6/333 (1%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N + ++S      + + + +A +LF         P    +N ++  L ++ H    L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           ++M     EF  + KPN V  N +I+  C+ G +  A  +F K+     NP+ +T+T++I
Sbjct: 111 KKM-----EFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLI 164

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           +G C     ++A     +++  G Q + +++  ++D LCK G+   A  LL  +  + V 
Sbjct: 165 KGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQ 224

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN   Y+T+IDG C    ++ A  L+  M S G   +VV+Y+ LI+ +     +++A+ L
Sbjct: 225 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDL 284

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           +++M+S+ IKP V T+N L     +  ++  ALKL DEM       +  TY++ +D LCK
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  V +A+ L   ++D     N+ +Y  LIDGL
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDGL 377



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
            PP + +++ +   L K    D  ++L  +L   G+ P+++T++ILI+  C  G++    
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +L   +    VT+  +  G C +    EA+AL +K     C PD  TY  +   L
Sbjct: 388 NIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSL 447

Query: 223 CRTGHTIVALNLFEE 237
            + G   +A  L  E
Sbjct: 448 FKKGENDMAEKLHRE 462


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 227/407 (55%), Gaps = 12/407 (2%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P   P +S    F  + K K    V+ +   L  +G  PD+ T+++LI+ +CK G + + 
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEI---LEQSGAVPDVITYNVLISGYCKSGEIDNA 203

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             VL R+      P+ VT+ ++++ LC   ++ +A  +  +     C PDV TY  LI  
Sbjct: 204 LQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 260

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+      A+ L +EM N         KP+ VTYN +I+G+CKEG +D+A +    M  
Sbjct: 261 TCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 314

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+V+T+  ++R  C    W +A++L  +M+ +G  P VVTF+++++ LC+ G + +
Sbjct: 315 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 374

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC  D+V+YNTL+ 
Sbjct: 375 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 434

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK+  V+ A+ + +++ SKG  P ++TYNT+  GL ++ + ERA+KL DEMRR  +  
Sbjct: 435 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 494

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TY++ + GL + G V EA++ F  +       N ++YN ++ GL
Sbjct: 495 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 205/419 (48%), Gaps = 32/419 (7%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +L    + P V ++N+L     K+   D  L +  R+N A   PD+ T++ ++   C  G
Sbjct: 174 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSG 230

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++     VL R L+    P+ +T+T LI+  C ES + +A  L  + R    +PDV TYN
Sbjct: 231 KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 290

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------------------------- 248
            LING+C+ G    A+     M +   +  V+                            
Sbjct: 291 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 350

Query: 249 -CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C P+ VT+N +I+ LC++G + +A ++  KM      P+ ++Y  ++ GFC     + A
Sbjct: 351 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 410

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
                 M+ +G  PD+VT++ ++  LCK+GK+D A  +L  +  +G +P   TYNT+IDG
Sbjct: 411 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 470

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                K + A KL   M   G   D+++Y++L++   +   V+EA+  + ++   GI+P 
Sbjct: 471 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 530

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +TYN++ LGL +  Q +RA+     M          TY   I+G+   G   EAL+L 
Sbjct: 531 AITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 589



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 15/356 (4%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            ++  CK SG G        +A+ + D M R   S P V ++N+L   + K    D  + 
Sbjct: 257 LIEATCKESGVG--------QAMKLLDEM-RNKGSKPDVVTYNVLINGICKEGRLDEAIK 307

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
               + S G  P++ TH+I++   C  GR      +L  +LR   +P+ VTF  LI  LC
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 367

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  +  A  +  K  +  C P+  +YN L++G C+      A+   + M +        
Sbjct: 368 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG------ 421

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+ VTYNT++  LCK+G VD A E+  ++  +  +P ++TY +VI G         A 
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L  EM  +G++PD++T+S ++  L + GK+D+A +    +   G+ PN  TYN+++ G 
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           C + + D A      M S  C     +Y  LI         +EAL L +E+ S+G+
Sbjct: 542 CKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 4/196 (2%)

Query: 311 FIE-MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           F+E M+ +G  PD++  + ++   C+ GK  KA+ ++E++   G  P+  TYN LI GYC
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            + +ID+A ++   M       DVV+YNT++   C +  +++A+ +    L K   P V+
Sbjct: 196 KSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY  L     +   V +A+KL DEMR      D  TYN  I+G+CK G + EA++    +
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312

Query: 490 RDSKYELNIVSYNCLI 505
                + N++++N ++
Sbjct: 313 PSYGCQPNVITHNIIL 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  L +NG+++   + LE M++RG  P+     +LI G+C   K   A  +   +E +G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + DV++YN LI+ YCK+ +++ AL +   M    + P VVTYNT+   L +  ++++A++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + D   +     D  TY   I+  CK   V +A++L   +R+   + ++V+YN LI+G+
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 227/407 (55%), Gaps = 12/407 (2%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P   P +S    F  + K K    V+ +   L  +G  PD+ T+++LI+ +CK G + + 
Sbjct: 90  PDIIPCTSLIRGFCRIGKTKKATWVMEI---LEQSGAVPDVITYNVLISGYCKSGEIDNA 146

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             VL R+      P+ VT+ ++++ LC   ++ +A  +  +     C PDV TY  LI  
Sbjct: 147 LQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 203

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+      A+ L +EM N         KP+ VTYN +I+G+CKEG +D+A +    M  
Sbjct: 204 TCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 257

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+V+T+  ++R  C    W +A++L  +M+ +G  P VVTF+++++ LC+ G + +
Sbjct: 258 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 317

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC  D+V+YNTL+ 
Sbjct: 318 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 377

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK+  V+ A+ + +++ SKG  P ++TYNT+  GL ++ + ERA+KL DEMRR  +  
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TY++ + GL + G V EA++ F  +       N ++YN ++ GL
Sbjct: 438 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 484



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 205/419 (48%), Gaps = 32/419 (7%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +L    + P V ++N+L     K+   D  L +  R+N A   PD+ T++ ++   C  G
Sbjct: 117 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSG 173

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++     VL R L+    P+ +T+T LI+  C ES + +A  L  + R    +PDV TYN
Sbjct: 174 KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 233

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------------------------- 248
            LING+C+ G    A+     M +   +  V+                            
Sbjct: 234 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 293

Query: 249 -CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C P+ VT+N +I+ LC++G + +A ++  KM      P+ ++Y  ++ GFC     + A
Sbjct: 294 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 353

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
                 M+ +G  PD+VT++ ++  LCK+GK+D A  +L  +  +G +P   TYNT+IDG
Sbjct: 354 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 413

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                K + A KL   M   G   D+++Y++L++   +   V+EA+  + ++   GI+P 
Sbjct: 414 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 473

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +TYN++ LGL +  Q +RA+     M          TY   I+G+   G   EAL+L 
Sbjct: 474 AITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 532



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 27/386 (6%)

Query: 49  TSKLKESLRLTVKDRASLKK----------FLKERCKSSGQGDINLITPNEALCIFDYML 98
           + KLK+++   V DR   K+           ++  CK SG G        +A+ + D M 
Sbjct: 172 SGKLKQAME--VLDRQLQKECYPDVITYTILIEATCKESGVG--------QAMKLLDEM- 220

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R   S P V ++N+L   + K    D  +     + S G  P++ TH+I++   C  GR 
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW 280

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +L  +LR   +P+ VTF  LI  LC +  +  A  +  K  +  C P+  +YN L
Sbjct: 281 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 340

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++G C+      A+   + M +        C P+ VTYNT++  LCK+G VD A E+  +
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           +  +  +P ++TY +VI G         A +L  EM  +G++PD++T+S ++  L + GK
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A +    +   G+ PN  TYN+++ G C + + D A      M S  C     +Y  
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGI 424
           LI         +EAL L +E+ S+G+
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 4/196 (2%)

Query: 311 FIE-MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           F+E M+ +G  PD++  + ++   C+ GK  KA+ ++E++   G  P+  TYN LI GYC
Sbjct: 79  FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            + +ID+A ++   M       DVV+YNT++   C +  +++A+ +    L K   P V+
Sbjct: 139 KSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY  L     +   V +A+KL DEMR      D  TYN  I+G+CK G + EA++    +
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255

Query: 490 RDSKYELNIVSYNCLI 505
                + N++++N ++
Sbjct: 256 PSYGCQPNVITHNIIL 271



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  L +NG+++   + LE M++RG  P+     +LI G+C   K   A  +   +E +G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + DV++YN LI+ YCK+ +++ AL +   M    + P VVTYNT+   L +  ++++A++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + D   +     D  TY   I+  CK   V +A++L   +R+   + ++V+YN LI+G+
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 232/401 (57%), Gaps = 8/401 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           FN L   L K K Y+ V+SL+  L S   + P + T SILIN F ++G++   F +LG I
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L+  F  +    T+L+KGLC + R++EA +L  ++       D   Y T+INGLC+ G T
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ +F +M        +   PN + YNT+IDGLCK+G VD+A  L  +M +  I  DV
Sbjct: 192 RDAIQMFPKMKK------IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDV 245

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            +Y S+I GFC    +  A +L  EM+ +G V PDV TF++++D LCK G++ +A  ++ 
Sbjct: 246 YSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVA 305

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           +MI RG  P+  +YN L++GYCL+  +  A+++F  M     + +V+SY TLIN YCK +
Sbjct: 306 VMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVR 365

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V+EA+ L +EM +K + P  VTYN L  GL +  +      L + MR +   AD  TYN
Sbjct: 366 MVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYN 425

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +D   K     +AL LF+ I +     NI +YN L+DGL
Sbjct: 426 VLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGL 466



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 7/209 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M+    + P V S+  L     K +  D  + L   +++  L PD  T++ L
Sbjct: 334 EAKQVFDKMVE-RTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCL 392

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++   K GR  + + ++  +  S    + +T+  L+       +  +A ALF        
Sbjct: 393 LDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGI 452

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++ TYN L++GLC++G    A  +F+ ++         C+PN  TYN +I GLCKEGF
Sbjct: 453 SPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG------CQPNIRTYNIMIHGLCKEGF 506

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRG 297
           +D+A+ L  KM + N  P+ +T+ +++R 
Sbjct: 507 LDEAEALLYKMVNNNYLPNYITFDTIVRA 535



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 65/125 (52%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R    P  + ++N+L     K++ +D  L+LF+ +   G+ P+I T++IL++  CK GR
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           + +   +   +      PN  T+  +I GLC E  + EA AL  K       P+  T++T
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531

Query: 218 LINGL 222
           ++  +
Sbjct: 532 IVRAI 536


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/438 (34%), Positives = 239/438 (54%), Gaps = 43/438 (9%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           P+  FN + G L K K+Y TV+SL K+++  G+  ++ T SILINCFC +G+++  F +L
Sbjct: 9   PIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLL 68

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
           G+IL+  + PN +T+T+L+KGLC +  + +      K    A + +  +Y TL+NGLC+T
Sbjct: 69  GKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           G T  A+ L   + + +       +PN V Y+ IIDGLCK+  V++A +L+ +M    I 
Sbjct: 129 GETRCAIKLLRMIEDRS------TRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+V+TY ++I  FC A     A  L  EM+ + + PDV TFS+++D LCK GK   A ++
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQI 240

Query: 346 LELMIWRGVNPNTY-----------------------------------TYNTLIDGYCL 370
              M+  GVNPN Y                                   TYN+LIDG C 
Sbjct: 241 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 300

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           + +I  A  L   M   G   DVV+Y +L++  CKN+++++A +L+ +M  +GI+PT+ T
Sbjct: 301 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 360

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y  L  GL +  +++ A +LF  +       D +TY   I GLCK G   EAL +   + 
Sbjct: 361 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420

Query: 491 DSKYELNIVSYNCLIDGL 508
           D+    N V++  +I  L
Sbjct: 421 DNGCIPNAVTFEIIIRSL 438



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 184/361 (50%), Gaps = 12/361 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K       + L + +      P++  +S +I+  CK   V+  + +   +
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +T+ +LI   C   ++M A +L  +  +    PDV+T++ LI+ LC+ G  
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN 236

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  +F  M     + GV   PN  +YN +I+GLCK   VD+A  L  +M  +N+ PD 
Sbjct: 237 --AKQIFHAMV----QMGV--NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 288

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY S+I G C +     A  L  EM  +G   DVVT++ ++D LCKN  +DKA+ L   
Sbjct: 289 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 348

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RG+ P  YTY  LIDG C   ++ +A++LF  +   GC  DV +Y  +I+  CK   
Sbjct: 349 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 408

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            +EAL++ S+M   G  P  VT+  +   LFE  + ++A KL  EM    +A     + N
Sbjct: 409 FDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM----IAKGLLGFRN 464

Query: 469 F 469
           F
Sbjct: 465 F 465



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 176/328 (53%), Gaps = 8/328 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+    + P V  ++ +   L K+K  +    L+  +++  +FP++ T++ LI  FC  G
Sbjct: 140 MIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAG 199

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++   F +L  ++     P+  TF+ LI  LC E +   A  +F         P+V++YN
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYN 257

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            +INGLC+      A+NL  EM + N        P+TVTYN++IDGLCK G +  A  L 
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKN------MVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M       DVVTYTS++   C   + ++A  LF++M ++G+QP + T++ ++D LCK 
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++  A  L + ++ +G   + +TY  +I G C     D A  +   ME NGC+ + V++
Sbjct: 372 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGI 424
             +I    +  + ++A  L  EM++KG+
Sbjct: 432 EIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IF  M++M  +P  V S+NI+   L K K  D  ++L + +    + PD  T++ LI+  
Sbjct: 240 IFHAMVQMGVNPN-VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR++    ++  +       + VT+TSL+  LC    + +A ALF K +    +P +
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +TY  LI+GLC+ G    A  LF+ +          C  +  TY  +I GLCKEG  D+A
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLLVKG------CCIDVWTYTVMISGLCKEGMFDEA 412

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
             +  KM+D    P+ VT+  +IR     ++ ++A++L  EM+ +G+
Sbjct: 413 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 150/404 (37%), Positives = 223/404 (55%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L  CL K   +D  L L   +   G  PD+ T++ LI+   K GR+S  F +
Sbjct: 77  PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTL 136

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T+ SLI GL    R  +A  L  +     C PDV TY++LI GL +
Sbjct: 137 FAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK 196

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T+ A  LF+EM    G      KP+++T+  ++D L K G VD A EL  +MK+  +
Sbjct: 197 DGETVKAFKLFQEMKR-RGR-----KPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P VVTY ++I GF    D  EA  L  EM   G +PDVVT+S ++  L K  ++D+A +
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ M   G  P+T TYNTLI+G      ++ A +LF  M+S GC  DVV+Y+TLI    
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VE A  L+ EM S GI+P + TY ++   L +  QV+ A +LF EMR   ++ D  
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN F++ L + G   EA ++F  +++S    ++ +Y+ L+ GL
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/446 (34%), Positives = 220/446 (49%), Gaps = 42/446 (9%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           ++  PSP  V ++N L   LAK    +    LF+ L +A   PD+ ++S LIN   + G+
Sbjct: 1   MKGFPSPN-VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGK 59

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
                 V+  +      PN  T+ +L+  L    +  EA  L  + R   C PDV TYN 
Sbjct: 60  WEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNC 119

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+ L + G    A  LF EM     E G  C P+T TYN++I GL K G   KA EL  
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMR----ERG--CVPDTFTYNSLIYGLGKVGRSQKAMELLE 173

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M+     PDV+TY+S+I G     +  +A +LF EM  +G +PD +TF+ +MD L K G
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGY----------------------------- 368
           ++D A  LL+ M  RGV P   TYN LI G+                             
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293

Query: 369 CL------TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           CL        ++D A ++   ME  GC  D ++YNTLIN   K   + +A  L+  M SK
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P VVTY+TL   L +  +VE A  LF+EM    +  D +TY + I  L K+G V +A
Sbjct: 354 GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA 413

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             LF  +R      ++++YN  ++ L
Sbjct: 414 DRLFSEMRGKGLSPDVITYNAFLNSL 439



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 207/421 (49%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M R     P   ++N L   L K       + L + +   G  PD+ T+S 
Sbjct: 131 SEAFTLFAEM-RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI    K G     F +   + R    P+++TFT+L+  L    R+ +A  L  + +   
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P V TYN LI G  + G  + A NL +EM   NG     CKP+ VTY+ +I GL K  
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR-NG-----CKPDVVTYSCLITGLIKAS 303

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A ++  KM+ E   PD +TY ++I G   A   N+A RLF  M  +G  PDVVT+S
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  L K  +++ A  L E M   G+ P+ +TY ++I       ++D A +LF  M   
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV++YN  +N   +    +EA  ++ +M   G+ P V TY+ L LGL +  +V+ A
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L  E+     A D+  ++  ++ L   G V EA EL +            SYN LID 
Sbjct: 484 CGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDA 543

Query: 508 L 508
           L
Sbjct: 544 L 544



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 205/417 (49%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  M R    P  ++ F  L   L K    D  L L   +   G+ P + T++ L
Sbjct: 202 KAFKLFQEMKRRGRKPDSIT-FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  F K+G +   + +L  + R+   P+ VT++ LI GL   S++ EA  +  K     C
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TYNTLINGL + G    A  LF+ M +        C P+ VTY+T+I  L K   
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG------CNPDVVTYSTLITALGKAAR 374

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A  LF +M+   I PD+ TY S+I     A   ++A RLF EM  +G+ PDV+T++ 
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            ++ L + G+  +A ++ E M   G+ P+  TY+ L+ G   T ++D A  L   +   G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D + ++  +       +V+EA  L     SKG+ P   +YN L   L +  +V  A 
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
              ++++      D  +Y++ I  L ++G +  A EL   +     +L+  SY+ L+
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 129/311 (41%), Gaps = 51/311 (16%)

Query: 66  LKKFLKERCKS---------SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGC 116
           LKK  KE C           +G G   L+  N+A  +FD M +     P V +++ L   
Sbjct: 312 LKKMEKEGCPPDTITYNTLINGLGKAGLL--NDAGRLFDRM-KSKGCNPDVVTYSTLITA 368

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L K    ++   LF+ + S G+ PD++T+  +I    K G+V     +   +     +P+
Sbjct: 369 LGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            +T+ + +  L    R  EA  +F   +     PDV TY+ L+ GL +T     A  L +
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488

Query: 237 EM----------------------------------ANGNGEFGVVCKPNTVTYNTIIDG 262
           E+                                  AN  G +     P   +YN +ID 
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW-----PGASSYNALIDA 543

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L K G V +A      +K++   PD+V+Y+S+I         + A  L  EM  +G++  
Sbjct: 544 LAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLS 603

Query: 323 VVTFSVIMDEL 333
             ++S ++ +L
Sbjct: 604 PRSYSNLVRKL 614


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 234/421 (55%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL +F  M+   P P  V  F  L   +AK K +D V+SLF+++   G+ P +YT +I
Sbjct: 64  NEALDLFTRMVHSRPLPSIVD-FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++NC C+  +       LG++++  F P+ VTFTSL+ G C  +RI +A ALF +     
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY TLI+ LC+  H   A+ +F +M    G+ G+  +PN VTYN+++ GLC+ G
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM----GDNGI--RPNVVTYNSLVSGLCEIG 236

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A  L   M    I P+V+T+T++I  F       EAK L+  M+   V PDV T++
Sbjct: 237 RWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYT 296

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ LC  G++D+A ++  LM   G  PN  TY TLI G+C + +++   K+F  M   
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + + ++Y  LI  YC     + A  ++++M S+   P + TYN L  GL     VE+A
Sbjct: 357 GLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKA 416

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L +F  MR+  +  +  TY   I G+CK G V +A +LF ++     + N+++Y  +I G
Sbjct: 417 LMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 476

Query: 508 L 508
            
Sbjct: 477 F 477



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 188/338 (55%), Gaps = 7/338 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD ++ M    P V ++  L  CL KN+H +  + +F ++   G+ P++ T++ L
Sbjct: 170 DALALFDQIVGM-GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  C++GR S    +L  +++    PN +TFT+LI       +IMEA  L+      + 
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSV 288

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFTY  LINGLC  G    A  +F  M + NG +     PN VTY T+I G CK   
Sbjct: 289 YPDVFTYTALINGLCTYGRLDEARQMFYLMES-NGYY-----PNEVTYTTLIHGFCKSKR 342

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+   ++F +M  + +  + +TYT +I+G+C     + A+ +F +M  +   PD+ T++V
Sbjct: 343 VEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNV 402

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LC NG ++KA  + + M  R ++ N  TY  +I G C   K++ A  LF S+ S G
Sbjct: 403 LLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKG 462

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
              +V++Y T+I+ +C+   + EA +L+ +M   G  P
Sbjct: 463 MKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 6/253 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L     K         L+K +    ++PD++T++ LIN  C  GR+     +
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  + + PN VT+T+LI G C   R+ +   +F +        +  TY  LI G C 
Sbjct: 315 FYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCL 374

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   VA  +F +M +          P+  TYN ++DGLC  G+V+KA  +F  M+   +
Sbjct: 375 VGRPDVAQEVFNQMGSRRAP------PDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + ++VTYT +I+G C      +A  LF  +  +G++P+V+T++ ++   C+ G + +A  
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 345 LLELMIWRGVNPN 357
           L + M   G  PN
Sbjct: 489 LFKKMKEDGFLPN 501


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 152/422 (36%), Positives = 239/422 (56%), Gaps = 14/422 (3%)

Query: 90  ALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           A+ +F  ML  R H     V SFNIL   L +    +T L  F++++     P++ T+S+
Sbjct: 64  AMALFQEMLDRRSHD----VISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK  RVS    +L  +     +P+ +T+T L+ GLC ES++  A  +  +     
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P++ TYN+L++GLCR      AL L  +M          C PN VTY T+IDGLCK G
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTYGTLIDGLCKVG 232

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A  +   M D+   PD++ Y  +I G C A+  +E+  L    +  G++PDVVT+S
Sbjct: 233 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 292

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC++ ++D+A RLL  +  RG  P+   Y+TLIDG C   K+D A  L+  M  +
Sbjct: 293 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD 352

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  DVV+Y+TLI+  CK   V+EA  L + M+  G  P+ +TYN+L  GL +++ ++ A
Sbjct: 353 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV-LEALELFRAIRDSKYELNIVSYNCLID 506
           ++L +EM R++ A    TYN  I G+C+   V   AL+ F+ + D+    + ++Y+ L++
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLE 472

Query: 507 GL 508
           GL
Sbjct: 473 GL 474



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 203/373 (54%), Gaps = 7/373 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++++L   L K       + L + + + G  PD+ T++IL++  CK  +V+  + V
Sbjct: 111 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 170

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L +   PN VT+ SL+ GLC   R+ +A AL        C P+V TY TLI+GLC+
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  +M +  G       P+ + YN +I+GLCK   VD++  L  +     I
Sbjct: 231 VGRVKDACAMLADMIDKGG------TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+SVI G C +N  +EA RL + +  +G  PDV+ +S ++D LCK GK+D+A  
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E+M   G + +  TY+TLIDG C   ++D A  L   M   G     ++YN+LI   C
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA-LKLFDEMRRNHVAADT 463
               ++EA+ L  EM      P+ VTYN L  G+  + +V+ A L  F EM  N V  D 
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464

Query: 464 YTYNNFIDGLCKS 476
            TY+  ++GL KS
Sbjct: 465 ITYSILLEGLKKS 477



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 190/361 (52%), Gaps = 27/361 (7%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PN VT+ SLI GLC  +    A  LF   +   C P + TYNTL++GL RTG    A+ L
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67

Query: 235 FEEMANGNGE----FGVV-----------------------CKPNTVTYNTIIDGLCKEG 267
           F+EM +        F ++                       C PN +TY+ +IDGLCK  
Sbjct: 68  FQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKAN 127

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A EL   MK    +PDV+TYT ++ G C  +    A  +  EM+D G  P++VT++
Sbjct: 128 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 187

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC+  ++  A  L+  M  RG  PN  TY TLIDG C   ++  A  +   M   
Sbjct: 188 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 247

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D++ YN LIN  CK   V+E+++L    +S GIKP VVTY+++  GL   ++++ A
Sbjct: 248 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 307

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L   ++      D   Y+  IDGLCK+G V EA +L+  +     + ++V+Y+ LIDG
Sbjct: 308 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDG 367

Query: 508 L 508
           L
Sbjct: 368 L 368



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 174/305 (57%), Gaps = 8/305 (2%)

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
           R   CEP+V TYN+LI+GLC+      A  LFE M +      V C P+ VTYNT++DGL
Sbjct: 2   RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS------VECSPSMVTYNTLLDGL 55

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + G +++A  LF +M D   + DV+++  ++ G C A     A   F   MD    P+V
Sbjct: 56  FRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFF-RKMDDRCSPNV 113

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           +T+SV++D LCK  ++ +A  LLE M  RG +P+  TY  L+DG C   K+  A ++   
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 173

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   GC+ ++V+YN+L++  C+ + V +AL+L  +M  +G  P VVTY TL  GL ++ +
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V+ A  +  +M       D   YN  I+GLCK+  V E++ L R       + ++V+Y+ 
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293

Query: 504 LIDGL 508
           +I GL
Sbjct: 294 VIYGL 298



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 33/263 (12%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M+D    P+VVTY S+I G C  N+ + A+ LF  M      P +VT++ ++D L + GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 339 MDKASRLLELMIWR---------------------------------GVNPNTYTYNTLI 365
           +++A  L + M+ R                                   +PN  TY+ LI
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DG C  +++  A +L  SM++ GC  DV++Y  L++  CK   V  A  +  EML  G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P +VTYN+L  GL    +V  AL L  +M       +  TY   IDGLCK G V +A  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
              + D     +++ YN LI+GL
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGL 263



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 43/286 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K        ++   +   G  PD+  +++LIN  CK  +V     +
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 275

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R +     P+ VT++S+I GLC  +R+ EA  L    +   C PDV  Y+TLI+GLC+
Sbjct: 276 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 335

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +L+E M  G+G     C  + VTY+T+IDGLCK G VD+A  L  +M     
Sbjct: 336 AGKVDEAFDLYEVM-TGDG-----CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 389

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRL---------------------------------- 310
            P  +TY S+I+G C  N  +EA  L                                  
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL 449

Query: 311 --FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL-LELMIWRG 353
             F EM+D GV PD +T+S++++ L K+  + +   L L+ M+  G
Sbjct: 450 DYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 240/445 (53%), Gaps = 26/445 (5%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK--NKHYDTVLSLFKRLNSAGLFP 140
           N +  ++A+  F  MLRM+PSP  +  FN + G L K  N +Y   +SL+ RL    + P
Sbjct: 23  NHVDVHDAISSFYRMLRMNPSPSIIE-FNKILGSLVKSNNNNYPIAISLYHRLQLNAITP 81

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
            I T + +INC+C +G +   F VL +IL+  + P+ +T T+LIKGLC   ++ EA    
Sbjct: 82  SIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFH 141

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
                     +  +Y  LINGLC+ G T  AL +  ++       G +   N V Y+TII
Sbjct: 142 DHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKID------GKLVNTNVVMYSTII 195

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           D LCKE  V +A EL+ +M  + ++PDVVT++++I GFC    + EA  LF EM+   + 
Sbjct: 196 DSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNIN 255

Query: 321 PDVVTFSVIMDELCKNG-----------------KMDKASRLLELMIWRGVNPNTYTYNT 363
           PDV TF++++D LCK G                 +++KA  +  ++  R V P+ ++Y  
Sbjct: 256 PDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTI 315

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I   C    +D A  LF  M   G   D V+Y++LI+  CK++ +  A  L  +M ++G
Sbjct: 316 IIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARG 375

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
               V+TY +    L + HQV++A+ L  +++   +  +  TYN  IDGLCK G    A 
Sbjct: 376 QPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQ 435

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            +F+ +    Y++ + +YN +I+GL
Sbjct: 436 VIFQDLLIKGYKVTVWTYNIMINGL 460



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 189/357 (52%), Gaps = 11/357 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+ IL   L K       L + ++++   +  ++  +S +I+  CK   V+  + +  ++
Sbjct: 155 SYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQM 214

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+ VTF++LI G C   +  EA  LF +  +    PDV T+N L++ LC+ G T
Sbjct: 215 IVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGST 274

Query: 229 -----IVALNLFE--EMANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFL 277
                ++A+ + E  ++      F ++ K    P+  +Y  II  LCK   VD+A  LF 
Sbjct: 275 KETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFN 334

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M+ + I PD VTY+S+I G C +   + A  L  +M  +G   DV+T++  +  LCKN 
Sbjct: 335 EMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNH 394

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++DKA  L++ +  +G+ PN  TYN LIDG C   + ++A+ +F  +   G    V +YN
Sbjct: 395 QVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYN 454

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +IN  C     +EA++L  +M   G  P VVTY T+   LF+  +  +A KL  EM
Sbjct: 455 IMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREM 511



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 170/341 (49%), Gaps = 35/341 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  ++ +   L K K       L+ ++    + PD+ T S LI  FC +G+    F +  
Sbjct: 188 VVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFH 247

Query: 167 RILRSCFTPNAVTFTSLIKGLCAE-----------------SRIMEAAALFT---KHRVF 206
            ++ +   P+  TF  L+  LC E                 +++ +A  +F    K RV 
Sbjct: 248 EMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRV- 306

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGL 263
              PDV +Y  +I  LC+      AL+LF EM          CK   P+ VTY+++IDGL
Sbjct: 307 --TPDVHSYTIIIKRLCKIKMVDEALSLFNEMR---------CKGITPDKVTYSSLIDGL 355

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK   +  A EL  +M       DV+TYTS +   C  +  ++A  L  ++ DQG+QP++
Sbjct: 356 CKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNI 415

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T+++++D LCK G+ + A  + + ++ +G     +TYN +I+G CL    D A  L   
Sbjct: 416 NTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEK 475

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           ME NGC  DVV+Y T+I    KN +  +A  L  EM+++G+
Sbjct: 476 MEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 158/328 (48%), Gaps = 32/328 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           EA  ++  M+    SP  V+   +++G C+     +     LF  +    + PD+ T +I
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVG--QFKEAFGLFHEMVLTNINPDVCTFNI 263

Query: 148 LINCFCKMG--------------------RVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           L++  CK G                    +  H F ++G+      TP+  ++T +IK L
Sbjct: 264 LVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGK---RRVTPDVHSYTIIIKRL 320

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    + EA +LF + R     PD  TY++LI+GLC++     A  L ++M +  G+   
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM-HARGQ--- 376

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
               + +TY + +  LCK   VDKA  L  K+KD+ I P++ TY  +I G C    +  A
Sbjct: 377 --PADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENA 434

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           + +F +++ +G +  V T++++++ LC  G  D+A  LLE M   G  P+  TY T+I  
Sbjct: 435 QVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRA 494

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVS 395
               D+   A KL   M + G + + V 
Sbjct: 495 LFKNDENHKAEKLLREMIARGLLEEKVE 522


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 244/484 (50%), Gaps = 55/484 (11%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK---NKH 122
           L++ +  R +S   G       +EAL +FD +L     P  V +FN L   +++   +  
Sbjct: 15  LERVIASRARSGSLG------LDEALKLFDELLHC-ARPASVRAFNQLLTVVSRAGCSSA 67

Query: 123 YDTVLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
            + V+SLF R+    S+ + P+  T+SILI CFC+MGR+ HGF   G IL++ +  N + 
Sbjct: 68  SERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIV 127

Query: 180 FTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
            + L+KGLC   R+ EA   L  +   F C PDV  YNT+ING  R G    A NLF EM
Sbjct: 128 ISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEM 187

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            +          PN VTY T+IDGLCK   VD+AK +F +M D  + PD  TY  +I G+
Sbjct: 188 MDQG------IPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGY 241

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS--------------- 343
                W E  ++  EM   G++PD +T+++++D LCKNG+  +A                
Sbjct: 242 LSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDV 301

Query: 344 --------------------RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
                                 L+LM+  GV+PN   +N +   Y     I+ A  +F  
Sbjct: 302 AIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNK 361

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   DVVS+  LI+  CK   V++A+  +++M+++G+ P +  +++L  GL  + +
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            E+A +LF E+    +  D   +N  +  LC  G V+EA  L   +       N++SYN 
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481

Query: 504 LIDG 507
           L+ G
Sbjct: 482 LVAG 485



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 226/435 (51%), Gaps = 31/435 (7%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++  +   L K +  D    +F+++   G+ PD  T++ LI+ +   G+      
Sbjct: 193 PPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQ 252

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      P+ +T+  L+  LC   R  EA   F        +PDV  Y  L++G  
Sbjct: 253 MLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYA 312

Query: 224 RTGHTIVALNLFEEMANGNGE------FGVV------------------------CKPNT 253
             G  +  ++ F ++  GNG       F ++                          P+ 
Sbjct: 313 TKG-ALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDV 371

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V++  +ID LCK G VD A   F +M +E + P++  ++S++ G C    W +A+ LF E
Sbjct: 372 VSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFE 431

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           ++DQG+  D V F+ +M  LC  G++ +A RL++LMI  GV PN  +YNTL+ G+CLT +
Sbjct: 432 VLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGR 491

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ID A KL   M SNG   +  +Y  L+  YCK + V++A SL+ EML KG+ P V TYNT
Sbjct: 492 IDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GLF+  +   A +L+  M  +    D YTYN  ++GLCK+ FV EA ++FR +    
Sbjct: 552 ILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611

Query: 494 YELNIVSYNCLIDGL 508
            +L+ V++N +I  L
Sbjct: 612 PQLDSVTFNIMIGAL 626



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 205/408 (50%), Gaps = 6/408 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P   ++ +L   L KN         F  +   G+ PD+  ++IL++ +   G +S 
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE 319

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
               L  ++ +  +PN   F  +      ++ I EA  +F K R     PDV ++  LI+
Sbjct: 320 MHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALID 379

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LC+ G    A+  F +M N     GV   PN   +++++ GLC  G  +KA+ELF ++ 
Sbjct: 380 ALCKLGRVDDAVLQFNQMINE----GVT--PNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D+ I  D V + +++   C      EA+RL   M+  GV+P+V++++ ++   C  G++D
Sbjct: 434 DQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRID 493

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A++LL++M+  G+ PN +TY  L+ GYC   ++D A  LF  M   G    V +YNT++
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +   +     EA  LY  M++   K  + TYN +  GL + + V+ A K+F  +      
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ 613

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D+ T+N  I  L K G   +A++LF  I       ++V+Y  + + L
Sbjct: 614 LDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENL 661



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 196/401 (48%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FNI+F   AK    +  + +F ++   GL PD+ +   LI+  CK+GRV    + 
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++    TPN   F+SL+ GLC   +  +A  LF +        D   +NTL+  LC 
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L + M        V  +PN ++YNT++ G C  G +D+A +L   M    +
Sbjct: 454 EGRVMEAQRLIDLMIR------VGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TYT ++RG+C A   ++A  LF EM+ +GV P V T++ I+  L + G+  +A+ 
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI      + YTYN +++G C  + +D A K+F  + S     D V++N +I    
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    E+A+ L++ + + G+ P VVTY  +   L E   +     LF  M ++  A +++
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             N  +  L   G +  A      + +  + L   + + LI
Sbjct: 688 MLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 6/306 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN L   L           L   +   G+ P++ +++ L+   C  GR+     +L  ++
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV 503

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   PN  T+T L++G C   R+ +A +LF +  +    P V TYNT+++GL +TG   
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L+  M N         K +  TYN I++GLCK  FVD+A ++F ++  ++   D V
Sbjct: 564 EANELYLNMINSR------TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSV 617

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T+  +I          +A  LF  +   G+ PDVVT+ +I + L + G + +   L   M
Sbjct: 618 TFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAM 677

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G  PN++  N L+        I  A      ++      +  + + LI+ Y + +  
Sbjct: 678 EKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQ 737

Query: 410 EEALSL 415
             A SL
Sbjct: 738 PHAKSL 743



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 1/115 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  +    P    V+ FNI+ G L K    +  + LF  +++ GL PD+ T+ +
Sbjct: 598 DEAFKMFRRLCSKDPQLDSVT-FNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRL 656

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +     + G +     +   + +S   PN+    +L++ L     I  A     K
Sbjct: 657 IAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYK 711


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/454 (32%), Positives = 242/454 (53%), Gaps = 42/454 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL  +  M+ M P P  V  FN+LF  +AK KHY T +SL K ++  G+ P ++T +I+I
Sbjct: 67  ALDFYHKMVTMKPFPC-VKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVI 125

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NC C++     GF VLG + +    P+ VTF +++ GLC E  + +A       +    E
Sbjct: 126 NCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYE 185

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D +T   + NGLC+ GH+  AL+  ++M   N      C  +   Y+ ++DGLCK+G V
Sbjct: 186 SDSYTCGAITNGLCKVGHSSAALSYLKKMEEKN------CNLDVTAYSGVVDGLCKDGMV 239

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  LF +M  + I PD+ TY  +I G C  + W EA  L   MM +G+ PDV TF+VI
Sbjct: 240 FEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVI 299

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
                K G + +A  +   M+  G+  +  TY ++I  +C+ +++  A ++F  M S GC
Sbjct: 300 AGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGC 359

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT---------------- 433
           + ++V+Y +LI+ +C+ K++ +A+    EM++ G+ P VVT++T                
Sbjct: 360 LPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKE 419

Query: 434 LFL-------------------GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           LFL                   GLF+ +    A+ LF E+ + +   +   YN  +DG+C
Sbjct: 420 LFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMC 479

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            SG + +ALELF  +     ++++V+YN +I GL
Sbjct: 480 SSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGL 513



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 195/431 (45%), Gaps = 29/431 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN +   L    +    +     L   G   D YT   + N  CK+G  S     
Sbjct: 151 PSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSY 210

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++       +   ++ ++ GLC +  + EA  LF++      +PD+FTYN LI+GLC 
Sbjct: 211 LKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCN 270

Query: 225 TGHTIVALNLFEEMANGN------------GEF---GVVCKP--------------NTVT 255
                 A  L   M                G F   G++ +               + VT
Sbjct: 271 FDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVT 330

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y +II   C    +  A E+F  M  +   P++VTYTS+I G+C   + N+A     EM+
Sbjct: 331 YTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMV 390

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G+ P+VVT+S ++  +CK GK   A  L  +M   G  PN  T   ++DG    +   
Sbjct: 391 NNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHS 450

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF  +E      +++ YN +++  C +  + +AL L+S + SKG+K  VVTYN + 
Sbjct: 451 EAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 510

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +   ++ A  L  +M  N    +  TYN F+ GL +   + ++ +    ++D  ++
Sbjct: 511 KGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQ 570

Query: 496 LNIVSYNCLID 506
            +  +   LI+
Sbjct: 571 ADATTTKFLIN 581



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 8/305 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN++ G   K        S+F  +   G+  D+ T++ +I   C + ++     V
Sbjct: 291 PDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEV 350

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLC 223
              ++     PN VT+TSLI G C E++ M  A  F    V    +P+V T++TLI G+C
Sbjct: 351 FDLMISKGCLPNIVTYTSLIHGWC-ETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVC 409

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G  + A  LF  M + +G+      PN  T   I+DGL K  F  +A  LF +++  N
Sbjct: 410 KAGKPVAAKELFLVM-HKHGQL-----PNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 463

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            + +++ Y  ++ G C +   N+A  LF  +  +GV+ DVVT+++++  LCK G +D A 
Sbjct: 464 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAE 523

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M   G  PN  TYN  + G     +I  + K  + M+  G   D  +   LIN++
Sbjct: 524 DLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYF 583

Query: 404 CKNKD 408
             NK+
Sbjct: 584 SANKE 588



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A + + KM      P V  +  +         +  A  L   M   GV+P V T ++
Sbjct: 64  VDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNI 123

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK-------IDHARKL- 380
           +++ LC+         +L LM   GV P+  T+NT+++G C+          +DH + + 
Sbjct: 124 VINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMG 183

Query: 381 ---------------------------FVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
                                         ME   C  DV +Y+ +++  CK+  V EAL
Sbjct: 184 YESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEAL 243

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           +L+S+M  KGI+P + TYN L  GL    + + A  L   M R  +  D  T+N      
Sbjct: 244 NLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 303

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            K+G +  A  +F  +     E ++V+Y  +I
Sbjct: 304 FKTGMISRAKSIFSFMVHMGIEHDVVTYTSII 335



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++  H   P + +  I+   L K   +   +SLF+ L       +I  ++I+++  C  G
Sbjct: 423 VMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSG 482

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +++    +   +       + VT+  +IKGLC E  + +A  L  K     C P+  TYN
Sbjct: 483 KLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYN 542

Query: 217 TLINGLCR 224
             + GL R
Sbjct: 543 VFVQGLLR 550


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 227/407 (55%), Gaps = 12/407 (2%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P   P ++    F  L K +    +L +   L  +G  PD+ T++++I+ +CK G +++ 
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             VL R+     +P+ VT+ ++++ LC   ++ +A  +  +     C PDV TY  LI  
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            CR      A+ L +EM +        C P+ VTYN +++G+CKEG +D+A +    M  
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+V+T+  ++R  C    W +A++L  +M+ +G  P VVTF+++++ LC+ G + +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC  D+V+YNT++ 
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK+  VE+A+ + +++ SKG  P ++TYNT+  GL +  +  +A+KL DEMR   +  
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           DT TY++ + GL + G V EA++ F          N V++N ++ GL
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 211/405 (52%), Gaps = 11/405 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N++     K    +  LS+  R++ +   PD+ T++ ++   C  G++     V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L R+L R C+ P+ +T+T LI+  C +S +  A  L  + R   C PDV TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+    +M +        C+PN +T+N I+  +C  G    A++L   M  + 
Sbjct: 286 KEGRLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P VVT+  +I   C       A  +  +M   G QP+ ++++ ++   CK  KMD+A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             LE M+ RG  P+  TYNT++   C   K++ A ++   + S GC   +++YNT+I+  
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K     +A+ L  EM +K +KP  +TY++L  GL    +V+ A+K F E  R  +  + 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            T+N+ + GLCKS     A++    + +   + N  SY  LI+GL
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 197/399 (49%), Gaps = 10/399 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N AL + D   RM  SP  V ++N +   L  +      + +  R+     +PD+ T++I
Sbjct: 189 NNALSVLD---RMSVSPD-VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+   V H   +L  +     TP+ VT+  L+ G+C E R+ EA           
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+V T+N ++  +C TG  + A  L  +M            P+ VT+N +I+ LC++G
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG------FSPSVVTFNILINFLCRKG 358

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A ++  KM      P+ ++Y  ++ GFC     + A      M+ +G  PD+VT++
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK+GK++ A  +L  +  +G +P   TYNT+IDG     K   A KL   M + 
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               D ++Y++L+    +   V+EA+  + E    GI+P  VT+N++ LGL +  Q +RA
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +     M       +  +Y   I+GL   G   EALEL 
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 17/389 (4%)

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
           N HY +V       NS+    D+ +++ L     + G +  GF  L  ++     P+ + 
Sbjct: 88  NGHYSSV-------NSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            T+LI+G C   +  +AA +          PDV TYN +I+G C+ G    AL++ + M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P+ VTYNTI+  LC  G + +A E+  +M   +  PDV+TYT +I   C
Sbjct: 200 ---------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
             +    A +L  EM D+G  PDVVT++V+++ +CK G++D+A + L  M   G  PN  
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           T+N ++   C T +   A KL   M   G    VV++N LIN+ C+   +  A+ +  +M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G +P  ++YN L  G  +  +++RA++  + M       D  TYN  +  LCK G V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +A+E+   +        +++YN +IDGL
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGL 459



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 177/356 (49%), Gaps = 15/356 (4%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            ++  C+ SG G         A+ + D M R     P V ++N+L   + K    D  + 
Sbjct: 245 LIEATCRDSGVG--------HAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
               + S+G  P++ TH+I++   C  GR      +L  +LR  F+P+ VTF  LI  LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  +  A  +  K     C+P+  +YN L++G C+      A+   E M +        
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------ 409

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+ VTYNT++  LCK+G V+ A E+  ++  +  +P ++TY +VI G   A    +A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L  EM  + ++PD +T+S ++  L + GK+D+A +        G+ PN  T+N+++ G 
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           C + + D A    V M + GC  +  SY  LI         +EAL L +E+ +KG+
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/404 (35%), Positives = 223/404 (55%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ IL   L K+        + + +  AG  P++ T++ LIN FCK+G +    V+
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +  +P+  T+  LI G C + R  + A L  +   + CEP+  TYNTL++ L +
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G  I A NL + M   +      CKP+  T+N +ID  CK G +D A ELF  M D   
Sbjct: 354 SGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ TY  +I G C AN  ++A++L   M + G  PDVVT++ I+  LCK  ++D+A  
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E++   G   +  T +TLIDG C + ++D A KL   ME NG   DVV+Y  LI+ +C
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++++L+ +SEML KG  PTV+TY+ +   L +  +V     L   M    V  D  
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y + IDGLCKS    EA EL++ ++ +     +V+YN L+D L
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 208/397 (52%), Gaps = 7/397 (1%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L     + K       LFK        PD  T+S LIN FCK       + +L  + +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+   + ++IKGLC   R+ ++A +  +     C P V TY  L++ LC++     
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRV-DSALVHYRDMQRNCAPSVITYTILVDALCKSARISD 254

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  + E+M          C PN VTYNT+I+G CK G +D+A  LF +M + + +PDV T
Sbjct: 255 ASLILEDMIEAG------CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G+C      +  +L  EM+  G +P+ +T++ +MD L K+GK   A  L ++M+
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            R   P+ +T+N +ID +C   ++D A +LF  M   GC+ D+ +YN +I+  C+   ++
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A  L   M   G  P VVTYN++  GL +  QV+ A ++++ +R      D  T +  I
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           DGLCKS  + +A +L R +  +    ++V+Y  LI G
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 218/400 (54%), Gaps = 7/400 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +   +   M++ +   P   ++N L   L K+  Y    +L + +      P  +T +
Sbjct: 322 PQDGAKLLQEMVK-YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 380

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++I+ FCK+G++   + +   +      P+  T+  +I G C  +RI +A  L  +    
Sbjct: 381 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 440

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDV TYN++++GLC+      A  ++E + NG G F      + VT +T+IDGLCK 
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG-GYF-----LDVVTCSTLIDGLCKS 494

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +D A++L  +M+     PDVV YT +I GFC A+  +++   F EM+D+G  P V+T+
Sbjct: 495 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++D+LCK+ ++     LL+ M+ RGV P+   Y ++IDG C +D  D A +L+  M+ 
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC   VV+YN L++  CK   ++EA+ L   M S G  P  VTYN++F G ++  + ++
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           A +LF  M+    +   + Y+  +  L     + +A+E++
Sbjct: 675 AFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIW 714



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 206/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ L     K + +     L   +   G+ P    ++ +I   C  GRV    V 
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R+C  P+ +T+T L+  LC  +RI +A+ +        C P+V TYNTLING C+
Sbjct: 225 YRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+ LF +M   +      C P+  TYN +IDG CK+       +L  +M     
Sbjct: 284 LGNMDEAVVLFNQMLENS------CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +TY +++     +  + +A  L   M+ +  +P   TF++++D  CK G++D A  
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L +LM  RG  P+ YTYN +I G C  ++ID AR+L   M   GC  DVV+YN++++  C
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V+EA  +Y  + + G    VVT +TL  GL +  +++ A KL  EM RN  A D  
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   I G CK+  + ++L  F  + D      +++Y+ +ID L
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +T + L++ F +  +    + +         +P+++T+++LI G C      +A  L  +
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  P    YNT+I GLC  G    AL  + +M          C P+ +TY  ++D 
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-------CAPSVITYTILVDA 245

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK   +  A  +   M +    P+VVTY ++I GFC   + +EA  LF +M++    PD
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V T+++++D  CK  +    ++LL+ M+  G  PN  TYNTL+D    + K   A  L  
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M    C     ++N +I+ +CK   ++ A  L+  M  +G  P + TYN +  G    +
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +++ A +L + M       D  TYN+ + GLCK+  V EA E++  +R+  Y L++V+ +
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485

Query: 503 CLIDGL 508
            LIDGL
Sbjct: 486 TLIDGL 491



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 6/319 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NI+     +    D    L +R+  AG  PD+ T++ +++  CK  +V   + V
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +    +  + VT ++LI GLC   R+ +A  L  +       PDV  Y  LI+G C+
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 528

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 +L  F EM +        C P  +TY+ +ID LCK   V     L   M +  +
Sbjct: 529 ADQLDKSLAFFSEMLDKG------CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 582

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD + YTSVI G C ++ ++EA  L+  M   G  P VVT++V++D+LCK  ++D+A  
Sbjct: 583 TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIH 642

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LLE+M   G  P+T TYN++ DG+  + + D A +LF +M+S GC      Y+ L+    
Sbjct: 643 LLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLV 702

Query: 405 KNKDVEEALSLYSEMLSKG 423
             + +++A+ ++ E L  G
Sbjct: 703 AEEKMDQAMEIWEEALEAG 721



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 142/292 (48%), Gaps = 34/292 (11%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K +  T N ++    ++    +A +LF   +    +PD +TY+++I GFC A D+ +A R
Sbjct: 129 KHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYR 188

Query: 310 LFIEMMDQGV----------------------------------QPDVVTFSVIMDELCK 335
           L  EM  +G+                                   P V+T+++++D LCK
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCK 248

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + ++  AS +LE MI  G  PN  TYNTLI+G+C    +D A  LF  M  N C  DV +
Sbjct: 249 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YN LI+ YCK +  ++   L  EM+  G +P  +TYNTL   L +  +   A  L   M 
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           R       +T+N  ID  CK G +  A ELF+ + D     +I +YN +I G
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 420



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 6/258 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + + L   L K++  D    L + +   G  PD+  ++ILI+ FCK  ++        
Sbjct: 481 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L     P  +T++ +I  LC  +R+ +   L          PD   Y ++I+GLC++ 
Sbjct: 541 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD 600

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L++ M          C P  VTYN ++D LCK   +D+A  L   M+ +   P
Sbjct: 601 SYDEAYELYKLMKQTG------CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLP 654

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY SV  GF  + + ++A RLF  M  +G  P    +S+++ +L    KMD+A  + 
Sbjct: 655 DTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIW 714

Query: 347 ELMIWRGVNPNTYTYNTL 364
           E  +  G + +     TL
Sbjct: 715 EEALEAGADVDPEISRTL 732



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 2/182 (1%)

Query: 327 SVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           SV+   L +   +DKA +  +    + G   + +T N L+  +    K   A  LF +  
Sbjct: 100 SVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHR 159

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
              C  D ++Y+TLIN +CK +D ++A  L  EM  +GI P    YNT+  GL +  +V+
Sbjct: 160 CGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVD 219

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL  + +M+RN  A    TY   +D LCKS  + +A  +   + ++    N+V+YN LI
Sbjct: 220 SALVHYRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 278

Query: 506 DG 507
           +G
Sbjct: 279 NG 280


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 227/407 (55%), Gaps = 12/407 (2%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P   P ++    F  + K +    +L +   L  +G  PD+ T++++I+ +CK G +++ 
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEV---LEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             VL R+     +P+ VT+ ++++ LC   ++ +A  +  +     C PDV TY  LI  
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            CR      A+ L +EM +        C P+ VTYN +++G+CKEG +D+A +    M  
Sbjct: 249 TCRDSGVGQAMKLLDEMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+V+T+  ++R  C    W +A++L  +M+ +G  P VVTF+++++ LC+ G + +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC  D+V+YNT++ 
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK+  VE+A+ + +++ SKG  P ++TYNT+  GL +  +  +A+KL DEMR   +  
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           DT TY++ + GL + G V EA++ F          N V++N ++ GL
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGL 529



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 201/412 (48%), Gaps = 34/412 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N++     K    +  LS+  R++ +   PD+ T++ ++   C  G++     V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L R+L R C+ P+ +T+T LI+  C +S + +A  L  + R   C PDV TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTV 254
           + G    A+    +M +   +  V+                               P+ V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T+N +I+ LC++G + +A ++  KM      P+ ++Y  ++ GFC     + A      M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           + +G  PD+VT++ ++  LCK+GK++ A  +L  +  +G +P   TYNT+IDG     K 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A KL   M +     D ++Y++L+    +   V+EA+  + E    G++P  VT+N++
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            LGL +  Q +RA+     M          +Y   I+GL   G   EALEL 
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELL 577



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F   NS+ +  D+ +++ L     + G +  GF  L  ++     P+ +  T+LI+G C 
Sbjct: 91  FSSANSSFVLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             +  +AA +          PDV TYN +I+G C+ G    AL++ + M+          
Sbjct: 150 MGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---------V 200

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ VTYNTI+  LC  G + +A E+  +M   +  PDV+TYT +I   C  +   +A +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMK 260

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM D+G  PDVVT++V+++ +CK G++D+A + L  M   G  PN  T+N ++   C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            T +   A KL   M   G    VV++N LIN+ C+   +  A+ +  +M   G +P  +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +YN L  G  +  +++RA++  + M       D  TYN  +  LCK G V +A+E+   +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 490 RDSKYELNIVSYNCLIDGL 508
                   +++YN +IDGL
Sbjct: 441 SSKGCSPVLITYNTVIDGL 459



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 15/356 (4%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            ++  C+ SG G        +A+ + D M R     P V ++N+L   + K    D  + 
Sbjct: 245 LIEATCRDSGVG--------QAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
               + S+G  P++ TH+I++   C  GR      +L  +LR  F+P+ VTF  LI  LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  +  A  +  K     C+P+  +YN L++G C+      A+   E M +        
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------ 409

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+ VTYNT++  LCK+G V+ A E+  ++  +  +P ++TY +VI G   A    +A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L  EM  + ++PD +T+S ++  L + GK+D+A +        GV PN  T+N+++ G 
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGL 529

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           C T + D A    V M + GC     SY  LI         +EAL L +E+ +KG+
Sbjct: 530 CKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 35/304 (11%)

Query: 239 ANGNGEFGVVCKP---NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           +NGNG F           V  N  +  L + G +++  +    M      PD++  T++I
Sbjct: 85  SNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144

Query: 296 RGFCYANDWNEAKRLF-------------------------------IEMMDQ-GVQPDV 323
           RGFC      +A ++                                + ++D+  V PDV
Sbjct: 145 RGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDV 204

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT++ I+  LC +GK+ +A  +L+ M+ R   P+  TY  LI+  C    +  A KL   
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDE 264

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   GC  DVV+YN L+N  CK   ++EA+   ++M S G +P V+T+N +   +    +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
              A KL  +M R   +    T+N  I+ LC+ G +  A+++   +     + N +SYN 
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384

Query: 504 LIDG 507
           L+ G
Sbjct: 385 LLHG 388


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 166/494 (33%), Positives = 244/494 (49%), Gaps = 55/494 (11%)

Query: 59  TVKDRA-SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCL 117
             +DR   L++ + +R +S   G       ++AL +FD +L  H  P  V +FN L   +
Sbjct: 7   AARDRCLELERVIADRARSGSLG------IDDALKLFDELLP-HARPASVRAFNHLLNVV 59

Query: 118 AKNKHYDT---VLSLFKRLNSA---GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           A+ +   T    +SLF R+  A    + PD+ T+SIL  CFC++GR+ HGF   G IL++
Sbjct: 60  ARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKT 119

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
            +  N V    L+ GLC   R+ EA   L  +   F C P+V + NTL+ GLC       
Sbjct: 120 GWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEE 179

Query: 231 ALNLFEEMA-NGNGEFGVVCKPNTVTYNTII----------------------------- 260
           AL L   MA +G G     C PN VTYNTII                             
Sbjct: 180 ALELLHTMAEDGGGN----CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVV 235

Query: 261 ------DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
                 DGLCK   VD+A+ +   M D+ + PDVVTY ++I G C A   + A+ +   M
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+GV+PDVVT++ I+D LCK   +D+A  +L+ MI + V P+  TYN LI GY  T + 
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
               +    M + G   DVV+Y+ L+++ CKN    EA  ++  M+ KGIKP V  Y  L
Sbjct: 356 KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G      +     L D M  N ++ + Y +N  +    K   + EA+ +F  +     
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475

Query: 495 ELNIVSYNCLIDGL 508
             ++V+Y  LID L
Sbjct: 476 SPDVVTYGILIDAL 489



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 217/404 (53%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L         +  V+   + + + GL PD+ T+S+L++  CK G+ +    +
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R    PN   +  L+ G  A   I +   L          P+ + +N ++    +
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+++F  M+    + G+   P+ VTY  +ID LCK G VD A   F +M ++ +
Sbjct: 457 KAMIDEAMHIFSRMS----QHGL--SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V + S++ G C  + W +A+ LF EM DQGV+P+VV F+ IM  LC  G++  A R
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ M   GV PN  +YNTLI G+CL  + D A +L   M S G   D++SY+TL+  YC
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++ A  L+ EML KG+ P  VTY+T+  GLF   +   A +L+  M ++    D Y
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  ++GLCK+  V EA ++F+++       NI+++  +ID L
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVL 734



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 221/455 (48%), Gaps = 47/455 (10%)

Query: 94  FDYMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSI 147
            D +LR  P     P V S N L   L   K  +  L L   +   G     P++ T++ 
Sbjct: 145 MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT 204

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   V     VL  ++      + VT++++I GLC    +  A  +        
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDV TYNT+I+GLC+      A  + + M +     GV  KP+ VTYNTIIDGLCK  
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK----GV--KPDVVTYNTIIDGLCKAQ 318

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A  +   M D+++ PD+ TY  +I G+    +W E  R   EM  +G+ PDVVT+S
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 328 VIMDELCKNGKMDKASR-----------------------------------LLELMIWR 352
           +++D LCKNGK  +A +                                   LL+LM+  
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G++PN Y +N ++  Y     ID A  +F  M  +G   DVV+Y  LI+  CK   V++A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           +  +++M++ G+ P  V +N+L  GL  + + E+A +LF EM    V  +   +N  +  
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LC  G V+ A  L  ++       N++SYN LI G
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGG 593



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 201/396 (50%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNI+    AK    D  + +F R++  GL PD+ T+ ILI+  CK+GRV    +   +++
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
               TPN+V F SL+ GLC   R  +A  LF +       P+V  +NT++  LC  G  +
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           VA  L + M        V  +PN ++YNT+I G C  G  D+A +L   M    + PD++
Sbjct: 567 VAQRLIDSMER------VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +Y +++RG+C     + A  LF EM+ +GV P  VT+S I+  L    +  +A  L   M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G   + YTYN +++G C T+ +D A K+F S+ S     +++++  +I+   K    
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A+ L++ + S G+ P VVTY  +   + +   ++    LF  M ++    D+   N  
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           I  L   G ++ A      I +  + L   + + LI
Sbjct: 801 IRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLI 836



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IF  M+R     P V+ + IL    A       +  L   + + G+ P+ Y  +I+
Sbjct: 392 EARKIFYCMIR-KGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  + K   +     +  R+ +   +P+ VT+  LI  LC   R+ +A   F +      
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+   +N+L+ GLC       A  LF EM +     GV  +PN V +NTI+  LC EG 
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ----GV--RPNVVFFNTIMCNLCNEGQ 564

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V  A+ L   M+   + P+V++Y ++I G C A   +EA +L   M+  G++PD++++  
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK G++D A  L   M+ +GV P   TY+T++ G   T +   A++L+++M  +G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +YN ++N  CK   V+EA  ++  + SK ++P ++T+  +   LF+  + + A+
Sbjct: 685 QQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  +  + +  +  TY   +  + + G + E   LF A+  S    + V  N +I  L
Sbjct: 745 DLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSL 804



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 135/278 (48%), Gaps = 10/278 (3%)

Query: 105 PPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           P V S+N L G  CLA     D    L   + S GL PD+ ++  L+  +CK GR+ + +
Sbjct: 582 PNVISYNTLIGGHCLAGRT--DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +LR   TP AVT++++++GL    R  EA  L+        + D++TYN ++NGL
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+T     A  +F+ + + +       +PN +T+  +ID L K G    A +LF  +   
Sbjct: 700 CKTNCVDEAFKIFQSLCSKD------LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSH 753

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P+VVTY  +++        +E   LF+ M   G  PD V  + I+  L   G++ +A
Sbjct: 754 GLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
              L  +     +    T + LI  +   +  +HA+ L
Sbjct: 814 GAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 7/223 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A C+F  MLR   +P  V+   IL G L   + +     L+  +  +G   DIYT++I
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQG-LFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK   V   F +   +      PN +TFT +I  L    R  +A  LF       
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY  ++  + + G      NLF  M          C P++V  N II  L   G
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG------CTPDSVMLNAIIRSLLGRG 808

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            + +A     K+ + N + +  T + +I  F      N AK L
Sbjct: 809 EIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  265 bits (676), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 138/427 (32%), Positives = 243/427 (56%), Gaps = 7/427 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           I  +  +++L +F +M++  P  P ++ F+ L   ++K K YD V+ L++++   G+  +
Sbjct: 57  IRYMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + T +IL+NCFC+  ++S     LG++++    P+ VTF SL+ G C   RI +A  +F 
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFD 175

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      EP+V  YNT+I+GLC++     AL+L   M           +P+ VTYN++I 
Sbjct: 176 RMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG------IRPDAVTYNSLIS 229

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC  G  D A  +   M    I PDV T+ ++I         +EA+ L+ EM+ + + P
Sbjct: 230 GLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D+VT+S+++  LC   ++D+A ++   M+ +G  P+  TY+ LI+GYC + K++H  KLF
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M   G + + V+Y  LI  YC+   +  A  ++  M+  G+ P ++TYN L  GL + 
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++E+AL +  +M+++ + AD  TYN  I G+CK+G V +A +L+ ++       +I +Y
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469

Query: 502 NCLIDGL 508
             ++ GL
Sbjct: 470 TAMMLGL 476



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 200/373 (53%), Gaps = 13/373 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL     M+++   P  V+  ++L G    ++ YD  L +F R+   G  P++  ++ +I
Sbjct: 135 ALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA-LYMFDRMVEMGYEPNVVIYNTII 193

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKHRVF 206
           +  CK  +V +   +L R+      P+AVT+ SLI GLC   R  +A  +    TK  ++
Sbjct: 194 DGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIY 253

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDVFT+N LI+   + G    A  L+EEM   + +      P+ VTY+ +I GLC  
Sbjct: 254 ---PDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD------PDIVTYSLLIYGLCMY 304

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +D+A+++F  M  +   PDVVTY+ +I G+C +       +LF EM  +GV  + VT+
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +V++   C+ GK++ A  + + M++ GV PN  TYN L+ G C   KI+ A  +   M+ 
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G   D+V+YN +I   CK  +V +A  LY  +  KG+ P + TY  + LGL++      
Sbjct: 425 SGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGE 484

Query: 447 ALKLFDEMRRNHV 459
           A  LF +M+ + +
Sbjct: 485 ADALFRKMKEDGI 497



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 7/338 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M+ M    P V  +N +   L K+K  D  L L  R+   G+ PD  T++ L
Sbjct: 169 DALYMFDRMVEMG-YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  GR      ++  + +    P+  TF +LI     E RI EA  L+ +    + 
Sbjct: 228 ISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PD+ TY+ LI GLC       A  +F  M +        C P+ VTY+ +I+G CK   
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG------CFPDVVTYSILINGYCKSKK 341

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+   +LF +M    +  + VTYT +I+G+C A   N A+ +F  M+  GV P+++T++V
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC NGK++KA  +L  M   G++ +  TYN +I G C   ++  A  L+ S+   G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
              D+ +Y  ++    K     EA +L+ +M   GI P
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 105/217 (48%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  ++R        +++  LF  M+     P +  FS ++  + K  K D    L E M 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G+  N  T N L++ +C   ++  A      M   G   D+V++ +L+N +C+   + 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +AL ++  M+  G +P VV YNT+  GL +  QV+ AL L + M  + +  D  TYN+ I
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            GLC SG   +A  +   +   +   ++ ++N LID 
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDA 265



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 4/181 (2%)

Query: 332 ELCKNG----KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           E+ +NG    K+D +  L   M+     P+   ++ L+       K D    L+  M+  
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G  H++ + N L+N +C+   +  ALS   +M+  G +P +VT+ +L  G     ++  A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L +FD M       +   YN  IDGLCKS  V  AL+L   +       + V+YN LI G
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230

Query: 508 L 508
           L
Sbjct: 231 L 231


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/433 (35%), Positives = 236/433 (54%), Gaps = 24/433 (5%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +L+  P  P V  FN L   L + +  D    LF  +  +G   D+ T++IL+   CK+ 
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 157 RVSHGF--VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE---PD 211
           R+   +  V L R    C +PN VTF++LI+GLC   R+ +A  ++   R+ A E   P+
Sbjct: 360 RIPEAYRHVELMRRTEGC-SPNVVTFSTLIQGLCNAGRVNQAWEVY--ERMVAVEGISPN 416

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMAN----GNGEFGV-----------VCKPNTVTY 256
            FTY  L+ GLC+ G +      FE+M       +  + +           VC+P  VTY
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT++ GL K G V  A  L   M +  ++PDV+T+ SV+ G C      +A  +F   ++
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G +P+VVT+S ++D L K  KMD+A +LL  M+  G   NT TY+T++DG     +++ 
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  +   M   GC+ D V+YNTLI+ + K + + EA+ L  EML  G  P+VVTY TL  
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYE 495
           GL    + + A+++ D M     A +  TY++ +DGLCK+G V EAL  F  + RD    
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716

Query: 496 LNIVSYNCLIDGL 508
            ++++Y+ LIDGL
Sbjct: 717 PHVIAYSALIDGL 729



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 212/421 (50%), Gaps = 10/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + ++M+    SP  V +FN +   L K +      ++FKR    G  P++ T+S L
Sbjct: 491 DALGLLEFMIESGLSPD-VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 549

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+   KM ++     +L +++      N VT+++++ GL    R+ +A  +  + R   C
Sbjct: 550 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 609

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TYNTLI+G  +      A+ L  EM     E G    P+ VTY T+  GLC+ G 
Sbjct: 610 LPDAVTYNTLIDGFFKRQRLREAVGLLREML----EAGF--HPSVVTYTTLCHGLCRSGR 663

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQPDVVTFS 327
            D+A E+   M      P+ +TY+S++ G C A    EA   F +M  D+ V P V+ +S
Sbjct: 664 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LCK G++D+A   LE MI  G  P+  T++ LI+G C   +ID   +LF  M   
Sbjct: 724 ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D+ +YN +IN YC   +   A +L  EM + GI    VT+  +   L    +++ A
Sbjct: 784 GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  F  +  +    D  +YN  I  L  S    +ALEL RA+       +  +Y  ++DG
Sbjct: 844 VSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901

Query: 508 L 508
           L
Sbjct: 902 L 902



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 215/456 (47%), Gaps = 46/456 (10%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EAL +   M+ +      V+   ++ G L   +  D V+ L +++  AG  PD  T++ 
Sbjct: 560  DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL-RQMRDAGCLPDAVTYNT 618

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI+ F K  R+     +L  +L + F P+ VT+T+L  GLC   R  EA  +        
Sbjct: 619  LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C P+  TY+++++GLC+ G    AL  FE+MA        V  P+ + Y+ +IDGLCK G
Sbjct: 679  CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE-----VVAPHVIAYSALIDGLCKAG 733

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +D+A E   +M      PDVVT++ +I G C A   +    LF  M ++G + D+  ++
Sbjct: 734  RIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYN 793

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +++  C  G+   A  LLE M   G+  NT T+  +I   C  D+ID A   F S+  +
Sbjct: 794  AMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED 853

Query: 388  GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                D +SYNTLI     ++  E+AL L   M++ G  P    Y T+  GLF+    E A
Sbjct: 854  --CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA 911

Query: 448  LKLFDEMR-----------------------------------RNHVAADTYTYNNFIDG 472
             KL  EMR                                   R ++  D   Y++ ID 
Sbjct: 912  AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDA 971

Query: 473  LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             CK+  V +A +L R+   S  E  I  Y+ ++D L
Sbjct: 972  FCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSL 1004



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 222/450 (49%), Gaps = 37/450 (8%)

Query: 84  LITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           L+    A   F  + RM  +  PP + +F ++   L K    +    +   +   G  PD
Sbjct: 81  LLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPD 140

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +  H++L++  C++GRV   +    ++L   FTP+AVT+ +++ GL    R+  A  +  
Sbjct: 141 VEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQ 200

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                   P VFT+   ++GL + G+   A   F+ M     + GV   PNTVTY+ +ID
Sbjct: 201 LLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMP----QTGV--SPNTVTYDALID 254

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLCK G +D A  L   ++D+N    +  ++S++ G C A+   EA +L   M      P
Sbjct: 255 GLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVP 308

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA-RKL 380
           +VV F+ +M+ LC+  ++D+A  L ++M   G + +  TYN L+ G C   +I  A R +
Sbjct: 309 NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHV 368

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS-KGIKPTVVTYNTLFLGLF 439
            +   + GC  +VV+++TLI   C    V +A  +Y  M++ +GI P   TY  L  GL 
Sbjct: 369 ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLC 428

Query: 440 EIHQVERALKLFDEM-RRNHVAADTY--------------------TYNNFIDGLCKSGF 478
           +     R  + F++M  R   ++ ++                    TYN  + GL KSG 
Sbjct: 429 KAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGM 488

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V +AL L   + +S    +++++N ++DGL
Sbjct: 489 VRDALGLLEFMIESGLSPDVITFNSVLDGL 518



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 197/403 (48%), Gaps = 17/403 (4%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N+L   L K        + F++    G  P + T+S +I+  C+   V  G  +L  +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PNAVT+ +L+  L  + R  EA +L  +     C P++ T+  +I GLC+ G  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  + +EM +     G V  P+   +  ++  LC+ G VD+A   F ++      PD 
Sbjct: 123 EAAFRVVDEMVD----RGFV--PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY +++ G   A     A  +   + +    P V TF++ +D L K G +  A    + 
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   GV+PNT TY+ LIDG C   K+D A  L     S   M    ++++L++  C+   
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMF---AFSSLLHGLCQAHR 293

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +EEA+ L   M      P VV +N+L  GL +  +V+ A +LFD M+ +  +AD  TYN 
Sbjct: 294 LEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNI 350

Query: 469 FIDGLCKSGFVLEA---LELFRAIRDSKYELNIVSYNCLIDGL 508
            + GLCK   + EA   +EL R  R      N+V+++ LI GL
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMR--RTEGCSPNVVTFSTLIQGL 391



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 199/406 (49%), Gaps = 14/406 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L ++   D    L + +   G  P+  T++ L+N     GR    F +
Sbjct: 34  PTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSL 93

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+  +   P  +TF  +IKGLC E  I  A  +  +       PDV  +  L++ LC 
Sbjct: 94  LERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCE 153

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A   F+++        +   P+ VTYNT++DGL K G ++ A  +   + +   
Sbjct: 154 LGRVDEAWFFFQQV------LLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFS 207

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P V T+T  + G   A +   A   F  M   GV P+ VT+  ++D LCK GK+D A  
Sbjct: 208 SPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIA-- 265

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L L+  +      + +++L+ G C   +++ A +L  +M    C+ +VV +N+L+N  C
Sbjct: 266 -LGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLC 321

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH-VAADT 463
           + + V+EA  L+  M   G    V+TYN L  GL ++ ++  A +  + MRR    + + 
Sbjct: 322 QARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNV 381

Query: 464 YTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDGL 508
            T++  I GLC +G V +A E++ R +       N  +Y  L++GL
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGL 427



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 181/366 (49%), Gaps = 47/366 (12%)

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           VT+  LI GLC   R+ +A   F K   F   P V TY+T+I+GLCR         L EE
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           MA G G     C PN VTYNT+++ L  +G   +A  L  +M      P+++T+  +I+G
Sbjct: 62  MA-GRG-----CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKG 115

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C   +   A R+  EM+D+G  PDV   +V++  LC+ G++D+A    + ++  G  P+
Sbjct: 116 LCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD 175

Query: 358 TYTYNTLIDG--------------------------YCLTDKID---------HARKLFV 382
             TYNT++DG                          +  T  +D          A + F 
Sbjct: 176 AVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           SM   G   + V+Y+ LI+  CK   ++ AL L  +   K  +  +  +++L  GL + H
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAH 292

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++E A++L   M       +   +N+ ++GLC++  V EA ELF  +++S    ++++YN
Sbjct: 293 RLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYN 349

Query: 503 CLIDGL 508
            L+ GL
Sbjct: 350 ILLKGL 355



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 189/396 (47%), Gaps = 32/396 (8%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHS 146
            +EA+ I DYM     +P  ++  +I+ G L K       L  F+++    +  P +  +S
Sbjct: 665  DEAVEILDYMAARGCAPNAITYSSIVDG-LCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
             LI+  CK GR+   +  L R++R+   P+ VTF+ LI GLC   RI     LF      
Sbjct: 724  ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-----ANGNGEFGVVCKP---------- 251
             C+ D++ YN +IN  C  G    A  L EEM     A      G+V K           
Sbjct: 784  GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 252  ------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                        + ++YNT+I  L      ++A EL   M  +  +PD   Y +V+ G  
Sbjct: 844  VSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903

Query: 300  YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
             A     A +L  EM  +G  PD+ T+++++  L K  ++  A    E M+ + + P+  
Sbjct: 904  KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAI 963

Query: 360  TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
             Y++LID +C  DK+D A KL   + S+G    +  Y+T+++  CKN+  ++AL +  EM
Sbjct: 964  VYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020

Query: 420  LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
             SK  +P +  + +L        +V+ A+KL ++++
Sbjct: 1021 KSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 115/221 (52%)

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           +VTY  +I G C A    +A   F + +  G +P VVT+S ++D LC++ ++DK  +LLE
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  RG  PN  TYNTL++      +   A  L   M +NGC  +++++  +I   CK  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++E A  +  EM+ +G  P V  +  L   L E+ +V+ A   F ++       D  TYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DGL K+G +  A  + + + +S     + ++   +DGL
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/426 (34%), Positives = 229/426 (53%), Gaps = 21/426 (4%)

Query: 97  MLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           ML  H +P P +  F  + G L K  HY  V+SL +++   GL  ++ T SILINC+ ++
Sbjct: 1   MLLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQL 60

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+ +  F V   IL+  +  +A+TFT+LIKGLC +  I +A     K      + +  +Y
Sbjct: 61  GQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSY 120

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            TLINGLC+ G T  AL     +       G + +P+ V YNTIIDGLCK+  V+ A  L
Sbjct: 121 GTLINGLCKVGQTRAALEFLRRID------GKLVQPDVVMYNTIIDGLCKDKLVNDAFNL 174

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           + +M  + I P VVTY ++I G C      +A  L  +M+ + + P V TFS+++D  CK
Sbjct: 175 YFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCK 234

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD--------------KIDHARKLF 381
            GKM +A  +  +M+   V PN  TYN+L+DG+ L +               +D A  LF
Sbjct: 235 EGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLF 294

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M       D+V YN+LI+  CK+     AL    EM  +G  P + TYN+L   L + 
Sbjct: 295 EEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKN 354

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
           + V++A++L  +++   +     TYN  I+GLCKSG + +A ++F  +    Y  ++ +Y
Sbjct: 355 YHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTY 414

Query: 502 NCLIDG 507
           N +I G
Sbjct: 415 NAMIKG 420



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 180/360 (50%), Gaps = 21/360 (5%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K       L   +R++   + PD+  ++ +I+  CK   V+  F +   +
Sbjct: 119 SYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEM 178

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P+ VT+ +LI GLC  +++ +A  L  K  +    P V+T++ LI+  C+ G  
Sbjct: 179 VAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKM 238

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF---LKMKDENIN 285
             A N+F  M   +       KPN VTYN+++DG      V KAK +F   +KM DE +N
Sbjct: 239 KEAKNVFAVMMKED------VKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMN 292

Query: 286 -----------PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
                      PD+V Y S+I G C +     A +   EM  +G  PD+ T++ ++D LC
Sbjct: 293 LFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALC 352

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           KN  +DKA  LL  +  +G+ P+  TYN LI+G C + ++  A K+F  +   G   DV 
Sbjct: 353 KNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVY 412

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +YN +I  +CK    +E L++ S+M   G  P       +   LF+  + ++A K F EM
Sbjct: 413 TYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREM 471



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 22/350 (6%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           TP+   F  ++  L   +      +L  +        ++ T + LIN   + G   ++ +
Sbjct: 9   TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68

Query: 234 LFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +F   +  G G        + +T+ T+I GLC +G + KA     K+  +    + V+Y 
Sbjct: 69  VFANILKKGYGS-------DAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G C       A      +  + VQPDVV ++ I+D LCK+  ++ A  L   M+ +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            + P+  TYNTLI G C+  ++  A  L   M        V +++ LI+ +CK   ++EA
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLG------------LFE--IHQVERALKLFDEMRRNH 458
            ++++ M+ + +KP +VTYN+L  G            +F   I  V+ A+ LF+EM    
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  D   YN+ IDGLCKSG    AL+    +       +I +YN L+D L
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDAL 351



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 44/292 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L         + L  ++    + P +YT SILI+ FCK G++     V
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 165 LGRILRSCFTPNAVTFTSLIKG-----LCAESR---------IMEAAALFTKHRVFACEP 210
              +++    PN VT+ SL+ G     +  +++         + EA  LF +       P
Sbjct: 245 FAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYP 304

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMA---------NGNGEFGVVCK----------- 250
           D+  YN+LI+GLC++G T  AL    EM            N     +CK           
Sbjct: 305 DMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELL 364

Query: 251 ---------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                    P+  TYN +I+GLCK G +  A+++F  +  +  N DV TY ++I+GFC  
Sbjct: 365 TKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKK 424

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
             ++E   +  +M D G  PD     +I+  L   G+ DKA +  E MI RG
Sbjct: 425 GLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFRE-MIVRG 475



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 63/139 (45%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
            PP + ++N L   L KN H D  + L  +L   G+ P + T++ILIN  CK GR+    
Sbjct: 337 QPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAE 396

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   +L   +  +  T+ ++IKG C +    E  A+ +K +   C PD      +I  L
Sbjct: 397 KVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSL 456

Query: 223 CRTGHTIVALNLFEEMANG 241
              G    A    E +  G
Sbjct: 457 FDKGENDKAGKFREMIVRG 475


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 229/433 (52%), Gaps = 29/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ PD  T++ +++ +C  G+       
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      PN VT++SL+  LC   R  EA  +F        EPD+ TY TL+ G   
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 225 TG-----HTIVALNLFEEMANGNGEFGV-VCK-----------------------PNTVT 255
            G     H ++ L +   +   +  F + +C                        PN V 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y T+ID LCK G VD A   F +M DE + P+++ YTS+I G C  + W++A+ L +EM+
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D+G+  + + F+ I+D  CK G++ ++ +L +LM+  GV P+  TYNTLIDG CL  K+D
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL  SM S G   D+V+Y TLIN YC+   +++AL+L+ EM+S G+ P ++TYN + 
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GLF   +   A +L+  + ++    +  TYN  + GLCK+    EAL +F+ +  +  +
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 496 LNIVSYNCLIDGL 508
           L   ++N +I  L
Sbjct: 654 LETRTFNIMIGAL 666



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 225/424 (53%), Gaps = 9/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P ++T+
Sbjct: 38  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 95

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILI C C+ GR+  GF  LG +++  F  +A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C PDVF+YN L+ GLC    +  AL L   MA+  G       P+ V+YNT+++G  
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYNTVLNGFF 212

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG  DKA   + +M D  I PDVVTY+S+I   C A   ++A  +   M+  GV PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV PN  TY++L++  C   +   ARK+F SM
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   D+ +Y TL+  Y     + E  +L   M+  GI+P    +N L     +  +V
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR++ +  +   Y   ID LCKSG V +A+  F  + D     NI+ Y  L
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 505 IDGL 508
           I GL
Sbjct: 453 IHGL 456



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 215/446 (48%), Gaps = 37/446 (8%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           SSGQ       P EA+     M R     P V +++ L   L KN        +F  +  
Sbjct: 283 SSGQ-------PKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            GL PDI T+  L+  +   G +     +L  ++R+   P+   F  LI     + ++ +
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 248
           A  +F+K R     P+V  Y T+I+ LC++G    A+  FE+M +      ++       
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454

Query: 249 ----CKP------------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               C                    NT+ +N+IID  CKEG V ++++LF  M    + P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D++TY ++I G C A   +EA +L   M+  GV+PD+VT+  +++  C+  +MD A  L 
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+  GV+PN  TYN ++ G   T +   A++L+VS+  +G   ++ +YN +++  CKN
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              +EAL ++  +    ++    T+N +   L +  +++ A  LF     N +  D  TY
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDS 492
           +   + L + G + E  +LF ++ ++
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEEN 720



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 203/422 (48%), Gaps = 15/422 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           E   + D M+R +   P    FNIL    AK +  D  + +F ++   GL P++  +  +
Sbjct: 359 EMHALLDLMVR-NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G V    +   +++    TPN + +TSLI GLC   +  +A  L  +      
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             +   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TYNT+IDG C  G 
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYNTLIDGCCLAGK 531

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A +L   M    + PD+VTY ++I G+C  +  ++A  LF EM+  GV P+++T+++
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  L    +   A  L   +   G      TYN ++ G C  +  D A ++F     N 
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF----QNL 647

Query: 389 CMHDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           C+ D+     ++N +I    K   ++EA  L++   + G+ P V TY+ +   L E   +
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E    LF  M  N  +AD+   N+ +  L + G +  A      I +  + L   + + L
Sbjct: 708 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFL 767

Query: 505 ID 506
           ++
Sbjct: 768 LE 769


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 229/433 (52%), Gaps = 29/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ PD  T++ +++ +C  G+       
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      PN VT++SL+  LC   R  EA  +F        EPD+ TY TL+ G   
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 225 TG-----HTIVALNLFEEMANGNGEFGV-VC-----------------------KPNTVT 255
            G     H ++ L +   +   +  F + +C                        PN V 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y T+ID LCK G VD A   F +M DE + P+++ YTS+I G C  + W++A+ L +EM+
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D+G+  + + F+ I+D  CK G++ ++ +L +LM+  GV P+  TYNTLIDG CL  K+D
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL  SM S G   D+V+Y TLIN YC+   +++AL+L+ EM+S G+ P ++TYN + 
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GLF   +   A +L+  + ++    +  TYN  + GLCK+    EAL +F+ +  +  +
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 496 LNIVSYNCLIDGL 508
           L   ++N +I  L
Sbjct: 654 LETRTFNIMIGAL 666



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 225/424 (53%), Gaps = 9/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P ++T+
Sbjct: 38  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 95

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILI C C+ GR+  GF  LG +++  F  +A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C PDVF+YN L+ GLC    +  AL L   MA+  G       P+ V+YNT+++G  
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYNTVLNGFF 212

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG  DKA   + +M D  I PDVVTY+S+I   C A   ++A  +   M+  GV PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV PN  TY++L++  C   +   ARK+F SM
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   D+ +Y TL+  Y     + E  +L   M+  GI+P    +N L     +  +V
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR++ +  +   Y   ID LCKSG V +A+  F  + D     NI+ Y  L
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 505 IDGL 508
           I GL
Sbjct: 453 IHGL 456



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 215/446 (48%), Gaps = 37/446 (8%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           SSGQ       P EA+     M R     P V +++ L   L KN        +F  +  
Sbjct: 283 SSGQ-------PKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            GL PDI T+  L+  +   G +     +L  ++R+   P+   F  LI     + ++ +
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 248
           A  +F+K R     P+V  Y T+I+ LC++G    A+  FE+M +      ++       
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454

Query: 249 ----CKP------------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               C                    NT+ +N+IID  CKEG V ++++LF  M    + P
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D++TY ++I G C A   +EA +L   M+  GV+PD+VT+  +++  C+  +MD A  L 
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+  GV+PN  TYN ++ G   T +   A++L+VS+  +G   ++ +YN +++  CKN
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              +EAL ++  +    ++    T+N +   L +  +++ A  LF     N +  D  TY
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDS 492
           +   + L + G + E  +LF ++ ++
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEEN 720



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 201/418 (48%), Gaps = 7/418 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           E   + D M+R +   P    FNIL    AK +  D  + +F ++   GL P++  +  +
Sbjct: 359 EMHALLDLMVR-NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G V    +   +++    TPN + +TSLI GLC   +  +A  L  +      
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             +   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TYNT+IDG C  G 
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYNTLIDGCCLAGK 531

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A +L   M    + PD+VTY ++I G+C  +  ++A  LF EM+  GV P+++T+++
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  L    +   A  L   +   G      TYN ++ G C  +  D A ++F ++    
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +  ++N +I    K   ++EA  L++   + G+ P V TY+ +   L E   +E   
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            LF  M  N  +AD+   N+ +  L + G +  A      I +  + L   + + L++
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 155/454 (34%), Positives = 237/454 (52%), Gaps = 21/454 (4%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK------ 119
           L++ +  R +S   G       ++AL +FD +L  H  P  + +FN L   +++      
Sbjct: 15  LERVIGSRARSGSLG------LDDALKLFDGLL-THARPASIIAFNHLLTAVSRVSGRRS 67

Query: 120 -NKHYDTVLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
                + V+SLF R+    +  + PD+ T+SILI CFC+MGR+ HGF   G IL+S +  
Sbjct: 68  STTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV 127

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNL 234
           N +    L+KGLC   R+ EA  +  K      C PDV +YNTL+ G C       AL L
Sbjct: 128 NNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
              MA+  G     C PN V+Y T+I+G   EG VDKA  LFL+M D  I P+VVTYT+V
Sbjct: 188 LHMMADSQGR---SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTV 244

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C A   + A+ +F +M+D+GV+PD  T++ ++      GK  +  R+LE M   G+
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL 304

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+ YTY +L++  C   +   AR  F SM   G   +V  Y  LI+ Y     + E   
Sbjct: 305 KPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHD 364

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L + M+  G+ P    +N +F    +   ++ A+ +F++M++  ++ D   +   ID LC
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALC 424

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G V +A+  F  + +     NI  +N L+ GL
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +F  M+     P   +   ++ G L+  K +  V+ + + +++ GL PD YT+  
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  C  GR          ++R    PN   +  LI G   +  + E   L        
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N +     +      A+++F +M            P+ V +  +ID LCK G
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG------LSPDVVNFGALIDALCKLG 427

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F +M +E + P++  + S++ G C  + W +AK  + EM++QG++PDVV F+
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+  LC  G++ KA RL++LM   G  P+  +Y TLI G+CL  +ID A K    M S 
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D  +YNTL++ YC+   +++A  ++ EML  GI P VVTY+T+  GLF   +   A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M  +    + + YN  ++GL K+  V EA +LF+++    ++L I ++N +I  
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667

Query: 508 L 508
           L
Sbjct: 668 L 668



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 202/417 (48%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   FD M+R     P V+ + IL    A       +  L   +   GL PD +  +I+
Sbjct: 326 EARFFFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
              + K   +     +  ++ +   +P+ V F +LI  LC   R+ +A   F +      
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++F +N+L+ GLC       A   + EM N         +P+ V +NTI+  LC +G 
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG------IRPDVVFFNTILCNLCTKGQ 498

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V KA+ L   M+     PDV++YT++I G C     +EA +    M+  G++PD  T++ 
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ G++D A  +   M+  G+ P   TY+T++ G   T +   A++L+++M ++G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++  YN ++N   KN  V+EA  L+  + SK  +  + T+N +   LF+  + E A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  +    +  D +TY    + L + G++ E  +LF A+  S    N    N L+
Sbjct: 679 HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FNI+F   AK    D  + +F ++   GL PD+     LI+  CK+GRV    + 
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN   F SL+ GLC   +  +A   + +       PDV  +NT++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L + M        V  +P+ ++Y T+I G C  G +D+A +    M    +
Sbjct: 496 KGQVMKAQRLIDLMER------VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY +++ G+C A   ++A  +F EM+  G+ P VVT+S I+  L    +  +A  
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI  G   N + YN +++G    + +D A KLF S+ S     ++ ++N +I    
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALF 669

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+   E+A+ L++ + S G+ P V TY  +   L E   +E    LF  M ++    ++ 
Sbjct: 670 KSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR 729

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             N  +  L   G +  A      + +  + L   +   LI
Sbjct: 730 MLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 268/538 (49%), Gaps = 47/538 (8%)

Query: 4   VSSTRSFHFTSISISALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTV--K 61
           V S   FH T   +S    + S S P    P SS+S +      T S+ +   R++   K
Sbjct: 10  VCSFHHFHITRARVS----DNSISRPFVLYPDSSVSHHFSKLKATRSRKRLENRVSAVSK 65

Query: 62  DRASLKKFLKERCKSSGQGDINLI----TP---------------------------NEA 90
             AS      ++  S+  GD+N+I    +P                            E 
Sbjct: 66  SEASGLNGRLQQIVSTPNGDLNVIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEG 125

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           L   + M+     P  ++  +++ G   ++        + + L ++G  PD+ T+++LI 
Sbjct: 126 LKFLERMIYQGDIPDVIACTSLIRG-FCRSGKTKKATRIMEILENSGAVPDVITYNVLIG 184

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +CK G +     VL R+      P+ VT+ ++++ LC   ++ EA  +  +     C P
Sbjct: 185 GYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP 241

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           DV TY  LI   C       A+ L +EM          CKP+ VTYN +I+G+CKEG +D
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKG------CKPDVVTYNVLINGICKEGRLD 295

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +    M      P+V+T+  ++R  C    W +A+RL  +M+ +G  P VVTF++++
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           + LC+   + +A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC 
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 415

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D+V+YNTL+   CK+  V+ A+ + +++ SKG  P ++TYNT+  GL ++ + E A++L
Sbjct: 416 PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVEL 475

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +EMRR  +  D  TY+  + GL + G V EA+++F  +     + + V+YN ++ GL
Sbjct: 476 LEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 213/405 (52%), Gaps = 11/405 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L G   K+   D  L + +R++ A   PD+ T++ ++   C  G++     V
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEV 230

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L R L R C+ P+ +T+T LI+  C +S + +A  L  + R   C+PDV TYN LING+C
Sbjct: 231 LDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+     M +    +G  CKPN +T+N I+  +C  G    A+ L   M  + 
Sbjct: 290 KEGRLDEAIKFLNNMPS----YG--CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P VVT+  +I   C       A  +  +M   G  P+ ++++ ++   C+  KMD+A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             LE+M+ RG  P+  TYNTL+   C   K+D A ++   + S GC   +++YNT+I+  
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K    E A+ L  EM  KG+KP ++TY+TL  GL    +V+ A+K+F +M    +    
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  + GLCK+     A++    + +   +    +Y  LI+G+
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 166/360 (46%), Gaps = 23/360 (6%)

Query: 49  TSKLKESL--------RLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRM 100
           + KLKE++        R    D  +    ++  C  SG G        +A+ + D M R 
Sbjct: 221 SGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVG--------QAMKLLDEM-RK 271

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
               P V ++N+L   + K    D  +     + S G  P++ TH+I++   C  GR   
Sbjct: 272 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMD 331

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L  +LR   +P+ VTF  LI  LC +  +  A  +  K     C P+  +YN L++
Sbjct: 332 AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C+      A+   E M +        C P+ VTYNT++  LCK+G VD A E+  ++ 
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRG------CYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +  +P ++TY +VI G         A  L  EM  +G++PD++T+S ++  L + GK+D
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A ++   M    + P+  TYN ++ G C   +   A      M   GC     +Y  LI
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/451 (32%), Positives = 241/451 (53%), Gaps = 22/451 (4%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D ++   ++   C++S  GD        A  +FD M R H   P   ++N L   L    
Sbjct: 49  DISTFNIYISGLCRASRIGD--------AQTVFDGM-RKHGFWPNRITYNALLSGLCNGG 99

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                 +L++R+  AG  PD+ T++ L++ FCK+G++     +    ++  F P+ VT+ 
Sbjct: 100 RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYN 159

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +LI G C   ++ EA  +  +    +  PDV TYN+L+NGLC+ G    A  L  +    
Sbjct: 160 ALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG-- 217

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                    PN +TY+T+I GLC+E   ++ A++L  KM      PD+V+Y ++I G   
Sbjct: 218 -------FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAR 270

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
               +EA +LF  ++ QG +P+V T+++++D L K  ++++A  L   ++  G+ P+  T
Sbjct: 271 EQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAIT 330

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y   IDG C   +++ A  +   M+  GC+ DVVS+N +IN  CK K V+EA  L S M 
Sbjct: 331 YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 390

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS---G 477
           +KG  P  +++NTL  G     + ++A+  F EM +  V     TYN  +DGLCK+   G
Sbjct: 391 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 450

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + EA+ LF A+ +     ++V+Y+ LIDGL
Sbjct: 451 RIKEAITLFDAMIEKGRVPDVVTYSALIDGL 481



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 150/426 (35%), Positives = 232/426 (54%), Gaps = 16/426 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +++ M++   SP  V ++N L     K    D  L +F      G  PD+ T++ 
Sbjct: 102 SDAQALYERMIKAGYSPD-VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNA 160

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN FCK  ++     +L R++     P+ VT+ SL+ GLC   R+ EA  L        
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---G 217

Query: 208 CEPDVFTYNTLINGLCRTGHTI-VALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCK 265
             P+V TY+TLI+GLCR    +  A  L E+M  NG       CKP+ V+YN +I GL +
Sbjct: 218 FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG-------CKPDIVSYNALIHGLAR 270

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           E  V +A +LF  +  +   P+V TY  +I G    +  NEA  LF  ++  G++PD +T
Sbjct: 271 EQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAIT 330

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++V +D LCK G+++ A  +L+ M  +G  P+  ++N +I+G C   ++D A  L   ME
Sbjct: 331 YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 390

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ-- 443
           + GC  + +S+NTLI   C+    ++A++ + EML +G+KPTVVTYN L  GL +  Q  
Sbjct: 391 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 450

Query: 444 -VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            ++ A+ LFD M       D  TY+  IDGL K+G + +A  L  A+       N+ +YN
Sbjct: 451 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 510

Query: 503 CLIDGL 508
            LI GL
Sbjct: 511 SLISGL 516



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/425 (35%), Positives = 227/425 (53%), Gaps = 14/425 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL IFD  ++     P V ++N L     K    D    + +R+ S  L PD+ T++ 
Sbjct: 137 DEALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKHRVF 206
           L+N  CK GRV    ++   I+   F+PN +T+++LI GLC E R +E+A  L  K  + 
Sbjct: 196 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C+PD+ +YN LI+GL R      AL LF  +     E      P   TYN +IDGL KE
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE------PEVPTYNILIDGLLKE 306

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V++A ELF  +    + PD +TYT  I G C A    +A  +  +M ++G  PDVV+ 
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + +++ LCK  ++D+A  LL  M  +G +PN  ++NTLI G C   K   A   F  M  
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 387 NGCMHDVVSYNTLINWYCKNKD---VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
            G    VV+YN L++  CK +    ++EA++L+  M+ KG  P VVTY+ L  GL +  +
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           ++ A +L   M       + YTYN+ I GLC    V EALELF A+ +     + ++Y  
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 504 LIDGL 508
           +I  L
Sbjct: 547 IISAL 551



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 212/372 (56%), Gaps = 15/372 (4%)

Query: 140 PDIYTHSILINCFCKMGRV--SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           PD YT  IL+    K G++  +H FV    +   C   +  TF   I GLC  SRI +A 
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC---DISTFNIYISGLCRASRIGDAQ 70

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            +F   R     P+  TYN L++GLC  G    A  L+E M            P+ VTYN
Sbjct: 71  TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG------YSPDVVTYN 124

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T++ G CK G +D+A ++F         PDVVTY ++I GFC A+  +EA+R+   M+ +
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE 184

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT-DKIDH 376
            + PDVVT++ +++ LCKNG++D+A  L+   + +G +PN  TY+TLI G C    +++ 
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLES 241

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           AR+L   M  NGC  D+VSYN LI+   + + V EAL L+  +L +G +P V TYN L  
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  +V  A +LF  + ++ +  D  TY  FIDGLCK+G V +AL + + + +     
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361

Query: 497 NIVSYNCLIDGL 508
           ++VS+N +I+GL
Sbjct: 362 DVVSHNAVINGL 373



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 214/388 (55%), Gaps = 9/388 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP  ++   ++ G   + +  ++   L +++   G  PDI +++ LI+   +   VS   
Sbjct: 219 SPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEAL 278

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            + G +LR  + P   T+  LI GL  E R+ EA  LF+       EPD  TY   I+GL
Sbjct: 279 KLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 338

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    AL + ++M          C P+ V++N +I+GLCKE  VD+A+ L   M+ +
Sbjct: 339 CKAGRVEDALLMLKDMDEKG------CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK---NGKM 339
             +P+ +++ ++I G C A  W +A   F EM+ +GV+P VVT+++++D LCK    G++
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A  L + MI +G  P+  TY+ LIDG     K+D AR+L  +ME+ GC+ +V +YN+L
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C    V+EAL L+  M+ KG  P  +TY T+   L +   V++AL LFD      V
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGV 572

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFR 487
              +  Y + IDGLC    V EAL+L +
Sbjct: 573 VPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/387 (34%), Positives = 191/387 (49%), Gaps = 17/387 (4%)

Query: 39  SENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLI-------TPNEAL 91
           S N  +Y T  S L   LR     R  L+K +   CK        LI         +EAL
Sbjct: 219 SPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEAL 278

Query: 92  CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
            +F  +LR     P V ++NIL   L K    +    LF  L   GL PD  T+++ I+ 
Sbjct: 279 KLFGSVLR-QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 337

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            CK GRV    ++L  +      P+ V+  ++I GLC E R+ EA  L +      C P+
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK---EGF 268
             ++NTLI G CR G    A+  F+EM     + GV  KP  VTYN ++DGLCK   EG 
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEML----KRGV--KPTVVTYNILVDGLCKARQEGR 451

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A  LF  M ++   PDVVTY+++I G   A   ++A+RL   M  +G  P+V T++ 
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC   K+D+A  L   M+ +G  P+T TY T+I   C  + +D A  LF      G
Sbjct: 512 LISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSL 415
            +     Y +LI+  C    V+EAL L
Sbjct: 572 VVPTSGMYFSLIDGLCAVARVDEALKL 598


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/456 (34%), Positives = 240/456 (52%), Gaps = 37/456 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT---VLSLFKRL---NSAGLFPD 141
           ++AL +FD +L +H  P  V + N L   +++ K   +    +S F R+    S  + PD
Sbjct: 25  HDALKLFDELL-LHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALF 200
             T+SI+I CFC++GR+  GF   G IL++ +  + +    L+KGLC   R+ EA   L 
Sbjct: 84  CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG----------------NGE 244
            +     C   V +YNTL+ GLC       A  L   M +G                NG 
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203

Query: 245 F--GVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           F  G V K           P+ VTYNTIIDGLCK   VD+A+++F +M ++ + P+ VTY
Sbjct: 204 FNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I G C A + + A+ +F +M+D+GV+P  VT++ I+D LCK   +D+A  + + MI 
Sbjct: 264 NTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID 323

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           RGV P+  TYNT+IDG C    ID A  +F  M   G   D ++Y  +I+  CK + V+ 
Sbjct: 324 RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDR 383

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  ++ +M+ KG+KP   TYN L  G     Q E  ++   EM  + +  D +TY   +D
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLD 443

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            LCK+G   EA  LF ++     + ++  Y  ++ G
Sbjct: 444 YLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 241/485 (49%), Gaps = 65/485 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +F  M+     P  V+ +N +   L K +  D    +F+++   G+ PD  T++I
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVT-YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   V     V  +++     PN  T+  LI G  +  +  E      +     
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEE---------------MANGNGEFG------ 246
            EPDVFTY  L++ LC+ G    A +LF+                M +G G+ G      
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 247 --------------------VVC-----------------------KPNTVTYNTIIDGL 263
                               V+C                        PN VTY T+ID L
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G VD A   F +M +E + P+ V + S++ G C  + W + + LF+EM++QG++PD+
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V F+ ++  LCK G++ +A RL++ M+  G+ P+  +YNTLIDG+C   ++D A KL   
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S G   ++VSYNTL++ YCK   ++ A  L+ EML KG+ P V TYNT+  GLF   +
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
              A +L+  M ++       TY+  +DG CK+    EA ++F+++     +L+I+++N 
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 504 LIDGL 508
           +IDGL
Sbjct: 791 MIDGL 795



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 221/418 (52%), Gaps = 15/418 (3%)

Query: 97  MLRMHPSPP---PVSSFNILFGCLAKNKHYDTVLSLFKRL---NSAGLFPDIYTHSILIN 150
           +LR  P       V S+N L   L   +  +    L   +     +   PD+ +++I+IN
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            F   G+V   + +    L    +P+ VT+ ++I GLC    +  A  +F +      +P
Sbjct: 202 GFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +  TYNT+I+GLC+     +A  +F++M +     GV  KP+ VTYNTIIDGLCK   VD
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK----GV--KPSNVTYNTIIDGLCKAQAVD 312

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A+ +F +M D  + PD VTY ++I G C A   ++A+ +F +M+D+GV+PD +T+++I+
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK   +D+A  + + MI +GV PN  TYN LI GY  T + +   +    M ++   
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DV +Y  L+++ CKN    EA SL+  M+ KGIKP+V  Y  +  G  +   +     L
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + M  N ++ +   +N  I    K   + E + +F  ++      N+V+Y  LID L
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 230/473 (48%), Gaps = 79/473 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NI+          D   SLF  +   G+ PD+ T++ +I+  CK   V     V
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDV 247

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN VT+ ++I GLC    +  A  +F K      +P   TYNT+I+GLC+
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +F++M     + GV  KP+ VTYNTIIDGLCK   +DKA+ +F +M D+ +
Sbjct: 308 AQAVDRAEGVFQQMI----DRGV--KPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV------------------------- 319
            PD +TYT +I G C A   + A+ +F +M+D+GV                         
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421

Query: 320 ----------QPDVVTFSVIMDELCKNGKMDKASR------------------------- 344
                     +PDV T+ +++D LCKNGK ++A                           
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 345 ----------LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
                     LL LM+  G++PN   +NT+I  Y     ID    +F+ M+  G   +VV
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y TLI+  CK   V++A+  +++M+++G+ P  V +N+L  GL  + + E+  +LF EM
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               +  D   +N  +  LCK G V+EA  L  ++     + +++SYN LIDG
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 214/408 (52%), Gaps = 6/408 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V ++ +L   L KN   +   SLF  +   G+ P +  + I+++ + K G +S 
Sbjct: 429 HDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSE 488

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L  ++ +  +PN   F ++I      + I E   +F K +     P+V TY TLI+
Sbjct: 489 MHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LC+ G    A+  F +M N     GV   PN V +N+++ GLC     +K +ELFL+M 
Sbjct: 549 ALCKLGRVDDAVLQFNQMINE----GVT--PNNVVFNSLVYGLCTVDKWEKVEELFLEML 602

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           ++ I PD+V + +V+   C      EA+RL   M+  G++PDV++++ ++D  C   +MD
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A +LL+ M+  G+ PN  +YNTL+ GYC   +ID+A  LF  M   G    V +YNT++
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N   ++    EA  LY  M+      ++ TY+ +  G  + +  + A K+F  +    + 
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D  T+N  IDGL K G   +A++LF AI  +    ++V+Y  + + L
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 204/404 (50%), Gaps = 12/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FN +    AK    D V+ +F ++   GL P++ T+  LI+  CK+GRV    + 
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++    TPN V F SL+ GLC   +  +   LF +       PD+  +NT++  LC+
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC---KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            G  + A  L + M         VC   KP+ ++YNT+IDG C    +D+A +L   M  
Sbjct: 623 EGRVMEARRLIDSM---------VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             + P++V+Y +++ G+C A   + A  LF EM+ +GV P V T++ I++ L ++G+  +
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L   MI      +  TY+ ++DG+C  +  D A K+F S+ S     D++++N +I+
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              K    E+A+ L++ + + G+ P+VVTY  +   L E   +E    LF  M ++  A 
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +++  N  I  L   G +  A      + +  + L   + + LI
Sbjct: 854 NSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 210/421 (49%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +FD M+R     P V+ + I+     K      +  L   + + G+ P+    + 
Sbjct: 452 NEARSLFDSMIR-KGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I  + K   +     +  ++ +   +PN VT+ +LI  LC   R+ +A   F +     
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+   +N+L+ GLC          LF EM N         +P+ V +NT++  LCKEG
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG------IRPDIVFFNTVLCNLCKEG 624

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+ L   M    + PDV++Y ++I G C+A+  +EA +L   M+  G++P++V+++
Sbjct: 625 RVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYN 684

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK G++D A  L   M+ +GV P   TYNT+++G   + +   AR+L+V+M  +
Sbjct: 685 TLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKS 744

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             +  + +Y+ +++ +CKN   +EA  ++  + S  ++  ++T+N +  GLF+  + E A
Sbjct: 745 RKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDA 804

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + LF  +  N +     TY    + L + G + E   LF  +  S    N    N LI  
Sbjct: 805 MDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRK 864

Query: 508 L 508
           L
Sbjct: 865 L 865



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 6/311 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  FN +   L K         L   +   GL PD+ +++ LI+  C   R+     +
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   PN V++ +L+ G C   RI  A  LF +       P V TYNT++NGL R
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  L+  M      + +       TY+ I+DG CK    D+A ++F  +   ++
Sbjct: 728 SGRFSEARELYVNMIKSRKLWSIC------TYSIILDGFCKNNCFDEAFKIFQSLCSMDL 781

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D++T+  +I G        +A  LF  +   G+ P VVT+ +I + L + G +++   
Sbjct: 782 QLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDC 841

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L  +M   G  PN++  N LI       +I  A      ++      +  + + LI+ + 
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFS 901

Query: 405 KNKDVEEALSL 415
           + +  + A SL
Sbjct: 902 REEYQQHAKSL 912



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 412 ALSLYSEML---SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           A+S ++ ML   S  + P   TY+ +      I ++E     F  + +     D    N 
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 469 FIDGLCKSGFVLEALE-LFRAIRDSKYELNIVSYNCLIDGL 508
            + GLC +  V EA+  L R + +    L +VSYN L+ GL
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGL 165


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/454 (34%), Positives = 236/454 (51%), Gaps = 21/454 (4%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK------ 119
           L++ +  R +S   G       ++AL +FD +L  H  P  V +FN L   +++      
Sbjct: 15  LERVIGSRARSGSLG------LDDALKLFDGLL-THARPASVIAFNHLLTAVSRVSGRRS 67

Query: 120 -NKHYDTVLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
                + V+SLF R+    +  + PD  T+SILI CFC+MGR+ HGF   G IL+S +  
Sbjct: 68  STTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRV 127

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNL 234
           N +    L+KGLC   R+ EA  +  K      C PDV +YNTL+ G C       AL L
Sbjct: 128 NNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
              MA+  G     C PN V+Y  +I+G   EG VDKA  LFL+M D  I P+VVTYT+V
Sbjct: 188 LHMMADSQGR---SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTV 244

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C A   + A+ +F +M+D+GV+PD  T++ ++      GK  +  R+LE M   G+
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL 304

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+ YTY +L++  C   +   AR LF SM   G   +V  Y  LI+ Y     + E   
Sbjct: 305 KPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHD 364

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L + M+  G+ P    +N +F    +   ++ A+ +F++M++  ++ D   Y   ID LC
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALC 424

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G V +A+  F  + +     NI  +N L+ GL
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +F  M+     P   +   ++ G L+  K +  V+ + + +++ GL PD YT+  
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK-WKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  C  GR      +   ++R    PN   +  LI G   +  + E   L        
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N +     +      A+++F +M            P+ V Y  +ID LCK G
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG------LSPDVVNYGALIDALCKLG 427

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F +M +E + P++  + S++ G C  + W +AK  + EM++QG++PDVV F+
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+  LC  G++ KA RL++LM   G  P   +Y TLI G+CL  +ID A K    M S 
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D  +YNTL++ YC+   +++A  ++ EML  GI P VVTY+T+  GLF   +   A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M  +    + + YN  ++GL K+  V EA +LF+++    ++L I ++N +I  
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667

Query: 508 L 508
           L
Sbjct: 668 L 668



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 202/417 (48%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M+R     P V+ + IL    A       +  L   +   GL PD +  +I+
Sbjct: 326 EARFLFDSMIR-KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
              + K   +     +  ++ +   +P+ V + +LI  LC   R+ +A   F +      
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++F +N+L+ GLC       A   + EM N         +P+ V +NTI+  LC +G 
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG------IRPDVVFFNTILCNLCTKGQ 498

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V KA+ L   M+     P V++YT++I G C     +EA +    M+  G++PD  T++ 
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ G++D A  +   M+  G+ P   TY+T++ G   T +   A++L+++M ++G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++  YN ++N   KN  V+EA  L+  + SK  +  + T+N +   LF+  + E A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  +    +  D +TY    + L + G++ E  +LF A+  S    N    N L+
Sbjct: 679 HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 179/378 (47%), Gaps = 6/378 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FNI+F   AK    D  + +F ++   GL PD+  +  LI+  CK+GRV    + 
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN   F SL+ GLC   +  +A   + +       PDV  +NT++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L + M        V  +P  ++Y T+I G C  G +D+A +    M    +
Sbjct: 496 KGQVMKAQRLIDLMER------VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY +++ G+C A   ++A  +F EM+  G+ P VVT+S I+  L    +  +A  
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI  G   N + YN +++G    + +D A KLF S+ S     ++ ++N +I    
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALF 669

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+   E+A+ L++ + S G+ P V TY  +   L E   +E    LF  M ++    ++ 
Sbjct: 670 KSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSR 729

Query: 465 TYNNFIDGLCKSGFVLEA 482
             N  +  L   G +  A
Sbjct: 730 MLNALVRRLLHRGDITRA 747



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 7/254 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M R+  + P V S+  L G        D        + S GL PD +T++ L++ +
Sbjct: 505 LIDLMERV-GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ GR+   + V   +LR+  TP  VT+++++ GL    R  EA  L+        + ++
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNI 623

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           + YN ++NGL +      A  LF+ + + + +  +       T+N +I  L K G  + A
Sbjct: 624 WIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEIT------TFNIMIGALFKSGRNEDA 677

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF  +    + PDV TY  +           E   LF  M   G  P+    + ++  
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 333 LCKNGKMDKASRLL 346
           L   G + +A   L
Sbjct: 738 LLHRGDITRAGAYL 751



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           ++LC  D+ L        +++FNI+ G L K+   +  + LF  ++S GL PD++T+ ++
Sbjct: 647 QSLCSKDFQLE-------ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLI 699

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
                + G +     +   + +S  TPN+    +L++ L     I  A A   K
Sbjct: 700 AENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCK 753


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 235/430 (54%), Gaps = 9/430 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G ++ I   +A  +F  M+   P P  V  F  L    A  + Y+TV+   +++   G+ 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYGIS 103

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
            D+Y+ +ILI+CFC+  R+S    VLG++++  + P+ VTF SL+ G C  +RI +A +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNT 258
                    EP+V  YNTLI+GLC+ G   +AL L  EM   G G        + VTYNT
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADVVTYNT 216

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++ GLC  G    A  +   M   +INPDVVT+T++I  F    + +EA+ L+ EM+   
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V P+ VT++ I++ LC +G++  A +  +LM  +G  PN  TYNTLI G+C    +D   
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           KLF  M   G   D+ +YNTLI+ YC+   +  AL ++  M+S+ + P ++T+  L  GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
               ++E AL  FD+MR +        YN  I GLCK+  V +A ELF  +     + + 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 499 VSYNCLIDGL 508
            +Y  +I GL
Sbjct: 457 RTYTIMILGL 466



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 245/445 (55%), Gaps = 11/445 (2%)

Query: 64  ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           AS     +ER ++    +++ I  ++A  +F  ML+  P P  V  F  +   +AK   +
Sbjct: 566 ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKF 620

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D V+ L+ ++ + G+  D+Y+ +ILI+CFC+  R+S    +LG++++  F P+ VT  SL
Sbjct: 621 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 680

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           + G C  +R  EA +L      F   P+V  YNT+INGLC+      AL +F  M     
Sbjct: 681 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG- 739

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                 + + VTYNT+I GL   G    A  L   M    I+P+V+ +T++I  F    +
Sbjct: 740 -----IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 794

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA+ L+ EM+ + V P+V T++ +++  C +G +  A  + +LM+ +G  P+  TYNT
Sbjct: 795 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 854

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G+C + +++   KLF  M   G + D  +YNTLI+ YC+   +  A  +++ M+  G
Sbjct: 855 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           + P +VTYN L   L    ++E+AL + ++++++ +  D  TYN  I GLC++  + EA 
Sbjct: 915 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 974

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            LFR++     + + ++Y  +I GL
Sbjct: 975 CLFRSLTRKGVKPDAIAYITMISGL 999



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 174/328 (53%), Gaps = 6/328 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V  +N +   L KN+  +  L +F  +   G+  D  T++ LI+     GR +    +
Sbjct: 707  PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L  +++    PN + FT+LI     E  ++EA  L+ +    +  P+VFTYN+LING C 
Sbjct: 767  LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G    A  +F+ M +        C P+ VTYNT+I G CK   V+   +LF +M  + +
Sbjct: 827  HGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              D  TY ++I G+C A   N A+++F  M+D GV PD+VT+++++D LC NGK++KA  
Sbjct: 881  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 940

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            ++E +    ++ +  TYN +I G C TDK+  A  LF S+   G   D ++Y T+I+  C
Sbjct: 941  MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +     EA  L   M   G  P+   Y+
Sbjct: 1001 RKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 6/192 (3%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++N L     K+K  +  + LF  +   GL  D +T++ LI+ +C+ G+++    V
Sbjct: 847  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              R++    +P+ VT+  L+  LC   +I +A  +    +    + D+ TYN +I GLCR
Sbjct: 907  FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            T     A  LF  +       GV  KP+ + Y T+I GLC++G   +A +L  +MK++  
Sbjct: 967  TDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020

Query: 285  NPDVVTYTSVIR 296
             P    Y   +R
Sbjct: 1021 MPSERIYDETLR 1032


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 153/430 (35%), Positives = 235/430 (54%), Gaps = 9/430 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G ++ I   +A  +F  M+   P P  V  F  L    A  + Y+TV+   +++   G+ 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYGIS 103

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
            D+Y+ +ILI+CFC+  R+S    VLG++++  + P+ VTF SL+ G C  +RI +A +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNT 258
                    EP+V  YNTLI+GLC+ G   +AL L  EM   G G        + VTYNT
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADVVTYNT 216

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++ GLC  G    A  +   M   +INPDVVT+T++I  F    + +EA+ L+ EM+   
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V P+ VT++ I++ LC +G++  A +  +LM  +G  PN  TYNTLI G+C    +D   
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           KLF  M   G   D+ +YNTLI+ YC+   +  AL ++  M+S+ + P ++T+  L  GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
               ++E AL  FD+MR +        YN  I GLCK+  V +A ELF  +     + + 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 499 VSYNCLIDGL 508
            +Y  +I GL
Sbjct: 457 RTYTIMILGL 466


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  261 bits (668), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 144/410 (35%), Positives = 226/410 (55%), Gaps = 14/410 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K +       LF+   + G  P + T++ +I+  CK GR+ +   +
Sbjct: 28  PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
              + +   F P  VT+++LI GLC +  + +   L  +     C P+  TYNTL+N L 
Sbjct: 88  YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA----KELFLKM 279
             G +  A +L E+MA  NG     C P  +T+  II GLCKEG ++ A     E+F  M
Sbjct: 148 GQGRSKEAFSLLEQMA-ANG-----CPPELITFGLIIKGLCKEGEIEAAFRVVDEMF--M 199

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            +  ++PDV+T+ SV+ G C      +A  +F   +++G +P+VVT+S ++D L K  KM
Sbjct: 200 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 259

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D+A +LL  M+  G   NT TY+T++DG     +++ A  +   M   GC+ D V+YNTL
Sbjct: 260 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 319

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ + K + + EA+ L  EML  G  P+VVTY TL  GL    + + A+++ D M     
Sbjct: 320 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 379

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDGL 508
           A +  TY++ +DGLCK+G V EAL  F  + RD     ++++Y+ LIDGL
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 213/407 (52%), Gaps = 9/407 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L          SL +++ + G  P++ T  ++I   CK G +   F V
Sbjct: 134 PNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRV 193

Query: 165 LGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           +  +  + S  +P+ +TF S++ GLC E RI++A  +F +     C P+V TY+TLI+GL
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 253

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            +      AL L  +M     E G  C+ NTVTY+T++DGL K G ++ A  +  +M+D 
Sbjct: 254 SKMAKMDEALQLLAKMV----ELG--CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              PD VTY ++I GF       EA  L  EM++ G  P VVT++ +   LC++G+ D+A
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLIN 401
             +L+ M  RG  PN  TY++++DG C   ++  A   F  M  +  +   V++Y+ LI+
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 427

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   ++EA      M+  G  P VVT++ L  GL +  +++  L+LF  M       
Sbjct: 428 GLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVP 487

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TY   +D LC++  V EA +LF+ +R      +  +   +I GL
Sbjct: 488 DMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 203/363 (55%), Gaps = 7/363 (1%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK  +V     +  +++     P+ VT+ +LI GL  + R+ EA  LF + R   
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TYNT+I+GLC+ G    AL L+++MA     FG   +P  VTY+T+IDGLC++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAI---HFGF--RPTVVTYSTLIDGLCRDH 115

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VDK  +L  +M      P+ VTY +++          EA  L  +M   G  P+++TF 
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFG 175

Query: 328 VIMDELCKNGKMDKASRLLE--LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +I+  LCK G+++ A R+++   MI  G++P+  T+N+++DG C   +I  A  +F    
Sbjct: 176 LIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 235

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GC  +VV+Y+TLI+   K   ++EAL L ++M+  G +   VTY+T+  GL ++ ++E
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ +  +MR      D  TYN  IDG  K   + EA+ L R + ++ +  ++V+Y  L 
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355

Query: 506 DGL 508
            GL
Sbjct: 356 HGL 358



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 7/350 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN +   L K +      ++FKR    G  P++ T+S LI+   KM ++     +
Sbjct: 206 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 265

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++      N VT+++++ GL    R+ +A  +  + R   C PD  TYNTLI+G  +
Sbjct: 266 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 325

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L  EM     E G    P+ VTY T+  GLC+ G  D+A E+   M     
Sbjct: 326 RQRLREAVGLLREML----EAGF--HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 379

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            P+ +TY+S++ G C A    EA   F +M  D+ V P V+ +S ++D LCK GK+D+A 
Sbjct: 380 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAY 439

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             LE MI  G  P+  T++ LI+G C   +ID   +LF  M   GC+ D+V+Y TL++  
Sbjct: 440 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           C+   V+EA  L+ +M S G+ P   T  T+  GL E+++ E A ++ DE
Sbjct: 500 CRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 12/197 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           +EA+ I DYM     +P  ++  +I+ G L K       L  F+++     + P +  +S
Sbjct: 365 DEAVEILDYMAARGCAPNAITYSSIVDG-LCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  CK G++   +  L R++R+   P+ VTF+ LI GLC   RI     LF      
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PD+ TY TL++ LCR      A +LF++M +          P+  T  T+I GL + 
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG------LSPDRSTRRTMIHGLLEV 537

Query: 267 GFVDKAKELFLKMKDEN 283
              + AK    +++DE 
Sbjct: 538 NRDEDAK----RIQDEE 550


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 154/454 (33%), Positives = 240/454 (52%), Gaps = 16/454 (3%)

Query: 56  LRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG 115
           +R    +R + +  LK  CK   QG +      +   +F+ ML    SP  +  +NIL  
Sbjct: 1   MRECSPNRYTFRVVLKSFCK---QGKLR-----DGYKLFEQMLDNGISPDGIE-YNILID 51

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
             AK    D    L++ + S GL P IYT++ L+N FCK  ++     +   +    F P
Sbjct: 52  GYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEP 111

Query: 176 NAVTFTSLIKGLCAESRIMEA-AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           + VT++++I GLC   ++ EA   LF K     C  +   YN LINGLC+  +   A  L
Sbjct: 112 DVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKL 171

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            EEMA+     G V  P+ +TYNTI+ GLC+ G V +AK+ F  M     +PDVV Y  +
Sbjct: 172 LEEMASK----GYV--PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL 225

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +         +EA +LF +++ +G  PD VT++ I+  L +   MD+A  + + M+  G 
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC 285

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  TY+ ++ G+C   K+D A K+   M   G + DVV+YN L++  CK   V++A  
Sbjct: 286 APNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+S M+  G  P +V+Y+ +  GL + ++V  A  LFD M    +  D  T+N  +DGLC
Sbjct: 346 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 405

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+G + EA +L   +  S    + V+YN L++GL
Sbjct: 406 KAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 32/391 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L     K       + LFK +   G  PD+ T+S +I+  CK G+V+    +
Sbjct: 76  PSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEM 135

Query: 165 L--GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           L    I R C + N V + +LI GLC +  I  A  L  +       PD  TYNT+++GL
Sbjct: 136 LFHKMIERGC-SANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGL 194

Query: 223 CRTGHTIVALNLFEEMANG---------NGEFGVVCK--------------------PNT 253
           CR G    A   F+ M +          NG    + K                    P+T
Sbjct: 195 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT 254

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           VTYN+I+ GL ++  +D+A+E+F KM      P+  TY+ V+ G C A   ++A ++  E
Sbjct: 255 VTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE 314

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M   G  PDVVT+++++D LCK   +DKA  L   M+  G  P+  +Y+ +++G C T+K
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  AR LF  M     + DVV++N L++  CK   ++EA  L  +M   G  P  V YNT
Sbjct: 375 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNT 434

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           L  GL +  +  +A +L   M+     +D +
Sbjct: 435 LMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 171/533 (32%), Positives = 256/533 (48%), Gaps = 99/533 (18%)

Query: 65  SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
            L++F+ +R +S        +  ++AL +FD +L  H  P  V++FN L   +++     
Sbjct: 116 QLERFIADRAQSGS------LASHDALKLFDLLLP-HARPASVTAFNHLLTAVSRASGRH 168

Query: 125 TVL------SLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           + L      SLF R+    S  + PD  T+SILI CFC+MGR+ HGF V G IL++ +  
Sbjct: 169 STLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRV 228

Query: 176 NAVTFTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           N + F  L+KGLC   R+ EA   L  +   F C P+V +YNTL+ G C       AL L
Sbjct: 229 NHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALEL 288

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
              MA+  G   + C P+ V+YNT+I+G  +EG VDKA  LFL+M D  I PDVVTY +V
Sbjct: 289 LHVMADDQG---LSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTV 345

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGV----------------------------------- 319
           I G C A   + AK +F +M+D+GV                                   
Sbjct: 346 IDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDL 405

Query: 320 QPDVVTFSVIMDELCKNGK---------------------MDKASRLLELMIWRGVNPNT 358
           +PD   +++++D LCKNG+                     +D+A  + + M  +G++PN 
Sbjct: 406 EPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNV 465

Query: 359 YTYNTLID-----------------------GYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             Y  LID                       G C  +K + A +L   M   G   DVV 
Sbjct: 466 VNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVV 525

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +NTL+   C+   V EA  L   ML  G++P V++YNTL  G     + + A KL D M 
Sbjct: 526 FNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMV 585

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +  + +TYN  + G CK+  + +A  L R +  +    ++V+YN ++ GL
Sbjct: 586 SIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGL 638



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/420 (34%), Positives = 220/420 (52%), Gaps = 27/420 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V S+N +     +    D   +LF ++   G+ PD+ T++ +I+  CK   V     
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V  ++L     P+  T+  LI G  +  +  E   L  +      EPD F Y  L++ LC
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420

Query: 224 RTGHTIVALNLFEEMANGNGEFGV-----VC----------KPNTVTYNTIIDGLCKEGF 268
           + G    A N+F+ +     +        VC           PN V Y  +ID LCK G 
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGR 480

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F +M +E            + G C    W +A+ L  EM+DQG++ DVV F+ 
Sbjct: 481 VDDAILKFNQMINE------------VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNT 528

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M +LC+ G++ +A RL+ELM+  GV P+  +YNTL+DG+CLT + D A KL   M S G
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +  +YNTL++ YCK + +++A SL  EML  G  P VVTYNT+  GLF+  +   A 
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAK 648

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L+  M  +    D YTYN  ++GLCK+  V EA ++F+++     +L+I+++N +I  L
Sbjct: 649 ELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGAL 708



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 188/417 (45%), Gaps = 33/417 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD ++R    P               +   D  + +F ++   GL P++  +  L
Sbjct: 427 EARNIFDSVIRKGIKP---------------DAMIDEAVCIFDKMRQQGLSPNVVNYGAL 471

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK+GRV    +   +++   +            GLC   +  +A  L  +      
Sbjct: 472 IDALCKLGRVDDAILKFNQMINEVY------------GLCTVEKWEKAEELVFEMLDQGI 519

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             DV  +NTL+  LCR G  + A  L E M        V  +P+ ++YNT++DG C  G 
Sbjct: 520 RLDVVVFNTLMCDLCREGRVMEAQRLIELM------LRVGVRPDVISYNTLVDGHCLTGR 573

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            D+A +L   M    + P+  TY +++ G+C A   ++A  L  EM+  G  PDVVT++ 
Sbjct: 574 TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT 633

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  L + G+  +A  L   MI      + YTYN +++G C  + +D A K+F S+ S G
Sbjct: 634 ILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKG 693

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               ++++N +I    K    E+A+ L++ + + G+ P V TY  +   L +   +E   
Sbjct: 694 LQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELG 753

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  M  N  A ++   N  +      G +  A      + +  + L   + + LI
Sbjct: 754 VLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 6/309 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  FN L   L +         L + +   G+ PD+ +++ L++  C  GR      +L 
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     PN  T+ +L+ G C   RI +A +L  +  +    PDV TYNT+++GL +TG
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L+  M N   ++      +  TYN I++GLCK   VD+A ++F  +  + +  
Sbjct: 643 RFSEAKELYLNMINSRTQW------DMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQL 696

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            ++T+  +I          +A  LF  +   G+ PDV T+ +I + L K G +++   L 
Sbjct: 697 HIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLF 756

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G  PN+   N L+  +     I  A      ++      +  + + LI+ Y + 
Sbjct: 757 SAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRG 816

Query: 407 KDVEEALSL 415
           +  + A SL
Sbjct: 817 EYQQLAKSL 825


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 234/437 (53%), Gaps = 23/437 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTV----------------LSLFK 131
           ++A  +F  ML     PP + ++N +   L K +  D                  + L K
Sbjct: 156 DKAYTLFHEMLG-QGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLK 214

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           +++  GL PD+ T+S+LI+ +CK+GR +    +   ++R    P+A T+ +L+ G   + 
Sbjct: 215 KMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKG 274

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
            +++   L           +   +N LI    +      A+  F EM            P
Sbjct: 275 ALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKG------FSP 328

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N VTY T+ID LCK G V+ A   F +M  E ++PD++T+TS+I G C   +W + ++L 
Sbjct: 329 NVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLS 388

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM+++G+ P+ +  + IMD LCK G++ +A    + +I  GV P+  +Y  LIDGYCL 
Sbjct: 389 FEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLD 448

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            K+D + KL   M S G   D V+Y+ L+N YCKN  V++AL+LY EM SK +KP  +TY
Sbjct: 449 GKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITY 508

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N +  GLF   +V  A + + ++  + +     TYN  + GLC++ FV EAL +F+ +R 
Sbjct: 509 NIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRS 568

Query: 492 SKYELNIVSYNCLIDGL 508
            +++L + ++N +I GL
Sbjct: 569 KEFQLEVRTFNIMIVGL 585



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M+R   +P   +   +L G   K    D +  L   +   G+  + +  +IL
Sbjct: 243 EARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVD-MHDLLALMIQDGIPLEDHVFNIL 301

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  + K   +         + +  F+PN VT+T++I  LC   R+ +A + F++      
Sbjct: 302 IRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGL 361

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+ T+ +LI+GLC  G       L  EM N          PN +  NTI+D LCKEG 
Sbjct: 362 SPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRG------IHPNAIFLNTIMDSLCKEGR 415

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A + F ++    + PDVV+YT +I G+C     +E+ +L   M+  G++PD VT+S 
Sbjct: 416 VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSA 475

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  CKNG++D A  L   M  + V PN  TYN ++ G     ++  AR+ ++ +  +G
Sbjct: 476 LLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSG 535

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               + +YN ++   C+N  V+EAL ++  + SK  +  V T+N + +GL ++ ++  A 
Sbjct: 536 IQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAK 595

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  +  + +  D   Y   I    + G + E+ ELF ++  +    N  + N ++  L
Sbjct: 596 SLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKL 655



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 214/469 (45%), Gaps = 64/469 (13%)

Query: 65  SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
            L++ + E+ +S   G        +AL +FD +L    S   V +FN +   +A      
Sbjct: 14  QLERIIVEQHRSGSLG------LEDALNLFDELLPRARSAS-VHAFNRVLTVVAHGDSSS 66

Query: 125 T-------VLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           +        +SLF  +   G   L  D  T  ILI CFC +G +                
Sbjct: 67  SQRHGAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFA------------- 113

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
                       L  ESR   AA        + C P+V +YN +INGL + G    A  L
Sbjct: 114 ------------LEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTL 161

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN----------- 283
           F EM       G    PN VTYN++IDGLCK   +DKA+ +  +M D+            
Sbjct: 162 FHEM------LGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKK 215

Query: 284 -----INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
                + PDVVTY+ +I  +C      EA+ +F  M+ +G  PD  T+  ++      G 
Sbjct: 216 MSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGA 275

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +     LL LMI  G+    + +N LI  Y   + +D A   F+ M   G   +VV+Y T
Sbjct: 276 LVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTT 335

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I+  CK   VE+A+S +S+M+S+G+ P ++T+ +L  GL  I + ++  KL  EM    
Sbjct: 336 VIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRG 395

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  +    N  +D LCK G VLEA + F  I     + ++VSY  LIDG
Sbjct: 396 IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 200/398 (50%), Gaps = 10/398 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNIL    AKN+  D  ++ F  +   G  P++ T++ +I+  CK GRV        +++
Sbjct: 298 FNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMV 357

Query: 170 RSCFTPNAVTFTSLIKGLC--AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
               +P+ +TFTSLI GLC   E + +E  +    +R     P+    NT+++ LC+ G 
Sbjct: 358 SEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR--GIHPNAIFLNTIMDSLCKEGR 415

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
            + A + F+++ +      V  KP+ V+Y  +IDG C +G +D++ +L  +M    + PD
Sbjct: 416 VLEAHDFFDQIIH------VGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPD 469

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VTY++++ G+C     ++A  L+ EM  + V+P+ +T+++I+  L   G++  A     
Sbjct: 470 NVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYM 529

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            ++  G+     TYN ++ G C    +D A ++F  + S     +V ++N +I    K  
Sbjct: 530 KIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVG 589

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +A SL+S +L  G+ P  + Y  +     E   +E + +LF  M +N   A++ T N
Sbjct: 590 RIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLN 649

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             +  L + G V  A      I + +Y +   +   LI
Sbjct: 650 AIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLI 687



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           ++++NI+ G L +N   D  L +F+ L S     ++ T +I+I    K+GR+     +  
Sbjct: 540 INTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFS 599

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            IL S   P+A+ +  +I+    E  + E+  LF       C  +  T N ++  L   G
Sbjct: 600 AILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKG 659


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 46/417 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML MH +PP V  F  + G LAK KHY T +SL K++   G+ P++ T +I
Sbjct: 34  DDAISQFNGMLLMHHTPPIVE-FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +G++S  F VLG+IL+  + PN +T T+L+KGLC +  + ++     K     
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +Y TL+NGLC+ G T  A+     + + +         N V YNTIIDGLCK+ 
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGL------NVVMYNTIIDGLCKDK 206

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A + + +M    I P+V+TYT++I GFC A     A  L  EM+ + + P+V T++
Sbjct: 207 LVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYA 266

Query: 328 VIMDELCKNGKMDKASRLLELMIWR----------------------------------- 352
           +++D LCK GK+ +A  LL  M +R                                   
Sbjct: 267 ILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEW 326

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN YTY  LIDG C   ++  A+KLF  +   GC  DV +YN +I   CK   ++EA
Sbjct: 327 GIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEA 386

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           L++ S+M   G  P VVT+  +   LF+  + ++A KL  EM    +A     + NF
Sbjct: 387 LAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM----IAKGLLRFRNF 439


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 250/462 (54%), Gaps = 32/462 (6%)

Query: 55  SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
           SLR++  D  +    +   CK  GQ D       EA  +FD M+      P V ++N L 
Sbjct: 353 SLRVS-PDTVTFSTLIDGLCKC-GQID-------EACSVFDDMI-AGGYVPNVITYNALV 402

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL-GRILRSCF 173
             L K    +   ++ + +   G+ PD+ T+S+L++ FCK  RV     +L G   R C 
Sbjct: 403 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC- 461

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFT----KHRVFACEPDVFTYNTLINGLCRTGHTI 229
           TPN VTF S+I GLC   R  EA  +F     KH +    PD  TY TLI+GL RTG   
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLV---PDKITYCTLIDGLFRTGRAG 518

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L + M +          P+T  +N  I+GL K G V +A +++ +M +  + PD V
Sbjct: 519 QAEALLDAMPD----------PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKV 568

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T+  +I G C A ++ +A  LF EM+ + +QPDV+TF  ++D LCK G+++ A  +L+LM
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              GV PN  TYN L+ G C + +I+ A +    M S+GC+ D ++Y +L+   C+    
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 688

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++AL L SE+ S G  P  VTYN L  GL++  Q E+A+ + +EM       D  TYN  
Sbjct: 689 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748

Query: 470 IDGLCKSGFVLEALELFRAI--RDSKYEL-NIVSYNCLIDGL 508
           ID LCK+G + EA  L   +  R S+  + N+V+Y+ LI+GL
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 161/493 (32%), Positives = 245/493 (49%), Gaps = 77/493 (15%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            + AL +++ ML +   P  V+ FNIL     K  +++   +LF+ + +  L PD+ T   
Sbjct: 549  SRALQVYNRMLELELVPDKVT-FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 148  LINCFCKMGRVS-------------------------HGFVVLGRILRSC---------- 172
            LI+  CK G+V                          HG    GRI  +C          
Sbjct: 608  LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 173  FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
              P+++T+ SL+  LC  SR  +A  L ++ + F  +PD  TYN L++GL ++G T  A+
Sbjct: 668  CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 233  NLFEEMANGNGEFGVV--------------------------------CKPNTVTYNTII 260
             + EEM        VV                                C PN VTY+ +I
Sbjct: 728  TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 261  DGLCKEGFVDKAKELFLKM--KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            +GLCK G +D+A+EL  +M  K  ++ P+++TY S + G C  +   EA  L   + D  
Sbjct: 788  NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 319  --VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
              V PD VTFS ++D LCK G+ D+A  + + MI  G  PN  TYN L++G C TDK++ 
Sbjct: 848  LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            A  +  SM   G   DV++Y+ L++ +CK   V+EAL L   M S+G  P VVT+N++  
Sbjct: 908  AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967

Query: 437  GLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +  Q   A ++FD+M   H +A D  TY   IDGL ++G+  +A  L  A+ D    
Sbjct: 968  GLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP--- 1024

Query: 496  LNIVSYNCLIDGL 508
             +  ++NC I+GL
Sbjct: 1025 -DTYAFNCCINGL 1036



 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 230/453 (50%), Gaps = 38/453 (8%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL IF   +      P + ++N +   L K+      + LF+ L   G  PD+ T++ LI
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLI 258

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK G +     + G +      PN VT++ LI GLC   RI EA  L  +    +C+
Sbjct: 259 DSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 318

Query: 210 --PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ TYN+ ++GLC+   T  A  L   + +G+    +   P+TVT++T+IDGLCK G
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS----LRVSPDTVTFSTLIDGLCKCG 374

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  +F  M      P+V+TY +++ G C A+    A  +   M+D+GV PDV+T+S
Sbjct: 375 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 434

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-S 386
           V++D  CK  ++D+A  LL  M  RG  PN  T+N++IDG C +D+   A ++F  M   
Sbjct: 435 VLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALK 494

Query: 387 NGCMHDVVSYNTL-------------------------------INWYCKNKDVEEALSL 415
           +G + D ++Y TL                               IN   K  DV  AL +
Sbjct: 495 HGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQV 554

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           Y+ ML   + P  VT+N L  G  +    E+A  LF+EM   ++  D  T+   IDGLCK
Sbjct: 555 YNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 614

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G V  A ++   + +     N+V+YN L+ GL
Sbjct: 615 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 647



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/438 (31%), Positives = 221/438 (50%), Gaps = 38/438 (8%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   ++  L   L +    D  L L   L S G  PD  T++IL++   K G+      V
Sbjct: 670  PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITV 729

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKHRVFACEPDVFTYNTLING 221
            L  ++     P+ VT+ +LI  LC    + EA  L    +      C P+V TY+ LING
Sbjct: 730  LEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLING 789

Query: 222  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            LC+ G    A  L +EM   + +      PN +TYN+ +DGLCK+  + +A EL   ++D
Sbjct: 790  LCKVGRIDEARELIQEMMRKSCDV----LPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845

Query: 282  EN--INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             +  ++PD VT++++I G C     +EA  +F +M+  G  P+VVT++V+M+ LCK  KM
Sbjct: 846  GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905

Query: 340  DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            ++A  ++E M+ +GV P+  TY+ L+D +C    +D A +L   M S GC  +VV++N++
Sbjct: 906  ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSI 965

Query: 400  INWYCKNKDVEEALSLYSEM-LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM---- 454
            I+  CK+    EA  ++ +M L  G+ P  +TY TL  GLF      +A  L D M    
Sbjct: 966  IDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPD 1025

Query: 455  ------------------RRNH------VAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
                              R  H      +  D  T+N  I G CK+G   +A  LF  + 
Sbjct: 1026 TYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 1085

Query: 491  DSKYELNIVSYNCLIDGL 508
                + +++++  LIDGL
Sbjct: 1086 AKNLQPDVMTFGALIDGL 1103



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 239/505 (47%), Gaps = 52/505 (10%)

Query: 46  PTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALC--IFDYMLRMHPS 103
           P + S+  ESLR      A+L+        S     +  +  N  L    +D+   +   
Sbjct: 48  PRSISEALESLRPGQSVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGF 107

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS----------------- 146
              + SFN     L K+      + LF+        P+ +T+S                 
Sbjct: 108 KHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTL 167

Query: 147 -----------------ILINCFCKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLC 188
                            I++   C+ G  +    +  G + R    P  VT+ ++I GLC
Sbjct: 168 GFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLC 227

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
             + +     LF +       PDV TYNTLI+ LC+ G    A  L  +M++ +      
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS------ 281

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKM--KDENINPDVVTYTSVIRGFCYANDWNE 306
           C PN VTY+ +I+GLCK G +D+A+EL  +M  K  ++ P+++TY S + G C  +   E
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341

Query: 307 AKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           A  L   + D    V PD VTFS ++D LCK G++D+A  + + MI  G  PN  TYN L
Sbjct: 342 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 401

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           ++G C  DK++ A  +  SM   G   DV++Y+ L++ +CK   V+EAL L   M S+G 
Sbjct: 402 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 461

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEAL 483
            P VVT+N++  GL +  +   A ++FD+M   H +  D  TY   IDGL ++G   +A 
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            L  A+ D     +  ++NC I+GL
Sbjct: 522 ALLDAMPDP----DTYAFNCCINGL 542



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 205/413 (49%), Gaps = 46/413 (11%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   ++NIL   L K+   +  +++ + +   G  PD+ T++ LI+  CK G +     +
Sbjct: 705  PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 165  LG----RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE--PDVFTYNTL 218
             G    R+ R C  PN VT++ LI GLC   RI EA  L  +    +C+  P++ TYN+ 
Sbjct: 765  HGDMSSRVSRCC-VPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823

Query: 219  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
            ++GLC+      A  L   + +G+    +   P+TVT++T+IDGLCK G  D+A  +F  
Sbjct: 824  LDGLCKQSMMAEACELMRSLRDGS----LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 279  MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            M      P+VVTY  ++ G C  +    A  +   M+D+GV PDV+T+SV++D  CK   
Sbjct: 880  MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 339  MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-SNGCMHDVVSYN 397
            +D+A  LL  M  RG  PN  T+N++IDG C +D+   A ++F  M   +G   D ++Y 
Sbjct: 940  VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999

Query: 398  TLI-------------------------------NWYCKNKDVEEALSLYSEMLSKGIKP 426
            TLI                               N   K  DV  AL     ML   + P
Sbjct: 1000 TLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALH---RMLELELVP 1056

Query: 427  TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              VT+N L  G  +    E+A  LF+EM   ++  D  T+   IDGLCK+G V
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 137/271 (50%), Gaps = 12/271 (4%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   +F+ L   L K    D   ++F  + + G  P++ T+++L+N  CK  ++     +
Sbjct: 852  PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAM 911

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            +  ++    TP+ +T++ L+   C  S + EA  L        C P+V T+N++I+GLC+
Sbjct: 912  IESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 971

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            +  +  A  +F++M   +G       P+ +TY T+IDGL + G+  +A+ L   M D   
Sbjct: 972  SDQSGEAFQMFDDMTLKHG-----LAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD--- 1023

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             PD   +   I G     D     R    M++  + PD VTF++++   CK G  ++AS 
Sbjct: 1024 -PDTYAFNCCINGLSKLGD---VSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASA 1079

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            L E M+ + + P+  T+  LIDG C   +++
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 150/291 (51%), Gaps = 32/291 (10%)

Query: 55   SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
            SLR++  D  +    +   CK  GQ D       EA  +FD M+      P V ++N+L 
Sbjct: 847  SLRVS-PDTVTFSTLIDGLCKC-GQTD-------EACNVFDDMI-AGGYVPNVVTYNVLM 896

Query: 115  GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL-GRILRSCF 173
              L K    +   ++ + +   G+ PD+ T+S+L++ FCK   V     +L G   R C 
Sbjct: 897  NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGC- 955

Query: 174  TPNAVTFTSLIKGLCAESRIMEAAALFT----KHRVFACEPDVFTYNTLINGLCRTGHTI 229
            TPN VTF S+I GLC   +  EA  +F     KH +    PD  TY TLI+GL RTG   
Sbjct: 956  TPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGL---APDKITYCTLIDGLFRTGWAG 1012

Query: 230  VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             A  L + M +          P+T  +N  I+GL K G V +A    L+++   + PD V
Sbjct: 1013 QAEVLLDAMPD----------PDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKV 1059

Query: 290  TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            T+  +I G C A ++ +A  LF EM+ + +QPDV+TF  ++D LCK G+++
Sbjct: 1060 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 131/300 (43%), Positives = 194/300 (64%), Gaps = 6/300 (2%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY T+INGLC+ G T+ A  LF++M    GE G  C+P+ VTY+TIID LCK+  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKM----GEAG--CQPDVVTYSTIIDSLCKDRR 60

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V++A ++F  MK + I+P++ TY S+I+G C  + W EA  +  EMM   + P++VTFS+
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  CK G + +A  +L+ M   GV PN  TY++L++GY L  ++  ARKLF  M + G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  DV SYN LIN YCK K + EA  L++EM+ +G+ P +V+YNTL  GL ++ ++  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  M  N    D  TY+  +DG CK G++ +A  LFRA++ +  + N+V YN LID +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  +   L K         LFK++  AG  PD+ T+S +I+  CK  RV+    +
Sbjct: 8   PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +PN  T+ SLI+GLC  SR  EA+A+  +       P++ T++ LIN  C+
Sbjct: 68  FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  + + M     E GV  +PN VTY+++++G   +  V +A++LF  M  +  
Sbjct: 128 EGNVFEARGVLKTMT----EMGV--EPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGC 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV +Y  +I G+C A    EAK+LF EM+ QG+ PD+V+++ ++D LC+ G++ +A  
Sbjct: 182 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 241

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+  G  P+  TY+ L+DG+C    +  A +LF +M+S     ++V YN LI+  C
Sbjct: 242 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           K+++++EA  L+SE+  +G++P +  +      LFEI +   AL++
Sbjct: 302 KSRNLKEARKLFSELFVQGLQPNMKHWK-----LFEIWKRMAALRM 342



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 185/320 (57%), Gaps = 6/320 (1%)

Query: 135 SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
           + G  PD++T++ +IN  CK+G       +  ++  +   P+ VT++++I  LC + R+ 
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVN 62

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA  +F+  +     P++FTYN+LI GLC       A  +  EM + N        PN V
Sbjct: 63  EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN------IMPNIV 116

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T++ +I+  CKEG V +A+ +   M +  + P+VVTY+S++ G+    +  EA++LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           + +G +PDV +++++++  CK  ++ +A +L   MI +G+ P+  +YNTLIDG C   ++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  LF +M +NG + D+ +Y+ L++ +CK   + +A  L+  M S  +KP +V YN L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 435 FLGLFEIHQVERALKLFDEM 454
              + +   ++ A KLF E+
Sbjct: 297 IDAMCKSRNLKEARKLFSEL 316



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 35/230 (15%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+ +G QPDV T++ I++ LCK G+   A+ L + M   G  P+  TY+T+ID  C   +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 374 IDHARKLFVSMESNG-----------------------------------CMHDVVSYNT 398
           ++ A  +F  M++ G                                    M ++V+++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LIN +CK  +V EA  +   M   G++P VVTY++L  G     +V  A KLFD M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              D ++YN  I+G CK+  + EA +LF  +       +IVSYN LIDGL
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 230


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 221/405 (54%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++ N L   LA++++Y    S+++R+    + P   + S LI CF    +   GF V
Sbjct: 72  PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +G +L+  FT N      ++KGLC    + EA  L  +    +  PD+ +YNTLINGLC+
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L  EM          C PN+VT  T++DGLCK+G +D+A EL   MK +  
Sbjct: 192 AKKLKEAVGLLLEMEAAG------CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF 245

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + DVV Y ++I GFC   + +  K LF EM+ +G+  +VVT+S ++  LC+ G+  +A+ 
Sbjct: 246 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 305

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M   G++P+  TY  LIDG C   +  HA  L   M   G     V+YN L++  C
Sbjct: 306 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 365

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAAD 462
           K   V +A  +   M+ KG K  VVTYNTL  GL +  +V+ ALKLF+ M    N +  +
Sbjct: 366 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +T+N  I GLCK G + +A+++ R +       N+V+YN L+ G
Sbjct: 426 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 470



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 44/442 (9%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+   ++ G L K+   D  + L + +   G   D+  +  LI+ FC  G +  G  
Sbjct: 212 PNSVTCTTLMDG-LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKE 270

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L    + N VT++ L+ GLC   +  EA  +          PDV TY  LI+GLC
Sbjct: 271 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 330

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A++L   M    GE     +P+ VTYN ++ GLCKEG V  A ++   M ++ 
Sbjct: 331 KDGRATHAMDLLNLMVE-KGE-----EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDK 341
              DVVTY ++++G C     +EA +LF  M D    ++P+V TF++++  LCK G++ K
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444

Query: 342 ASRLLELMI------------------------------WR-----GVNPNTYTYNTLID 366
           A ++   M+                              W+     G  PN++TY+ LID
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    ++ A+ LF  M ++G    +  YNTL+   CK   +E+A SL+ EM +   +P
Sbjct: 505 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            ++++NT+  G  +    +   +L  +M    +  D  T++  I+ L K G + EA    
Sbjct: 565 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +  S +  + + Y+ L+ GL
Sbjct: 625 ERMVASGFTPDALVYDSLLKGL 646



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 207/412 (50%), Gaps = 11/412 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGC--LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           +FD ML    S   V+   ++ G   L + K  +TVL+    +   G+ PD+ T++ LI+
Sbjct: 271 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN---AMAEHGIHPDVVTYTGLID 327

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GR +H   +L  ++     P+ VT+  L+ GLC E  +++A  +         + 
Sbjct: 328 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 387

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           DV TYNTL+ GLC  G    AL LF  M +         +PN  T+N +I GLCKEG + 
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN----CLEPNVFTFNMLIGGLCKEGRLT 443

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           KA ++  KM  +    ++VTY  ++ G   A    EA  L+ +++D G  P+  T+S+++
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D  CK   ++ A  L   M   G+NP  + YNTL+   C    ++ A+ LF  M +  C 
Sbjct: 504 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 563

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D++S+NT+I+   K  D +    L  +M+  G++P  +T++TL   L ++ +++ A   
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR--AIRDSKYELNIVS 500
            + M  +    D   Y++ + GL   G   E + L    A + +  +  IVS
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVS 675



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 179/356 (50%), Gaps = 31/356 (8%)

Query: 184 IKGLCAE--SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN- 240
           ++ LC +  S+  EA +LF     F   P   T N L++ L R+ +  +A +++  M + 
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 241 ------------------------GNGEFGVVCKP----NTVTYNTIIDGLCKEGFVDKA 272
                                   G G  G+V K     N    N ++ GLC+ G V +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L  +M  ++++PD+V+Y ++I G C A    EA  L +EM   G  P+ VT + +MD 
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK+G+MD+A  LLE M  +G + +   Y TLI G+C    +D  ++LF  M   G   +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+Y+ L++  C+    +EA ++ + M   GI P VVTY  L  GL +  +   A+ L +
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M          TYN  + GLCK G V++A ++ R + +   + ++V+YN L+ GL
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 190/407 (46%), Gaps = 8/407 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V ++  L   L K+      + L   +   G  P   T+++L++  CK G V  
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTL 218
            F +L  ++      + VT+ +L+KGLC + ++ EA  LF          EP+VFT+N L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I GLC+ G    A+ +  +M    G  G     N VTYN ++ G  K G + +A EL+ +
Sbjct: 433 IGGLCKEGRLTKAVKIHRKMVK-KGSCG-----NLVTYNMLLGGCLKAGKIKEAMELWKQ 486

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           + D    P+  TY+ +I GFC     N AK LF EM   G+ P +  ++ +M  LCK G 
Sbjct: 487 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 546

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +++A  L + M      P+  ++NT+IDG          ++L + M   G   D ++++T
Sbjct: 547 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 606

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LIN   K  +++EA S    M++ G  P  + Y++L  GL         + L  +M    
Sbjct: 607 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
              D    +  +  LC S   ++ +EL         E   +S N L+
Sbjct: 667 TVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 713



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 17/349 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRL--NSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           V ++N L   L      D  L LF  +  N   L P+++T ++LI   CK GR++    +
Sbjct: 389 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 448

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++     N VT+  L+ G     +I EA  L+ +       P+ FTY+ LI+G C+
Sbjct: 449 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 508

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                +A  LF EM            P    YNT++  LCKEG +++AK LF +M + N 
Sbjct: 509 MRMLNIAKGLFCEMRTHG------LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD++++ ++I G   A D+   K L ++M++ G++PD +TFS +++ L K G++D+A  
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            LE M+  G  P+   Y++L+ G            L   M + G + D    +T++   C
Sbjct: 623 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682

Query: 405 ---KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
              +  DV E L  + +  S+G     ++ N L   L ++HQ    L+L
Sbjct: 683 HSIQEVDVMELLPTFFQGTSEGAS---ISCNEL---LMQLHQSHPKLQL 725


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 148/445 (33%), Positives = 233/445 (52%), Gaps = 31/445 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F+ +LR +P+PP    FN + G L K+KHY TVLSL +++   G+ P+++  +I
Sbjct: 68  DDAVSLFNRLLRQNPTPPAFE-FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 148 LINCFCKMG----RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           LI CFC++G    ++   F+   +++   F  + V++ +LI GLC       A  L  + 
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                + +   YNT+I G+C+  H   A +L+ EM +          PN VTY+ +I G 
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG------ISPNVVTYSALISGF 240

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
              G +  A +LF K+  ENI PD  T+  ++ GFC      E K +F  MM QG+ PDV
Sbjct: 241 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDV 300

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT++ +MD  C   +++ A  +   M   GVNP+  +YN LI+G+C   K+D A  LF  
Sbjct: 301 VTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 360

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M     + +VV+YN+LI+   K+  +  AL L  +M  +G+ P ++TYN++   LF+ HQ
Sbjct: 361 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 420

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGL--------------------CKSGFVLEAL 483
           V++A+ L  + +   +    YTY   IDGL                    CK G   EAL
Sbjct: 421 VDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEAL 480

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            L   ++DS    N V+Y   I  L
Sbjct: 481 SLLSKMKDSSCIPNAVTYEITIRSL 505



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 21/345 (6%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N +   + K+KH +    L+  + S G+ P++ T+S LI+ F  +G++     +  +I+
Sbjct: 198 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 257

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+  TF  L+ G C + ++ E   +F         PDV TYN+L++G C      
Sbjct: 258 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVN 317

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A ++F  MA G    GV   P+  +YN +I+G CK   VDKA  LF +M  +NI P+VV
Sbjct: 318 TAKSIFNTMAQG----GV--NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY S+I G   +   + A +L  +M D+GV P+++T++ I+D L K  ++DKA  L+   
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 431

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ P+ YTY  LIDG C  +  D                 V +YN +I+ +CK    
Sbjct: 432 KDQGIQPSMYTYTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCKKGLF 476

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +EALSL S+M      P  VTY      L + ++ ++A KLF EM
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 152/353 (43%), Gaps = 56/353 (15%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  ++  M+    SP  V+   ++ G     K  D +  LF ++    + PD YT +I
Sbjct: 212 NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI-DLFNKIILENIKPDGYTFNI 270

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK  ++  G  V   +++    P+ VT+ SL+ G C    +  A ++F       
Sbjct: 271 LVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGG 330

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM---------------ANGNGEFGVV---- 248
             PD+ +YN LING C+      A+NLF EM                +G  + G +    
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT------ 292
                       PN +TYN+IID L K   VDKA  L  K KD+ I P + TYT      
Sbjct: 391 QLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 450

Query: 293 --------------SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
                          +I GFC    ++EA  L  +M D    P+ VT+ + +  L  N +
Sbjct: 451 CKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            DKA +L   MI RG+   + +Y       C + KI  +  +      + C H
Sbjct: 511 NDKAEKLFREMITRGLLNRSASYP------CSSMKIHQSLTMVQHTWCDSCSH 557



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 39/258 (15%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           ++Y+S    F   ND ++A  LF  ++ Q   P    F+ I+  L K+        L + 
Sbjct: 52  ISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK 111

Query: 349 MIWRGVNPNTY---------------------------------------TYNTLIDGYC 369
           M +RG+ PN +                                       +Y TLI G C
Sbjct: 112 MEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 171

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +   A  L   ++      + V YNT+I   CK+K V +A  LYSEM+SKGI P VV
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+ L  G F + +++ A+ LF+++   ++  D YT+N  +DG CK   + E   +F  +
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291

Query: 490 RDSKYELNIVSYNCLIDG 507
                  ++V+YN L+DG
Sbjct: 292 MKQGIIPDVVTYNSLMDG 309



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 6/157 (3%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N  +Y++    +   + +D A  LF  +           +N ++    K+K     LSL 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 417 SEMLSKGIKPTVVTYNTLF-----LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            +M  +GIKP +   N L      LGL    Q+ +A    D++       D  +Y   I 
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPC-QIHQAFLFHDKLVALGFHLDQVSYGTLIH 168

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G    AL+L + +     +LN V YN +I G+
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGM 205


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 236/423 (55%), Gaps = 10/423 (2%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            + AL  FD+            + N L   L + K     L +++  N     P+++T +I
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTI 882

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVF 206
            LI+  C+ G +   + +L  + R     N +    +IKGLC+  ++  A  LF +     
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            +C PDVFTY+T+++ L ++G    A  L E+M +        C PN VTY++++ GLCK 
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG------CSPNVVTYSSLLHGLCKA 996

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            G +D+A  L  +M     +P++VTY ++I G C     +EA  L  EM+D G QP+VVT+
Sbjct: 997  GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +V++D  CK GK + A  L+E+M+ +G  PN +TYN+L+D +C  D+++ A +L  SM  
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             GC+ +VVSYNT+I   CK   V E + L  +MLS    P +VT+NT+   + + ++V+ 
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLI 505
            A +LF+ ++ +    +  TYN+ + GLCKS    +A  L R + R      +I++YN +I
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236

Query: 506  DGL 508
            DGL
Sbjct: 1237 DGL 1239



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 217/405 (53%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   ++N +   L+K+   D  + L + +   G  P++++++ +++ FCK  RV +   
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 286

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L +++     P+ V++T++I GLC   ++ EA  +  K     C+P+V TY TL++G C
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 346

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G    A+ L  +M     E G   +PN +TYN I+   C+   +++A ++   M    
Sbjct: 347 RVGDLDGAVELVRKMT----ERGY--RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD + Y+++I GFC A    EA  L  +M+ +G +PDV   S ++D LCK   +D A 
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL + I     P+   Y+ LI   C   ++  A      M  N C  DVV+YN++++  
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK++ + +A  L+  M + G+ P VVTY+ +     + + ++ A K+ + M+      D 
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY+  I+GLCK+G V +A ++F+ +       N+V+YN LIDGL
Sbjct: 581 VTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 224/422 (53%), Gaps = 7/422 (1%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            + AL +F  M      PP V +++ +   L K+   D    L + + S G  P++ T+S 
Sbjct: 929  DSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSS 988

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            L++  CK G++     +L R+ RS  +PN VT+ ++I G C   RI EA  L  +     
Sbjct: 989  LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C+P+V TY  L++  C+ G    A+ L E M     E G V  PN  TYN+++D  CK+ 
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV----EKGYV--PNLFTYNSLLDMFCKKD 1102

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             V++A +L   M  +   P+VV+Y +VI G C A   +E   L  +M+     PD+VTF+
Sbjct: 1103 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ES 386
             I+D +CK  ++D A  L  L+   G  PN  TYN+L+ G C + + D A  L   M   
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             GC  D+++YNT+I+  CK+K V+ A  L+ +MLS G+ P  VTY+ +   L +   ++ 
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 1282

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            A  + + M +N       TY   IDG CK+G + +ALE+ + +       ++V+++  ID
Sbjct: 1283 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 1342

Query: 507  GL 508
             L
Sbjct: 1343 WL 1344



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 214/395 (54%), Gaps = 8/395 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++ +L     K    +  + L + +   G  P+++T++ L++ FCK   V     +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L  +++    PN V++ ++I GLC  +++ E   L  +     C PD+ T+NT+I+ +C+
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDEN 283
            T    +A  LF  +          C PN VTYN+++ GLCK    D+A+ L  +M + + 
Sbjct: 1171 TYRVDIAYELFNLIQESG------CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 1224

Query: 284  INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             +PD++TY +VI G C +   + A +LF++M+  G+ PD VT+S+++  LCK   MD+A+
Sbjct: 1225 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 344  RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             +LELM+  G +P   TY TLIDG+C T  +D A ++   + S G   DVV+++  I+W 
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344

Query: 404  CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
             K   + +A  L   ML  G+ P  VTYNTL  G  +    E A+ LF+ MR+     D 
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 464  YTYNNFIDGLCKSGFVLEAL-ELFRAIRDSKYELN 497
             TY   +  L       + L E+ +++ D+ ++LN
Sbjct: 1405 ATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 1439



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 217/419 (51%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + + M+     PP V S+  +   L K    D    +  ++   G  P++ T+  L+
Sbjct: 284 ALWLLEQMV-TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + FC++G +     ++ ++    + PNA+T+ +++   C  + +  A  +        C 
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD   Y+T+I+G C+ G    A +L E+M          C+P+    +T+ID LCK   +
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRG------CRPDVACLSTLIDALCKAAAI 456

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A+EL       +  PDVV Y+ +I   C A    EA+     M+     PDVVT++ +
Sbjct: 457 DSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSV 516

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LCK+ +++ A  L + M   GV P+  TY+ +I  +C  + +D A K+   M+   C
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + DVV+Y+ LIN  CK   V++A  ++ EML  G  P +VTYNTL  GL +I++VE+A +
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE 636

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + + MR+     D+ TY   I+GLC +  + EA  + R ++D     + ++Y  L+  L
Sbjct: 637 MLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 222/422 (52%), Gaps = 8/422 (1%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA  +   M R   SP  V+ +N +     K    D    L + +   G  P++ T+++
Sbjct: 1000 DEATALLQRMTRSGCSPNIVT-YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            L++ FCK G+      ++  ++   + PN  T+ SL+   C +  +  A  L +      
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C P+V +YNT+I GLC+       + L E+M + N      C P+ VT+NTIID +CK  
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN------CVPDIVTFNTIIDAMCKTY 1172

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQPDVVTF 326
             VD A ELF  +++    P++VTY S++ G C +  +++A+ L  EM   QG  PD++T+
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            + ++D LCK+ ++D+A +L   M+  G+ P+  TY+ +I   C    +D A  +   M  
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            NG     ++Y TLI+ +CK  ++++AL +   +LSKG  P VVT++     L +  ++ +
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 1352

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            A +L + M R  +  DT TYN  + G C +    +A++LF  +R    E +  +Y  L+ 
Sbjct: 1353 AGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVG 1412

Query: 507  GL 508
             L
Sbjct: 1413 HL 1414



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 210/425 (49%), Gaps = 7/425 (1%)

Query: 84  LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           LI P  AL  F++          +   N L   L K   Y     LF+         D  
Sbjct: 103 LIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTV 162

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+S LI+ F + G++   + +   + R     +A    S+++GLC   +  +A   F + 
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF-RE 221

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C PD  TYNT+INGL ++     A+ L EEM + NG F     PN  +YNT++ G 
Sbjct: 222 MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD-NG-FA----PNVFSYNTVLHGF 275

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK   V+ A  L  +M      PDVV+YT+VI G C  +  +EA R+  +M+ +G QP+V
Sbjct: 276 CKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNV 335

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           +T+  ++D  C+ G +D A  L+  M  RG  PN  TYN ++  +C  + ++ A ++   
Sbjct: 336 ITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQM 395

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   GC  D ++Y+T+I+ +CK   + EA  L  +M+ +G +P V   +TL   L +   
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA 455

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           ++ A +L         A D   Y+  I  LCK+  + EA      +  ++   ++V+YN 
Sbjct: 456 IDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNS 515

Query: 504 LIDGL 508
           ++DGL
Sbjct: 516 VVDGL 520



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 176/350 (50%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N +     +    +    + + +   G  PD   +S +I+ FCK G++     +
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++R    P+    ++LI  LC  + I  A  L        C PDV  Y+ LI+ LC+
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +  + M          C P+ VTYN+++DGLCK   ++ A  LF +M+   +
Sbjct: 488 AKRLPEAESWLDVMVKNR------CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+ VI  FC  N+ + A ++   M +    PDVVT+S +++ LCK G +DKA  
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+  G  PN  TYNTLIDG C  +K++ A ++   M    C  D ++Y  LIN  C
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
               +EEA  +  EM  KG  P  +TY TL   L + + +E   +L  EM
Sbjct: 662 NASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 198/413 (47%), Gaps = 10/413 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M++     P V ++  L     +    D  + L +++   G  P+  T++ 
Sbjct: 317 DEACRVMDKMIQ-RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 375

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++ FC+   +     VL  ++++   P+A+ ++++I G C   ++ EA  L  +     
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV   +TLI+ LC+      A  L           G+ C P+ V Y+ +I  LCK  
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRM------SIGMDCAPDVVAYSILIHALCKAK 489

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A+     M      PDVVTY SV+ G C +   N+A  LF  M   GV PDVVT+S
Sbjct: 490 RLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYS 549

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++   CK+  +D A ++LE M      P+  TY+ LI+G C    +D A  +F  M   
Sbjct: 550 IVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGC 609

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  ++V+YNTLI+  CK   VE+A  +   M  +   P  +TY  L  GL    ++E A
Sbjct: 610 GCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSG---FVLEALELFRAIRDSKYELN 497
            ++  EM+      D  TY   +  L K+     V + L+   A  + ++  N
Sbjct: 670 WRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNAN 722



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 204/484 (42%), Gaps = 90/484 (18%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V S+N +   L K       + L +++ S    PDI T + +I+  CK  RV   + +
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLC 223
               I  S  TPN VT+ SL+ GLC   R  +A  L  +  R   C PD+ TYNT+I+GLC
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 1240

Query: 224  RTGHTIVALNLFEEM-----ANGNGEFGVV----CK--------------------PNTV 254
            ++     A  LF +M     A  +  + +V    CK                    P  +
Sbjct: 1241 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 1300

Query: 255  TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            TY T+IDG CK G +DKA E+   +  +   PDVVT++  I          +A  L   M
Sbjct: 1301 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360

Query: 315  MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI----DGYCL 370
            +  G+ PD VT++ ++   C     + A  L E+M   G  P+  TY TL+    D    
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 1420

Query: 371  TD--------------KIDH----------------------------------ARKLFV 382
             D              K++H                                  ARK+F 
Sbjct: 1421 KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFE 1480

Query: 383  SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             M+      +VV ++ ++  Y  +K  E+A  L+  M  +G++P  VT+ +L        
Sbjct: 1481 GMDQ----RNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAG 1536

Query: 443  QVERALKLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             ++ A+  F  + R++ +      ++  ID L + G V EA +L   +     + +  ++
Sbjct: 1537 LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGM---PCKPSAATW 1593

Query: 502  NCLI 505
            NCL+
Sbjct: 1594 NCLL 1597



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 173/415 (41%), Gaps = 64/415 (15%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++A  +   M R     P + ++N +   L K+K  D    LF ++ S GL PD  T+SI
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +I+  CK   +     VL  +L++ F P A+T+ +LI G C    + +A  +        
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              PDV T++  I+ L + G    A  L E M       G+V  P+TVTYNT++ G C   
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA----GLV--PDTVTYNTLLKGFCDAS 1383

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE----MMDQG----- 318
              + A +LF  M+     PD  TYT+++    +  D    K L  E    M+D G     
Sbjct: 1384 LTEDAVDLFEVMRQCGCEPDNATYTTLVG---HLVDKKSYKDLLAEVSKSMVDTGFKLNH 1440

Query: 319  -----------VQPDVVTFSVIMDELCKNGKMDKASRLLELM------------------ 349
                       V+ DV     I+D   K G    A ++ E M                  
Sbjct: 1441 ELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFH 1500

Query: 350  --------IWR-----GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN-GCMHDVVS 395
                    +WR     GV P+  T+ +L+   C    +D A   FVS+  + G    V  
Sbjct: 1501 KQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDH 1560

Query: 396  YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            ++ +I+   +   V EA  L   ML    KP+  T+N L          ERAL++
Sbjct: 1561 FSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 156/357 (43%), Gaps = 28/357 (7%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA  + + ML+    P  ++ +  L     K  + D  L + + L S G +PD+ T SI
Sbjct: 1281 DEANNVLELMLKNGFDPGAIT-YGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
             I+   K GR+     +L  +LR+   P+ VT+ +L+KG C  S   +A  LF   R   
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 208  CEPDVFTYNTLINGL----------CRTGHTIV--ALNLFEEMANGNGEFGVVCKPNTVT 255
            CEPD  TY TL+  L               ++V     L  E+++   E  +  + +   
Sbjct: 1400 CEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSS-KLEASIEVEADVRL 1458

Query: 256  YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
               I+D   K G    A+++F  M   N    VV +++++  + +     +A  L+  M 
Sbjct: 1459 GCAIVDMFGKCGSPQDARKVFEGMDQRN----VVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 316  DQGVQPDVVTFSVIMDELCKNGKMDKA-SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             +GV+PD VTF  ++   C  G +D A    + +    G+ P    ++ +ID       +
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLV 1574

Query: 375  DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            + A  L + M    C     ++N L++ Y    D E AL +        + PT  +Y
Sbjct: 1575 NEAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERALRVAE------LNPTQASY 1622


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/424 (35%), Positives = 226/424 (53%), Gaps = 45/424 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL +F +M+   P P  +  F  L   +AK K +D V++L K L   G+  D+YT ++
Sbjct: 53  NEALDLFSHMVESRPLPS-IIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+NCFC+  +       LG++++  F                                  
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGF---------------------------------- 137

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD+FT+ +LING C       A+++  +M     E G+  KP+ V Y TIID LCK G
Sbjct: 138 -EPDIFTFTSLINGFCLGNRIEEAMSMVNQMV----EMGI--KPDVVIYTTIIDSLCKNG 190

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A  LF +M++  I PDVV YTS++ G C +  W +A  L   MM + ++PDV+TF+
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K GK+  A  L   MI   + PN +TY +LI+G C+  ++D AR++F  ME+ 
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  DVV+Y +LIN +CK K VE+A+ ++ EM  KG+    +TY TL  G   + +   A
Sbjct: 311 GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE---LNIVSYNCL 504
            ++F  M    V  +  TYN  +  LC +G V +AL +F  ++  + +    NI +YN L
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430

Query: 505 IDGL 508
           + GL
Sbjct: 431 LHGL 434



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 205/375 (54%), Gaps = 10/375 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ + + M+ M   P  V  +  +   L KN H D  LSLF ++ + G+ PD+  ++ L
Sbjct: 159 EAMSMVNQMVEMGIKPD-VVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL 217

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N  C  GR     ++L  +++    P+ +TF +LI     E ++++A  L+ +    + 
Sbjct: 218 VNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSI 277

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++FTY +LINGLC  G    A  +F  M          C P+ V Y ++I+G CK   
Sbjct: 278 APNIFTYTSLINGLCMEGRLDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKK 331

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A ++F +M  + +  + +TYT++I+GF      N A+ +F  M+ +GV P++ T++V
Sbjct: 332 VEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNV 391

Query: 329 IMDELCKNGKMDKASRLLELMIWR---GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++  LC NGK++KA  + E M  R   GV PN  TYN L+ G C   K++ A  +F  M+
Sbjct: 392 LLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQ 451

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                  +++Y  +I   CK   V++AL+L+  + SKG+KP VVTY T+  GLF    + 
Sbjct: 452 KRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLML 511

Query: 446 RALKLFDEMRRNHVA 460
            A  LF +M+ + V+
Sbjct: 512 EAHVLFRKMKEDGVS 526



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 115/217 (52%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  ++R   ++  +NEA  LF  M++    P ++ F+ +++ + K  K D    L + + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             GV+ + YT N L++ +C + +   A      +   G   D+ ++ +LIN +C    +E
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA+S+ ++M+  GIKP VV Y T+   L +   V+ AL LF++M    +  D   Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +GLC SG   +A  L R +   K + +++++N LID 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 171/520 (32%), Positives = 259/520 (49%), Gaps = 86/520 (16%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L++F+ E C  SG      + P +AL +FD +L+    P  + + N L   +A+     +
Sbjct: 65  LEQFIGE-CYRSGD-----LGPEDALDLFDELLQ-RARPGSIYALNQLLTTVARAPVSSS 117

Query: 126 V-------LSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           V       +S+F R+  AG   + PDI T  ILI+C C  G ++ GF  LG+I+++    
Sbjct: 118 VRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRA 177

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNL 234
            AVTFT L++ LCAE R  +A  +  +      C PDVF+Y TL+ GLC       A  L
Sbjct: 178 QAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAEL 237

Query: 235 FEEMANGN--------------------GEFG----VVCK-------PNTVTYNTIIDGL 263
              MA                       G+ G    + CK       PN VT N++IDGL
Sbjct: 238 IHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 297

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK   +DKA+ +  +M DE+I P+  TY S+I G+  +  W EA R+  EM   G +P+V
Sbjct: 298 CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 357

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG---------------- 367
           VT+S+++D LCK+G   +A  +   MI  G  PN  TY +L+ G                
Sbjct: 358 VTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDL 417

Query: 368 -------------------YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
                              YC   ++D A   F  M+  G M D+V+Y T+I+  CK   
Sbjct: 418 MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGR 477

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAADTYTYN 467
           +++A+S + +M+  G+ P ++T+NTL  G F +H + E+A +LF EM    +  +  T+N
Sbjct: 478 LDDAMSRFCQMIDDGLSPDIITFNTLIHG-FALHGKWEKAEELFYEMMDRGIPPNVNTFN 536

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + ID L K G V EA +LF  +  +  + N+VSYN +I G
Sbjct: 537 SMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHG 576



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 212/430 (49%), Gaps = 28/430 (6%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+      +A  +F  ML  H  PP V + N +   L K +  D   ++ +++    +
Sbjct: 265 EGDVG-----KAYTLFCKMLD-HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+  T++ LI+ +   G+ +    +L  + R    PN VT++ LI  LC      EA  
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +F        +P+  TY +L++G    G+ +V +N  +++   NG      +P    +N 
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGN-LVDMNNVKDLMVQNG-----MRPGRHVFNI 432

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            I   CK G +D+A   F KM+ +   PD+V YT+VI G C     ++A   F +M+D G
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + PD++TF+ ++     +GK +KA  L   M+ RG+ PN  T+N++ID      K+  AR
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           KLF  M   G   +VVSYNT+I+ Y    +V E + L  +ML  G+KPT VT+NTL  G+
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 612

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
                V   LK            D  T    ID  C+ G + + L LFR +     + + 
Sbjct: 613 -----VSMGLK-----------PDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDT 656

Query: 499 VSYNCLIDGL 508
           ++ N  + G+
Sbjct: 657 ITENIKLRGV 666


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/424 (36%), Positives = 226/424 (53%), Gaps = 41/424 (9%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T + A+  F+ MLRM P PP    FN L   +AK KH+ T+LSL  +++S G+ P+IYT 
Sbjct: 41  TIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILIN FC + R                                  +I EA  LF K   
Sbjct: 100 HILINSFCHLNR---------------------------------GKIGEALHLFDKMIG 126

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PDV TY TLINGLC+ G+T  A+ L   M   N      C+PN   YNTIID LCK
Sbjct: 127 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAYNTIIDSLCK 180

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V +A  LF +M  + I+PD+ TY S+I   C   +W     L  EM+D  + PDVV+
Sbjct: 181 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 240

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           F+ ++D LCK GK+ +A  +++ MI RG   PN  +YNTLI+GYC   +ID A  LF  M
Sbjct: 241 FNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 300

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
                + D V+Y+TLI+  C  + +++A++L+ EM++    P +VTY  L   L +   +
Sbjct: 301 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 360

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A+ L   +  +++  D    N  IDG+C++G +  A +LF  +     + ++ +Y+ +
Sbjct: 361 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 420

Query: 505 IDGL 508
           I+GL
Sbjct: 421 INGL 424


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 242/428 (56%), Gaps = 9/428 (2%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           I  +  +++L +F +M++  P  P ++ F+ L   ++K K YD V+ L++++   G+  +
Sbjct: 57  IRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + T +IL+NCFC+  ++S     LG++++    P+ VTF SL+ G C   R+ +A  +F 
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTII 260
           +      +P+V  YNT+I+GLC++     AL+L   M  +G G       P+ VTYN++I
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDVVTYNSLI 228

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            GLC  G    A  +   M    I PDV T+ ++I         +EA+  + EM+ + + 
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD+VT+S+++  LC   ++D+A  +   M+ +G  P+  TY+ LI+GYC + K++H  KL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M   G + + V+Y  LI  YC+   +  A  ++  M+  G+ P ++TYN L  GL +
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             ++E+AL +  +M++N + AD  TYN  I G+CK+G V +A +++ ++       +I +
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 501 YNCLIDGL 508
           Y  ++ GL
Sbjct: 469 YTTMMLGL 476



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 176/338 (52%), Gaps = 7/338 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M+ M    P V  +N +   L K+K  D  L L  R+   G+ PD+ T++ L
Sbjct: 169 DALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  GR S    ++  + +    P+  TF +LI     E R+ EA   + +    + 
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PD+ TY+ LI GLC       A  +F  M +        C P+ VTY+ +I+G CK   
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKK 341

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+   +LF +M    +  + VTYT +I+G+C A   N A+ +F  M+  GV P+++T++V
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC NGK++KA  +L  M   G++ +  TYN +I G C   ++  A  ++ S+   G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            M D+ +Y T++    K     EA +L+ +M   GI P
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 244/438 (55%), Gaps = 11/438 (2%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           +ER +S     ++ I  N+AL +F  M    P P  V  F+ L   +AK K Y+ V+SLF
Sbjct: 42  RERLRSG----LHSIKFNDALTLFCDMAESRPLPSIVD-FSRLLVAIAKLKKYEAVISLF 96

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           + +   G+  D+Y+ S LI+CFC+  R+S     LG++++  F P+ VTF SL+ G C  
Sbjct: 97  RHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 156

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           +RI EA +L  +      EP+V  YNT+I+ LC       AL++   M     + G+  +
Sbjct: 157 NRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHME----KMGI--R 210

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ +TYN++I  L   G    +  +   M    I+PDV+T++++I  F       EAK+ 
Sbjct: 211 PDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQ 270

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           + EM+ + V P++VT++ +++ LC +G +D+A ++L  M+ +G  PN  TYNTL++GYC 
Sbjct: 271 YDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCK 330

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           + ++D A K+   M  +G   D  +YNTL   YC+      A  + + M+S G+ P + T
Sbjct: 331 SKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYT 390

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +N L  GL E  ++E+AL   ++++++       TYN  I G+CK+  V +A  LF ++ 
Sbjct: 391 FNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLA 450

Query: 491 DSKYELNIVSYNCLIDGL 508
                 ++++Y  ++ GL
Sbjct: 451 LKGVSPDVITYTTMMIGL 468



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 35/253 (13%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y   +R   ++  +N+A  LF +M +    P +V FS ++  + K  K +    L   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 351 WRGVNPNTYTYNTLID-----------------------------------GYCLTDKID 375
             G++ + Y+++TLID                                   G+C  ++I 
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   +   G   +VV YNT+I+  C+N+ V+ AL + + M   GI+P V+TYN+L 
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             LF   +   + ++  +M R  +  D  T++  ID   K G +LEA + +  +     +
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 496 LNIVSYNCLIDGL 508
            NIV+YN LI+GL
Sbjct: 281 PNIVTYNSLINGL 293



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 70/135 (51%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L+    +   ++    +  R+ S G+ PDIYT ++L++  C+ G++    V L  +
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +S      +T+  +IKG+C  +++ +A  LF    +    PDV TY T++ GL R    
Sbjct: 415 QKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLW 474

Query: 229 IVALNLFEEMANGNG 243
           + A  L+ +M   +G
Sbjct: 475 LEAHELYRKMKKDDG 489


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 225/423 (53%), Gaps = 9/423 (2%)

Query: 88  NEALCIFDYMLRMHP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +E+L  F + L+ +P S P  SS N L   L K KHYD V+S+  ++ S  +FP   + S
Sbjct: 39  SESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLS 98

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI  F    + S  F VLG I++  F  N   F  L+KG C      +A  LF   +  
Sbjct: 99  ALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRN 158

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD  +YNT+INGLC+    + A  LF+EM  G       CKPN+VT++ +IDG CK 
Sbjct: 159 CLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGE------CKPNSVTFSALIDGFCKN 212

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V++   L  +M+   +  DV  Y+++I GFC   D    K LF EM+ + V P+VVT+
Sbjct: 213 GDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTY 272

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S +M+ LCK  K  +A+++L+ M    V P+   Y  L DG     +   A K+   M  
Sbjct: 273 SCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVK 332

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   + V+YN +IN  CK   V++AL +   M  KG KP VVTY+TL  GL  + +++ 
Sbjct: 333 RGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDE 392

Query: 447 ALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           A+ L + +  +  H+  D + +N  I  LCK   +  A  ++  + +  +  NIV+YN L
Sbjct: 393 AVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNIL 452

Query: 505 IDG 507
           IDG
Sbjct: 453 IDG 455



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 206/440 (46%), Gaps = 43/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F+ L     KN   +    L + +   GL  D++ +S LI+ FC  G +  G  +
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR   TPN VT++ L+  LC + +  EAA +          PDV  Y  L +GL +
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ + + M    GE     +PN VTYN II+GLCKEG VD A  +   M  +  
Sbjct: 317 NGRASDAIKVLDLMVK-RGE-----EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGK 370

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDKA 342
            PDVVTY+++++G C     +EA  L   +M +   ++PDV  F++++ ELCK  ++  A
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHA 430

Query: 343 SRLLELMIWRG-----------------------------------VNPNTYTYNTLIDG 367
            R+   M+ RG                                   ++PN  TY  LI+G
Sbjct: 431 KRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLING 490

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C    +  A+ LF    ++G    V  YNTL+   C+   VE+A +L+ EM +    P 
Sbjct: 491 LCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPD 550

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VV++N +  G  +   VE A +L  EM   ++  D  T++  I+   K G + EA  L+ 
Sbjct: 551 VVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYE 610

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +    +  + V ++ L+ G
Sbjct: 611 RMVSCGHVPDAVLFDSLLKG 630



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 197/405 (48%), Gaps = 5/405 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ MLR + +P  V +++ L   L K + +     +   +    + PD+  +++L +  
Sbjct: 256 LFNEMLRKNVTPN-VVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGL 314

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K GR S    VL  +++    PN VT+ ++I GLC E R+ +A  +         +PDV
Sbjct: 315 SKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDV 374

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY+TL+ GLC  G    A++L   + +   EF +  KP+   +N +I  LCK+  +  A
Sbjct: 375 VTYSTLVKGLCGVGKIDEAVDLLNLLMSK--EFHI--KPDVFAFNLVIQELCKQRRLRHA 430

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K ++  M +     ++VTY  +I G+  A    +A  L+ + +D G+ P+  T++V+++ 
Sbjct: 431 KRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLING 490

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK   +  A  L       G  P    YNTL+   C    ++ AR LF  M +     D
Sbjct: 491 LCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPD 550

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VVS+N +I+   K  DVE A  L  EML+  + P  +T++ L     ++ Q++ A  L++
Sbjct: 551 VVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYE 610

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
            M       D   +++ + G    G   + + + + + D    L+
Sbjct: 611 RMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 183/372 (49%), Gaps = 8/372 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L   L+KN      + +   +   G  P+  T++ +IN  CK GRV     +
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--KHRVFACEPDVFTYNTLINGL 222
           L  + +    P+ VT+++L+KGLC   +I EA  L      + F  +PDVF +N +I  L
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A  ++  M     E G     N VTYN +IDG    G + KA EL+    D 
Sbjct: 422 CKQRRLRHAKRVYYTMV----ERGF--PSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I+P+  TYT +I G C     + AK LF +    G +P V  ++ +M  LC+   +++A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L + M     +P+  ++N +IDG      ++ A++L + M +   + D ++++ LIN 
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           + K   ++EA SLY  M+S G  P  V +++L  G     + E+ + +  +M    V  D
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655

Query: 463 TYTYNNFIDGLC 474
           +   +  +  LC
Sbjct: 656 SKLTSTILACLC 667



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 141/270 (52%), Gaps = 4/270 (1%)

Query: 243 GEFGVVCKP----NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
           G  G++ K     N   +N ++ G C+ G   KA +LF  MK   + PD V+Y +VI G 
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      EAK LF EM     +P+ VTFS ++D  CKNG +++   LLE M   G+  + 
Sbjct: 175 CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           + Y+ LI G+C    I+  ++LF  M       +VV+Y+ L+N  CK +  +EA  +   
Sbjct: 235 FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M    ++P VV Y  L  GL +  +   A+K+ D M +     +  TYN  I+GLCK G 
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V +AL +   +     + ++V+Y+ L+ GL
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGL 384



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 105/223 (47%)

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P   +  ++I     A  ++    +  +M    V P   + S +++      K   A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L L++ RG + N Y +N L+ G+C +     A  LF  M+ N  + D VSYNT+IN  CK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            K + EA  L+ EM     KP  VT++ L  G  +   VE    L +EM +  +  D + 
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y+  I G C  G +    ELF  +       N+V+Y+CL++ L
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 142/417 (34%), Positives = 219/417 (52%), Gaps = 9/417 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD ML    SP  V +++IL     K   Y   + L   + + G  PDI T+++L
Sbjct: 180 DALAVFDDMLHRGCSPS-VVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C  G V     +L  +      P+AVT+T ++K LC   R  E   LF +     C
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+NT++  LC+ G    A+ + + M+    E G  C P+ VTY++I+DGLC  G 
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMS----EHG--CIPDIVTYSSILDGLCDVGR 352

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A EL  ++K     PD + YT+V++G C    W  A+ L  EM+     PD VTF+ 
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+ G +D+A +++E M   G NP+  TYN++IDG C    ID A +L  +++S G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+V++NTL+   C     E+A  L   M+     P   T+NT+   L +   + +A+
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +    M  N    +  TYN  +D L K+G   EAL+L   + +   +L  ++YN +I
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDL--ITYNTVI 587



 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 212/406 (52%), Gaps = 14/406 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P PV   NIL   L           +F  L ++     + T++ ++N +C+ GR+     
Sbjct: 95  PLPVVPCNILIKRLCSGGRVADAERVFATLGASAT---VVTYNTMVNGYCRAGRIEDARR 151

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++  +    F P+  TF  LI+ LC   R+ +A A+F       C P V TY+ L++  C
Sbjct: 152 LISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATC 208

Query: 224 RTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           +      A+ L +EM A G       C+P+ VTYN +I+ +C EG VD+A  +   +   
Sbjct: 209 KASGYRQAMVLLDEMRAKG-------CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH 261

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              PD VTYT V++  C +  W E + LF EM      PD VTF+ I+  LC+ G +D+A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            ++++ M   G  P+  TY++++DG C   ++D A +L   ++S GC  D ++Y T++  
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKG 381

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C  +  E A  L +EM+     P  VT+NT+   L +   V+RA+K+ ++M  N    D
Sbjct: 382 LCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN+ IDGLC    + +A+EL   ++    + +IV++N L+ GL
Sbjct: 442 IVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 205/407 (50%), Gaps = 6/407 (1%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P PP   +FN L   L         L++F  +   G  P + T+SIL++  CK       
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
            V+L  +      P+ VT+  LI  +C E  + EA  + +      C+PD  TY  ++  
Sbjct: 217 MVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC +        LF EMA+        C P+ VT+NTI+  LC++G VD+A ++   M +
Sbjct: 277 LCGSERWKEVEELFAEMASNK------CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE 330

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               PD+VTY+S++ G C     ++A  L   +   G +PD + ++ ++  LC   + + 
Sbjct: 331 HGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEH 390

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L+  M+     P+  T+NT+I   C    +D A K+   M  NGC  D+V+YN++I+
Sbjct: 391 AEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIID 450

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C  + +++A+ L S + S G KP +VT+NTL  GL  + + E A +L   M  +    
Sbjct: 451 GLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP 510

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  T+N  I  LC+ G +L+A+E  + + ++    N  +YN ++D L
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDAL 557



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 214/411 (52%), Gaps = 17/411 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN +   L +    D  + +   ++  G  PDI T+S +++  C +GRV     +
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+      P+ + +T+++KGLC+  +   A  L  +     C PD  T+NT+I  LC+
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ + E+M+  NG     C P+ VTYN+IIDGLC E  +D A EL   ++    
Sbjct: 420 KGLVDRAIKVVEQMSE-NG-----CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC 473

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VT+ ++++G C  + W +A++L + MM     PD  TF+ ++  LC+ G + +A  
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L++M   G  PN  TYN ++D      K   A KL   M +NG   D+++YNT+I+   
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM-TNG-TPDLITYNTVISNIT 591

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEAL L   M+S G+ P  +TY +L  G+      +RA+++   ++   ++ D  
Sbjct: 592 KAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDAT 651

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI-------RDSKY--ELNIVSYNCLID 506
            YN+ + G C++     A++ F  +        +S Y   L  ++Y CL+D
Sbjct: 652 FYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLD 702



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 165/341 (48%), Gaps = 8/341 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+ +   P   ++  +   L   + ++    L   +  +   PD  T + +I   C+ G 
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     V+ ++  +   P+ VT+ S+I GLC E  I +A  L +  + + C+PD+ T+NT
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L+ GLC       A  L   M + +      C P+  T+NT+I  LC++G + +A E   
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSD------CPPDATTFNTVITSLCQKGLLLQAIETLK 536

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M +    P+  TY  V+     A    EA +L   M +    PD++T++ ++  + K G
Sbjct: 537 IMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAG 594

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           KM++A  LL +M+  G++P+T TY +L  G C  D  D A ++   ++  G   D   YN
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            ++  +C+N   + A+  ++ M+S G  P   TY  L   L
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 8/321 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +FN +   L +    D  + + ++++  G  PDI T++ +I+  C    +     
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      P+ VTF +L+KGLC+  R  +A  L        C PD  T+NT+I  LC
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC 523

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G  + A+   + MA  NG     C PN  TYN ++D L K G   +A +L   M   N
Sbjct: 524 QKGLLLQAIETLKIMAE-NG-----CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--N 575

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD++TY +VI     A    EA  L   M+  G+ PD +T+  +   +C+    D+A 
Sbjct: 576 GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAI 635

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R+L  +   G++P+   YN ++ G+C   + D A   F  M S+GCM D  +Y  L+   
Sbjct: 636 RMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695

Query: 404 CKNKDVEEALSLYSEMLSKGI 424
                ++EA  L   + S G+
Sbjct: 696 AYECLLDEAKQLLVNLCSLGV 716



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 8/286 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L   +  D  + L   L S G  PDI T + L+   C + R      +
Sbjct: 440 PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++ S   P+A TF ++I  LC +  +++A           C P+  TYN +++ L +
Sbjct: 500 MVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLK 559

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  AL L   M NG         P+ +TYNT+I  + K G +++A +L   M    +
Sbjct: 560 AGKTQEALKLLSGMTNGT--------PDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD +TY S+  G C  +  + A R+   + D G+ PD   ++ I+   C+N + D A  
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
               M+  G  P+  TY  L++       +D A++L V++ S G +
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVL 717


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 232/421 (55%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +F +M+     P   +   ++ G L+  K +  V+ + + +++ GL PD   +++
Sbjct: 219 DRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGK-WKEVVQMLQEMSTHGLQPDCVIYAV 277

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR +    +   ++R    P+   +  L+ G   E  + E  +         
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNG 337

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N + N   +      A+++F++M            P  V Y  +ID LCK G
Sbjct: 338 VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ------WLSPGVVNYGALIDALCKLG 391

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F +M +E + PD+  ++S++ G C  + W +A++LF E++DQG++ +   F+
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++M  LC+ G++ +A RL++LM+   V P+  +YNTL+DG+CLT +ID A KL   M S 
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D  +YNTL++ YCK + +++A SL+ EML KG+ P VVTYNT+  GLF+I +   A
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M  N    D YTY   ++GLC++ FV EA ++F+++     +L+I + N +I  
Sbjct: 572 KELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGA 631

Query: 508 L 508
           L
Sbjct: 632 L 632



 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 161/502 (32%), Positives = 254/502 (50%), Gaps = 57/502 (11%)

Query: 52  LKESLRLTVK-DRA-SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSS 109
           +  S R+T   DR   L++ +  R +S   G       ++AL +FD ML  +  P  V +
Sbjct: 1   MSRSRRVTAAADRCLELERVIAGRARSGSLG------LDDALKLFDEML-TYARPASVRT 53

Query: 110 FNILFGCLAKNK---HYDTVLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           FN L   +++ +     + V+SLF R+    S  + P   T++ILI CFC+MGR+ HGF 
Sbjct: 54  FNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFA 113

Query: 164 VLGRILRSCFT-PNAVTFTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLING 221
             G IL++ ++  N V F  L+KGLC   R+ EA   L  +   F C  +V +YN L+ G
Sbjct: 114 AFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKG 173

Query: 222 LCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           LC       AL L   MA+ G+G       PN VTY T+IDGLCK   VD+AK +F  M 
Sbjct: 174 LCNEKRAEEALELMHMMADDGDGSH----TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI 229

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D+ + P+  TYT +I G+     W E  ++  EM   G+QPD V ++V++D LCKNG+  
Sbjct: 230 DKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCT 289

Query: 341 KASRL-----------------------------------LELMIWRGVNPNTYTYNTLI 365
           +A  +                                   L+LM+  GV+P+ + +N + 
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMF 349

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           + Y     ID A  +F  M        VV+Y  LI+  CK   V++A+  +++M+++G+ 
Sbjct: 350 NAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVT 409

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P +  +++L  GL  + + E+A KLF E+    +  +   +N  +  LC+ G V+EA  L
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
              +       +++SYN L+DG
Sbjct: 470 IDLMLRVDVRPDVISYNTLVDG 491



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 197/412 (47%), Gaps = 7/412 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            D M+R   SP     FNI+F   AK    D  + +F ++    L P +  +  LI+  C
Sbjct: 330 LDLMVRNGVSPDH-HIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALC 388

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K+GRV    +   +++    TP+   F+SL+ GLC   +  +A  LF +        +  
Sbjct: 389 KLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAA 448

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            +N L+  LCR G  + A  L + M        V  +P+ ++YNT++DG C  G +D+A 
Sbjct: 449 FFNILMCNLCREGRVMEAQRLIDLM------LRVDVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M    + PD  TY +++ G+C A   ++A  LF EM+ +G+ P VVT++ I+  L
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            + G+  +A  L   MI      + YTY  +++G C  + +D A K+F S+ S     D+
Sbjct: 563 FQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDI 622

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            + N +I    K    E+A+ L++ + + G+ P V TY  +   L +   +E   +LF  
Sbjct: 623 FTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSA 682

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           M  N  A ++   N  +  L   G +  A      + +  + L   + + LI
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 201/420 (47%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD ++R     P V+ + IL    A       + S    +   G+ PD +  +I+
Sbjct: 290 EARNIFDSLIR-KGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIM 348

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            N + K   +     +  ++ +   +P  V + +LI  LC   R+ +A   F +      
Sbjct: 349 FNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGV 408

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+F +++L+ GLC       A  LF E+ +         + N   +N ++  LC+EG 
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG------IRLNAAFFNILMCNLCREGR 462

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A+ L   M   ++ PDV++Y +++ G C     +EA +L   M+  G++PD  T++ 
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT 522

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK  ++D A  L   M+ +G+ P   TYNT++ G     +   A++L+++M +N 
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNR 582

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +Y  ++N  C+N  V+EA  ++  + SK ++  + T N +   L +  + E A+
Sbjct: 583 RKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAM 642

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  +    +  D  TY    + L K G + E  ELF A+ ++    N    N L+  L
Sbjct: 643 DLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWL 702



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 158/392 (40%), Gaps = 65/392 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS- 146
           +EA+ IFD M R     P V ++  L   L K    D  +  F ++ + G+ PDI+  S 
Sbjct: 359 DEAMHIFDKM-RQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSS 417

Query: 147 ----------------------------------ILINCFCKMGRVSHGFVVLGRILRSC 172
                                             IL+   C+ GRV     ++  +LR  
Sbjct: 418 LVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD 477

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+ +++ +L+ G C   RI EAA L         +PD FTYNTL++G C+      A 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAY 537

Query: 233 NLFEEMA---------------NGNGEFGVVC--------------KPNTVTYNTIIDGL 263
           +LF EM                +G  + G  C              K +  TY  I++GL
Sbjct: 538 SLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGL 597

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C+  FVD+A ++F  +  +++  D+ T   +I          +A  LF  +   G+ PDV
Sbjct: 598 CRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDV 657

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T+ +I + L K G +++   L   M   G  PN+   N L+        I  A      
Sbjct: 658 ETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSK 717

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           ++      +  + + LI+ Y + +  + A SL
Sbjct: 718 LDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 223/414 (53%), Gaps = 9/414 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR     P V ++  L    A+ K  +  + L + +   G  P++ T+++L++  CK+  
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     V+ +++   F PN +TF SL+ G C    + +A  L          P+V TY+ 
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 289

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+GLC++   + A  + EEM       GV   P+  TY+ +I GLCK   +++A+++  
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKT----RGVT--PDAFTYSALIHGLCKADKIEEAEQMLR 343

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M      PDVV Y+S+I  FC +    EA++   EM  Q   PDVVT++ ++D LCK G
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403

Query: 338 KMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           K+ +A  +LE M   G V P+  TY+T+I+G C +D +  A+KL   M   GC  DVV+Y
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 463

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            T+I+  CK   +EEA  L   M   G  P VVTY TL  GL +  +V+ A ++ +EMR 
Sbjct: 464 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 523

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL--NIVSYNCLIDGL 508
                +  TYN  ++GLC SG + EA +L + ++D + E   +  +Y  +++ L
Sbjct: 524 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 577



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 224/401 (55%), Gaps = 10/401 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+N L   L + K +     LF+    A   PD+ +++I+I+ FC  G +     +L  +
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
             + F P+A T T +I  + A +  ++ A      R   C+P+V TY  LI    R    
Sbjct: 139 KSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L EEM     E G  C PN VTYN ++D LCK   V  A+++  KM +    P+V
Sbjct: 196 EEAMKLLEEMR----ERG--CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +T+ S++ GFC   + ++A++L   M+ +G++P+VVT+S ++D LCK+ K  +A  +LE 
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P+ +TY+ LI G C  DKI+ A ++   M  +GC  DVV Y+++I+ +CK+  
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN-HVAADTYTYN 467
           + EA     EM  +   P VVTYNT+  GL ++ ++  A  + ++M+ +  V  D  TY+
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I+GLCKS  ++EA +L   +  +    ++V+Y  +IDGL
Sbjct: 430 TVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 470



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 217/434 (50%), Gaps = 33/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NI+             L L + + SAG  PD +TH+ +I      G +      
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +   C  PN VT+T+LI       ++ EA  L  + R   C P++ TYN L++ LC+
Sbjct: 170 LRSM--GC-DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 225 TGHTIVALNLFEEMANGNGEFGVV---------CK--------------------PNTVT 255
                 A ++ ++M  G     V+         CK                    PN VT
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+ +IDGLCK     +AKE+  +MK   + PD  TY+++I G C A+   EA+++   M 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G  PDVV +S I+   CK+GK+ +A + L+ M  +  +P+  TYNT+IDG C   KI 
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 376 HARKLFVSMESNG-CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            A+ +   M+ +G  + DVV+Y+T+IN  CK+  + EA  L   M   G  P VVTY T+
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  ++E A  L   M+R   A +  TY   I GLCK+  V EA  +   +R++  
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526

Query: 495 ELNIVSYNCLIDGL 508
             N+V+YN +++GL
Sbjct: 527 PPNLVTYNTMVNGL 540



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 204/400 (51%), Gaps = 33/400 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ + + M R    PP + ++N+L   L K         + K++   G  P++ T + 
Sbjct: 196 EEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G V     +LG ++     PN VT+++LI GLC   + +EA  +  + +   
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK-------- 250
             PD FTY+ LI+GLC+      A  +   MA       VV         CK        
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRG 297
                       P+ VTYNT+IDGLCK G + +A+ +  +M++  ++ PDVVTY++VI G
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVING 434

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C ++   EA++L   M   G  PDVVT++ I+D LCK G++++A  LL+ M   G  PN
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             TY TLI G C   K+D A ++   M + GC  ++V+YNT++N  C +  ++EA  L  
Sbjct: 495 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 554

Query: 418 EMLSKGIK--PTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            M     +  P   TY T+   L     V+ A +L ++M+
Sbjct: 555 RMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 177/319 (55%), Gaps = 7/319 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K++ +     + + + + G+ PD +T+S LI+  CK  ++     +
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+  S  TP+ V ++S+I   C   +++EA     + R     PDV TYNT+I+GLC+
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  + E+M     E G V  P+ VTY+T+I+GLCK   + +A++L  +M     
Sbjct: 402 LGKIAEAQVILEQMQ----ESGDVL-PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPDVVTYT++I G C      EA+ L   M   G  P+VVT++ ++  LCK  K+D+A R
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN--GCMHDVVSYNTLINW 402
           ++E M   G  PN  TYNT+++G C++ +I  A++L   M+     C  D  +Y T++N 
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576

Query: 403 YCKNKDVEEALSLYSEMLS 421
              +  V+EA  L  +M S
Sbjct: 577 LMSSDLVQEAEQLLEQMKS 595



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 32/187 (17%)

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G +   +++N+L+       K   A  LF S     C  DV SYN +I+ +C   D+  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 413 LSLYSEMLSKGIK--------------------------------PTVVTYNTLFLGLFE 440
           L L  EM S G                                  P VVTY  L      
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             ++E A+KL +EMR      +  TYN  +D LCK   V  A ++ + + +  +  N+++
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251

Query: 501 YNCLIDG 507
           +N L+DG
Sbjct: 252 FNSLVDG 258


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 148/405 (36%), Positives = 220/405 (54%), Gaps = 43/405 (10%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+   ++ G   +N   D V  LF  +   GLF D  T+ ILIN  CK  +      
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAV-QLFDEMTEKGLFGDAKTYGILINGLCKARK------ 127

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
                     T  A+     +KG C                    + DVFTY  +I+ LC
Sbjct: 128 ----------TGLAIKLHEKMKGNC--------------------KGDVFTYGMIIDSLC 157

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T  AL++F EM       G    P+ V Y++++DGLC+ G + +A E F +M+   
Sbjct: 158 KDGMTTEALDMFSEM------IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+ DV TY S+I G   A  W E       M+D+G  PD  TF++++D LCK GK+ +A 
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++LELM  +G  P+  TYNTL++G CL  +++ A KLF S+   G   +V SYN LIN Y
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK++ ++EA  L+ EM  KG+KP+ VTYNTL   L +  +V  A KLF EM+        
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 391

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   +DGLCK+G + EA++LF++I+ ++++ NI  ++ L+DG+
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 219/407 (53%), Gaps = 17/407 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRL--NSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
             ++ IL   L K +     + L +++  N  G   D++T+ ++I+  CK G  +    +
Sbjct: 112 AKTYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDSLCKDGMTTEALDM 168

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   P+ V ++SL+ GLC   R+ EA   F +        DV+TYN+LI+GL R
Sbjct: 169 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 228

Query: 225 TG---HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            G        LNL  +             P+  T+  +IDGLCKEG V +A+++   M  
Sbjct: 229 AGLWKEVTWFLNLMVDRG---------FSPDAFTFTILIDGLCKEGKVGEAQQILELMHH 279

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           +   PD++TY +++ G C      +A +LF  + D+G++ +V +++++++  CK+ K+D+
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 339

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A RL E M  +G+ P+T TYNTLI   C + ++  A+KLFV M++ G    + +Y  L++
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 399

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CKN  +EEA+ L+  +     KP +  ++ L  G+    ++E A K FDE+ +N +  
Sbjct: 400 GLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEP 459

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           DT  YN  I+GLC  G + EA++L   + +     + +++N +I  L
Sbjct: 460 DTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 194/374 (51%), Gaps = 7/374 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +F  M+     P  V   +++ G L +       L  FK +   G+  D+YT++ L
Sbjct: 164 EALDMFSEMIGAGILPDVVVYSSLMDG-LCRFGRLKEALEFFKEMEGRGISADVYTYNSL 222

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+   + G        L  ++   F+P+A TFT LI GLC E ++ EA  +         
Sbjct: 223 IHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK 282

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           EPD+ TYNTL+NGLC  G    A  LFE +A+         K N  +YN +I+G CK+  
Sbjct: 283 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRG------IKLNVFSYNILINGYCKDQK 336

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A  LF +M+ + + P  VTY ++I   C +     A++LF+EM   G    + T+ V
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LCKNG +++A  L + +      PN   ++ L+DG C   K++ A K F  +  NG
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D ++YN LIN  C    + EA+ L  +M  KG  P  +T+N +   L + +++  A+
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516

Query: 449 KLFDEMRRNHVAAD 462
           +L +EMR  + + D
Sbjct: 517 QLLEEMRNRNFSPD 530



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 187/388 (48%), Gaps = 6/388 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++ ++   L K+      L +F  +  AG+ PD+  +S L++  C+ GR+        
Sbjct: 146 VFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 205

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +     + +  T+ SLI GL       E              PD FT+  LI+GLC+ G
Sbjct: 206 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 265

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  + E M +   E      P+ +TYNT+++GLC  G ++ A +LF  + D  I  
Sbjct: 266 KVGEAQQILELMHHKGKE------PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 319

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +V +Y  +I G+C     +EA RLF EM  +G++P  VT++ ++  LC++G++  A +L 
Sbjct: 320 NVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 379

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G      TY  L+DG C    ++ A  LF S++      ++  ++ L++  C+ 
Sbjct: 380 VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRA 439

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +EEA   + E+   G++P  + YN L  GL     +  A+KL  +M       D+ T+
Sbjct: 440 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 499

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKY 494
           N  I  L K   + EA++L   +R+  +
Sbjct: 500 NVIIQNLLKENEIHEAIQLLEEMRNRNF 527


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 194/311 (62%), Gaps = 6/311 (1%)

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
           AL  +     C+PD+ TY  ++NGLC+ G T +A NL  +M  G  E      P  + YN
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYN 55

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           TIIDGLCK   +D A  LF +M+ + I P+VVTY+S+I   C    W++A RL  +M+++
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            + PDV TFS ++D   K GK+ +A +L + M+ R ++P+  TY++LI+G+C+ D++D A
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           +++F  M S  C  DVV+YNTLI  +CK K VEE + ++ EM  +G+    VTYN L  G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           LF+    + A ++F EM  + V  +  TYN  +DGLCK+G + +A+ +F  ++ SK E  
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295

Query: 498 IVSYNCLIDGL 508
           I +YN +I+G+
Sbjct: 296 IYTYNIMIEGM 306



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L K KH D  L+LFK + + G+ P++ T+S LI+C C  GR S    +
Sbjct: 49  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 108

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+  TF++LI     E +++EA  L+ +    + +P + TY++LING C 
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 168

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +FE M + +      C P+ VTYNT+I G CK   V++  E+F +M    +
Sbjct: 169 HDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + VTY  +I+G   A D + A+ +F EM+  GV P+++T++ ++D LCKNGK++KA  
Sbjct: 223 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 282

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E +    + P  YTYN +I+G C   K++    LF ++   G   DVV+YNT+I+ +C
Sbjct: 283 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    EEA +L+ EM   G  P    YNTL          E + +L  EMR    A D  
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 402

Query: 465 T 465
           T
Sbjct: 403 T 403



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 194/346 (56%), Gaps = 6/346 (1%)

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             ++ R++     P+ VT+  ++ GLC       A  L  K      EP V  YNT+I+G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC+  H   ALNLF+EM           +PN VTY+++I  LC  G    A  L   M +
Sbjct: 61  LCKYKHMDDALNLFKEMETKG------IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             INPDV T++++I  F       EA++L+ EM+ + + P +VT+S +++  C + ++D+
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A ++ E M+ +   P+  TYNTLI G+C   +++   ++F  M   G + + V+YN LI 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              +  D + A  ++ EM+S G+ P ++TYNTL  GL +  ++E+A+ +F+ ++R+ +  
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             YTYN  I+G+CK+G V +  +LF  +     + ++V+YN +I G
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 340



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 202/379 (53%), Gaps = 6/379 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           ++L  R+ + G  PD+ T+ +++N  CK G     F +L ++ +    P  + + ++I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC    + +A  LF +       P+V TY++LI+ LC  G    A  L  +M        
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---- 116

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               P+  T++ +ID   KEG + +A++L+ +M   +I+P +VTY+S+I GFC  +  +E
Sbjct: 117 --INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK++F  M+ +   PDVVT++ ++   CK  ++++   +   M  RG+  NT TYN LI 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G       D A+++F  M S+G   ++++YNTL++  CKN  +E+A+ ++  +    ++P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           T+ TYN +  G+ +  +VE    LF  +    V  D   YN  I G C+ G   EA  LF
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354

Query: 487 RAIRDSKYELNIVSYNCLI 505
           + +++     N   YN LI
Sbjct: 355 KEMKEDGTLPNSGCYNTLI 373



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 6/386 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ ++   L K    D   +L  ++    L P +  ++ +I+  CK   +     +
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN VT++SLI  LC   R  +A+ L +        PDVFT++ LI+   +
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  L++EM   +        P+ VTY+++I+G C    +D+AK++F  M  ++ 
Sbjct: 134 EGKLVEAEKLYDEMVKRS------IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 187

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY ++I+GFC      E   +F EM  +G+  + VT+++++  L + G  D A  
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 247

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+  GV PN  TYNTL+DG C   K++ A  +F  ++ +     + +YN +I   C
Sbjct: 248 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 307

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VE+   L+  +  KG+KP VV YNT+  G       E A  LF EM+ +    ++ 
Sbjct: 308 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 367

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIR 490
            YN  I    + G    + EL + +R
Sbjct: 368 CYNTLIRARLRDGDREASAELIKEMR 393



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F++M+  H   P V ++N L     K K  +  + +F+ ++  GL  +  T++I
Sbjct: 173 DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI    + G       +   ++     PN +T+ +L+ GLC   ++ +A  +F   +   
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP ++TYN +I G+C+ G      +LF  ++      GV  KP+ V YNT+I G C++G
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 345

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A  LF +MK++   P+   Y ++IR      D   +  L  EM   G   D  T  
Sbjct: 346 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 405

Query: 328 VIMDELCKNGKMDKA 342
           ++ + L  +G++DK+
Sbjct: 406 LVTNML-HDGRLDKS 419



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 2/167 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP + ++N L   L KN   +  + +F+ L  + + P IYT++I+I   CK G+V  G+ 
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +      P+ V + ++I G C +    EA ALF + +     P+   YNTLI    
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           R G    +  L +EM +  G  G       VT N + DG   + F+D
Sbjct: 378 RDGDREASAELIKEMRS-CGFAGDASTIGLVT-NMLHDGRLDKSFLD 422


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 263/533 (49%), Gaps = 48/533 (9%)

Query: 10  FHFTSISISALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTV--KDRASLK 67
           FH T   +S    + + S P    P SS+S +      T S+ +   R++   K  AS  
Sbjct: 16  FHITRARVS----DNTVSRPFVLSPASSVSHHFTKLKATRSRKRLENRVSAVSKSEASGM 71

Query: 68  KFLKERCKSSGQGDINLI-----TPN---------------------------EALCIFD 95
               ++  S+  GD+N I     +PN                           E L   +
Sbjct: 72  NGRLQQIVSTPNGDLNGIGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLE 131

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
            M+     P  ++  +++ G   ++        + + L ++G  PD+ T+++LI  +CK 
Sbjct: 132 RMIYQGDIPDVIACTSLIRG-FCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKS 190

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G +     VL R+      P+ VT+ ++++ LC   ++ EA  +  +     C PDV TY
Sbjct: 191 GEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITY 247

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             LI   C       A+ L +EM          CKP+ VTYN +I+G+CKEG +D+A + 
Sbjct: 248 TILIEATCNDSGVGQAMKLLDEMRKKG------CKPDVVTYNVLINGICKEGRLDEAIKF 301

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
              M      P+V+T+  ++R  C    W +A+RL  +M+ +G  P VVTF+++++ LC+
Sbjct: 302 LNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCR 361

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
              + +A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC  D+V+
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YNTL+   CK+   + A+ + +++ SKG  P ++TYNT+  GL ++ + E A +L +EMR
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           R  +  D  TY+  + GL   G V EA+++F  +     + + V+YN ++ GL
Sbjct: 482 RKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 196/399 (49%), Gaps = 34/399 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L G   K+   D  L + +R++ A   PD+ T++ ++   C  G++     V
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEV 231

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L R + R C+ P+ +T+T LI+  C +S + +A  L  + R   C+PDV TYN LING+C
Sbjct: 232 LDRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 224 RTGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTV 254
           + G    A+     M     +  V+                             C P+ V
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T+N +I+ LC++  + +A ++  KM      P+ ++Y  ++ GFC     + A      M
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           + +G  PD+VT++ ++  LCK+GK D A  +L  +  +G +P   TYNT+IDG     K 
Sbjct: 411 VSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           ++A +L   M   G   D+++Y+TL+        V+EA+ ++ +M    IKP+ VTYN +
Sbjct: 471 EYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAI 530

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            LGL +  Q  RA+     M          TY   I+G+
Sbjct: 531 MLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 27/362 (7%)

Query: 49  TSKLKESLRLTVKDRASLKK----------FLKERCKSSGQGDINLITPNEALCIFDYML 98
           + KLKE++   V DR   ++           ++  C  SG G        +A+ + D M 
Sbjct: 222 SGKLKEAME--VLDRQMQRECYPDVITYTILIEATCNDSGVG--------QAMKLLDEM- 270

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R     P V ++N+L   + K    D  +     +   G  P++ TH+I++   C  GR 
Sbjct: 271 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRW 330

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +L  +LR   +P+ VTF  LI  LC +  +  A  +  K     C P+  +YN L
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPL 390

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++G C+      A+   E M +        C P+ VTYNT++  LCK+G  D A E+  +
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRG------CYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           +  +  +P ++TY +VI G         A  L  EM  +G++PD++T+S ++  L   GK
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A ++   M    + P+  TYN ++ G C   +   A      M   GC     +Y  
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 399 LI 400
           LI
Sbjct: 565 LI 566


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  257 bits (657), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 224/421 (53%), Gaps = 9/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N+A  +F  +L    +P  V+  +++ G C+A +  +D    LF  +N  G  P   T++
Sbjct: 27  NDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYN 84

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++I+  CK G +     ++ +++     P+ VT+ +++ GLC  SR+ EA  LF +    
Sbjct: 85  VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P+  ++NT+I GLC+      A  +F EM   +        P++ +Y  +IDGL K 
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD------IPPDSWSYGILIDGLAKA 198

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A +LF +M D  I P  VTY  VI G C A   +EA  LF  M  +G +P   TF
Sbjct: 199 GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D  CK GK+D+A RLL+ M   G  P+  TY+TLI G C   ++D AR L   M  
Sbjct: 259 NILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C   VV+ NTLI+  CK   ++EA  +   M+S G  P VVTYNTL  G     Q ER
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 378

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +L  +M    +A +  TY   + GLCK+  + EA  +F  ++ S    N+ +Y  LI 
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438

Query: 507 G 507
           G
Sbjct: 439 G 439



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 208/375 (55%), Gaps = 6/375 (1%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +N   + PD +++ ILI+   K G+++    +  ++L S  TP+ V +TSLI GLC  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
             +A  LF       C P   TYN +I+  C+ G    A +L ++M     E G V  P+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI----EDGHV--PD 114

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYNT++DGLCK   V++A  LF +M+     P+  ++ ++I G C  +  ++A ++F 
Sbjct: 115 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM  + + PD  ++ +++D L K GK+++A +L + M+  G+ P+  TYN +I G CL  
Sbjct: 175 EMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D A +LF SM S GC     ++N LI+ +CK   ++EA  L   M   G  P VVTY+
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  GL  I +V+ A  L ++M +        T N  I GLCK+G + EA E+  A+  S
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354

Query: 493 KYELNIVSYNCLIDG 507
               ++V+YN L+ G
Sbjct: 355 GQSPDVVTYNTLVHG 369



 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 214/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+ IL   LAK    +   +LF++L  +G+ P    ++ LI+  C          +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    P+ VT+  +I   C    + EA  L  K       PDV TYNT+++GLC+
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     AL LF EM        + C PN  ++NTII GLC++  +D+A ++F +M+ ++I
Sbjct: 128 SSRVEEALLLFNEMER------LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y  +I G   A   NEA +LF  M+D G+ P  VT++V++  +C    +D+A  
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G  P+ +T+N LID +C   K+D A +L   M  +G + DVV+Y+TLI+  C
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               V++A  L  +M+ +  KPTVVT NTL  GL +  +++ A ++ D M  +  + D  
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  + G C++G    A EL   +       N+V+Y  L+ GL
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405



 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 216/434 (49%), Gaps = 30/434 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M R    P PV+ +N++     K    +    L K++   G  PD+ T++ 
Sbjct: 62  DDARELFADMNRRGCPPSPVT-YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK  RV    ++   + R   TPN  +  ++I GLC +S+I +A  +F +     
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
             PD ++Y  LI+GL + G    A  LF+ M +       V                   
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                     C+P+  T+N +ID  CK G +D+A  L  +M D+   PDVVTY+++I G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C     ++A+ L  +M+ +  +P VVT + ++  LCK G++ +A  +L+ M+  G +P+ 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTL+ G+C   + + AR+L   M + G   +VV+Y  L++  CK   + EA  ++++
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M S G  P + TY  L LG     QV+  LKLF EM    ++ D   Y      LCKSG 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 479 VLEALELFRAIRDS 492
              ALE+ R  R+S
Sbjct: 481 SARALEILREGRES 494



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 206/444 (46%), Gaps = 44/444 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL +F+ M R+  +P   S   I+ G L +    D    +F  + +  + PD +++ I
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILG-LCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K G+++  + +  R+L S  TP+AVT+  +I G+C    + EA  LF   R   
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P  FT+N LI+  C+ G    A  L + M + +G       P+ VTY+T+I GLC   
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD-DGHV-----PDVVTYSTLISGLCSIA 304

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A+ L   M      P VVT  ++I G C A    EA+ +   M+  G  PDVVT++
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C+ G+ ++A  LL  M+ RG+ PN  TY  L+ G C  +++  A  +F  M+S+
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL----------- 436
           GC  ++ +Y  LI  +C    V+  L L+ EM+  GI P  V Y TL             
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484

Query: 437 --------------------------GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
                                     GL E  ++E AL    +M R           + +
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 544

Query: 471 DGLCKSGFVLEALELFRAIRDSKY 494
            GLCKSG   EA  +   I D  Y
Sbjct: 545 AGLCKSGQGGEARAVLEEIMDLAY 568



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 131/230 (56%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M + N++PD  +Y  +I G   A   N+A+ LF +++  GV P  V ++ ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            D A  L   M  RG  P+  TYN +ID  C    ++ A  L   M  +G + DVV+YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++  CK+  VEEAL L++EM   G  P   ++NT+ LGL +  ++++A ++F EM    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  D+++Y   IDGL K+G + EA +LF+ + DS    + V+YN +I G+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 153/453 (33%), Positives = 246/453 (54%), Gaps = 33/453 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL +F +M+   P P  +  F  L   +AK K +D V++L   L   G+  D+YT ++
Sbjct: 54  NEALDLFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+NCFC+  +       LG++++  F P+ VTFTSLI G C  +R+ EA ++  +     
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
            +PDV  Y T+I+ LC+ GH   AL+LF++M N      VV                   
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KP+ +T+N +ID   KEG    A+EL+ +M   +I P++ TYTS+I GF
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C     +EA+++F  M  +G  PDVV ++ +++  CK  K+D A ++   M  +G+  NT
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY TLI G+    K + A+++F  M S G   ++ +YN L++  C N  V++AL ++ +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 419 MLSK---GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           M  +   G+ P + TYN L  GL    ++E+AL +F++MR+  +     TY   I G+CK
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G V  A+ LF ++     + N+V+Y  +I GL
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 198/375 (52%), Gaps = 10/375 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ + + M+ M   P  V  +  +   L KN H +  LSLF ++ + G+ PD+  ++ L
Sbjct: 160 EAMSMVNQMVEMGIKPD-VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N  C  GR      +L  + +    P+ +TF +LI     E + ++A  L+ +    + 
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++FTY +LING C  G    A  +F  M          C P+ V Y ++I+G CK   
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKK 332

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A ++F +M  + +  + +TYT++I+GF      N A+ +F  M+ +GV P++ T++V
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392

Query: 329 IMDELCKNGKMDKASRLLELMIWR---GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++  LC NGK+ KA  + E M  R   GV PN +TYN L+ G C   K++ A  +F  M 
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                  +++Y  +I   CK   V+ A++L+  + SKG+KP VVTY T+  GLF      
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512

Query: 446 RALKLFDEMRRNHVA 460
            A  LF +M+ + V+
Sbjct: 513 EAHVLFRKMKEDGVS 527



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 115/218 (52%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  ++R   ++  +NEA  LF  M++    P ++ F+ +++ + K  K D    L + + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             GV+ + YT N L++ +C + +   A      M   G   D+V++ +LIN +C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA+S+ ++M+  GIKP VV Y T+   L +   V  AL LFD+M    +  D   Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +GLC SG   +A  L R +   K + +++++N LID  
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 3/173 (1%)

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           +GK    SRLL+L  W     N   Y  ++     + + + A  LF  M  +  +  ++ 
Sbjct: 18  SGKALSFSRLLDLSFWVRAFCN---YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +  L+N   K K  +  ++L   +   G+   + T N L     +  Q   A     +M 
Sbjct: 75  FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +     D  T+ + I+G C    + EA+ +   + +   + ++V Y  +ID L
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/414 (33%), Positives = 223/414 (53%), Gaps = 9/414 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR     P V ++  L    A+ K  +  + L + +   G  P++ T+++L++  CK+  
Sbjct: 48  LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     V+ +++   F PN +TF SL+ G C    + +A  L          P+V TY+ 
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 167

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+GLC++   + A  + EEM       GV   P+  TY+ +I GLCK   +++A+++  
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKAS----GVT--PDAFTYSALIHGLCKADKIEEAEQMLR 221

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M      PDVV Y+S+I  FC +    EA++   EM  Q   PDVVT++ ++D LCK G
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281

Query: 338 KMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           K+ +A  +L+ M   G V P+  TY+T+I+G C +D +  A+KL   M   GC  DVV+Y
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            T+I+  CK   +EEA  L   M   G  P VVTY TL  GL +  +V+ A ++ +EMR 
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL--NIVSYNCLIDGL 508
                +  TYN  ++GLC SG + EA +L + ++D + E   +  +Y  +++ L
Sbjct: 402 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/405 (33%), Positives = 218/405 (53%), Gaps = 10/405 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ + + M R    PP + ++N+L   L K         + K++   G  P++ T + 
Sbjct: 74  EEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G V     +LG ++     PN VT+++LI GLC   + +EA  +  + +   
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD FTY+ LI+GLC+      A  +   MA G+G     C P+ V Y++II   CK G
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSG-----CTPDVVVYSSIIHAFCKSG 246

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG-VQPDVVTF 326
            + +A++   +M+ +  +PDVVTY +VI G C      EA+ +  +M + G V PDVVT+
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S +++ LCK+  + +A +LL+ M   G NP+  TY T+IDG C   +++ A  L   M+ 
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  +VV+Y TLI+  CK + V+EA  +  EM + G  P +VTYNT+  GL    +++ 
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426

Query: 447 ALKLFDEMR--RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           A +L   M+  R   + D  TY   ++ L  S  V EA +L   +
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/423 (33%), Positives = 214/423 (50%), Gaps = 35/423 (8%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           C A + H    L L + + SAG  PD +TH+ +I      G +      L  +   C  P
Sbjct: 1   CNAGDLH--AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM--GC-DP 55

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N VT+T+LI       ++ EA  L  + R   C P++ TYN L++ LC+      A ++ 
Sbjct: 56  NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115

Query: 236 EEMANGNGEFGVV---------CK--------------------PNTVTYNTIIDGLCKE 266
           ++M  G     V+         CK                    PN VTY+ +IDGLCK 
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
               +AKE+  +MK   + PD  TY+++I G C A+   EA+++   M   G  PDVV +
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S I+   CK+GK+ +A + L+ M  +  +P+  TYNT+IDG C   KI  A+ +   M+ 
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295

Query: 387 NG-CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           +G  + DVV+Y+T+IN  CK+  + EA  L   M   G  P VVTY T+  GL +  ++E
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A  L   M+R   A +  TY   I GLCK+  V EA  +   +R++    N+V+YN ++
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 415

Query: 506 DGL 508
           +GL
Sbjct: 416 NGL 418


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 223/421 (52%), Gaps = 9/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N+A  +F  +L    +P  V+  +++ G C+A +  +D    LF  +N  G  P   T++
Sbjct: 27  NDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYN 84

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++I+  CK G +     ++ +++     P+ VT+ +++ GLC   R+ EA  LF +    
Sbjct: 85  VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P+  ++NT+I GLC+      A  +F EM   +        P++ +Y  +IDGL K 
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD------IPPDSWSYGILIDGLAKA 198

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A +LF +M D  I P  VTY  VI G C A   +EA  LF  M  +G +P   TF
Sbjct: 199 GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D  CK GKMD+A RLL+ M   G  P+  TY+TLI G C   ++D AR L   M  
Sbjct: 259 NILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C   VV+ NTLI+  CK   ++EA  +   M+S G  P VVTYNTL  G     Q ER
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 378

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +L  +M    +A +  TY   + GLCK+  + EA  +F  ++ S    N+ +Y  LI 
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438

Query: 507 G 507
           G
Sbjct: 439 G 439



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 208/375 (55%), Gaps = 6/375 (1%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +N   + PD +++ ILI+   K G+++    +  ++L S  TP+ V +TSLI GLC  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
             +A  LF       C P   TYN +I+  C+ G    A +L ++M     E G V  P+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI----EDGHV--PD 114

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYNT++DGLCK G V++A  LF +M+     P+  ++ ++I G C  +  ++A ++F 
Sbjct: 115 VVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM  + + PD  ++ +++D L K GK+++A +L   M+  G+ P+  TYN +I G CL  
Sbjct: 175 EMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D A +LF SM S GC     ++N LI+ +CK   ++EA  L   M   G  P VVTY+
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  GL  I +V+ A  L ++M +        T N  I GLCK+G + EA E+  A+  S
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354

Query: 493 KYELNIVSYNCLIDG 507
               ++V+YN L+ G
Sbjct: 355 GQSPDVVTYNTLVHG 369



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 213/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+ IL   LAK    +    LF++L  +G+ P    ++ LI+  C          +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    P+ VT+  +I   C    + EA  L  K       PDV TYNT+++GLC+
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    AL LF EM        + C PN  ++NTII GLC++  +D+A ++F +M+  +I
Sbjct: 128 SGRVEEALLLFNEMER------LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y  +I G   A   NEA +LF  M+D G+ P  VT++V++  +C    +D+A  
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G  P+ +T+N LID +C   K+D A +L   M  +G + DVV+Y+TLI+  C
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               V++A  L  +M+ +  KPTVVT NTL  GL +  +++ A ++ D M  +  + D  
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  + G C++G    A EL   +       N+V+Y  L+ GL
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 216/434 (49%), Gaps = 30/434 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M R    P PV+ +N++     K    +    L K++   G  PD+ T++ 
Sbjct: 62  DDARELFADMNRRGCPPSPVT-YNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK GRV    ++   + R   TPN  +  ++I GLC +S+I +A  +F +     
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
             PD ++Y  LI+GL + G    A  LF  M +       V                   
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                     C+P+  T+N +ID  CK G +D+A  L  +M D+   PDVVTY+++I G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C     ++A+ L  +M+ +  +P VVT + ++  LCK G++ +A  +L+ M+  G +P+ 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTL+ G+C   + + AR+L   M + G   +VV+Y  L++  CK   + EA  ++++
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M S G  P + TY  L LG     QV+  LKLF EM    ++ D   Y      LCKSG 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 479 VLEALELFRAIRDS 492
              ALE+ R  R+S
Sbjct: 481 SARALEILREGRES 494



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 210/444 (47%), Gaps = 44/444 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL +F+ M R+  +P   S   I+ G L +    D    +F  + +  + PD +++ I
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILG-LCQQSKIDQACQVFHEMEARDIPPDSWSYGI 190

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K G+++  + +  R+L S  TP+AVT+  +I G+C    + EA  LF   R   
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P  FT+N LI+  C+ G    A  L + M + +G       P+ VTY+T+I GLC   
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD-DGHV-----PDVVTYSTLISGLCSIA 304

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A+ L   M      P VVT  ++I G C A    EA+ +   M+  G  PDVVT++
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C+ G+ ++A  LL  M+ RG+ PN  TY  L+ G C  +++  A  +F  M+S+
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  ++ +Y  LI  +C    V+  L L+ EM+  GI P  V Y TL   L +  +  RA
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484

Query: 448 LKLFDEMR---RNHVAADT---YTYNNFID------------------------------ 471
           L++  E R   R+    D    +  +  +D                              
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLV 544

Query: 472 -GLCKSGFVLEALELFRAIRDSKY 494
            GLCKSG   EA  +   I D  Y
Sbjct: 545 AGLCKSGQGGEARAVLEEIMDLAY 568



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 131/230 (56%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M + N++PD  +Y  +I G   A   N+A+ LF +++  GV P  V ++ ++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            D A  L   M  RG  P+  TYN +ID  C    ++ A  L   M  +G + DVV+YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++  CK+  VEEAL L++EM   G  P   ++NT+ LGL +  ++++A ++F EM    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  D+++Y   IDGL K+G + EA +LFR + DS    + V+YN +I G+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/420 (33%), Positives = 219/420 (52%), Gaps = 9/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD ML    SP  V +++IL     K   Y   ++L   + + G  PDI T+++L
Sbjct: 269 DALAVFDDMLHRGCSPS-VVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C  G V     +L  +      P+AVT+T ++K LC   R  E   L  +     C
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+NT++  LC+ G    A+ + + M+    E G  C  + VTY++I+DGLC  G 
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMS----EHG--CVADIVTYSSILDGLCDVGR 441

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A EL  ++K     PD + YT+V++G C    W  A+ L  EM+     PD VTF+ 
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+ G +D+A R++E M   G +P+  TYN +IDG C    ID A +L   ++S G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+V++NTL+   C     E+A  L + M+     P  +T+NT+   L +   + +A+
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    M  N    ++ TY+  +D L K+G    ALEL   + +   +L  ++YN +I  L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDL--ITYNTVISNL 679



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 242/493 (49%), Gaps = 24/493 (4%)

Query: 19  ALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSG 78
           ALR   SSS  HT  P S I    P        +    R   +      +  K R +S  
Sbjct: 105 ALRAASSSSL-HTPNPRSKIQRATPEQ--QDQHVDTKWRRQPRAPPRRGEGAKRRLRSLV 161

Query: 79  Q-GDINLITPNEALCIFDYMLRMHP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           Q G+I+     EAL +FD M      + PPV   NIL   L  +        +F  L  +
Sbjct: 162 QRGEID-----EALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
                + T++ ++N +C+ GR+     ++  +    F P+  TF  LI+ LC   RI +A
Sbjct: 217 AT---VVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVT 255
            A+F       C P V TY+ L++  C+      A+ L +EM A G       C+P+ VT
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG-------CEPDIVT 323

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I+ +C EG VD+A  +   +      PD VTYT V++  C +  W E + L  EM 
Sbjct: 324 YNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMT 383

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                PD VTF+ I+  LC+ G +D+A  +++ M   G   +  TY++++DG C   ++D
Sbjct: 384 SNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVD 443

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +L   ++S GC  D ++Y T++   C  +  E A  L +EML     P  VT+NT+ 
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVV 503

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L +   V+RA+++ ++M  N  + D  TYN  IDGLC    + +A+EL   ++    +
Sbjct: 504 ASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCK 563

Query: 496 LNIVSYNCLIDGL 508
            +IV++N L+ GL
Sbjct: 564 PDIVTFNTLLKGL 576



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 209/404 (51%), Gaps = 8/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN +   L +    D  + +   ++  G   DI T+S +++  C +GRV     +
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVEL 448

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+      P+ + +T+++KGLC+  +   A  L  +     C PD  T+NT++  LC+
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ + E+M+  NG     C P+ VTYN IIDGLC E  +D A EL   ++    
Sbjct: 509 KGLVDRAIRVVEQMSE-NG-----CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGC 562

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VT+ ++++G C  + W +A++L   MM     PD +TF+ ++  LC+ G + +A  
Sbjct: 563 KPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIE 622

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L++M   G  PN+ TY+ ++D      K   A +L   M +NG   D+++YNT+I+   
Sbjct: 623 TLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM-TNG-TPDLITYNTVISNLT 680

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEAL L   M+S G+ P   TY +L  G+      +RA+++   ++   ++ DT 
Sbjct: 681 KAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTT 740

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN+ + G C+      A++ F  +  S    +  +Y  L++ L
Sbjct: 741 FYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 169/354 (47%), Gaps = 8/354 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+ +   P   ++  +   L   + ++    L   +  +   PD  T + ++   C+ G 
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     V+ ++  +  +P+ VT+  +I GLC ES I +A  L +  +   C+PD+ T+NT
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT 571

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L+ GLC       A  L   M   N      C P+ +T+NT+I  LC++G + +A E   
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSN------CPPDELTFNTVITSLCQKGLLTQAIETLK 625

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M +    P+  TY+ V+     A     A  L   M +    PD++T++ ++  L K G
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAG 683

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           KM++A  LL +M+  G+ P+T TY +L  G C  D  D A ++   ++  G   D   YN
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            ++  +C+++  + A+  ++ M+S G  P   TY  L   L     ++ A +L 
Sbjct: 744 DVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLL 797



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 8/321 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +FN +   L +    D  + + ++++  G  PDI T++ +I+  C    +     
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      P+ VTF +L+KGLC   R  +A  L        C PD  T+NT+I  LC
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+   + MA  NG     C PN+ TY+ ++D L K G    A EL   M   N
Sbjct: 613 QKGLLTQAIETLKIMAE-NG-----CVPNSSTYSIVVDALLKAGKAQAALELLSGMT--N 664

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD++TY +VI     A    EA  L   M+  G+ PD  T+  +   +C+    D+A 
Sbjct: 665 GTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R+L  +   G++P+T  YN ++ G+C   + D A   F  M S+GCM D  +Y  L+   
Sbjct: 725 RMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784

Query: 404 CKNKDVEEALSLYSEMLSKGI 424
                ++EA  L + + S G+
Sbjct: 785 AYGGLLDEAKRLLASLCSLGV 805



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 8/286 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L      D  + L   L S G  PDI T + L+   C + R      +
Sbjct: 529 PDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQL 588

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++RS   P+ +TF ++I  LC +  + +A           C P+  TY+ +++ L +
Sbjct: 589 MANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLK 648

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL L   M NG         P+ +TYNT+I  L K G +++A +L   M    +
Sbjct: 649 AGKAQAALELLSGMTNGT--------PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY S+  G C  +  + A R+   + D G+ PD   ++ ++   C++ + D A  
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
               M+  G  P+  TY  L++       +D A++L  S+ S G +
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 56/143 (39%)

Query: 84  LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           L+   +A    + +  M    P + ++N +   L K    +  L L + + S GL PD  
Sbjct: 646 LLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTT 705

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+  L    C+         +L R+  +  +P+   +  ++ G C + R   A   F   
Sbjct: 706 TYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHM 765

Query: 204 RVFACEPDVFTYNTLINGLCRTG 226
               C PD  TY  L+  L   G
Sbjct: 766 VSSGCMPDESTYVILLEALAYGG 788


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/415 (34%), Positives = 220/415 (53%), Gaps = 14/415 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ ML    +P   + ++++   L +    D   ++  +    G  P++  ++IL   F
Sbjct: 147 MFERMLDAGYAPDSYT-YHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR+         I R+  +P+A+ + ++I G C ++    A     +       PDV
Sbjct: 206 CKTGRLKDAL----EIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDV 261

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FTYN LI+GLC+   T  A  +  EM +     GV   P+TVT+N+I+DGLCK G  ++A
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMVDR----GVT--PDTVTFNSIMDGLCKAGKFERA 315

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L   M + N  P   TY ++I G C   + + AK L  E +  G  PDVVT+S++ D 
Sbjct: 316 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADG 375

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G++D+A  L++ M  +G  PN  TYNTLIDG C   K + A +L  S+ S+G + D
Sbjct: 376 LCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+Y  +++  CK   +++AL +   ML +G  P+V+TY  L  GL    +V+ A  +F 
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           EM      AD   Y + ++G CKS    EA ++   IR + Y   I  YN L+DG
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDG 547



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 219/437 (50%), Gaps = 39/437 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L K ++ D    L     S+G  PD+ T+SIL +  CK GR+   F +
Sbjct: 329 PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 388

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +     TPN VT+ +LI GLC  S+  +A  L          PDV TY  +++GLC+
Sbjct: 389 VKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK 448

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + E M          C P+ +TY  +++GLC+ G VD+A  +F +M  ++ 
Sbjct: 449 EGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRL--------------------------------FI 312
             D + Y S++ G+C ++   EA+++                                F 
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 562

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           +M  +G  P++ T++++MD LCK+GK+D+A   LE M   G  P+  +YN +IDG     
Sbjct: 563 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 622

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K   AR++   M   G   D V+YNTL+  +CK +  ++A+ +   M+  G+ P  VTYN
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           TL  GL + +++  A +L  EM RN  V +   TYN  ID LCK G + +AL L   +  
Sbjct: 683 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 742

Query: 492 SKYELNIVSYNCLIDGL 508
              E N V+YN  ID L
Sbjct: 743 HGVEANTVTYNIFIDRL 759



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 201/392 (51%), Gaps = 10/392 (2%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L + K   T +  F      G     +T +  +    + G       +  R+L + + P+
Sbjct: 100 LQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPD 159

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
           + T+  +IK LC  ++I +A  +  K +V   +P+V  Y  L    C+TG    AL +F 
Sbjct: 160 SYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR 219

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
            + +          P+ + YN II G C++   D A E   +M +  + PDV TY  +I 
Sbjct: 220 NIPS----------PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILID 269

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C A+  ++A  +  EM+D+GV PD VTF+ IMD LCK GK ++A  LL +M  R   P
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRP 329

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  TYNTLI G C    +D A+ L     S+G + DVV+Y+ L +  CK   ++EA  L 
Sbjct: 330 SCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 389

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            EM  KG  P +VTYNTL  GL +  + E+A +L + +  +    D  TY   +DGLCK 
Sbjct: 390 KEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKE 449

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G + +AL++   +       ++++Y  L++GL
Sbjct: 450 GRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 224/499 (44%), Gaps = 95/499 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K    +    L + L S+G  PD+ T++I+++  CK GR+     +
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 458

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +L+   TP+ +T+T+L++GLC   R+ EA  +F +     C  D   Y +L+NG C+
Sbjct: 459 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 518

Query: 225 TGHTIVA------------LNLFEEMANGNGEFGVV--------------CKPNTVTYNT 258
           +  T  A            ++++  + +G  + G +              C PN  TYN 
Sbjct: 519 SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 578

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++DGLCK G VD+A      M      PDVV+Y  +I G   A+   EA+++  +M+  G
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + PD VT++ +M + CK  + D A  +L+ MI  GV+P+  TYNTLI G   T+++  A 
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698

Query: 379 KLFVSMESNGCMHDV-VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN----- 432
           +L   M  NGC+     +YNT+I+  CK   +++AL L   M   G++   VTYN     
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758

Query: 433 ---------------------------TLFLGLFEIHQVERALKLFDEMR---------- 455
                                      T+ +GL +  Q++RA KL  EM           
Sbjct: 759 LCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818

Query: 456 --------------------------RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                                     +   +    TYN  I  LCK   V +A ELF  +
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878

Query: 490 RDSKYELNIVSYNCLIDGL 508
                  + VSY  LI GL
Sbjct: 879 AVRGIVASSVSYTVLIYGL 897



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 212/487 (43%), Gaps = 85/487 (17%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL + + ML+     P V ++  L   L +    D    +FK + S     D   +  
Sbjct: 453 DKALKMVEGMLK-RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N +CK  R      V+  I     TP    + +L+ G C E R+ E   +F       
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P++ TYN +++GLC+ G    A    E M +        C P+ V+YN IIDGL K  
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG------CVPDVVSYNIIIDGLFKAS 622

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A+++  +M    I PD VTY +++  FC    +++A  +   M+  GV PD VT++
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682

Query: 328 V------------------------------------IMDELCKNGKMDKASRLLELMIW 351
                                                I+D LCK G + +A  L++ M  
Sbjct: 683 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 742

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT------------- 398
            GV  NT TYN  ID  C   ++D A  L   M++   + D VSY T             
Sbjct: 743 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDR 799

Query: 399 -----------------------LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
                                  LI+ + K K ++EAL+L   M+ +G  P+V+TYN + 
Sbjct: 800 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVI 859

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L ++ +V++A +LFDEM    + A + +Y   I GLC  G   EAL++   +  S  E
Sbjct: 860 TCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919

Query: 496 LNIVSYN 502
           ++ + + 
Sbjct: 920 IDDLKWE 926



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 150/336 (44%), Gaps = 45/336 (13%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA  + D M++    PP   ++N L     K + +D  + + K +  AG+ PD  T++
Sbjct: 624 PKEARQVLDQMIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682

Query: 147 ILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            LI+   +  R+   + ++  +LR+ C      T+ ++I  LC E  + +A  L      
Sbjct: 683 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 742

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              E +  TYN  I+ LC+ G    A +L  EM     E         V+Y T+I GLCK
Sbjct: 743 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE---------VSYTTVIIGLCK 793

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+A +L  +M               ++G C  +                      T
Sbjct: 794 AEQLDRASKLAREM-------------VAVKGLCITSH---------------------T 819

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F++++D   K  ++D+A  LL LM+ RG +P+  TYN +I   C  DK+D A +LF  M 
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             G +   VSY  LI   C     +EAL +  EM S
Sbjct: 880 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 915



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 49/236 (20%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           MLR        +++N +   L K       L L   +   G+  +  T++I I+  CK G
Sbjct: 704 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 763

Query: 157 RVSHGFVVLGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAAL--------------- 199
           R+     +L  +  LR     + V++T++I GLC   ++  A+ L               
Sbjct: 764 RLDEASSLLSEMDTLR-----DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818

Query: 200 --------FTKHRVF-------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
                   FTK +                C P V TYN +I  LC+      A  LF+EM
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           A      G+V   ++V+Y  +I GLC +G   +A ++  +M   +   D + +  V
Sbjct: 879 A----VRGIV--ASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/477 (33%), Positives = 252/477 (52%), Gaps = 22/477 (4%)

Query: 25  SSSFPHTRKPTSSISENEPSY--PTTTSKLKESLRLTVKDRA-SLKKFLKERCKSSGQGD 81
           S+SF     P  ++S   PS    T+++     + L   DR  S +  L    ++   G+
Sbjct: 9   SASFKPNLSPLCTLSSPIPSSVPQTSSTNHPNPILLAFNDRGISFQHRLSSFLRNCKTGN 68

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           I++I   +A   FD M+R HP PP +SSFN L G LAK  HY  + SL+ ++  AGL PD
Sbjct: 69  IDVI---QAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPD 124

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL---CAESRIMEAAA 198
           ++T +IL NC C + RVS G   +  ILR  + P+ VT+ +LIKGL   C      EA  
Sbjct: 125 LFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKE 184

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +F + +     P+V +Y++L++G C  G    +  LF EM +     GV  +PN V +N 
Sbjct: 185 IFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ----GV--QPNLVQFNV 238

Query: 259 IIDGLCKEGFV---DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +ID LCKEG +     A++LFL M  +    + ++YT +I G+C      EA  L+ EM 
Sbjct: 239 LIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP 298

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G +P+V T+S ++  L + GK+  A++L  +M   G++ ++  Y   +DG C    + 
Sbjct: 299 QVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLF 358

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +LF  ++S     D  SY+ LI+  CK   VE A   + ++  +G++P VVT N + 
Sbjct: 359 EAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMI 418

Query: 436 LGLFEIHQVERALKLFDEMRR---NHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            G   + QV++A  LF++M +   N    D  TYN  + G C+S  + E + L   +
Sbjct: 419 HGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 187/364 (51%), Gaps = 49/364 (13%)

Query: 153 CKMGRVS--HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
           CK G +     F     ++RS   P   +F  L+ GL   +   +  +L+ K R+    P
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D+FT N L N LC        L                           + G+ + G++ 
Sbjct: 124 DLFTLNILANCLCNLNRVSEGL-------------------------AAMTGILRRGYI- 157

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGF---CYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
                          PD+VTY ++I+G    C     +EAK +F EM  QG+ P+V+++S
Sbjct: 158 ---------------PDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYS 202

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI---DHARKLFVSM 384
            ++   C  GK++++ RL   M+ +GV PN   +N LID  C   KI     ARKLF+SM
Sbjct: 203 SLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSM 262

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S GC H+ +SY  LIN YCK   VEEA++LY+EM   G +P V TY+TL  GL +  +V
Sbjct: 263 PSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKV 322

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A KLF  M+ + ++ D+  Y  F+DGLCK+G + EA+ELF  ++   ++L+  SY+ L
Sbjct: 323 GDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRL 382

Query: 505 IDGL 508
           IDGL
Sbjct: 383 IDGL 386



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 14/348 (4%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGC--LAKNKHYDTVLSLFKRLNSAGLFP 140
           NL   +E L     +LR    P  V+   ++ G   L K  H D    +F+ + + G+ P
Sbjct: 137 NLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIP 196

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME---AA 197
           ++ ++S L++ FC  G++     +   ++     PN V F  LI  LC E +I +   A 
Sbjct: 197 NVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSAR 256

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            LF       CE +  +Y  LING C+      A+NL+ EM        V  +PN  TY+
Sbjct: 257 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ------VGKRPNVKTYS 310

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T++ GL + G V  A +LF  MK   I+ D   Y   + G C      EA  LF E+   
Sbjct: 311 TLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSY 370

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
             + D  ++S ++D LCK GK++ A    + +   G+ PN  T N +I G+C  +++D A
Sbjct: 371 NFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA 430

Query: 378 RKLFVSME---SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
             LF  ME    NGC  D+++YNTL+  +C++  +EE ++L  +M  +
Sbjct: 431 NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 4/140 (2%)

Query: 371 TDKIDHARKLFVSMESNGC--MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           T   +H   + ++    G    H + S+  L N    N DV +A   +  M+     P +
Sbjct: 33  TSSTNHPNPILLAFNDRGISFQHRLSSF--LRNCKTGNIDVIQAFHFFDLMMRSHPIPPI 90

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            ++N L  GL +I+   +   L+++MR   ++ D +T N   + LC    V E L     
Sbjct: 91  SSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTG 150

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I    Y  +IV+YN LI GL
Sbjct: 151 ILRRGYIPDIVTYNTLIKGL 170


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 216/384 (56%), Gaps = 6/384 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N++   L K   +DT+  ++  + + G  P++ T+  LI+  C+ G     F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P  V +T LI+GLC ESRI EA ++F   R     P+++TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL L++EM  G+G       PN VT+  +IDGLCK   +  A++  + M    +
Sbjct: 276 IAHVKKALELYQEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++  Y  +I G+C A + +EA  L  E+    + PDV T+S+++  LC   +M++A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  +G  PN  TYNTLIDGYC    ++ A ++   M   G   ++++++TLI+ YC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +E A+ LY+EM+ KG+ P VV Y  L  G F+    + A +L  EM+   +  + +
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 465 TYNNFIDGLCKSGFVLEALELFRA 488
           T +  IDGLCK G + +A++LF A
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 221/416 (53%), Gaps = 9/416 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ + R+  S    + F +L    ++    +  L ++ +++   + P +   +++++  
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGL 168

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K GR    + V G ++    +PN VT+ +LI G C +   ++A  LF +       P V
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y  LI GLC       A ++F  M N     G++  PN  TYNT++DG CK   V KA
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNS----GML--PNLYTYNTMMDGYCKIAHVKKA 282

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL+ +M  + + P+VVT+  +I G C  ++   A++  I+M   GV P++  ++ ++D 
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G + +A  L   +    + P+ +TY+ LI G C  D+++ A  L   M+  G + +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V+YNTLI+ YCK  ++E+A+ + S+M  KGI+P ++T++TL  G  +  ++E A+ L+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM    +  D   Y   IDG  K G   EA  L + ++++    N+ + +CLIDGL
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/384 (20%), Positives = 150/384 (39%), Gaps = 49/384 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F+ L     K    +  + L+  +   GL PD+  ++ LI+   K G     F +
Sbjct: 436 PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL 495

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +   PN  T + LI GLC + RI +A  L      F  +    T  +  N L R
Sbjct: 496 HKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL------FLAKTGTDTTGSKTNELDR 549

Query: 225 TGHTI--VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           + + +  +AL+LF  ++        +C                   V +  +LF      
Sbjct: 550 SLYQMCSLALSLFRGISEP-----CIC-------------------VIRVTKLFAT---- 581

Query: 283 NINPDVVTYTSVIRGFC------YANDWNEAK-RLFIEMMDQGVQPDVVTFSVI--MDEL 333
           N  P    +T +           Y    N +K  LF  ++ +     + +FS++  +   
Sbjct: 582 NNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKAC 641

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
                + +  ++  L+I  G  P  +   +LI  Y  T  +  A  +F  + S     ++
Sbjct: 642 TLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NL 697

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           +S+ ++I+ Y  N+   +AL L+ +M    ++P +VT         ++  ++    +   
Sbjct: 698 ISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAY 757

Query: 454 MRRNHVAADTYTYNNFIDGLCKSG 477
           +R   +  D    N+ I+   K G
Sbjct: 758 IRHRGLDTDLCLNNSLINMYSKCG 781



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/265 (20%), Positives = 119/265 (44%), Gaps = 23/265 (8%)

Query: 175 PNAVTFTSLIKGLCA---ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
           P+++   SL+  L A   +S ++E   +      F  EP +F   +LI+    TG+   A
Sbjct: 626 PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADA 685

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            N+F+E+ +           N +++ ++I         +KA +LF +M+ +++ PD+VT 
Sbjct: 686 HNMFDEIPS----------KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTV 735

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T  +         +  + +   +  +G+  D+   + +++   K G++  A R      +
Sbjct: 736 TVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARR------F 789

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS-YNTLINWYCKNKDVE 410
             V PN  T+  ++        ++  ++ F SM+ +  +   +S +  +++  C+   + 
Sbjct: 790 SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLT 849

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLF 435
           EA   Y  +L   ++P  V + TL 
Sbjct: 850 EA---YEFILKMPVRPNAVVWRTLL 871


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 215/373 (57%), Gaps = 6/373 (1%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           +G  P++ T S L+   C  G+V     +  ++ RS F  + + +  LI  L    +   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L  +     C  + FTY  +I+ LC+ G  I  L +F EM N       +C PN + 
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-----IC-PNVIV 116

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+++I+GLC+ G + +A  LF +M  + I  +V+TY S+I   C    W EA R F +M+
Sbjct: 117 YSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+ PDVVTF+ ++D L K GK+ +A ++ ELMI +G  PN  TYN+L++G CL  ++D
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           HA +LF  M   G   DV+SYNTLIN YC +   EEA++L+ +M  + + P++ TY  L 
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L++  ++  A +LF+ M+    +    TY   +DGLCK+G + EA+++FR+++  KY+
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356

Query: 496 LNIVSYNCLIDGL 508
            +I  Y+ LI G+
Sbjct: 357 PSIRIYSILIGGM 369



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 220/440 (50%), Gaps = 42/440 (9%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
            P  V+   ++ G   + K  D  L LF ++  +G   DI  +  LIN   K  +     
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDA-LELFDKMTRSGFQGDILLYGYLINALRKTRQARRAV 64

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +  R+L    + N  T+  +I  LC +   ++   +F +       P+V  Y++LINGL
Sbjct: 65  ELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A+NLF+EM +         K N +TYN++I   C+ G   +A   F +M  E
Sbjct: 125 CRVGKLREAVNLFDEMVSQG------IKANVITYNSLIHASCRFGLWKEATRTFSQMVGE 178

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I PDVVT+T++I          EA ++F  M+ QG  P++VT++ +++ LC + +MD A
Sbjct: 179 GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHA 238

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME----------------- 385
            RL E+M+ RG+  +  +YNTLI+GYC + K + A  LF  M+                 
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298

Query: 386 --SNGCMH----------------DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
              NG +                  + +Y  L++  CKN  +EEA+ ++  + S   KP+
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPS 358

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +  Y+ L  G+F+  + E A+++FDE+    +  +  TYN  I+GLCK G +LEA  LF 
Sbjct: 359 IRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFV 418

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + +S  E + +S+N +I G
Sbjct: 419 QMEESGCEQDEISFNFIIRG 438



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 15/312 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  IF+ M++     P + ++N L   L  +   D  + LF+ +   G+  D+ +++ 
Sbjct: 201 QEAYKIFELMIK-QGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +C  G+      +  ++     TP+  T+T L+K L    RI  A  LF   ++  
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + TY  L++GLC+ G    A+++F  + +      +  KP+   Y+ +I G+ +  
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS------IKYKPSIRIYSILIGGMFQAR 373

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A E+F ++    + P++VTY  +I G C      EA+RLF++M + G + D ++F+
Sbjct: 374 RWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFN 433

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+    +  ++ KA   L+ M  +  +PN      L++ Y        A     S   N
Sbjct: 434 FIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLY--------AADAQSSELPN 485

Query: 388 GCMHDVVSYNTL 399
             +H++V   TL
Sbjct: 486 NFLHELVQKKTL 497



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%)

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           M  G QP++VT S ++  +C  GK+  A  L + M   G   +   Y  LI+    T + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A +L   M S  C  +  +Y  +I+  CK+    + L ++ EM++ GI P V+ Y++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL  + ++  A+ LFDEM    + A+  TYN+ I   C+ G   EA   F  +     
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 495 ELNIVSYNCLIDGL 508
             ++V++  LID L
Sbjct: 181 LPDVVTFTTLIDHL 194


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 258/485 (53%), Gaps = 22/485 (4%)

Query: 23  NFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDI 82
           +FSSS     + T++    + + PT   + + S  L  +D   LK F +  C+S      
Sbjct: 51  SFSSSGARNLQATTT----DAAIPTERRQ-QHSQSLGFRDTQMLKIFHRS-CRSG----- 99

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N I   E+L + + M+R   +P  +    ++ G     ++    + + + L   G  PD+
Sbjct: 100 NYI---ESLHLLETMVRKGYNPDVILCTKLIKGFFTL-RNVPKAVRVMEILEKFGQ-PDV 154

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           + ++ LIN FCKM R+     VL R+    F+P+ VT+  +I  LC+  ++  A  +  +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                C+P V TY  LI      G    AL L +EM +         KP+  TYNTII G
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG------LKPDMFTYNTIIRG 268

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           +CKEG VD+A E+   ++ +   PDV++Y  ++R       W E ++L  +M  +   P+
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           VVT+S+++  LC++GK+++A  LL+LM  +G+ P+ Y+Y+ LI  +C   ++D A +   
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           +M S+GC+ D+V+YNT++   CKN   ++AL ++ ++   G  P   +YNT+F  L+   
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
              RAL +  EM  N +  D  TYN+ I  LC+ G V +A EL   +R  ++  ++V+YN
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508

Query: 503 CLIDG 507
            ++ G
Sbjct: 509 IVLLG 513



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 200/399 (50%), Gaps = 9/399 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  + D M     SP  V+ +NI+ G L      D  L +  +L S    P + T++I
Sbjct: 171 DDATRVLDRMRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTI 229

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI      G V     +L  +L     P+  T+ ++I+G+C E  +  A  +     +  
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG 289

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CEPDV +YN L+  L   G       L  +M      F   C PN VTY+ +I  LC++G
Sbjct: 290 CEPDVISYNILLRALLNQGKWEEGEKLMTKM------FSEKCDPNVVTYSILITTLCRDG 343

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  L   MK++ + PD  +Y  +I  FC     + A      M+  G  PD+V ++
Sbjct: 344 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 403

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG-YCLTDKIDHARKLFVSMES 386
            ++  LCKNGK D+A  +   +   G +PN+ +YNT+    +   DKI  A  + + M S
Sbjct: 404 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI-RALHMILEMVS 462

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NG   D ++YN++I+  C+   V++A  L  +M S    P+VVTYN + LG  + H++E 
Sbjct: 463 NGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 522

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           A+ + D M  N    +  TY   I+G+  +G+  EA+EL
Sbjct: 523 AIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 197/404 (48%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    D    +  R+ S    PD  T++I+I   C  G++     V
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     P  +T+T LI+    E  + EA  L  +      +PD+FTYNT+I G+C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +   +          C+P+ ++YN ++  L  +G  ++ ++L  KM  E  
Sbjct: 272 EGMVDRAFEMIRNLELKG------CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+VVTY+ +I   C      EA  L   M ++G+ PD  ++  ++   C+ G++D A  
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            LE MI  G  P+   YNT++   C   K D A ++F  +   GC  +  SYNT+ +   
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            + D   AL +  EM+S GI P  +TYN++   L     V++A +L  +MR         
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  + G CK+  + +A+++  ++  +    N  +Y  LI+G+
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 3/157 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL IF  +  +  SP   SS+N +F  L  +      L +   + S G+ PD  T++ 
Sbjct: 416 DQALEIFGKLGEVGCSPNS-SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474

Query: 148 LINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +I+C C+ G V   F +L   +RSC F P+ VT+  ++ G C   RI +A  +       
Sbjct: 475 MISCLCREGMVDKAFELLVD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
            C P+  TY  LI G+   G+   A+ L  ++   N 
Sbjct: 534 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINA 570


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 216/384 (56%), Gaps = 6/384 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N++   L K   +DT+  ++  + + G  P++ T+  LI+  C+ G     F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P  V +T LI+GLC ESRI EA ++F   R     P+++TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL L++EM  G+G       PN VT+  +IDGLCK   +  A++  + M    +
Sbjct: 276 IAHVKKALELYQEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++  Y  +I G+C A + +EA  L  E+    + PDV T+S+++  LC   +M++A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  +G  PN  TYNTLIDGYC    ++ A ++   M   G   ++++++TLI+ YC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +E A+ LY+EM+ KG+ P VV Y  L  G F+    + A +L  EM+   +  + +
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 465 TYNNFIDGLCKSGFVLEALELFRA 488
           T +  IDGLCK G + +A++LF A
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 221/416 (53%), Gaps = 9/416 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ + R+  S    + F +L    ++    +  L ++ +++   + P +   +++++  
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGL 168

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K GR    + V G ++    +PN VT+ +LI G C +   ++A  LF +       P V
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y  LI GLC       A ++F  M N     G++  PN  TYNT++DG CK   V KA
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNS----GML--PNLYTYNTMMDGYCKIAHVKKA 282

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL+ +M  + + P+VVT+  +I G C  ++   A++  I+M   GV P++  ++ ++D 
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G + +A  L   +    + P+ +TY+ LI G C  D+++ A  L   M+  G + +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V+YNTLI+ YCK  ++E+A+ + S+M  KGI+P ++T++TL  G  +  ++E A+ L+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM    +  D   Y   IDG  K G   EA  L + ++++    N+ + +CLIDGL
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 211/438 (48%), Gaps = 43/438 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD M+      P V  + IL   L          S+F+ + ++G+ P++YT++ +
Sbjct: 211 KAFRLFDEMIE-KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +CK+  V     +   +L     PN VTF  LI GLC    ++ A         F  
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEE-------------------------MANGNG 243
            P++F YN LI+G C+ G+   AL+L  E                         M   +G
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 244 EFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
               + K    PN VTYNT+IDG CKEG ++KA E+  +M ++ I P+++T++++I G+C
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A     A  L+ EM+ +G+ PDVV ++ ++D   K+G   +A RL + M   G++PN +
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 360 TYNTLIDGYCLTDKIDHARKLFVS-------------MESNGCMHDVVSYNTLINWYCKN 406
           T + LIDG C   +I  A KLF++             ++ + C  + V Y  LI   C +
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +A   +S+M   G++P V T   +  G F    +   + L  ++ +  +  ++  Y
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629

Query: 467 NNFIDGLCKSGFVLEALE 484
                G  +SG++  AL 
Sbjct: 630 RVLAKGYEESGYLKSALR 647



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 181/365 (49%), Gaps = 23/365 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F IL   L K     +       + S G+ P+I+ ++ LI+ +CK G +S    +
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              I +    P+  T++ LIKGLC   R+ EA  L  + +     P+  TYNTLI+G C+
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+ +  +M     E G+  +PN +T++T+IDG CK G ++ A  L+ +M  + +
Sbjct: 416 EGNMEKAIEVCSQMT----EKGI--EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVV YT++I G     +  EA RL  EM + G+ P+V T S ++D LCK+G++  A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 345 LLELMIWRGVN---------------PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           L   +   G +               PN   Y  LI G C   +I  A K F  M  +G 
Sbjct: 530 LF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DV +   +I  + +   + + + L +++L  GI P    Y  L  G  E   ++ AL+
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647

Query: 450 LFDEM 454
             +++
Sbjct: 648 CSEDL 652


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 209/368 (56%), Gaps = 6/368 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ LIN FCKM R+     VL R+    F+P+ VT+  +I  LC+  ++  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C+P V TY  LI      G    AL L +EM +         KP+  TYNTI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I G+CKEG VD+A E+   ++ +   PDV++Y  ++R       W E ++L  +M  +  
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+VVT+S+++  LC++GK+++A  LL+LM  +G+ P+ Y+Y+ LI  +C   ++D A +
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
              +M S+GC+ D+V+YNT++   CKN   ++AL ++ ++   G  P   +YNT+F  L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                 RAL +  EM  N +  D  TYN+ I  LC+ G V EA EL   +R  ++  ++V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509

Query: 500 SYNCLIDG 507
           +YN ++ G
Sbjct: 510 TYNIVLLG 517



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 200/399 (50%), Gaps = 9/399 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  + D M     SP  V+ +NI+ G L      D  L +  +L S    P + T++I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI      G V     ++  +L     P+  T+ ++I+G+C E  +  A  +     +  
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CEPDV +YN L+  L   G       L  +M      F   C PN VTY+ +I  LC++G
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKM------FSEKCDPNVVTYSILITTLCRDG 347

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  L   MK++ + PD  +Y  +I  FC     + A      M+  G  PD+V ++
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG-YCLTDKIDHARKLFVSMES 386
            ++  LCKNGK D+A  +   +   G +PN+ +YNT+    +   DKI  A  + + M S
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI-RALHMILEMMS 466

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NG   D ++YN++I+  C+   V+EA  L  +M S    P+VVTYN + LG  + H++E 
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           A+ + + M  N    +  TY   I+G+  +G+  EA+EL
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    D    +  R+ S    PD  T++I+I   C  G++     V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     P  +T+T LI+    E  + EA  L  +      +PD+FTYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +   +          C+P+ ++YN ++  L  +G  ++ ++L  KM  E  
Sbjct: 276 EGMVDRAFEMVRNLELKG------CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+VVTY+ +I   C      EA  L   M ++G+ PD  ++  ++   C+ G++D A  
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            LE MI  G  P+   YNT++   C   K D A ++F  +   GC  +  SYNT+ +   
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            + D   AL +  EM+S GI P  +TYN++   L     V+ A +L  +MR         
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  + G CK+  + +A+ +  ++  +    N  +Y  LI+G+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 209/368 (56%), Gaps = 6/368 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ LIN FCKM R+     VL R+    F+P+ VT+  +I  LC+  ++  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C+P V TY  LI      G    AL L +EM +         KP+  TYNTI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I G+CKEG VD+A E+   ++ +   PDV++Y  ++R       W E ++L  +M  +  
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+VVT+S+++  LC++GK+++A  LL+LM  +G+ P+ Y+Y+ LI  +C   ++D A +
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
              +M S+GC+ D+V+YNT++   CKN   ++AL ++ ++   G  P   +YNT+F  L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                 RAL +  EM  N +  D  TYN+ I  LC+ G V EA EL   +R  ++  ++V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509

Query: 500 SYNCLIDG 507
           +YN ++ G
Sbjct: 510 TYNIVLLG 517



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 197/411 (47%), Gaps = 31/411 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    D    +  R+ S    PD  T++I+I   C  G++     V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     P  +T+T LI+    E  + EA  L  +      +PD+FTYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 225 TGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTVT 255
            G    A  +   +     E  V+                             C PN VT
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+ +I  LC++G +++A  L   MK++ + PD  +Y  +I  FC     + A      M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG-YCLTDKI 374
             G  PD+V ++ ++  LCKNGK D+A  +   +   G +PN+ +YNT+    +   DKI
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  + + M SNG   D ++YN++I+  C+   V+EA  L  +M S    P+VVTYN +
Sbjct: 456 -RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            LG  + H++E A+ + + M  N    +  TY   I+G+  +G+  EA+EL
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/462 (33%), Positives = 240/462 (51%), Gaps = 22/462 (4%)

Query: 59  TVKDRA-SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCL 117
            V DR   L++ +  R ++        ++ ++AL +FD  L  H  P  + +FN L   +
Sbjct: 8   AVSDRCLELERIIGARARAGS------LSVDDALKLFDEFLH-HARPASIIAFNQLLAAV 60

Query: 118 AKNKHY------DTVLSLFKRLNS---AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +           + V+S F R+     + + PD++T+SIL+ CFC+MGR+ HGF   G I
Sbjct: 61  SSASRRGSSSTSELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLI 120

Query: 169 LRSCFTPNAVTFTS-LIKGLCAESRIMEA-AALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           L++ +  N V   + L+KGLC   R+ EA   L  +     C P+V +YNTL+ G C   
Sbjct: 121 LKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDEN 180

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL L   MA+G       C PN V+YNT+I+G   EG VDKA  LFL M D+ I P
Sbjct: 181 RAEEALELLHMMADGQVR---SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPP 237

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VVTYT VI G C A   + A+ +F +M+D+GV+P++VT++ ++      G+  +  R+L
Sbjct: 238 NVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRML 297

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M   G+ P+ +TY  L+D  C   K   ARKLF SM   G   DV  Y  +++ Y   
Sbjct: 298 KEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATK 357

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + E  S    M+  GI P    +N +F    +   +  A+ +F++MR+  ++ +   Y
Sbjct: 358 GALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNY 417

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              ID LCK G V +A   F  + +     NIV +  L+ GL
Sbjct: 418 ATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGL 459



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 232/435 (53%), Gaps = 31/435 (7%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++ I+   L K +  D    +F+++   G+ P+I T++ LI+ +  +G+      
Sbjct: 236 PPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVR 295

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      P+  T+  L+  LC + +  EA  LF        +PDV  Y  +++G  
Sbjct: 296 MLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYA 355

Query: 224 RTGHTIVALNLFEEMANGNGE------FGVV------------------------CKPNT 253
             G  +  ++ F ++  GNG       F +V                          PN 
Sbjct: 356 TKG-ALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNV 414

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V Y T+ID LCK G VD A+  F +M +E + P++V +TS++ G C  + W +A  LF E
Sbjct: 415 VNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFE 474

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M++QG+ P+VV F+ IM  LC  G++ KA RL++LM   G  P+  +YN LI G+CL  K
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            D A KL   M S G   +  +YNTL++ YC++  +++A S++ EMLS GI P VVTYNT
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GLF+  +   A +L+  M  +      YTYN  ++GL K+  V EAL++F+++    
Sbjct: 595 ILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKD 654

Query: 494 YELNIVSYNCLIDGL 508
            +++I+++N +I  L
Sbjct: 655 LQVDIITFNIMIGAL 669



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 204/417 (48%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M+R     P VS + I+    A       + S    +   G+ P+ Y  +I+
Sbjct: 327 EARKLFDSMIR-KGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV 385

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
              F K   +     +  ++ +   +PN V + +LI  LC   R+ +A   F +      
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++  + +L+ GLC       A  LF EM N          PN V +NTI+  LC EG 
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG------IHPNVVFFNTIMCNLCTEGR 499

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V KA+ L   M+     PD+++Y ++IRG C     +EA +L   M+  G++P+  T++ 
Sbjct: 500 VMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNT 559

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C++G++D A  + + M+  G+ P   TYNT++ G   T +   A++L+++M ++G
Sbjct: 560 LLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               + +YN ++N   KN  V+EAL ++  + SK ++  ++T+N +   L +  + E A+
Sbjct: 620 KQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAM 679

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  +  N +  D  TY    + L + G + E   +F  +  S    N +  N L+
Sbjct: 680 NLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLV 736



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 195/396 (49%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNI+F   AK       + +F ++   GL P++  ++ LI+  CK+GRV    +   +++
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN V FTSL+ GLC   +  +A  LF +       P+V  +NT++  LC  G  +
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L + M        V  +P+ ++YN +I G C  G  D+A +L   M    + P+  
Sbjct: 502 KAQRLIDLMER------VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY +++ G+C     ++A  +F EM+  G+ P VVT++ I+  L K  +  +A  L   M
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G   + YTYN +++G    + +D A K+F S+ S     D++++N +I    K+   
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A++L++ + + G+ P V TY  +   L E   +E    +F EM ++  A ++   N  
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  L   G +  A      I +  + L   + + LI
Sbjct: 736 VRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLI 771


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  254 bits (649), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 142/426 (33%), Positives = 225/426 (52%), Gaps = 11/426 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL IF   +      P + ++N +   L K+      + LF+ L   G  PD+ T++ LI
Sbjct: 20  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLI 79

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK G +     + G +      PN VT++ LI GLC   RI EA  L  +    +C+
Sbjct: 80  DSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 139

Query: 210 --PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ TYN+ ++GLC+   T  A  L   + +G+    +   P+TVT++T+IDGLCK G
Sbjct: 140 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS----LRVSPDTVTFSTLIDGLCKCG 195

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  +F  M      P+V+TY +++ G C A+    A  +   M+D+GV PDV+T+S
Sbjct: 196 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 255

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNT-----YTYNTLIDGYCLTDKIDHARKLFV 382
           V++D  CK  ++D+A  LL  M  RG  PN       T+N LI G C     + A  LF 
Sbjct: 256 VLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFE 315

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M +     DV+++  LI+  CK   VE A  +   M + G+ P VVTYN L  GL +  
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++E A +  +EM  +    D+ TY + +  LC++    +AL+L   ++   ++ + V+YN
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 435

Query: 503 CLIDGL 508
            L+DGL
Sbjct: 436 ILVDGL 441



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 220/407 (54%), Gaps = 12/407 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFK-RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V+ +NI+   L +       L +F+  +   G+ P I T++ +IN  CK   +  G  + 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
             ++     P+ VT+ +LI  LC    + EA  L        C P+V TY+ LINGLC+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN-- 283
           G    A  L +EM   + +      PN +TYN+ +DGLCK+    +A EL   ++D +  
Sbjct: 121 GRIDEARELIQEMTRKSCDV----LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 176

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++PD VT++++I G C     +EA  +F +M+  G  P+V+T++ +++ LCK  KM++A 
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC-----MHDVVSYNT 398
            ++E M+ +GV P+  TY+ L+D +C   ++D A +L   M S GC     + D V++N 
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI   CK  + E+A +L+ EM++K ++P V+T+  L  GL +  QVE A  + D M    
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           V  +  TYN  + GLCKSG + EA +    +  S    + ++Y  L+
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLV 403



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 220/413 (53%), Gaps = 15/413 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K    +    L   ++S G  P++ T+S+LIN  CK+GR+     +
Sbjct: 70  PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 129

Query: 165 LGRILR-SC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHR--VFACEPDVFTYNTLIN 220
           +  + R SC   PN +T+ S + GLC +S   EA  L    R       PD  T++TLI+
Sbjct: 130 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 189

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G    A ++F++M  G    G V  PN +TYN +++GLCK   +++A  +   M 
Sbjct: 190 GLCKCGQIDEACSVFDDMIAG----GYV--PNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV-----VTFSVIMDELCK 335
           D+ + PDV+TY+ ++  FC A+  +EA  L   M  +G  P+V     VTF++++   CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G  ++AS L E M+ + + P+  T+  LIDG C   +++ AR +   M + G   +VV+
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YN L++  CK+  +EEA     EM+S G  P  +TY +L   L    + + AL+L  E++
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                 DT TYN  +DGL KSG   +A+ +   +    ++ +  ++     GL
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 191/375 (50%), Gaps = 3/375 (0%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL--FPDIYTHSILINCFCKMGRVSHGF 162
           P + ++N     L K         L + L    L   PD  T S LI+  CK G++    
Sbjct: 142 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 201

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   ++   + PN +T+ +L+ GLC   ++  A A+          PDV TY+ L++  
Sbjct: 202 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      AL L   MA+  G    V  P+ VT+N +I G CK G  ++A  LF +M  +
Sbjct: 262 CKASRVDEALELLHGMAS-RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ PDV+T+ ++I G C A     A+ +   M + GV P+VVT++ ++  LCK+G++++A
Sbjct: 321 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 380

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            + LE M+  G  P++ TY +L+   C   + D A +L   ++S G   D V+YN L++ 
Sbjct: 381 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 440

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
             K+   E+A+++  EM+ KG +P   T+   F GL     +   ++L   +    +  D
Sbjct: 441 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPD 500

Query: 463 TYTYNNFIDGLCKSG 477
             T ++ +D +C+SG
Sbjct: 501 ATTCSSILDWVCRSG 515



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/307 (37%), Positives = 172/307 (56%), Gaps = 18/307 (5%)

Query: 212 VFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           V  YN ++  LCR G T  AL +F  EMA      GV   P  VTYNTII+GLCK   + 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNDLG 54

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
              ELF ++ +   +PDVVTY ++I   C A D  EA+RL  +M  +G  P+VVT+SV++
Sbjct: 55  AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLI 114

Query: 331 DELCKNGKMDKASRLLELMIWRGVN--PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           + LCK G++D+A  L++ M  +  +  PN  TYN+ +DG C       A +L  S+  +G
Sbjct: 115 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DG 173

Query: 389 CMH---DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +    D V+++TLI+  CK   ++EA S++ +M++ G  P V+TYN L  GL +  ++E
Sbjct: 174 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 233

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI-----VS 500
           RA  + + M    V  D  TY+  +D  CK+  V EALEL   +       N+     V+
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVT 293

Query: 501 YNCLIDG 507
           +N LI G
Sbjct: 294 FNILIAG 300



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 189/369 (51%), Gaps = 21/369 (5%)

Query: 55  SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
           SLR++  D  +    +   CK  GQ D       EA  +FD M+      P V ++N L 
Sbjct: 174 SLRVS-PDTVTFSTLIDGLCKC-GQID-------EACSVFDDMI-AGGYVPNVITYNALV 223

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL-GRILRSC- 172
             L K    +   ++ + +   G+ PD+ T+S+L++ FCK  RV     +L G   R C 
Sbjct: 224 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 283

Query: 173 ---FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+ VTF  LI G C      +A+ALF +      +PDV T+  LI+GLC+ G   
Sbjct: 284 PNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 343

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A ++ + M N     GV   PN VTYN ++ GLCK G +++A +   +M      PD +
Sbjct: 344 AARDILDLMGN----LGV--PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 397

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY S++   C A+  ++A +L  E+   G  PD VT+++++D L K+GK ++A  +LE M
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + +G  P+++T+     G   +  +    +L   + + G + D  + +++++W C++  +
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKL 517

Query: 410 EEALSLYSE 418
           ++  ++  E
Sbjct: 518 DDVKAMIKE 526



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 393 VVSYNTLINWYCKNKDVEEALSLY-SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           V  YN ++   C+  D   AL ++  EM   G+ PT+VTYNT+  GL + + +   ++LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +E+       D  TYN  ID LCK+G + EA  L   +       N+V+Y+ LI+GL
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 248/454 (54%), Gaps = 11/454 (2%)

Query: 55  SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
           SLR+      S +   +ER +S     ++ I  N+AL +F  M   HP P  V  F+ L 
Sbjct: 32  SLRICNSRAFSGRSDYRERLRSG----LHSIKFNDALTLFCDMAESHPLPSIVD-FSRLL 86

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
             +AK   Y+ V+SLF+ L   G+  D+Y+ + LI+CFC+  R+S     LG++++  F 
Sbjct: 87  IAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE 146

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+ VTF SL+ G C  +R  EA +L  +      EP+V  YNT+I+ LC  G    AL++
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            + M     + G+  +P+ VTYN++I  L   G    +  +   M    I+PDV+T++++
Sbjct: 207 LKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I  +       EAK+ + EM+ + V P++VT++ +++ LC +G +D+A ++L +++ +G 
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  TYNTLI+GYC   ++D   K+   M  +G   D  +YNTL   YC+      A  
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +   M+S G+ P + T+N L  GL +  ++ +AL   ++++++       TYN  I GLC
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+  V +A  LF ++       ++++Y  ++ GL
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 7/218 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L  +   D    +   L S G FP+  T++ LIN +CK  RV  G  +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R     +  T+ +L +G C   +   A  +  +       PD++T+N L++GLC 
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL   E++       G++      TYN II GLCK   V+ A  LF  +  + +
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGII------TYNIIIKGLCKADKVEDAWYLFCSLALKGV 460

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQP 321
           +PDV+TY +++ G      W EA  L+ +M  + G+ P
Sbjct: 461 SPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 144/421 (34%), Positives = 227/421 (53%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL +F  M+   P P  +  F  L   +AK   YD V+SLF+++   G+ P + T +I
Sbjct: 65  NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++C C   +       LG++++  F P+ VTFTSL+ G C  +RI +A ALF +     
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+V TY TLI  LC+  H   A+ LF +M   NG      +PN VTYN ++ GLC+ G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIG 237

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A  L   M    I P+V+T+T++I  F       EAK L+  M+   V PDV T+ 
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ LC  G +D+A ++  LM   G  PN   Y TLI G+C + +++   K+F  M   
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + + ++Y  LI  YC     + A  ++++M S+   P + TYN L  GL    +VE+A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L +F+ MR+  +  +  TY   I G+CK G V +A +LF ++     + N+++Y  +I G
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477

Query: 508 L 508
            
Sbjct: 478 F 478



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 187/343 (54%), Gaps = 7/343 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +FD +L M    P V ++  L  CL KN+H +  + LF ++ + G  P++ T++ L
Sbjct: 171 DAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +   C++GR      +L  +++    PN +TFT+LI       ++MEA  L+      + 
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFTY +LINGLC  G    A  +F  M   NG     C PN V Y T+I G CK   
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCKSKR 343

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+   ++F +M  + +  + +TYT +I+G+C     + A+ +F +M  +   PD+ T++V
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LC NGK++KA  + E M  R ++ N  TY  +I G C   K++ A  LF S+ S G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
              +V++Y T+I+ +C+   + EA SL+ +M   G  P    Y
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 215/384 (55%), Gaps = 6/384 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N++   L K   +DT+  ++  + + G  P++ T+  LI+  C+ G     F +
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P  V +T LI+GLC ESRI EA ++F   R     P+++TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL L+ EM  G+G       PN VT+  +IDGLCK   +  A++  + M    +
Sbjct: 276 IAHVKKALELYXEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++  Y  +I G+C A + +EA  L  E+    + PDV T+S+++  LC   +M++A  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  +G  PN  TYNTLIDGYC    ++ A ++   M   G   ++++++TLI+ YC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +E A+ LY+EM+ KG+ P VV Y  L  G F+    + A +L  EM+   +  + +
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 465 TYNNFIDGLCKSGFVLEALELFRA 488
           T +  IDGLCK G + +A++LF A
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 221/416 (53%), Gaps = 9/416 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ + R+  S    + F +L    ++    +  L ++ +++   + P +   +++++  
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGL 168

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K GR    + V G ++    +PN VT+ +LI G C +   ++A  LF +       P V
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y  LI GLC       A ++F  M N     G++  PN  TYNT++DG CK   V KA
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNS----GML--PNLYTYNTMMDGYCKIAHVKKA 282

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL+ +M  + + P+VVT+  +I G C  ++   A++  I+M   GV P++  ++ ++D 
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G + +A  L   +    + P+ +TY+ LI G C  D+++ A  L   M+  G + +
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V+YNTLI+ YCK  ++E+A+ + S+M  KGI+P ++T++TL  G  +  ++E A+ L+ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM    +  D   Y   IDG  K G   EA  L + ++++    N+ + +CLIDGL
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 194/364 (53%), Gaps = 16/364 (4%)

Query: 148 LINCFCKMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           LI C  K  R       F VL R+  S FTPN   F  LI        + EA  ++ K  
Sbjct: 96  LIQCLQKSRRSRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMD 153

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGL 263
           V    P +   N +++GL + G       ++ +M A G         PN VTY T+IDG 
Sbjct: 154 VL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG-------ASPNVVTYGTLIDGC 203

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C++G   KA  LF +M ++ I P VV YT +IRG C  +  +EA+ +F  M + G+ P++
Sbjct: 204 CRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNL 263

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ +MD  CK   + KA  L   M+  G+ PN  T+  LIDG C TD++  ARK  + 
Sbjct: 264 YTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S G + ++  YN LI+ YCK  ++ EALSL+SE+    I P V TY+ L  GL  + +
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +E A  L  EM++     +  TYN  IDG CK G + +A+E+   + +   E NI++++ 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 504 LIDG 507
           LIDG
Sbjct: 444 LIDG 447



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 211/437 (48%), Gaps = 43/437 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD M+     P  V  + IL   L          S+F+ + ++G+ P++YT++ +
Sbjct: 211 KAFRLFDEMIEKKIFPT-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +CK+  V     +   +L     PN VTF  LI GLC    ++ A         F  
Sbjct: 270 MDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEE-------------------------MANGNG 243
            P++F YN LI+G C+ G+   AL+L  E                         M   +G
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 244 EFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
               + K    PN VTYNT+IDG CKEG ++KA E+  +M ++ I P+++T++++I G+C
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A     A  L+ EM+ +G+ PDVV ++ ++D   K+G   +A RL + M   G++PN +
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 360 TYNTLIDGYCLTDKIDHARKLFVS-------------MESNGCMHDVVSYNTLINWYCKN 406
           T + LIDG C   +I  A KLF++             ++ + C  + V Y  LI   C +
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +A   +S+M   G++P V T   +  G F    +   + L  ++ +  +  ++  Y
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629

Query: 467 NNFIDGLCKSGFVLEAL 483
                G  +SG++  AL
Sbjct: 630 RVLAKGYEESGYLKSAL 646



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 178/433 (41%), Gaps = 39/433 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     K  + +  + +  ++   G+ P+I T S LI+ +CK G++     +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ V +T+LI G   +    EA  L  + +     P+VFT + LI+GLC+
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 225 TGHTIVALNLF------EEMANGNGEFG-VVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            G    A+ LF      +   +   E    +C PN V Y  +I GLC +G + KA + F 
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+   + PDV T   +I+G   A    +   L  +++  G+ P+   + V+     ++G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 338 KMDKASRLLELMIWRGVNP---------NTYTYNTLIDGYCLTDKID-HARKL------- 380
            +  A          GV P          +YT  +      +T+K + H+  L       
Sbjct: 641 YLKSALSF----CGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHS 696

Query: 381 ------FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
                 F ++      H+++     I      +   +AL L+ +M     +P +VT    
Sbjct: 697 FVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRP-NKALQLFRQMQMDDXQPDIVTVTVA 755

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                ++  ++    +   +R   +  D    N+ I+   K G +  A  LF    D   
Sbjct: 756 LSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLF----DGTQ 811

Query: 495 ELNIVSYNCLIDG 507
           + ++ ++  +I G
Sbjct: 812 KKDVTTWTSMIVG 824



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 21/199 (10%)

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           N+A +LF +M     QPD+VT +V +      G +D    +   +  RG++ +    N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML---- 420
           I+ Y    +I  AR+LF   +      DV ++ ++I  +  +   EEAL L++EM     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 421 ------------SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYN 467
                       S  + P  VT+  + +       VE   + F  M+ ++ +      + 
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 468 NFIDGLCKSGFVLEALELF 486
             +D LC++G + EA E  
Sbjct: 907 CMVDLLCRAGLLTEAYEFI 925



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 21/241 (8%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           PSP  +    + F     ++  +  L LF+++      PDI T ++ ++    +G +  G
Sbjct: 710 PSPHEILK-KVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMG 768

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +   I       +     SLI        I  A  LF   +    + DV T+ ++I G
Sbjct: 769 EWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVG 824

Query: 222 LCRTGHTIVALNLFEEMA-----------NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
               G    AL LF EM            NG  E  +V  PN VT+  ++      G V+
Sbjct: 825 HALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVL-PNDVTFMGVLMACSHAGLVE 883

Query: 271 KAKELFLKMK-DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + K+ F  MK D ++ P +  +  ++   C A    EA    ++M    V+P+ V +  +
Sbjct: 884 EGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTL 940

Query: 330 M 330
           +
Sbjct: 941 L 941



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 37/215 (17%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAAL---FTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
           P+ VT T  +   CA+   ++       + +HR    + D+   N+LIN   + G    A
Sbjct: 747 PDIVTVTVALSA-CADLGALDMGEWIHAYIRHR--GLDTDLCLNNSLINMYSKCGEIGTA 803

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN-------- 283
             LF+             K +  T+ ++I G    G  ++A +LF +MK+ N        
Sbjct: 804 RRLFDGTQ----------KKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKR 853

Query: 284 --------INPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQPDVVTFSVIMDELC 334
                   + P+ VT+  V+    +A    E K+ F  M  D  ++P +  F  ++D LC
Sbjct: 854 NGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLC 913

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           + G + +A    E ++   V PN   + TL+ G C
Sbjct: 914 RAGLLTEA---YEFILKMPVRPNAVVWRTLL-GAC 944


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 220/437 (50%), Gaps = 41/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS-------------------- 146
           VS+FNIL   L K       + + + + S GL PD  T +                    
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 147 ---------------ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
                          +LIN FCK GR+      +   +   F P+  T+ +L+ GLC   
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
               A  +     +   +PD++TYN+LI+GLC+ G    A+ + ++M + +      C P
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD------CSP 376

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N VTYN II  LCKE  VD+A E+   +  + I PDV T+ S+I+G C +++   A  LF
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM  +G +PD  T+++++D LC + K+++A  LL+ M   G   N   YNTLIDG+C  
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            +I+ A ++F  ME  G   D V+YNTLI+  CK+K VE+A  L  +M+ +G++P   TY
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N+L     +   +++A  +   M  +    D  TY   I GLCK+G V  A  L R+I+ 
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616

Query: 492 SKYELNIVSYNCLIDGL 508
               L   +YN +I  L
Sbjct: 617 KGMVLTPHAYNPVIQAL 633



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/376 (35%), Positives = 207/376 (55%), Gaps = 12/376 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L K  H    + +   +   GL PDIYT++ LI+  CK+G +     +
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEA---AALFTKHRVFACEPDVFTYNTLING 221
           L +++    +PNAVT+ ++I  LC E+R+ EA   A L T   +    PDV T+N+LI G
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGIL---PDVCTFNSLIQG 422

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC + +   A++LFEEM  G G     C+P+  TYN +ID LC    +++A  L  +M+ 
Sbjct: 423 LCLSSNHKSAMDLFEEM-KGKG-----CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
                +VV Y ++I GFC      EA+ +F EM  QGV  D VT++ ++D LCK+ +++ 
Sbjct: 477 NGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVED 536

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A++L++ MI  G+ P+ +TYN+L+  +C T  I  A  +  +M S+GC  D+V+Y TLI+
Sbjct: 537 AAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLIS 596

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   V+ A  L   +  KG+  T   YN +   LF+ ++   A++LF EM       
Sbjct: 597 GLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPP 656

Query: 462 DTYTYNNFIDGLCKSG 477
           D  TY     GLC  G
Sbjct: 657 DAITYKIVYRGLCNGG 672



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 209/418 (50%), Gaps = 6/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E + I   M   +   P    +N+L   L        V S    +    +  D+ T +I
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   CK  +V    +++  +     +P+  TFT++++G      +  A  +  +   + 
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C     T N LING C+ G    AL+  +E  +         +P+  TYNT+++GLCK G
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG------FRPDQFTYNTLVNGLCKIG 322

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A E+   M    ++PD+ TY S+I G C   +  EA ++  +M+ +   P+ VT++
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 382

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+  LCK  ++D+A+ +  L+  +G+ P+  T+N+LI G CL+     A  LF  M+  
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D  +YN LI+  C ++ +EEAL+L  EM   G    VV YNTL  G  +  ++E A
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEA 502

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            ++FDEM    V+ D+ TYN  IDGLCKS  V +A +L   +       +  +YN L+
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 41/337 (12%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           +  +PD   YN L+N L       +  +    M           + +  T+N +I  LCK
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR------IRHDVSTFNILIKALCK 215

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              V  A  +  +M    ++PD  T+T++++G+    + + A R+  +M++ G     VT
Sbjct: 216 AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVT 275

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            +V+++  CK G++D+A   ++  +  G  P+ +TYNTL++G C      HA ++  +M 
Sbjct: 276 VNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML------------------------- 420
             G   D+ +YN+LI+  CK  ++EEA+ +  +M+                         
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395

Query: 421 ----------SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
                     SKGI P V T+N+L  GL      + A+ LF+EM+      D +TYN  I
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D LC S  + EAL L + +  +    N+V YN LIDG
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 42/285 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N+L   L  ++  +  L+L K +   G   ++  ++ LI+ FCK  R+     +
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     + ++VT+ +LI GLC   R+ +AA L  +  +    PD FTYN+L+   C+
Sbjct: 506 FDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD-------------- 270
           TG    A ++ + M +        C P+ VTY T+I GLCK G V               
Sbjct: 566 TGDIKKAADIVQTMTSSG------CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 619

Query: 271 ---------------------KAKELFLKMKDENINPDVVTYTSVIRGFCYAND-WNEAK 308
                                +A  LF +M D++  PD +TY  V RG C       EA 
Sbjct: 620 VLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAV 679

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
              +EM+++G  P+  +F ++ + LC     D   +L+++++ + 
Sbjct: 680 DFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKA 724



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 24/228 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  + D M+ M    P   ++N L     K         + + + S+G  PDI T++ 
Sbjct: 535 EDAAQLMDQMI-MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593

Query: 148 LINCFCKMGRVSHGFVVLGRILRS------CFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           LI+  CK GRV     V  R+LRS        TP+A  +  +I+ L   +R  EA  LF 
Sbjct: 594 LISGLCKAGRVQ----VASRLLRSIQMKGMVLTPHA--YNPVIQALFKRNRTHEAMRLFR 647

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
           +    +  PD  TY  +  GLC  G  I  A++   EM     E G +  P   ++  + 
Sbjct: 648 EMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMI----ERGNI--PEFSSFVMLA 701

Query: 261 DGLCKEGFVDKAKELF-LKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +GLC     D   +L  + M+    +   +   S IRGF     + +A
Sbjct: 702 EGLCTLSMDDTLVKLVDMIMEKAKFSEREI---STIRGFLKIRKFQDA 746


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 211/376 (56%), Gaps = 9/376 (2%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           L  +G  PD+ T+++LI+ +CK G +     +L R+     +P+ VT+ ++++ LC   +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA  +  +     C PDV TY  LI   C+      A+ L +EM +        CKP+
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKG------CKPD 281

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYN +I+G+CKEG +D+A      M      P+V+T+  ++R  C    W +A++   
Sbjct: 282 VVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLA 341

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM+ +G  P VVTF+++++ LC+ G + +A  +LE M   G  PN+ +YN L+   C   
Sbjct: 342 EMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K++ A +    M S GC  D+V+YNTL+   CK+  V+ A+ + +++ SKG  P ++TYN
Sbjct: 402 KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYN 461

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           T+  GL ++ + + A+KL DEM+   +  D  TY+  + GL + G V EA+  F  + + 
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521

Query: 493 KYELNIVSYNCLIDGL 508
             + N ++YN ++ GL
Sbjct: 522 GVKPNAITYNSIMLGL 537



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 214/405 (52%), Gaps = 11/405 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L     K     + L L  R++ +   PD+ T++ ++   C  G++     V
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEV 234

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L R + R C+ P+ +T+T LI+  C ES + +A  L  + R   C+PDV TYN LING+C
Sbjct: 235 LDRQMQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+     M +    +G  C+PN +T+N I+  +C  G    A++   +M  + 
Sbjct: 294 KEGRLDEAIRFLNHMPS----YG--CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P VVT+  +I   C       A  +  +M   G  P+ ++++ ++  LCK+ KM++A 
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L++M+ RG  P+  TYNTL+   C   K+D A ++   + S GC   +++YNT+I+  
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K    ++A+ L  EM  KG+KP ++TY+TL  GL    +V+ A+  F ++    V  + 
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN+ + GLCK+   + A++    +     +    SY  LI+GL
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 180/353 (50%), Gaps = 9/353 (2%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G +  GF  L  ++     P+ +  TSLI+GLC   +  +A  +          PDV TY
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N LI+G C+TG    AL L + M+           P+ VTYNTI+  LC  G + +A E+
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRMS---------VSPDVVTYNTILRTLCDSGKLKEAMEV 234

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +       PDV+TYT +I   C  +   +A +L  EM D+G +PDVVT++V+++ +CK
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G++D+A R L  M   G  PN  T+N ++   C T +   A K    M   GC   VV+
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +N LIN+ C+   +  A+ +  +M   G  P  ++YN L   L +  ++ERA++  D M 
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                 D  TYN  +  LCK G V  A+E+   +        +++YN +IDGL
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 184/386 (47%), Gaps = 27/386 (6%)

Query: 49  TSKLKESLRLTVKDRASLKK----------FLKERCKSSGQGDINLITPNEALCIFDYML 98
           + KLKE++   V DR   ++           ++  CK SG G        +A+ + D M 
Sbjct: 225 SGKLKEAME--VLDRQMQRECYPDVITYTILIEATCKESGVG--------QAMKLLDEM- 273

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R     P V ++N+L   + K    D  +     + S G  P++ TH+I++   C  GR 
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRW 333

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                 L  ++R   +P+ VTF  LI  LC +  I  A  +  K     C P+  +YN L
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPL 393

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++ LC+      A+   + M +        C P+ VTYNT++  LCK+G VD A E+  +
Sbjct: 394 LHALCKDKKMERAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           +  +  +P ++TY +VI G       ++A +L  EM  +G++PD++T+S ++  L + GK
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A      +   GV PN  TYN+++ G C   +   A      M + GC     SY  
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGI 424
           LI         +EAL L +E+ S+G+
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGV 593



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  L +NG++++  + LE M+ RG  P+     +LI G C T K   A ++   +E +G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + DV++YN LI+ YCK  ++  AL L   M    + P VVTYNT+   L +  +++ A++
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + D   +     D  TY   I+  CK   V +A++L   +RD   + ++V+YN LI+G+
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/415 (33%), Positives = 223/415 (53%), Gaps = 13/415 (3%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R H   P   ++N L   L          +L++R+  AG  PD+ T++ L++ FCK+G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +    ++  F P+ VT+ +LI G C   ++ EA  +  +       PDV TYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELF 276
           L+NGLC+ G    A  L  +             PN +TY+T+I GLC+E   V +A +LF
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKG---------FSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             +  +   P+V TY  +I G    +  NEA  LF  ++  G++PD +T++V +D LCK 
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A  +L+ M  +G  P+  ++N +I+G C   ++D A  L   ME+ GC  + +S+
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ---VERALKLFDE 453
           NTLI   C+    ++A++ + EML +G+KPTVVTYN L  GL +  Q   ++ A+ LFD 
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M       D  TY+  IDGL K+G + +A  L  A+       N+ +YN LI GL
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 406



 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 220/422 (52%), Gaps = 14/422 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +++ M++   SP  V ++N L     K    D  L +F      G  PD+ T++ 
Sbjct: 27  SDAQALYERMIKAGYSPD-VVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNA 85

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN FCK  ++     +L R++     P+ VT+ SL+ GLC   R+ EA  L        
Sbjct: 86  LINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---G 142

Query: 208 CEPDVFTYNTLINGLCRTGHTIV-ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             P+V TY+TLI+GLCR    +  AL LF  +     E      P   TYN +IDGL KE
Sbjct: 143 FSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE------PEVPTYNILIDGLLKE 196

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V++A ELF  +    + PD +TYT  I G C A    +A  +  +M ++G  PDVV+ 
Sbjct: 197 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 256

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + +++ LCK  ++D+A  LL  M  +G +PN  ++NTLI G C   K   A   F  M  
Sbjct: 257 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 316

Query: 387 NGCMHDVVSYNTLINWYCKNKD---VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
            G    VV+YN L++  CK +    ++EA++L+  M+ KG  P VVTY+ L  GL +  +
Sbjct: 317 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 376

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           ++ A +L   M       + YTYN+ I GLC    V EALELF A+ +     + ++Y  
Sbjct: 377 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGT 436

Query: 504 LI 505
           +I
Sbjct: 437 II 438



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 181/385 (47%), Gaps = 78/385 (20%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL IFD  ++     P V ++N L     K    D    + +R+ S  L PD+ T++ 
Sbjct: 62  DEALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 148 LINCFCKMGRV---------------------------------SHGFVVLGRILRSCFT 174
           L+N  CK GRV                                 S    + G +L+  + 
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P   T+  LI GL  E R+ EA  LF+       EPD  TY   I+GLC+ G    AL +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            ++M          C P+ V++N +I+GLCKE  VD+A+ L   M+ +  +P+ +++ ++
Sbjct: 241 LKDMDEKG------CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN------------------ 336
           I G C A  W +A   F EM+ +GV+P VVT+++++D LCK                   
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 337 --------------------GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
                               GK+D A RLL  M  +G  PN YTYN+LI G C  +K+D 
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 377 ARKLFVSMESNGCMHDVVSYNTLIN 401
           A +LFV+M   GC+ D ++Y T+I+
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTIIS 439


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 230/423 (54%), Gaps = 8/423 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P E+  + + M+    +P  V +FN +    A++ + +    +++ +  +G  PD  ++ 
Sbjct: 26  PEESYKVLEEMMAAGCNPD-VFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 84

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI+   K+G++     +L  ++    TP+   ++SL++ L    R+  A++LF +    
Sbjct: 85  ILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRG 144

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD   +  LI GLC+ G    A   F++M          C+PN   YN ++ GLC  
Sbjct: 145 GHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG------CQPNVPVYNVLLHGLCSS 198

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A  LF +MK  + +PDVVTY +++   C A    E  +LF  M   G  P+V+TF
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++  LC+ G+++KA  +   M+  G  PN YTY TLI G C  +K+  AR+LF  M  
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVE 445
                D V+YN+LI  YCK   ++EA  LY EM    G++PT+VT+NTL  G  ++ ++ 
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           RA +L  EM    +AAD+ TY   I GL ++  + EALE+++ +R+ K+ L+ VS    +
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 438

Query: 506 DGL 508
            GL
Sbjct: 439 GGL 441



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 215/417 (51%), Gaps = 8/417 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++ +M+     P  VS ++IL   LAK    D  L +   +   G  P +  +S L+   
Sbjct: 67  VYQHMVESGYKPDNVS-YHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K  RV H   +   ++R    P+ + F  LI GLC   ++ +A+  F +     C+P+V
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN L++GLC +G    A  LF EM + +      C P+ VTYNT++D +CK   V++ 
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHS------CSPDVVTYNTLLDAVCKARRVEEG 239

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +LF  M+     P+V+T++++I G C   +  +A  +F  M++ G +P+  T++ ++  
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN-GCMH 391
           LC+  K+ +A  L E M    + P+   YN+LI GYC    +D A KL+  M    G   
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            +V++NTLI+ +CK   +  A  L +EM +KG+     TY  L  GL    +++ AL+++
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +MR      D  +  +F+ GLCK+G + +A  +F A R S    N  ++  L + L
Sbjct: 420 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 191/376 (50%), Gaps = 8/376 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +FD M+R    P  +  + ++ G     K  D     FK++   G  P++  +++
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDAS-ERFKQMPKHGCQPNVPVYNV 190

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  C  G++     +   +     +P+ VT+ +L+  +C   R+ E   LF   R   
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T++TLI+GLCRTG    AL +F  M          CKPN  TY T+I GLC+  
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKYTYTTLISGLCRAE 304

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTF 326
            V +A+ELF KM    I PD V Y S+I G+C     +EA++L+ EM    G+QP +VTF
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 364

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  CK GK+ +A+ L+  M  +G+  ++ TY  LI G     K+D A +++  M  
Sbjct: 365 NTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE 424

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
              + D VS  + +   CK  ++++A +++      G  P   T+  L   L ++ +VE 
Sbjct: 425 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484

Query: 447 ALKLFDEMRRNHVAAD 462
           A KL +  +   + A 
Sbjct: 485 AQKLMEPAKARDITAQ 500



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 179/332 (53%), Gaps = 6/332 (1%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  T++S+IK L  E++  E+  +  +     C PDVF +N ++ G  R+ +   A  ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           + M     E G   KP+ V+Y+ +I GL K G +D++ ++  +M      P +  Y+S++
Sbjct: 69  QHMV----ESGY--KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           R    A   + A  LF EM+  G  PD + F  ++  LC+ GK+  AS   + M   G  
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN   YN L+ G C + +++ A  LF  M+S+ C  DVV+YNTL++  CK + VEE   L
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           +  M + G  P V+T++TL  GL    ++E+AL++F  M       + YTY   I GLC+
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  V++A ELF  +  +    + V+YN LI G
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAG 334



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 200/404 (49%), Gaps = 8/404 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E+L I   M+ M    P + +++ L   LAK +  D   SLF  +   G  PD      
Sbjct: 97  DESLKILSEMV-MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYE 155

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+ G+V        ++ +    PN   +  L+ GLC+  ++ +A  LF + +  +
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TYNTL++ +C+         LFE M       G V  PN +T++T+I GLC+ G
Sbjct: 216 CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA----GYV--PNVITFSTLIHGLCRTG 269

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++KA E+F  M +    P+  TYT++I G C A    +A+ LF +M    + PD V ++
Sbjct: 270 ELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYN 329

Query: 328 VIMDELCKNGKMDKASRLL-ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            ++   CK G MD+A +L  E+    G+ P   T+NTLIDG+C   K+  A +L   M +
Sbjct: 330 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 389

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D  +Y  LI    +   ++EAL +Y +M  K      V+  +   GL +   +++
Sbjct: 390 KGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 449

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           A  +F+  R++    +  T+    + L K G V +A +L    +
Sbjct: 450 AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 493



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 198/369 (53%), Gaps = 9/369 (2%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           +++T+S +I    K  +    + VL  ++ +   P+   F  +++G  A S  ME A   
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGF-ARSNNMEKAREV 67

Query: 201 TKHRVFAC-EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
            +H V +  +PD  +Y+ LI+GL + G    +L +  EM    G+      P+   Y+++
Sbjct: 68  YQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVM-RGQ-----TPSMQAYSSL 121

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +  L K   VD A  LF +M     +PD + +  +I G C A    +A   F +M   G 
Sbjct: 122 VRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGC 181

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           QP+V  ++V++  LC +G++++A+ L   M     +P+  TYNTL+D  C   +++   K
Sbjct: 182 QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCK 241

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF +M + G + +V++++TLI+  C+  ++E+AL ++  ML  G KP   TY TL  GL 
Sbjct: 242 LFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC 301

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR-DSKYELNI 498
              +V +A +LF++M +  +  D   YN+ I G CK G + EA +L+R +   +  +  I
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361

Query: 499 VSYNCLIDG 507
           V++N LIDG
Sbjct: 362 VTFNTLIDG 370



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 157/298 (52%), Gaps = 6/298 (2%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +VFTY+++I  L +      +  + EEM          C P+   +N ++ G  +   ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEM------MAAGCNPDVFAFNGVMQGFARSNNME 62

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           KA+E++  M +    PD V+Y  +I G       +E+ ++  EM+ +G  P +  +S ++
Sbjct: 63  KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L K  ++D AS L + MI  G +P+   +  LI G C   K+  A + F  M  +GC 
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V  YN L++  C +  +E+A +L++EM S    P VVTYNTL   + +  +VE   KL
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F+ MR      +  T++  I GLC++G + +ALE+F ++ ++  + N  +Y  LI GL
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 35/265 (13%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV--------------- 323
           M+D+NI  +V TY+S+I+         E+ ++  EMM  G  PDV               
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 324 --------------------VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
                               V++ +++  L K GK+D++ ++L  M+ RG  P+   Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L+       ++DHA  LF  M   G   D + +  LI   C+   V++A   + +M   G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P V  YN L  GL    Q+E+A  LF EM+ +  + D  TYN  +D +CK+  V E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +LF A+R + Y  N+++++ LI GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGL 265


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 230/421 (54%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +   M++    P  ++  ++L G  +  K  D +  +FKR+   G+ PD++T++ 
Sbjct: 255 DKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAI-GVFKRMCRDGVEPDVFTYNT 313

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CK GR      +   +++    PN+ T+ +L+ G   E  +++   L        
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG 373

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD + +N LI    + G    A+ LF +M            P+TVTY  ++D LC  G
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQG------LNPDTVTYGIVMDALCMVG 427

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F ++  E + PD V + ++I G C  + W++A+ L +EM+ +G+ P+ + F+
Sbjct: 428 KVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFN 487

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ LCK G + +A  + +LM+   V  +  TYNTLIDGYCL  K+D A KL   M  +
Sbjct: 488 TLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD 547

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V+YNT+IN YCKN  +E+A SL+ +M SKG+ P +VTY+T+  GLF+  +   A
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M ++ +  D  TYN  + GLC++    +AL +F+ +    + L   ++N +ID 
Sbjct: 608 KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667

Query: 508 L 508
           L
Sbjct: 668 L 668



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 243/529 (45%), Gaps = 86/529 (16%)

Query: 58  LTVKDRASLKKF----LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNIL 113
           L+  D   + +F    L+ R +++  G       + A   FD +L   P+   +   N  
Sbjct: 6   LSAPDGTKVSRFNLMKLQGRQEAAAAG----TDSHHAHHAFDELLH-RPTTSSIVDLNRA 60

Query: 114 FGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
               A++      +SLF+R+       + P++ T+S++I+C  ++G +   F  LGR++R
Sbjct: 61  LSDAARHSPA-VAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIR 119

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           S +T  A+TF+ L+K LC + R  EA  +   +  V  C P+VF+Y  L+ GLC    + 
Sbjct: 120 SGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQ 179

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF-VDKAKELFLKMKDENINPDV 288
            AL+L   M   +   G    P+ V+YNT+I+GL +EG  +D A  LF +M D+ ++PDV
Sbjct: 180 QALHLLHTMMVADDTRGGY-PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDV 238

Query: 289 VTYTSVI-----------------------------------RGFCYANDWNEAKRLFIE 313
           VTY S+I                                    G+C +   N+A  +F  
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M   GV+PDV T++ +M  LCKNG+  +A ++ + M+ RG  PN+ TY TL+ GY     
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGS 358

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +     L   M  NG   D   +N LI  Y K+  V++A+ L+S+M  +G+ P  VTY  
Sbjct: 359 LVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGI 418

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG--------------------- 472
           +   L  + +V+ A+  F  +    +  D   + N I G                     
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG 478

Query: 473 --------------LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                         LCK G V  A  +F  +     + ++++YN LIDG
Sbjct: 479 ICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDG 527



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 205/413 (49%), Gaps = 7/413 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+R +   P    FNIL G   K+   D  + LF ++   GL PD  T+ I+++  
Sbjct: 365 LLDMMVR-NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C +G+V       GR++    TP+AV F +LI GLCA  +  +A  L  +       P+ 
Sbjct: 424 CMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNN 483

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             +NTL+N LC+ G    A N+F+ M        V  + + +TYNT+IDG C  G VD+A
Sbjct: 484 IFFNTLLNHLCKEGMVARAKNIFDLMVR------VDVQRDVITYNTLIDGYCLHGKVDEA 537

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L   M  + + P+ VTY ++I G+C      +A  LF +M  +GV P +VT+S I+  
Sbjct: 538 AKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQG 597

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L +  +   A  L   MI  G+  +  TYN ++ G C  +  D A ++F ++       +
Sbjct: 598 LFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLE 657

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             ++N +I+   K    +EA  L++ +L++G+ P VVTY  +   L E   +E    LF 
Sbjct: 658 NRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFL 717

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + +N   A++   N  +  L + G V +A      I ++ + L   +   L+
Sbjct: 718 SLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 232/434 (53%), Gaps = 29/434 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++  +   L K + +D   ++F+++   G+ P+I T++ LI+ +  +G+      
Sbjct: 235 PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR 294

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      PN  T+ SL+  LC   R  EA   F        +P V TY  +++G  
Sbjct: 295 MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYA 354

Query: 224 RTG-----HTIVAL----------NLFEEMANGNGEFGVVCK--------------PNTV 254
             G     H ++ L          ++F    +   + G++ K              P+ V
Sbjct: 355 TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAV 414

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           +Y  +ID LCK G VD A+  F +M +E + PD+V ++S++ G C  + W + + LF EM
Sbjct: 415 SYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ G+ P++V F+ I+  LCK G++ +  RL++ +   GV P+  +YNTLIDG+CL   I
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL   M S G   D  SYNTL++ YCK   ++ A S + +MLS GI P VVTYNT+
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  M  +    D YTYN  ++GLCKS  V EA+++F+ +     
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654

Query: 495 ELNIVSYNCLIDGL 508
           +LNI+++N +I  L
Sbjct: 655 QLNIITFNIMIGAL 668



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 152/462 (32%), Positives = 239/462 (51%), Gaps = 22/462 (4%)

Query: 59  TVKDRA-SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCL 117
            V+DR   L++ + +R +S   G        +AL +FD +L  H  P  V +FN L   +
Sbjct: 7   AVRDRCLELERVIADRARSGSLG------LGDALKLFDELLP-HARPASVVAFNHLLAAV 59

Query: 118 AKNK-------HYDTVLSLFKRLNS---AGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +++          +TV+SLF R+       + P+  T+SILI CFC+MG + HGF   G 
Sbjct: 60  SRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGL 119

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           IL++ +  + +    L+ GLC   R+ EA   L  +     C PD  +YN L+ GLC   
Sbjct: 120 ILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEK 179

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL L   MA+   +    C PN V+Y+T+I+G   EG VDK   LFL+M D  I P
Sbjct: 180 RAEEALELLHMMAD---DQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPP 236

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DVVTYT+VI G C A  ++ A+ +F +M+D GV+P++ T++ ++      GK  +  R+L
Sbjct: 237 DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M   G  PN  TY +L++  C   +   AR  F SM   G    V +Y  +++ Y   
Sbjct: 297 EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATK 356

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + E   L + M++ GI P    +N  F    +   +++A+ +F++MR+  ++ D  +Y
Sbjct: 357 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSY 416

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              ID LCK G V +A   F  + +     +IV ++ L+ GL
Sbjct: 417 GALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGL 458



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 210/417 (50%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   FD M+      P V+++ I+    A       +  L   + + G+ P+ +  +I 
Sbjct: 326 EARFFFDSMIG-KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIF 384

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            + + K G +     +  ++ +   +P+AV++ +LI  LC   R+ +A   F +      
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+  +++L+ GLC          LF EM N      V   PN V +NTI+  LCKEG 
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN------VGIHPNIVFFNTILCNLCKEGR 498

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V + + L   ++   + PDV++Y ++I G C A   +EA +L   M+  G++PD  +++ 
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK G++D A      M+  G+ P   TYNT++ G   T +   A++L+++M ++G
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +YN ++N  CK+  V+EA+ ++  + SKG++  ++T+N +   L +  + E A+
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  +  N +  +  TY   ++ L + G + E   LF A+  +    N    N L+
Sbjct: 679 DLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 735



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 197/396 (49%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNI F   AK    D  + +F ++   GL PD  ++  LI+  CK+GRV    V   +++
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
               TP+ V F+SL+ GLC   +  +   LF +       P++  +NT++  LC+ G  +
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
               L + +       GV  +P+ ++YNT+IDG C  G +D+A +L   M    + PD  
Sbjct: 501 EGQRLVDSIEC----MGV--RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +Y +++ G+C A   + A   F +M+  G+ P VVT++ I+  L +  +  +A  L   M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G   + YTYN +++G C ++ +D A K+F ++ S G   +++++N +I    K    
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A+ L++ + + G+   VVTY  +   L E   +E    LF  M +N  A ++   N  
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  L   G +  A      + +  + +   + + LI
Sbjct: 735 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 192/434 (44%), Gaps = 38/434 (8%)

Query: 105 PPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           P V S+N L    CLA     D    L + + S GL PD ++++ L++ +CK GR+   +
Sbjct: 516 PDVISYNTLIDGHCLAGT--IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAY 573

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
               ++L +  TP  VT+ +++ GL    R  EA  L+        + D++TYN ++NGL
Sbjct: 574 SHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C++     A+ +F+ + +   +       N +T+N +I  L K G  + A +LF  +   
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQL------NIITFNIMIGALLKGGRKEDAMDLFAAIPAN 687

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +  +VVTY  V+          E   LF  M   G  P+    + ++  L   G + +A
Sbjct: 688 GLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTD----------------------------KI 374
              L  +  R  +    T + LI  +   +                            +I
Sbjct: 748 GAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRI 807

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A  LF  M   G   DVV+YNT+++   +     EA  LY  M++   +  + TYN +
Sbjct: 808 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 867

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL + + V+ A K+F  +    +  +  T+N  I  L K G   +A++LF AI  +  
Sbjct: 868 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGL 927

Query: 495 ELNIVSYNCLIDGL 508
             ++V+Y  + + L
Sbjct: 928 VPDVVTYRLVAENL 941



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 183/429 (42%), Gaps = 34/429 (7%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++N +   L + K +     L+  + ++G   DIYT++I++N  CK   V     +
Sbjct: 586  PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKM 645

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +       N +TF  +I  L    R  +A  LF          +V TY  ++  L  
Sbjct: 646  FQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIE 705

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G      +LF  M   NG       PN+   N ++  L   G + +A     K+ + N 
Sbjct: 706  EGSLEEFDSLFSAMEK-NG-----TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 759

Query: 285  NPDVVTYTSVIRGFC----------------------------YANDWNEAKRLFIEMMD 316
            + +  T + +I  F                              A   ++A  LF EM+ 
Sbjct: 760  SVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLM 819

Query: 317  QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            +G+ PDVVT++ I+  L + G+  +A  L   MI      N YTYN +++G C ++ +D 
Sbjct: 820  KGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDE 879

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            A K+F S+ S G   +++++N +I    K    E+A+ L++ + + G+ P VVTY  +  
Sbjct: 880  AFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAE 939

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
             L E   +E    LF  M ++    D+   N  +  L + G +  A      + +  + L
Sbjct: 940  NLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSL 999

Query: 497  NIVSYNCLI 505
               + + LI
Sbjct: 1000 EASTTSELI 1008



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 9/240 (3%)

Query: 176  NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
            N    ++LIK      RI +A +LF +  +    PDV TYNT+++GL +TG    A  L+
Sbjct: 793  NEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 849

Query: 236  EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
              M N   +       N  TYN I++GLCK   VD+A ++F  +  + +  +++T+  +I
Sbjct: 850  LSMINSRTQM------NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMI 903

Query: 296  RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
                      +A  LF  +   G+ PDVVT+ ++ + L + G +++   L   M   G  
Sbjct: 904  GALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTP 963

Query: 356  PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             ++   N L+        I  A      ++      +  + + LI+ + + +    A SL
Sbjct: 964  LDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 19/229 (8%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++A  +F  ML M    P V ++N +   L +   +     L+  + ++    +IYT++I
Sbjct: 808  DDAYSLFREML-MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            ++N  CK   V   F +   +       N +TF  +I  L    R  +A  LF       
Sbjct: 867  ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEE--MANGNGEFGVVCKPNTV----TYNTIID 261
              PDV TY             +VA NL EE  +   +G F  + K  T       N ++ 
Sbjct: 927  LVPDVVTYR------------LVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVR 974

Query: 262  GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
             L + G + +A     K+ ++N + +  T + +I  F      + AK L
Sbjct: 975  RLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/434 (32%), Positives = 224/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K +  D  + +   +   G+ P+  T++ +++ +C  G+       
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VCK-----------------------PNTV 254
            G  +    L + M   NG       F + +C                        P+TV
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T+I  LCK G V+ A   F +M DE ++P  + Y S+I   C  + W++AK L +EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+G+  D + F+ I+D  CK G++ ++ +L +LM+  GV PN  TY+TLIDGYCL  K+
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKM 530

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL  SM S G   D V+YNTLIN YCK   +E+AL L+ EM S G+ P ++TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  +  +    +  TYN  + GLCK+    EAL +F+ +  +  
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 495 ELNIVSYNCLIDGL 508
           +L   ++N +I  L
Sbjct: 651 QLETRTFNIMIGAL 664



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 218/424 (51%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P++ T+
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTY 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI   C  GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+ GLC    +  AL L + M +  G+    C P+ V+Y T+I+G  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFF 210

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +DKA   + +M D  I P+VVTY S+I   C A   ++A  +   M+  GV P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +V
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR+  +  DT TY   I  LCKSG V +A+  F  + D +     + YN L
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 505 IDGL 508
           I  L
Sbjct: 451 IHSL 454



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 222/435 (51%), Gaps = 18/435 (4%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           SSGQ       P EA+    ++ +MH     P V ++N L   L KN        +F  +
Sbjct: 281 SSGQ-------PKEAI---GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
              GL P+I T+  L+  +   G +     +L  ++R+   PN   F+ LI     + ++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            +A  +F+K R     PD  TY T+I  LC++G    A+  FE+M +          P  
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGN 444

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           + YN++I  LC     DKAKEL L+M D  I  D + + S+I   C      E+++LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  GV+P+++T+S ++D  C  GKMD+A++LL  M+  G+ P+  TYNTLI+GYC   +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL + +  + AL++F  +    +  +T T+N  I  L K G   EA +LF A+  + 
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 494 YELNIVSYNCLIDGL 508
              ++ +Y+ + + L
Sbjct: 685 LVPDVRTYSLMAENL 699



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 193/416 (46%), Gaps = 11/416 (2%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 361 LLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV        +++    +P  + + SLI  LC   +  +A  L  +        
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D   +N++I+  C+ G  I +  LF+ M       GV  KPN +TY+T+IDG C  G +D
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPNIITYSTLIDGYCLAGKMD 531

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + PD VTY ++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C  +  D A ++F ++      
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +  ++N +I    K    +EA  L++ + + G+ P V TY+ +   L E   +E    L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           F  M  N   A++   N+ +  L + G +  A      I +  + L   + +  +D
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/434 (34%), Positives = 222/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V++FNIL   L +       + + + + S GL PD  T + L+  F + G ++    +
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ +    + VT   L+ G C E RI E  +   +       PD FT+N+L+NGLCR
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328

Query: 225 TGHTIVALNLFEEMANGNGE----------FGVVCK--------------------PNTV 254
            GH   AL + + M     +          FG +CK                    PNTV
Sbjct: 329 IGHVKHALEILDVMLQEGFDPDIFTYNSLIFG-LCKLGEVEEAVEILNQMILRDFSPNTV 387

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TYNT+I  LCKE  V++A EL   +  + I PDV T+ S+I+G C  N+   A  LF EM
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             +G  PD  T+++++D LC  G++++A  LL+ M   G + N  TYNTLIDG+C   +I
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A ++F  ME  G   +VV+YNTLI+  CKN+ VEEA  L  +ML +G+KP   TYN+L
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                    +++A  +   M  N    D+ TY   I GL K+G V  A  L R ++    
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627

Query: 495 ELNIVSYNCLIDGL 508
            L   +YN +I  L
Sbjct: 628 VLAPQTYNPVIKAL 641



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 213/405 (52%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L   L +  H    L +   +   G  PDI+T++ LI   CK+G V     +
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++   F+PN VT+ +LI  LC E+++ EA  L          PDV T+N+LI GLC 
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +  +A+ LFEEM          C P+  TYN +ID LC  G +++A  L  +M+    
Sbjct: 434 TNNHRLAMELFEEMKTKG------CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + +VVTY ++I GFC      EA+ +F EM  QG+  +VVT++ ++D LCKN ++++A++
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ M+  G+ P+ +TYN+L+  +C    I  A  +  +M SNGC  D V+Y TLI    
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VE A  L   +  KG+     TYN +   LF   +   A++LF EM       D  
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667

Query: 465 TYNNFIDGLCKSGFVL-EALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY     GLC  G  + EA++    + D  +  +  S+  L +GL
Sbjct: 668 TYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGL 712



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 217/418 (51%), Gaps = 6/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M           ++N L   L        V  +  R+ S G+ PD+ T +I
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+  ++    +++  +     +P+  TFT+L++G   E  +  A  +  +     
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C     T N L++G C+ G     L+  +EM+N         +P+  T+N++++GLC+ G
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG------FRPDRFTFNSLVNGLCRIG 330

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+   M  E  +PD+ TY S+I G C   +  EA  +  +M+ +   P+ VT++
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK  ++++A+ L  ++  +G+ P+  T+N+LI G CLT+    A +LF  M++ 
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D  +YN LI+  C    +EEALSL  EM S G    VVTYNTL  G  +  ++E A
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEA 510

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            ++FDEM    ++ +  TYN  IDGLCK+  V EA +L   +     + +  +YN L+
Sbjct: 511 EEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 205/454 (45%), Gaps = 57/454 (12%)

Query: 100 MHPSP----PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN-CFCK 154
           + PSP    P   +   L   L +    D++L L   L+ A   P+    S++      K
Sbjct: 58  LSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDL---LDWASKQPNFVPSSVIYEEVLRK 114

Query: 155 MGRVSHGFVVLGRILR-----SCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKHRVFAC 208
           +G+    F  + R+L+      C      TF  LI+         EA A+       F  
Sbjct: 115 LGK-DGSFGSMRRVLQEMKHTGCEIRRG-TFLILIESYAKFELFDEAVAVVDIMEEEFGL 172

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D FTYN L+N L   G+ +  + +        G      KP+  T+N +I  LC+   
Sbjct: 173 KLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVSRG-----IKPDVTTFNILIKALCRAHQ 226

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A  +  +M    ++PD  T+T++++GF    + N A R+  +M+  G     VT +V
Sbjct: 227 IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK G++++    ++ M   G  P+ +T+N+L++G C    + HA ++   M   G
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER-- 446
              D+ +YN+LI   CK  +VEEA+ + ++M+ +   P  VTYNTL   L + +QVE   
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 447 ---------------------------------ALKLFDEMRRNHVAADTYTYNNFIDGL 473
                                            A++LF+EM+      D +TYN  ID L
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           C  G + EAL L + +  S    N+V+YN LIDG
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 41/335 (12%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P  FT   L + L R       L+L +  A+    F     P++V Y  ++  L K+G  
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLD-WASKQPNF----VPSSVIYEEVLRKLGKDGSF 121

Query: 270 DKAKELFLKMK------------------------DE------------NINPDVVTYTS 293
              + +  +MK                        DE             +  D  TY  
Sbjct: 122 GSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNF 181

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++      N     + +   M+ +G++PDV TF++++  LC+  ++  A  ++E M   G
Sbjct: 182 LLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG 241

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           ++P+  T+ TL+ G+     ++ A ++   M + GC    V+ N L++ YCK   +EE L
Sbjct: 242 LSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVL 301

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           S   EM ++G +P   T+N+L  GL  I  V+ AL++ D M +     D +TYN+ I GL
Sbjct: 302 SFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGL 361

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK G V EA+E+   +    +  N V+YN LI  L
Sbjct: 362 CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 42/266 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N+L   L      +  LSL K + S+G   ++ T++ LI+ FCK  R+     +
Sbjct: 454 PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     + N VT+ +LI GLC   R+ EAA L  +  +   +PD FTYN+L+   CR
Sbjct: 514 FDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCR 573

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD-------------- 270
            G    A ++ + M + NG     C+P++VTY T+I GL K G V+              
Sbjct: 574 AGDIKKAADIVQTMTS-NG-----CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627

Query: 271 ---------------------KAKELFLKMKDENINPDVVTYTSVIRGFCYAND-WNEAK 308
                                +A  LF +M ++   PD VTY  V RG C       EA 
Sbjct: 628 VLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAV 687

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELC 334
              +EM D+G  PD  +F ++ + LC
Sbjct: 688 DFLVEMTDKGFLPDFSSFLMLAEGLC 713


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/406 (35%), Positives = 211/406 (51%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N     L +N H    L +   +   G  PD++T++I++NC CK G++     +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L +++ R C  P+  TF +LI  LC  +R+ EA  L  +  V    PDV+T+N LIN LC
Sbjct: 344 LNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   +AL LFEEM N        C P+ VTYNT+ID LC  G + KA +L   M+   
Sbjct: 403 KVGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                +TY ++I G C      EA+ +F +M  QG+  + +TF+ ++D LCK+ K+D A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  MI  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK    + AL +   M  KG++PT   YN +   LF  + +  AL LF EM       D 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY     GLC+ G  + EA +    + D  +     S+  L +GL
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 210/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L +     T + + + ++S G+ PD  T + L+  F + G +     V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+L    +   VT   LI G C   R+ +A     +      EPD  TYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL + + M     +      P+  TYN +++ LCK G +++AK +  +M D   
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+ ++I   C  N   EA  L  ++  +GV PDV TF+++++ LCK G    A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYNTLID  C   K+  A  L   MES GC    ++YNT+I+  C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M    +  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++   +  + +E+++V+Y  LI+GL
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F  L     +    +  L +  R+   G      T ++LIN +CK+GRV      
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + + +   F P+ +T+ + + GLC    +  A  +         +PDVFTYN ++N LC+
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  +M +        C P+  T+NT+I  LC    +++A +L  ++  + +
Sbjct: 334 NGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV T+  +I   C   D + A RLF EM + G  PD VT++ ++D LC  GK+ KA  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G   +T TYNT+IDG C   +I+ A ++F  M+  G   + +++NTLI+  C
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K +++A  L ++M+S+G++P  +TYN++     +   +++A  + + M  N    D  
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+GLCK+G    AL++ R +R         +YN ++  L
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611



 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 210/399 (52%), Gaps = 12/399 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   L +      + S++  + + G+ PD+ T + L+   C+  +V    ++L  + 
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 208

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDVFTYNTLINGLCRTGH 227
                P+  TFT+L++G   E  I   AAL  K R+    C     T N LING C+ G 
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSI--EAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 228 TIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              AL  + +E+A+G        +P+ +TYNT ++GLC+   V  A ++   M  E  +P
Sbjct: 267 VEDALGYIQQEIADG-------FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV TY  V+   C      EAK +  +M+D+G  PD+ TF+ ++  LC   ++++A  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +  +GV+P+ YT+N LI+  C       A +LF  M+++GC  D V+YNTLI+  C  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +AL L  +M S G   + +TYNT+  GL +  ++E A ++FD+M    ++ +  T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N  IDGLCK   + +A EL   +     + N ++YN ++
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 29/362 (8%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V +  L+  L   S++    +++++      +PDV T+NTL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 236 EEMA---------------NGNGEFGVV--------------CKPNTVTYNTIIDGLCKE 266
           EEM+                G  E G +              C    VT N +I+G CK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V+ A     +   +   PD +TY + + G C  +    A ++   M+ +G  PDV T+
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++++ LCKNG++++A  +L  M+ RG  P+  T+NTLI   C  ++++ A  L   +  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV ++N LIN  CK  D   AL L+ EM + G  P  VTYNTL   L  + ++ +
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL L  +M        T TYN  IDGLCK   + EA E+F  +       N +++N LID
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 507 GL 508
           GL
Sbjct: 505 GL 506



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 6/304 (1%)

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +F  + D   YN L+N L       +  +++ EM    G  G+  KP+ VT+NT++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +   V  A  +  +M    + PD  T+T++++GF        A R+   M++ G     V
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T +V+++  CK G+++ A   ++  I  G  P+  TYNT ++G C  D + HA K+   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   DV +YN ++N  CKN  +EEA  + ++M+ +G  P + T+NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E AL L  ++    V+ D YT+N  I+ LCK G    AL LF  +++S    + V+YN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 505 IDGL 508
           ID L
Sbjct: 433 IDNL 436



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 7/250 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++N +   L K    +    +F +++  G+  +  T + LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ +++     PN +T+ S++   C +  I +AA +         E DV TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T VAL +   M           +P    YN ++  L +   +  A  LF +M +  
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 284 INPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             PD +TY  V RG C       EA    +EM+D+G  P+  +F ++ + L   G  D  
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 691

Query: 343 SRLLELMIWR 352
            R +E+++ +
Sbjct: 692 IRAIEIIMEK 701


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/406 (35%), Positives = 211/406 (51%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N     L +N H    L +   +   G  PD++T++I++NC CK G++     +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L +++ R C  P+  TF +LI  LC  +R+ EA  L  +  V    PDV+T+N LIN LC
Sbjct: 344 LNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   +AL LFEEM N        C P+ VTYNT+ID LC  G + KA +L   M+   
Sbjct: 403 KVGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                +TY ++I G C      EA+ +F +M  QG+  + +TF+ ++D LCK+ K+D A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  MI  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK    + AL +   M  KG++PT   YN +   LF  + +  AL LF EM       D 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY     GLC+ G  + EA +    + D  +     S+  L +GL
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 210/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L +     T + + + ++S G+ PD  T + L+  F + G +     V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+L    +   VT   LI G C   R+ +A     +      EPD  TYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL + + M     +      P+  TYN +++ LCK G +++AK +  +M D   
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+ ++I   C  N   EA  L  ++  +GV PDV TF+++++ LCK G    A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYNTLID  C   K+  A  L   MES GC    ++YNT+I+  C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M    +  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++   +  + +E+++V+Y  LI+GL
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F  L     +    +  L +  R+   G      T ++LIN +CK+GRV      
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + + +   F P+ +T+ + + GLC    +  A  +         +PDVFTYN ++N LC+
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  +M +        C P+  T+NT+I  LC    +++A +L  ++  + +
Sbjct: 334 NGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV T+  +I   C   D + A RLF EM + G  PD VT++ ++D LC  GK+ KA  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G   +T TYNT+IDG C   +I+ A ++F  M+  G   + +++NTLI+  C
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K +++A  L ++M+S+G++P  +TYN++     +   +++A  + + M  N    D  
Sbjct: 508 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+GLCK+G    AL++ R +R         +YN ++  L
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 210/399 (52%), Gaps = 12/399 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   L +      + S++  + + G+ PD+ T + L+   C+  +V    ++L  + 
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMS 208

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDVFTYNTLINGLCRTGH 227
                P+  TFT+L++G   E  I   AAL  K R+    C     T N LING C+ G 
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSI--EAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 228 TIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              AL  + +E+A+G        +P+ +TYNT ++GLC+   V  A ++   M  E  +P
Sbjct: 267 VEDALGYIQQEIADG-------FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV TY  V+   C      EAK +  +M+D+G  PD+ TF+ ++  LC   ++++A  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +  +GV+P+ YT+N LI+  C       A +LF  M+++GC  D V+YNTLI+  C  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +AL L  +M S G   + +TYNT+  GL +  ++E A ++FD+M    ++ +  T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N  IDGLCK   + +A EL   +     + N ++YN ++
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 29/362 (8%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V +  L+  L   S++    +++++      +PDV T+NTL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204

Query: 236 EEMA---------------NGNGEFGVV--------------CKPNTVTYNTIIDGLCKE 266
           EEM+                G  E G +              C    VT N +I+G CK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V+ A     +   +   PD +TY + + G C  +    A ++   M+ +G  PDV T+
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++++ LCKNG++++A  +L  M+ RG  P+  T+NTLI   C  ++++ A  L   +  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV ++N LIN  CK  D   AL L+ EM + G  P  VTYNTL   L  + ++ +
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL L  +M        T TYN  IDGLCK   + EA E+F  +       N +++N LID
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 507 GL 508
           GL
Sbjct: 505 GL 506



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 6/304 (1%)

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +F  + D   YN L+N L       +  +++ EM    G  G+  KP+ VT+NT++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +   V  A  +  +M    + PD  T+T++++GF        A R+   M++ G     V
Sbjct: 193 RAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T +V+++  CK G+++ A   ++  I  G  P+  TYNT ++G C  D + HA K+   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   DV +YN ++N  CKN  +EEA  + ++M+ +G  P + T+NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E AL L  ++    V+ D YT+N  I+ LCK G    AL LF  +++S    + V+YN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 505 IDGL 508
           ID L
Sbjct: 433 IDNL 436



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 7/250 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++N +   L K    +    +F +++  G+  +  T + LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ +++     PN +T+ S++   C +  I +AA +         E DV TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T VAL +   M           +P    YN ++  L +   +  A  LF +M +  
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 284 INPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             PD +TY  V RG C       EA    +EM+D+G  P+  +F ++ + L   G  D  
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 691

Query: 343 SRLLELMIWR 352
            R +E+++ +
Sbjct: 692 IRAIEIIMEK 701


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 222/440 (50%), Gaps = 42/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS------------------ 146
           P VS+FN+L   L +       + + + + S GL PD  T +                  
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 147 -----------------ILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLC 188
                            ++++ FCK GRV      +  +  +  F P+  TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               +  A  +         +PDV+TYN++I+GLC+ G    A+   ++M   +      
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD------ 360

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C PNTVTYNT+I  LCKE  V++A EL   +  + I PDV T+ S+I+G C   +   A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            LF EM  +G +PD  T+++++D LC  GK+D+A  +L+ M   G   +  TYNTLIDG+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  +KI  A ++F  ME +G   + V+YNTLI+  CK++ VE+A  L  +M+ +G KP  
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TYN+L         +++A  +   M  N    D  TY   I GLCK+G V  A +L R+
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I+     L   +YN +I GL
Sbjct: 601 IQMKGIALTPHAYNPVIQGL 620



 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 215/406 (52%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L   L K  H    + +   +   G  PD+YT++ +I+  CK+G V      
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++    +PN VT+ +LI  LC E+++ EA  L          PDV T+N+LI GLC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +  VA+ LFEEM +        C+P+  TYN +ID LC +G +D+A  +  +M+    
Sbjct: 413 TRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              V+TY ++I GFC AN   EA+ +F EM   GV  + VT++ ++D LCK+ +++ AS+
Sbjct: 467 ARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQ 526

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ MI  G  P+ +TYN+L+  +C    I  A  +  +M SNGC  D+V+Y TLI+  C
Sbjct: 527 LMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADT 463
           K   VE A  L   +  KGI  T   YN +  GLF   +   A+ LF EM  +N  A D 
Sbjct: 587 KAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDA 646

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +Y     GLC  G  + EA++    + +  +     S   L +GL
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 219/418 (52%), Gaps = 5/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E L +  +M+      P    +N +   L    +   V     +++  G+ PD+ T ++
Sbjct: 135 DEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNV 194

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+  ++    ++L  +      P+  TFT++++G   E  +  A  +  +   F 
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFG 254

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C     + N +++G C+ G    ALN  +EM+N +G F     P+  T+NT+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+   M  E  +PDV TY SVI G C   +  EA     +M+ +   P+ VT++
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYN 369

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK  ++++A+ L  ++  +G+ P+  T+N+LI G CLT     A +LF  M S 
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D  +YN LI+  C    ++EAL++  +M   G   +V+TYNTL  G  + +++  A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREA 489

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            ++FDEM  + V+ ++ TYN  IDGLCKS  V +A +L   +     + +  +YN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 164/344 (47%), Gaps = 17/344 (4%)

Query: 174 TPNAVTFTS----LIKGLCAESRIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRTG 226
           +PN+   +S    L+  L +++    A  LF   +K   F+ EP +  Y  ++  L R+G
Sbjct: 40  SPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPAL--YEEILLRLGRSG 97

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-NIN 285
                  + E+M N   E G      T  +  +I+   +    D+   +   M D+  + 
Sbjct: 98  SFDDMRKILEDMKNSGCEMG------TSPFLILIESYAQFELQDEILGVVHWMIDDFGLK 151

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PD   Y  ++      N+    +    +M   G++PDV TF+V++  LC+  ++  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           LE M   G+ P+  T+ T++ GY     +D A ++   M   GC    VS N +++ +CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 406 NKDVEEALSLYSEMLSK-GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              VE+AL+   EM ++ G  P   T+NTL  GL +   V+ A+++ D M +     D Y
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ I GLCK G V EA+E    +       N V+YN LI  L
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTL 375


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/406 (35%), Positives = 211/406 (51%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N     L +N H    L +   +   G  PD++T++I++NC CK G++     +
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 251

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L +++ R C  P+  TF +LI  LC  +R+ EA  L  +  V    PDV+T+N LIN LC
Sbjct: 252 LNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 310

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   +AL LFEEM N        C P+ VTYNT+ID LC  G + KA +L   M+   
Sbjct: 311 KVGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                +TY ++I G C      EA+ +F +M  QG+  + +TF+ ++D LCK+ K+D A 
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  MI  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  
Sbjct: 425 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK    + AL +   M  KG++PT   YN +   LF  + +  AL LF EM       D 
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY     GLC+ G  + EA +    + D  +     S+  L +GL
Sbjct: 545 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 210/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L +     T + + + ++S G+ PD  T + L+  F + G +     V
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+L    +   VT   LI G C   R+ +A     +      EPD  TYNT +NGLC+
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL + + M     +      P+  TYN +++ LCK G +++AK +  +M D   
Sbjct: 207 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+ ++I   C  N   EA  L  ++  +GV PDV TF+++++ LCK G    A R
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 320

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYNTLID  C   K+  A  L   MES GC    ++YNT+I+  C
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M    +  +  
Sbjct: 381 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++   +  + +E+++V+Y  LI+GL
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F  L     +    +  L +  R+   G      T ++LIN +CK+GRV      
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 181

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + + +   F P+ +T+ + + GLC    +  A  +         +PDVFTYN ++N LC+
Sbjct: 182 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 241

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  +M +        C P+  T+NT+I  LC    +++A +L  ++  + +
Sbjct: 242 NGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 295

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV T+  +I   C   D + A RLF EM + G  PD VT++ ++D LC  GK+ KA  
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G   +T TYNT+IDG C   +I+ A ++F  M+  G   + +++NTLI+  C
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 415

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K +++A  L ++M+S+G++P  +TYN++     +   +++A  + + M  N    D  
Sbjct: 416 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+GLCK+G    AL++ R +R         +YN ++  L
Sbjct: 476 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 519



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 210/399 (52%), Gaps = 12/399 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   L +      + S++  + + G+ PD+ T + L+   C+  +V    ++L  + 
Sbjct: 57  YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 116

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDVFTYNTLINGLCRTGH 227
                P+  TFT+L++G   E  I   AAL  K R+    C     T N LING C+ G 
Sbjct: 117 SRGVAPDETTFTTLMQGFVEEGSI--EAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 174

Query: 228 TIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              AL  + +E+A+G        +P+ +TYNT ++GLC+   V  A ++   M  E  +P
Sbjct: 175 VEDALGYIQQEIADG-------FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV TY  V+   C      EAK +  +M+D+G  PD+ TF+ ++  LC   ++++A  L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +  +GV+P+ YT+N LI+  C       A +LF  M+++GC  D V+YNTLI+  C  
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +AL L  +M S G   + +TYNT+  GL +  ++E A ++FD+M    ++ +  T+
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N  IDGLCK   + +A EL   +     + N ++YN ++
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 29/362 (8%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V +  L+  L   S++    +++++      +PDV T+NTL+  LCR      A+ + 
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 236 EEMA---------------NGNGEFGVV--------------CKPNTVTYNTIIDGLCKE 266
           EEM+                G  E G +              C    VT N +I+G CK 
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V+ A     +   +   PD +TY + + G C  +    A ++   M+ +G  PDV T+
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 232

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++++ LCKNG++++A  +L  M+ RG  P+  T+NTLI   C  ++++ A  L   +  
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV ++N LIN  CK  D   AL L+ EM + G  P  VTYNTL   L  + ++ +
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL L  +M        T TYN  IDGLCK   + EA E+F  +       N +++N LID
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412

Query: 507 GL 508
           GL
Sbjct: 413 GL 414



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 6/304 (1%)

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +F  + D   YN L+N L       +  +++ EM    G  G+  KP+ VT+NT++  LC
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 100

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +   V  A  +  +M    + PD  T+T++++GF        A R+   M++ G     V
Sbjct: 101 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 160

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T +V+++  CK G+++ A   ++  I  G  P+  TYNT ++G C  D + HA K+   M
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   DV +YN ++N  CKN  +EEA  + ++M+ +G  P + T+NTL   L   +++
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E AL L  ++    V+ D YT+N  I+ LCK G    AL LF  +++S    + V+YN L
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 505 IDGL 508
           ID L
Sbjct: 341 IDNL 344



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 7/250 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++N +   L K    +    +F +++  G+  +  T + LI+  CK  ++   F 
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ +++     PN +T+ S++   C +  I +AA +         E DV TY TLINGLC
Sbjct: 426 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T VAL +   M           +P    YN ++  L +   +  A  LF +M +  
Sbjct: 486 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539

Query: 284 INPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             PD +TY  V RG C       EA    +EM+D+G  P+  +F ++ + L   G  D  
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 599

Query: 343 SRLLELMIWR 352
            R +E+++ +
Sbjct: 600 IRAIEIIMEK 609


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 143/406 (35%), Positives = 211/406 (51%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N     L +N H    L +   +   G  PD++T++I++NC CK G++     +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L +++ R C  P+  TF +LI  LC  +R+ EA  L  +  V    PDV+T+N LIN LC
Sbjct: 344 LNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 402

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   +AL LFEEM N        C P+ VTYNT+ID LC  G + KA +L   M+   
Sbjct: 403 KVGDPHLALRLFEEMKNSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                +TY ++I G C      EA+ +F +M  QG+  + +TF+ ++D LCK+ K+D A 
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  MI  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  
Sbjct: 517 GLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK    + AL +   M  KG++PT   YN +   LF  + +  AL LF EM       D 
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY     GLC+ G  + EA +    + D  +     S+  L +GL
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L +     T + + + ++S G+ PD  T + L+  F + G +     V
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+L    +   VT   LI G C   R+ +A     +      EPD  TYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             H   AL + + M     +      P+  TYN +++ LCK G +++AK +  +M D   
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+ ++I   C  N   EA  L  ++  +GV PDV TF+++++ LCK G    A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYNTLID  C   K+  A  L   MES GC    ++YNT+I+  C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A  L ++M    +  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++   +  + +E+++V+Y  LI+GL
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F  L     +    +  L +  R+   G      T ++LIN +CK+GRV      
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + + +   F P+ +T+ + + GLC    +  A  +         +PDVFTYN ++N LC+
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  +M +        C P+  T+NT+I  LC    +++A +L  ++  + +
Sbjct: 334 NGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV T+  +I   C   D + A RLF EM + G  PD VT++ ++D LC  GK+ KA  
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 447

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G   +T TYNT+IDG C   +I+ A ++F  M+  G   + +++NTLI+  C
Sbjct: 448 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 507

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+K +++A  L ++M+S+G++P  +TYN++     +   +++A  + + M  N    D  
Sbjct: 508 KDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 567

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+GLCK+G    AL++ R +R         +YN ++  L
Sbjct: 568 TYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 177/362 (48%), Gaps = 29/362 (8%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V +  L+  L   S++    +++++      +PDV T+NTL+  LCR      A+ + 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 236 EEMA---------------NGNGEFGVV--------------CKPNTVTYNTIIDGLCKE 266
           EEM+                G  E G +              C    VT N +I+G CK 
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V+ A     +   +   PD +TY + + G C  +    A ++   M+ +G  PDV T+
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++++ LCKNG++++A  +L  M+ RG  P+  T+NTLI   C  ++++ A  L   +  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV ++N LIN  CK  D   AL L+ EM + G  P  VTYNTL   L  + ++ +
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL L  +M        T TYN  IDGLCK   + EA E+F  +       N +++N LID
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 507 GL 508
           GL
Sbjct: 505 GL 506



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 6/304 (1%)

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +F  + D   YN L+N L       +  +++ EM    G  G+  KP+ VT+NT++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +   V  A  +  +M    + PD  T+T++++GF        A R+   M++ G     V
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T +V+++  CK G+++ A   ++  I  G  P+  TYNT ++G C  D + HA K+   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   DV +YN ++N  CKN  +EEA  + ++M+ +G  P + T+NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E AL L  ++    V+ D YT+N  I+ LCK G    AL LF  +++S    + V+YN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 505 IDGL 508
           ID L
Sbjct: 433 IDNL 436



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 7/250 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++N +   L K    +    +F +++  G+  +  T + LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ +++     PN +T+ S++   C +  I +AA +         E DV TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T VAL +   M           +P    YN ++  L +   +  A  LF +M +  
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 284 INPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             PD +TY  V RG C       EA    +EM+D+G  P+  +F ++ + L   G  D  
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 691

Query: 343 SRLLELMIWR 352
            R +E+++ +
Sbjct: 692 IRAIEIIMEK 701


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/440 (32%), Positives = 222/440 (50%), Gaps = 42/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS------------------ 146
           P VS+FN+L   L +       + + + + S GL PD  T +                  
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246

Query: 147 -----------------ILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLC 188
                            ++++ FCK GRV      +  +  +  F P+  TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               +  A  +         +PDV+TYN++I+GLC+ G    A+ + ++M   +      
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C PNTVTYNT+I  LCKE  V++A EL   +  + I PDV T+ S+I+G C   +   A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            LF EM  +G +PD  T+++++D LC  GK+D+A  +L+ M   G   +  TYNTLIDG+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  +K   A ++F  ME +G   + V+YNTLI+  CK++ VE+A  L  +M+ +G KP  
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TYN+L         +++A  +   M  N    D  TY   I GLCK+G V  A +L R+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I+     L   +YN +I GL
Sbjct: 601 IQMKGINLTPHAYNPVIQGL 620



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 215/406 (52%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L   L K  H    + +   +   G  PD+YT++ +I+  CK+G V     V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++    +PN VT+ +LI  LC E+++ EA  L          PDV T+N+LI GLC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +  VA+ LFEEM +        C+P+  TYN +ID LC +G +D+A  +  +M+    
Sbjct: 413 TRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              V+TY ++I GFC AN   EA+ +F EM   GV  + VT++ ++D LCK+ +++ A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ MI  G  P+ YTYN+L+  +C    I  A  +  +M SNGC  D+V+Y TLI+  C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADT 463
           K   VE A  L   +  KGI  T   YN +  GLF   +   A+ LF EM  +N    D 
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +Y     GLC  G  + EA++    + +  +     S   L +GL
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 219/418 (52%), Gaps = 5/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E L + D+M+      P    +N +   L        V     +++  G+ PD+ T ++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+  ++    ++L  +      P+  TFT++++G   E  +  A  +  +   F 
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C     + N +++G C+ G    ALN  +EM+N +G F     P+  T+NT+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+   M  E  +PDV TY SVI G C   +  EA  +  +M+ +   P+ VT++
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK  ++++A+ L  ++  +G+ P+  T+N+LI G CLT     A +LF  M S 
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D  +YN LI+  C    ++EAL++  +M   G   +V+TYNTL  G  + ++   A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            ++FDEM  + V+ ++ TYN  IDGLCKS  V +A +L   +     + +  +YN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 10/312 (3%)

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L +K   F+ EP +  Y  ++  L R+G       + E+M +   E G      T T+  
Sbjct: 72  LASKKPNFSPEPAL--YEEILLRLGRSGSFDDMKKILEDMKSSRCEMG------TSTFLI 123

Query: 259 IIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           +I+   +    D+   +   M DE  + PD   Y  ++      N     +    +M   
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G++PDV TF+V++  LC+  ++  A  +LE M   G+ P+  T+ T++ GY     +D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFL 436
            ++   M   GC    VS N +++ +CK   VE+AL+   EM ++ G  P   T+NTL  
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +   V+ A+++ D M +     D YTYN+ I GLCK G V EA+E+   +       
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 497 NIVSYNCLIDGL 508
           N V+YN LI  L
Sbjct: 364 NTVTYNTLISTL 375


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 131/380 (34%), Positives = 221/380 (58%), Gaps = 6/380 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + + N+L   L K   ++ +  +++ + S GL P + T   LI+  C+ G +     +  
Sbjct: 147 IQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFD 206

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P  + +T LI+GLC++++I EA ++    R     P+V+TYNTL++G C+  
Sbjct: 207 EMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLA 266

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   AL L+++M    GE G+V  P+ VT+  +IDGLCK G +  A+ LF+ M   ++ P
Sbjct: 267 NAKQALRLYQDML---GE-GLV--PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP 320

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++  Y S+I  +C   D +EA  LF+E+    V PDV T+S+++  LC   + ++A  + 
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M   G+  N+ TYN+LIDG C   K+D A ++   M  NG   +V++++TLI+ YCK 
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           ++++ A+ +YSEM+ K + P VVTY  +  G  +   ++ ALKL+ +M  N +  + YT 
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500

Query: 467 NNFIDGLCKSGFVLEALELF 486
           +  +DGLCK G + +ALELF
Sbjct: 501 SCLLDGLCKDGKISDALELF 520



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 206/391 (52%), Gaps = 21/391 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K  +    L L++ +   GL PD+ T  ILI+  CK G +     +
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL 309

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++   TPN   + SLI   C    + EA ALF +   F   PDVFTY+ LI GLC 
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              T  A N+FE+M       G++   N+VTYN++IDG CKEG +DKA E+  +M +  +
Sbjct: 370 VSRTEEAGNIFEKMTKE----GIL--ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+T++++I G+C   +   A  ++ EM+ + + PDVVT++ ++D  CK G M +A +
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF---VSMESNGCMHDV-------- 393
           L   M+  G+ PN YT + L+DG C   KI  A +LF   +  ++  C  D         
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543

Query: 394 --VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
             V+Y  LI+  C++    +A+ L+S+M   G++P  V Y  +  GLF++  +   + L 
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLH 601

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            +M +  V  ++  +    +   +SGF+  A
Sbjct: 602 ADMLKFGVIPNSAVHVILCECYQESGFLKSA 632



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 198/347 (57%), Gaps = 11/347 (3%)

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            F  L R+  S FTPN   +  LI  LC    + EA +++  H+V A    +   N L+ 
Sbjct: 101 AFSELSRLKSSKFTPN--VYGELIIVLCKMELVEEALSMY--HKVGAA-LTIQACNVLLY 155

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            L +TG   +   ++EEM + NG       P+ +T+ T+IDG C++G + +A+E+F +M+
Sbjct: 156 VLVKTGRFELLWRIYEEMIS-NG-----LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMR 209

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            + I P V+ YT +IRG C  N   EA+ +   M + GV P+V T++ +MD  CK     
Sbjct: 210 VKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAK 269

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A RL + M+  G+ P+  T+  LIDG C   ++  AR LFV+M       ++  YN+LI
Sbjct: 270 QALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           + YCK  DV EA++L+ E+    + P V TY+ L  GL  + + E A  +F++M +  + 
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A++ TYN+ IDG CK G + +ALE+   + ++  E N+++++ LIDG
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDG 436



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           KM+     L +    G        N L+     T + +   +++  M SNG    V+++ 
Sbjct: 127 KMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFG 186

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TLI+  C+  D+  A  ++ EM  KGI PTV+ Y  L  GL   +++E A  +   MR  
Sbjct: 187 TLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV 246

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V  + YTYN  +DG CK     +AL L++ +       ++V++  LIDGL
Sbjct: 247 GVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGL 297


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 138/421 (32%), Positives = 223/421 (52%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  +F  M+     P   +   ++ G L+  K +  V+ + + +++ GL PD YT+  
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK-WKEVVQMLEEMSARGLKPDCYTYGS 309

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  CK GR          ++R    P   T+  LI G   +  + E  +         
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N   +   + G    A+++F +M     + G+   PN V Y  +ID LCK G
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR----QHGL--SPNVVNYGALIDALCKLG 423

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A+  F +M +E + P++V + S++ G C  + W  A+ L  EM+DQG+ P+ V F+
Sbjct: 424 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 483

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC  G++ +  RL++LM   GV P+ ++Y  LI GYCLT + D A K+F  M S 
Sbjct: 484 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSI 543

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G     V+YNTL++ YC    +++A  L+ EML KG+ P VVTYNT+  GLF+  +   A
Sbjct: 544 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 603

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M  +    D YTYN  ++GLCKS  V EA ++F+++     +LNI+++  +I  
Sbjct: 604 KELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 663

Query: 508 L 508
           L
Sbjct: 664 L 664



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/450 (32%), Positives = 233/450 (51%), Gaps = 17/450 (3%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK---H 122
           L++ + ER +S   G       ++AL +FD +L  H  P  V +FN L   +++ +    
Sbjct: 15  LERIIAERARSRSLG------LDDALKLFDELLH-HARPASVRAFNHLLTAVSRARCSSA 67

Query: 123 YDTVLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
            +  +S F R+    S  + P++ T+SILI  FC+MG + HGF   G IL++ +  + + 
Sbjct: 68  SELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIA 127

Query: 180 FTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
              L+KGLC   R+ EA   L  +     C PD  +Y  L+ GLC       AL L   M
Sbjct: 128 INQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMM 187

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
           A+ +G     C PN V+Y+ +I+G   EG VDK   LFL+M D  I PDVVTYT+VI G 
Sbjct: 188 ADDHGR---RCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGL 244

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A  ++ A+ +F +M+D G +P+  T++ ++      GK  +  ++LE M  RG+ P+ 
Sbjct: 245 CKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDC 304

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           YTY +L++  C   +   AR  F SM   G    V +Y  LI+ Y     + E  S    
Sbjct: 305 YTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDL 364

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+  G+ P    +N  F    +   +++A+ +F++MR++ ++ +   Y   ID LCK G 
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V +A   F  + +     NIV +N L+ GL
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGL 454



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 6/378 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FNI F   AK    D  + +F ++   GL P++  +  LI+  CK+GRV    V 
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++    TPN V F SL+ GLC   +   A  L  +       P+   +NTLI  LC 
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 491

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  +    L + M +      V  +P+  +Y  +I G C  G  D+A+++F  M    +
Sbjct: 492 VGRVMEGRRLIDLMEH------VGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P  VTY +++ G+C A+  ++A  LF EM+ +GV P VVT++ I+  L +  +  +A  
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI  G   + YTYN +++G C ++ +D A K+F S+ S G   +++++  +I    
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    E+A+ L++ + + G+ P VVTY  +   L E   +E    LF  M +N  A ++ 
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 725

Query: 465 TYNNFIDGLCKSGFVLEA 482
             N  +  L   G +  A
Sbjct: 726 MLNALVRRLLHRGDISRA 743



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 203/417 (48%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   FD M+R     P VS++ IL    A       + S    +   GL PD +  +I 
Sbjct: 322 EARFFFDSMIR-KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            + + K G +     +  ++ +   +PN V + +LI  LC   R+ +A   F +      
Sbjct: 381 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 440

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++  +N+L+ GLC       A  L  EM +       +C PN V +NT+I  LC  G 
Sbjct: 441 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG-----IC-PNAVFFNTLICNLCNVGR 494

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V + + L   M+   + PD  +YT +I G+C     +EA+++F  M+  G+ P  VT++ 
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C   ++D A  L   M+ +GV P   TYNT++ G   T +   A++L+++M ++G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +YN ++N  CK+  V+EA  ++  + SKG++  ++T+  +   L +  + E A+
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  +  N +  +  TY    + L + G + E   LF A+  +    N    N L+
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALV 731



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 6/276 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+  L          D    +F  + S GL P   T++ L++ +C   R+   + +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR   TP  VT+ +++ GL    R  EA  L+        + D++TYN ++NGLC+
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     A  +F+ + +   +       N +T+  +I  L K G  + A +LF  +    +
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQL------NIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 685

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY  V           E   LF  M   G  P+    + ++  L   G + +A  
Sbjct: 686 VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA 745

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            L  +  R  +    T + L+  +   +   HA+ L
Sbjct: 746 YLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/419 (35%), Positives = 218/419 (52%), Gaps = 12/419 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + + M  M    P V +FN +   L +         L  R+   G   D  T+  
Sbjct: 257 SEALQLLEDMFLMC-CEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  C+MG+V     +L +I      PN V + +LI G  A  R  EA  L   + V A
Sbjct: 316 LMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371

Query: 208 C-EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             EPD +T+N +I+GL + G+ + AL L  EM     E      PN +TY  +I+G CK+
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE------PNVITYTILINGFCKQ 425

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A E+   M  + ++ + V Y  +I   C   +  EA +LF EM  +G +PD+ TF
Sbjct: 426 GRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTF 485

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + +++ LCKN KM++A  L   M   GV  NT TYNTL+  + + D I  A KL   M  
Sbjct: 486 NSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLF 545

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  D ++YN LI   CK   VE+ L L+ EML KGI PT+++ N L  GL    +V  
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVND 605

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           ALK   +M    +  D  TYN+ I+GLCK G V EA  LF  ++      + ++YN LI
Sbjct: 606 ALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 29/330 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FNI+   L K  +  + L L   + +    P++ T++ILIN FCK GR+     +
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +     + N V +  LI  LC +  I EA  LF +     C+PD++T+N+LINGLC+
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 494

Query: 225 TGHTIVALNLFEEM------ANG----------------NGEFGVV-------CKPNTVT 255
                 AL+L+ +M      AN                    F +V       C  + +T
Sbjct: 495 NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNIT 554

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I  LCK G V+K   LF +M  + I P +++   +I G C     N+A +   +M+
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+ PD+VT++ +++ LCK G + +AS L   +   G+ P+  TYNTLI  +C     +
Sbjct: 615 HRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            A  L      +G + + V+++ LIN+  K
Sbjct: 675 DACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 5/260 (1%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P   +YN ++D L        A  +F  M    ++P V T+  V++  C  ++ + A 
Sbjct: 166 CDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSAC 225

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M   G  P+ V +  ++  LC+N ++ +A +LLE M      P+  T+N +I G 
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   +I  A KL   M   G   D ++Y  L++  C+   V+EA +L    L+K   P  
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL----LNKIPNPNT 341

Query: 429 VTYNTLFLGLFEIHQVERALK-LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V YNTL  G     + E A   L++ M       D YT+N  IDGL K G+++ ALEL  
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +   ++E N+++Y  LI+G
Sbjct: 402 EMVAKRFEPNVITYTILING 421



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 5/250 (2%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-Q 317
           +ID L   G     ++L  +MKDE +      +  +++ +  A    +A RL ++M    
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
              P   +++V++D L        A  +   M+ RGV+P  YT+  ++   C+  ++D A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             L   M  +GC+ + V Y TLI+  C+N  V EAL L  +M     +P V T+N +  G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L    ++  A KL D M     + D  TY   + GLC+ G V EA  L   I +     N
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP----N 340

Query: 498 IVSYNCLIDG 507
            V YN LI G
Sbjct: 341 TVLYNTLISG 350


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 142/434 (32%), Positives = 224/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K +  D  + +   +  +G+ PD  T++ +++ FC  G+     V 
Sbjct: 121 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF 180

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 181 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYAT 240

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VC-----------------------KPNTV 254
            G  +    L + M   NG       F + VC                        PN V
Sbjct: 241 KGALVEMHGLLDLMVR-NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 299

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY  +I  LCK G V+ A   F +M DE ++P  + Y S+I G C  N W  A+ L +EM
Sbjct: 300 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 359

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+G+  + + F+ I+D  CK G++ ++ +L +LM+  GV P+  TY+TLIDGYCL  K+
Sbjct: 360 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 419

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL  SM S G   D V+Y+TLIN YCK   +++AL L+ EM S G+ P ++TYN +
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNII 479

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  + ++    +  TYN  + GLCK+    +AL +F+ +     
Sbjct: 480 LQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 539

Query: 495 ELNIVSYNCLIDGL 508
           +L   ++N +ID L
Sbjct: 540 KLEARTFNIMIDAL 553



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 216/433 (49%), Gaps = 14/433 (3%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           SSGQ       P EA+ +F   +R     P V ++N L   L KN        +F  +  
Sbjct: 170 SSGQ-------PKEAI-VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            GL P+I T+  L+  +   G +     +L  ++R+   PN   F+ L+     + ++ E
Sbjct: 222 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEE 281

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  +F+K R     P+  TY  +I  LC++G    A+  FE+M +          P  + 
Sbjct: 282 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG------LSPGNIV 335

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I GLC     ++A+EL L+M D  I  + + + S+I   C      E+++LF  M+
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             GV+PD++T+S ++D  C  GKMD+A++LL  M+  G+ P+  TY+TLI+GYC   ++ 
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN + 
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIIL 515

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +    + AL++F  +    +  +  T+N  ID L K G   EA +LF A   +   
Sbjct: 516 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 575

Query: 496 LNIVSYNCLIDGL 508
            N  +Y  + + +
Sbjct: 576 PNYWTYRLMAENI 588



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 188/373 (50%), Gaps = 49/373 (13%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-----CEPDVFTYNTLINGLCRTGHTI 229
           P+  ++  L+ GLC E+R  EA  L     + A     C PDV +Y+T+ING  + G   
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELL---HIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
              + + EM +          PN VTYN+II  LCK   VDKA E+   M    + PD +
Sbjct: 106 KTYSTYNEMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 159

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR----- 344
           TY S++ GFC +    EA     +M   GV+PDVVT++ +MD LCKNG+  +A +     
Sbjct: 160 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 219

Query: 345 ------------------------------LLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
                                         LL+LM+  G++PN Y ++ L+  Y   +K+
Sbjct: 220 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 279

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  +F  M   G   + V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + YN+L
Sbjct: 280 EEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 339

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL   ++ ERA +L  EM    +  +T  +N+ ID  CK G V+E+ +LF  +     
Sbjct: 340 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399

Query: 495 ELNIVSYNCLIDG 507
           + +I++Y+ LIDG
Sbjct: 400 KPDIITYSTLIDG 412



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 7/404 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M +     P ++++  L    A       +  L   +   G+ P+ Y  SIL
Sbjct: 211 EARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  + K  +V    +V  ++ +    PNAVT+ ++I  LC   R+ +A   F +      
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P    YN+LI+GLC       A  L  EM +       +C  NT+ +N+IID  CKEG 
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGR 383

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V ++++LF  M    + PD++TY+++I G+C A   +EA +L   M+  G++PD VT+S 
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  CK  +M  A  L   M   GV+P+  TYN ++ G   T +   A++L+V +  +G
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++ +YN +++  CKNK  ++AL ++  +    +K    T+N +   L ++ + + A 
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            LF     N +  + +TY    + +   G + E  +LF ++ D+
Sbjct: 564 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 607



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 4/299 (1%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDVF+YN L+NGLC    +  AL L   MA+  G+    C P+ V+Y+T+I+G  KEG +
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVVSYSTVINGFFKEGDL 104

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DK    + +M D+ I+P+VVTY S+I   C A   ++A  +   M+  GV PD +T++ I
Sbjct: 105 DKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 164

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM   G 
Sbjct: 165 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 224

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +VE A+ 
Sbjct: 225 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 284

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F +MR+  +  +  TY   I  LCKSG V +A+  F  + D       + YN LI GL
Sbjct: 285 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 343



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 193/420 (45%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK +  +  + +F ++   GL P+  T+  +I 
Sbjct: 250 LLDLMVRNGIHPNH---YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIG 306

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV    +   +++    +P  + + SLI GLC  ++   A  L  +        
Sbjct: 307 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 366

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 420

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + PD VTY+++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 421 EATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIIL 480

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C     D A ++F     N C+
Sbjct: 481 QGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMF----QNLCL 536

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I+   K    +EA  L+    S G+ P   TY  +   +     +E 
Sbjct: 537 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 596

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +LF  M  N    D+   N  +  L + G +  A      I +  + L   + +  ID
Sbjct: 597 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 656



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 39/287 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +FD M+R+   P  ++   ++ G CLA     D    L   + S G+ PD  T+S LIN 
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGK--MDEATKLLASMVSVGMKPDCVTYSTLING 447

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +CK+ R+    V+   +  S  +P+ +T+  +++GL    R   A  L+        + +
Sbjct: 448 YCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLE 507

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEM---------------------ANGNGEF----- 245
           + TYN +++GLC+   T  AL +F+ +                        N E      
Sbjct: 508 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 567

Query: 246 -----GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                G+V  PN  TY  + + +  +G +++  +LFL M+D     D      ++R    
Sbjct: 568 AFSSNGLV--PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 625

Query: 301 ANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLL 346
             +   A   ++ M+D+     +  T S+ +D L   GK  +  R L
Sbjct: 626 RGEITRAGT-YLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFL 670


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 226/421 (53%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + + M++    P  ++  +IL G  +  +  + +    K++ S G+ PD+ T+S+
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI-GFLKKMRSDGVEPDVVTYSL 306

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR      +   + +    P   T+ +L++G   +  ++E   L        
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD + ++ LI    + G    A+ +F +M            PN VTY  +I  LCK G
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPNAVTYGAVIGILCKSG 420

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A   F +M DE ++P  + Y S+I G C  N W  A+ L +EM+D+G+  + + F+
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+D  CK G++ ++ +L ELM+  GV PN  TYNTLI+GYCL  K+D A KL   M S 
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V+Y+TLIN YCK   +E+AL L+ EM S G+ P ++TYN +  GLF+  +   A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  +  +    +  TYN  + GLCK+    +AL++F+ +     +L   ++N +ID 
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 508 L 508
           L
Sbjct: 661 L 661



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 238/492 (48%), Gaps = 77/492 (15%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + PD+ T+
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTY 90

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI C C+ GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG--------------------- 243
              C P+VF+YN L+ GLC    +  AL L   MA+  G                     
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 244 -------------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
                        + G++  P+ VTYN+II  LCK   +DKA E+   M    + PD +T
Sbjct: 211 DSDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S++ G+C +    EA     +M   GV+PDVVT+S++MD LCKNG+  +A ++ + M 
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 351 WRGVNPNTYTYNTLIDGYC----------LTD-------------------------KID 375
            RG+ P   TY TL+ GY           L D                         K+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  +F  M   G   + V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + YN+L 
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL   ++ ERA +L  EM    +  +T  +N+ ID  CK G V+E+ +LF  +     +
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 496 LNIVSYNCLIDG 507
            N+++YN LI+G
Sbjct: 509 PNVITYNTLING 520



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 216/433 (49%), Gaps = 14/433 (3%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           SSGQ       P EA+     M R     P V ++++L   L KN        +F  +  
Sbjct: 278 SSGQ-------PKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            GL P+I T+  L+  +   G +     +L  ++R+   P+   F+ LI     + ++ +
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  +F+K R     P+  TY  +I  LC++G    A+  FE+M +          P  + 
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG------LSPGNIV 443

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I GLC     ++A+EL L+M D  I  + + + S+I   C      E+++LF  M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             GV+P+V+T++ +++  C  GKMD+A +LL  M+  G+ PNT TY+TLI+GYC   +++
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN + 
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +    + AL++F  +    +  +  T+N  ID L K G   EA +LF A   +   
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683

Query: 496 LNIVSYNCLIDGL 508
            N  +Y  + + +
Sbjct: 684 PNYWTYRLMAENI 696



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 206/404 (50%), Gaps = 7/404 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M +     P ++++  L    A       +  L   +   G+ PD Y  SIL
Sbjct: 319 EARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  + K G+V    +V  ++ +    PNAVT+ ++I  LC   R+ +A   F +      
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P    YN+LI+GLC       A  L  EM +       +C  NT+ +N+IID  CKEG 
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGR 491

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V ++++LF  M    + P+V+TY ++I G+C A   +EA +L   M+  G++P+ VT+S 
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  CK  +M+ A  L + M   GV+P+  TYN ++ G   T +   A++L+V +  +G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++ +YN +++  CKNK  ++AL ++  +    +K    T+N +   L ++ + + A 
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            LF     N +  + +TY    + +   G + E  +LF ++ D+
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 191/420 (45%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP       F+IL    AK    D  + +F ++   GL P+  T+  +I 
Sbjct: 358 LLDLMVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV    +   +++    +P  + + SLI GLC  ++   A  L  +        
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +   +N++I+  C+ G  I +  LFE M       GV  KPN +TYNT+I+G C  G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + P+ VTY+++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C     D A ++F     N C+
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLCL 644

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I+   K    +EA  L+    S G+ P   TY  +   +     +E 
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +LF  M  N    D+   N  +  L + G +  A      I +  + L   + +  ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 39/287 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +F+ M+R+   P  ++   ++ G CLA     D  + L   + S GL P+  T+S LIN 
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYSTLING 555

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +CK+ R+    V+   +  S  +P+ +T+  +++GL    R   A  L+ +      + +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEM---------------------ANGNGEF----- 245
           + TYN +++GLC+   T  AL +F+ +                        N E      
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675

Query: 246 -----GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                G+V  PN  TY  + + +  +G +++  +LFL M+D     D      ++R    
Sbjct: 676 AFSSNGLV--PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 301 ANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLL 346
             +   A   ++ M+D+     +  T S+ +D L   GK  +  R L
Sbjct: 734 RGEITRAGT-YLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 238/445 (53%), Gaps = 19/445 (4%)

Query: 73  RCKSSGQ---------GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           +CKSS             +NLI  N+AL I + + + +   P V S+N +   + + K  
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLI--NKALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQS 183

Query: 124 DTVL-SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
             +   +FK +  +G+ P++YT++ILI  FC  G +  G    G + R+   PN VT+ +
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNT 243

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           +I   C   +I EA  L     +    P++ +YN +INGLCR G       + EEM+   
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                   P+ VT+NT+I+G C  G   +A  L  +M    ++P+VVTYT++I   C A 
Sbjct: 304 ------YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAG 357

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           + N A     +M D+G+ P+  T++ ++D   + G + +A ++++ M+  G  P   TYN
Sbjct: 358 NLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI+G+C+  +++ A  L   M   G + DVVSY+T+I+ +C+N+++E+A  L  EM++K
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK 477

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           GI P V TY++L  GL +  ++     LF EM    +  D  TY + I+  C  G + +A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
           L L   +    +  +IV+YN LI+G
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLING 562



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 212/418 (50%), Gaps = 21/418 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K +       L + +   GL P++ +++++IN  C+ G++     +
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +  + P+ VTF +LI G C      +A  L  +       P+V TY TLIN +C+
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+   ++M +          PN  TY T+IDG  ++GF+ +A ++  +M +   
Sbjct: 356 AGNLNRAMEFLDQMRDRG------LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P ++TY ++I G C      +A  L  EM+++G  PDVV++S I+   C+N +++KA +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+ +G++P+  TY++LI G C   ++     LF  M S G   D V+Y +LIN YC
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              D+++AL L+ EM+ KG  P +VTYN L  G  +  + + A +L  ++       +  
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 465 TYNNFID---------------GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  ID               G C  G + EA  +  ++    Y+LN   YN +I G
Sbjct: 590 TYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 194/398 (48%), Gaps = 23/398 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L        ++   L L   +   GL P++ T++ LIN  CK G ++     
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      PN  T+T+LI G   +  + +A  +  +       P + TYN LING C 
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM     E G +  P+ V+Y+TII G C+   ++KA +L ++M  + I
Sbjct: 426 LGRMEDASGLLQEMI----ERGFI--PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV TY+S+I+G C      E   LF EM+  G+ PD VT++ +++  C  G +DKA R
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + MI +G +P+  TYN LI+G+    +   A++L + +     + + ++YNTLI+  C
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-C 598

Query: 405 KNKDVEEALSLY----------------SEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            N + + AL+L                   ML KG K     YN +  G  ++  +E+A 
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            L+ EM  +  A  + T       L   G  +E  +L 
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 209/422 (49%), Gaps = 34/422 (8%)

Query: 42  EPSYPTTTSKLKE-SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRM 100
           E     T+  L+E S R  V DR +    +   C        N+   ++AL +   M++ 
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC--------NVGNFHQALVLHAEMVKN 337

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
             SP  V ++  L   + K  + +  +    ++   GL P+  T++ LI+ F + G +  
Sbjct: 338 GLSPN-VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            + ++  ++ + FTP  +T+ +LI G C   R+ +A+ L  +       PDV +Y+T+I+
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 221 GLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           G CR      A  L  EM A G         P+  TY+++I GLCK+  + +  +LF +M
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKG-------ISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + PD VTYTS+I  +C   D ++A RL  EM+ +G  PD+VT++V+++   K  + 
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTDKIDHARKLFVSM 384
            +A RLL  +++    PN  TYNTLID               G+C+   ++ A ++  SM
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF-EIHQ 443
              G   +   YN +I+ + K  ++E+A +LY EML  G  P  VT   L   L+ E  +
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689

Query: 444 VE 445
           VE
Sbjct: 690 VE 691



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 1/216 (0%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK-ASRLLELMIWR 352
           V++     N  N+A  +       G  P V++++ I+D + +  +  K A  + + M+  
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+PN YTYN LI G+C    ++     F  ME NGC+ +VV+YNT+I+ YCK + + EA
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L   M  KG+ P +++YN +  GL    Q++   ++ +EM +     D  T+N  I+G
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C  G   +AL L   +  +    N+V+Y  LI+ +
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ +     +N+  +    L   + + G+ PD+ T+S LI   CK  R+     +
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+ VT+TSLI   C E  + +A  L  +       PD+ TYN LING  +
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID---------------GLCKEGFV 269
              T  A  L  ++     E  V   PN +TYNT+ID               G C +G +
Sbjct: 566 QSRTKEAKRLLLKLLY---EESV---PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLM 619

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A  +   M  +    +   Y  +I G     +  +A  L+ EM+  G  P  VT   +
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679

Query: 330 MDELCKNGKMDKASRLLE 347
              L   GK  + ++LL+
Sbjct: 680 AKSLYHEGKEVELNQLLD 697


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/411 (35%), Positives = 229/411 (55%), Gaps = 11/411 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H      S++N L     K  +    L++++ +  +GL PD YT ++L+N F K  RV  
Sbjct: 83  HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDS 142

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            + +   +     +PN +T++ LI  +C    + +A  +F   +   C P++FTY ++I+
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GL ++GH   A  LFEEM +     G+V     V YN++I GL + G  D A +LF +M 
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSE----GLVA--TRVVYNSLIHGLGRSGRADAAAKLFREML 256

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            + + PD VT+TS++ G   A   +EA+R+F E  D G   DV  ++V++D LCK+ ++D
Sbjct: 257 SKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLD 316

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  +   +   G+ P+ YT+N L+DG C + +I  A  L   M+  GC  DV  YNTLI
Sbjct: 317 EAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLI 376

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +   K+  VEEA  L  EM S G +P VVTYNTL     +  ++E AL+LF+E+      
Sbjct: 377 DGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF- 435

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIR----DSKYELNIVSYNCLIDG 507
           A+T TYN  ++GLC +G V EA +LF  ++    D   + + V+Y  L++G
Sbjct: 436 ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/436 (33%), Positives = 220/436 (50%), Gaps = 21/436 (4%)

Query: 55  SLRLTVKDRASLKKFLKERCKSSGQGDINLITP-------NEALCIFDYMLRMHPSPPPV 107
           S  L  K   +LK+    RC  +     +LI          +AL ++  M +     P  
Sbjct: 66  SAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQ-SGLRPDT 124

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-VVLG 166
            +FN+L     K K  D+V  LF+ + +    P++ T+SILI+  CK G V     V L 
Sbjct: 125 YTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLD 184

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
              R C  PN  T+TS+I GL     + +A  LF +            YN+LI+GL R+G
Sbjct: 185 MKSRGC-RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  LF EM +         +P+ VT+ +++ GL   G   +A+ +F + +D     
Sbjct: 244 RADAAAKLFREMLSKG------LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCAL 297

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV  Y  +I   C +   +EA  +F E+ + G+ PDV TF+ +MD LCK+G++  A  LL
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G  P+   YNTLIDG   + +++ A +L + M+S G   DVV+YNTLI+  CK 
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA----D 462
             +E+AL L+ E+ +KG   T VTYNT+  GL    +V+ A KLF+ M++  V      D
Sbjct: 418 GRIEDALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPD 476

Query: 463 TYTYNNFIDGLCKSGF 478
             TY   ++G  ++G 
Sbjct: 477 FVTYTTLLNGARQAGL 492



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 14/294 (4%)

Query: 229 IVALNLFEEMANGNGEFGVV--------------CKPNTVTYNTIIDGLCKEGFVDKAKE 274
           I+   +F E+A G    G++              C      YN++ID   K G+  KA  
Sbjct: 51  ILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALA 110

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           ++  M    + PD  T+  ++  F  A   +   +LF EM +Q   P+V+T+S+++D +C
Sbjct: 111 VYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G ++KA ++   M  RG  PN +TY ++IDG   +  +D A  LF  M S G +   V
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            YN+LI+   ++   + A  L+ EMLSKG++P  VT+ +L  GL    +   A ++F E 
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           R    A D   YN  ID LCKS  + EA E+F  + +     ++ ++N L+DGL
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGL 344



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 170/329 (51%), Gaps = 6/329 (1%)

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           F  L +G  +   + ++     +     C      YN+LI+   + G+T  AL ++  M 
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM- 115

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
              G+ G+  +P+T T+N +++   K   VD   +LF +M+++N +P+V+TY+ +I   C
Sbjct: 116 ---GQSGL--RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 +A ++F++M  +G +P++ T++ ++D L K+G +DKA  L E M   G+     
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            YN+LI G   + + D A KLF  M S G   D V++ +L+          EA  ++ E 
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G    V  YN L   L +  +++ A ++F E+  + +  D YT+N  +DGLCKSG +
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRI 350

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +A  L   ++ +    ++  YN LIDGL
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGL 379



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 12/263 (4%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
            + A  +F  ML     P  V+  ++++G L           +F+     G   D+  ++
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYG-LGVAGRASEARRIFQEARDVGCALDVNLYN 303

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI+  CK  R+   + + G +      P+  TF +L+ GLC   RI +A  L    +  
Sbjct: 304 VLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA 363

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDV  YNTLI+GL ++G    A  L  EM +   E      P+ VTYNT+ID  CK 
Sbjct: 364 GCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYE------PDVVTYNTLIDESCKG 417

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF----IEMMDQGVQPD 322
           G ++ A  LF ++  +    + VTY +++ G C A   +EA +LF     E +D  + PD
Sbjct: 418 GRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPD 476

Query: 323 VVTFSVIMDELCKNGKMDKASRL 345
            VT++ +++   + G  + A+ L
Sbjct: 477 FVTYTTLLNGARQAGLSELANSL 499


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 224/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ P+  T++ +++ +C  G+       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VCK-----------------------PNTV 254
            G  +    L + M   NG       F + +C                        P+TV
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T+I  LCK G V+ A   F +M DE ++P  + Y S+I   C  + W++AK L +EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+G+  D + F+ I+D  CK G++ ++ +L +LM+  GV P+  TY+TLIDGYCL  K+
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL  SM S G   D V+YNTLIN YCK   +E+AL L+ EM S G+ P ++TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  +  +    +  TYN  + GLCK+    EAL +F+ +  +  
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 495 ELNIVSYNCLIDGL 508
           +L   ++N +I  L
Sbjct: 651 QLETRTFNIMIGAL 664



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 219/424 (51%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P++ T+
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTY 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI   C  GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+ GLC    +  AL L + M +  G+    C P+ V+Y T+I+G  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFF 210

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +DKA   + +M D  I P+VVTY+S+I   C A   ++A  +   M+  GV P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +V
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR+  +  DT TY   I  LCKSG V +A+  F  + D +     + YN L
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 505 IDGL 508
           I  L
Sbjct: 451 IHSL 454



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 222/435 (51%), Gaps = 18/435 (4%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           SSGQ       P EA+    ++ +MH     P V ++N L   L KN        +F  +
Sbjct: 281 SSGQ-------PKEAI---GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
              GL P+I T+  L+  +   G +     +L  ++R+   PN   F+ LI     + ++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            +A  +F+K R     PD  TY T+I  LC++G    A+  FE+M +          P  
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGN 444

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           + YN++I  LC     DKAKEL L+M D  I  D + + S+I   C      E+++LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  GV+PD++T+S ++D  C  GKMD+A++LL  M+  G+ P+  TYNTLI+GYC   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL + +  + AL++F  +    +  +T T+N  I  L K G   EA +LF A+  + 
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 494 YELNIVSYNCLIDGL 508
              ++ +Y+ + + L
Sbjct: 685 LVPDVRTYSLMAENL 699



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 195/420 (46%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 361 LLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV        +++    +P  + + SLI  LC   +  +A  L  +        
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 531

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + PD VTY ++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C  +  D A ++F     N C+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF----QNLCL 647

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I    K    +EA  L++ + + G+ P V TY+ +   L E   +E 
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              LF  M  N   A++   N+ +  L + G +  A      I +  + L   + +  +D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 238/445 (53%), Gaps = 19/445 (4%)

Query: 73  RCKSSGQ---------GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           +CKSS             +NLI  N+AL I + + + +   P V S+N +   + + K  
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLI--NKALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQS 183

Query: 124 DTVL-SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
             +   +FK +  +G+ P++YT++ILI  FC  G +  G    G + R+   PN VT+ +
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNT 243

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           +I   C   +I EA  L     +    P++ +YN +INGLCR G       + EEM+   
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                   P+ VT+NT+I+G C  G   +A  L  +M    ++P+VVTYT++I   C A 
Sbjct: 304 ------YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAG 357

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           + N A     +M D+G+ P+  T++ ++D   + G + +A ++++ M+  G  P   TYN
Sbjct: 358 NLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI+G+C+  +++ A  L   M   G + DVVSY+T+I+ +C+N+++E+A  L  EM++K
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK 477

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           GI P V TY++L  GL +  ++     LF EM    +  D  TY + I+  C  G + +A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
           L L   +    +  +IV+YN LI+G
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLING 562



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 212/418 (50%), Gaps = 21/418 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K +       L + +   GL P++ +++++IN  C+ G++     +
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +  + P+ VTF +LI G C      +A  L  +       P+V TY TLIN +C+
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+   ++M +          PN  TY T+IDG  ++GF+ +A ++  +M +   
Sbjct: 356 AGNLNRAMEFLDQMRDRG------LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P ++TY ++I G C      +A  L  EM+++G  PDVV++S I+   C+N +++KA +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+ +G++P+  TY++LI G C   ++     LF  M S G   D V+Y +LIN YC
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              D+++AL L+ EM+ KG  P +VTYN L  G  +  + + A +L  ++       +  
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 465 TYNNFID---------------GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  ID               G C  G + EA  +  ++    Y+LN   YN +I G
Sbjct: 590 TYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 194/398 (48%), Gaps = 23/398 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L        ++   L L   +   GL P++ T++ LIN  CK G ++     
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      PN  T+T+LI G   +  + +A  +  +       P + TYN LING C 
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM     E G +  P+ V+Y+TII G C+   ++KA +L ++M  + I
Sbjct: 426 LGRMEDASGLLQEMI----ERGFI--PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV TY+S+I+G C      E   LF EM+  G+ PD VT++ +++  C  G +DKA R
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + MI +G +P+  TYN LI+G+    +   A++L + +     + + ++YNTLI+  C
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-C 598

Query: 405 KNKDVEEALSLY----------------SEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            N + + AL+L                   ML KG K     YN +  G  ++  +E+A 
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            L+ EM  +  A  + T       L   G  +E  +L 
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 209/422 (49%), Gaps = 34/422 (8%)

Query: 42  EPSYPTTTSKLKE-SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRM 100
           E     T+  L+E S R  V DR +    +   C        N+   ++AL +   M++ 
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC--------NVGNFHQALVLHAEMVKN 337

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
             SP  V ++  L   + K  + +  +    ++   GL P+  T++ LI+ F + G +  
Sbjct: 338 GLSPN-VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            + ++  ++ + FTP  +T+ +LI G C   R+ +A+ L  +       PDV +Y+T+I+
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 221 GLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           G CR      A  L  EM A G         P+  TY+++I GLCK+  + +  +LF +M
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKG-------ISPDVATYSSLIQGLCKQRRLGEVCDLFQEM 509

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + PD VTYTS+I  +C   D ++A RL  EM+ +G  PD+VT++V+++   K  + 
Sbjct: 510 LSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRT 569

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTDKIDHARKLFVSM 384
            +A RLL  +++    PN  TYNTLID               G+C+   ++ A ++  SM
Sbjct: 570 KEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF-EIHQ 443
              G   +   YN +I+ + K  ++E+A +LY EML  G  P  VT   L   L+ E  +
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689

Query: 444 VE 445
           VE
Sbjct: 690 VE 691



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 1/216 (0%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK-ASRLLELMIWR 352
           V++     N  N+A  +       G  P V++++ I+D + +  +  K A  + + M+  
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+PN YTYN LI G+C    ++     F  ME NGC+ +VV+YNT+I+ YCK + + EA
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L   M  KG+ P +++YN +  GL    Q++   ++ +EM +     D  T+N  I+G
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C  G   +AL L   +  +    N+V+Y  LI+ +
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ +     +N+  +    L   + + G+ PD+ T+S LI   CK  R+     +
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+ VT+TSLI   C E  + +A  L  +       PD+ TYN LING  +
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID---------------GLCKEGFV 269
              T  A  L  ++     E  V   PN +TYNT+ID               G C +G +
Sbjct: 566 QSRTKEAKRLLLKLLY---EESV---PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLM 619

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A  +   M  +    +   Y  +I G     +  +A  L+ EM+  G  P  VT   +
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679

Query: 330 MDELCKNGKMDKASRLLE 347
              L   GK  + ++LL+
Sbjct: 680 AKSLYHEGKEVELNQLLD 697


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 202/336 (60%), Gaps = 10/336 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            TP  +TF +LI GLC E R++EAAAL  K        DV TY T++NG+C+ G T  AL
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           NL  +M   +       KP+ V Y+ IID LCK+G    A+ LF +M ++ I P+V TY 
Sbjct: 66  NLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 119

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            +I GFC    W++A+RL  +M+++ + PDV+TF+ ++    K GK+ +A +L + M+ R
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            + P+T TYN++I G+C  ++ D A+ +F  M S     DVV++NT+I+ YC+ K V+E 
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEG 235

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + L  E+  +G+     TYNTL  G  E+  +  A  LF EM  + V  DT T N  + G
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C++  + EALELF  I+ SK +L+ V+YN +I G+
Sbjct: 296 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 331



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 209/403 (51%), Gaps = 10/403 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L          +L  ++   GL  D+ T+  ++N  CKMG       +
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  +   P+ V ++++I  LC +    +A  LF++       P+VFTYN +I+G C 
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L  +M            P+ +T+N +I    KEG + +A++L  +M    I
Sbjct: 128 FGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY S+I GFC  N +++AK +F    D    PDVVTF+ I+D  C+  ++D+  +
Sbjct: 182 FPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQ 237

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  RG+  NT TYNTLI G+C  D ++ A+ LF  M S+G   D ++ N L+  +C
Sbjct: 238 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 297

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +N+ +EEAL L+  +    I    V YN +  G+ +  +V+ A  LF  +  + V  D  
Sbjct: 298 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 357

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I G C    + +A  LF  ++D+ +E +  +YN LI G
Sbjct: 358 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 400



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 197/372 (52%), Gaps = 10/372 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           GL P + T + LIN  C  GRV     ++ +++      + VT+ +++ G+C       A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L +K      +PDV  Y+ +I+ LC+ GH   A  LF EM     E G+   PN  TY
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML----EKGIA--PNVFTY 118

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N +IDG C  G    A+ L   M +  INPDV+T+ ++I          EA++L  EM+ 
Sbjct: 119 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 178

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + + PD VT++ ++   CK+ + D A  + +LM     +P+  T+NT+ID YC   ++D 
Sbjct: 179 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE 234

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             +L   +   G + +  +YNTLI+ +C+  ++  A  L+ EM+S G+ P  +T N L  
Sbjct: 235 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 294

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  E  ++E AL+LF+ ++ + +  DT  YN  I G+CK   V EA +LF ++     E 
Sbjct: 295 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 354

Query: 497 NIVSYNCLIDGL 508
           ++ +YN +I G 
Sbjct: 355 DVQTYNVMISGF 366



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 14/369 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +   L K+ H+     LF  +   G+ P+++T++ +I+ FC  GR S    +
Sbjct: 78  PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
           L  ++     P+ +TF +LI     E ++ EA  L  +  HR     PD  TYN++I G 
Sbjct: 138 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF--PDTVTYNSMIYGF 195

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A ++F+ MA+          P+ VT+NTIID  C+   VD+  +L  ++   
Sbjct: 196 CKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +  +  TY ++I GFC  ++ N A+ LF EM+  GV PD +T ++++   C+N K+++A
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L E++    ++ +T  YN +I G C   K+D A  LF S+  +G   DV +YN +I+ 
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 365

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C    + +A  L+ +M   G +P   TYNTL  G  +  +++++++L  EMR N  + D
Sbjct: 366 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 425

Query: 463 TYTYNNFID 471
            +T     D
Sbjct: 426 AFTIKMVAD 434



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 4/228 (1%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M +  + P V+T+ ++I G C      EA  L  +M+ +G+  DVVT+  I++ +CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
              A  LL  M    + P+   Y+ +ID  C       A+ LF  M   G   +V +YN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I+ +C      +A  L  +M+ + I P V+T+N L     +  ++  A KL DEM    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           +  DT TYN+ I G CK     +A  +F    D     ++V++N +ID
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIID 224



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 3/183 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A  +F  M+  H   P   + NIL     +N+  +  L LF+ +  + +  D   ++I
Sbjct: 268 NAAQDLFQEMIS-HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 326

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK  +V   + +   +      P+  T+  +I G C +S I +A  LF K +   
Sbjct: 327 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 386

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD  TYNTLI G  + G    ++ L  EM + NG  G       V  + I DG   + 
Sbjct: 387 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS-NGFSGDAFTIKMVA-DLITDGRLDKS 444

Query: 268 FVD 270
           F D
Sbjct: 445 FSD 447



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+  G+ P V+T+NTL  GL    +V  A  L ++M    +  D  TY   ++G+CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              AL L   + ++  + ++V Y+ +ID L
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRL 90


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 216/400 (54%), Gaps = 40/400 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP V  FN +    A  KHY T +SL  RL   G+ PD +T +I
Sbjct: 52  DDAVSQFNSMLCMRHTPP-VIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+NCFC MG+++ GF VL +IL+  + P+ +TFT+LIKGLC + ++ +A     K     
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  +Y TLING+C+ G T  A+ L  ++       G + KPN   YNTIID LCK  
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIIDALCKYQ 224

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ +VV+Y  +I+GFC +   +EA  LF EM  + + P +VT+ 
Sbjct: 225 LVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYG 284

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-- 385
            +MD LCK+G++     L++ M  RG+  +  TYN+LIDG C    +D A  LF  M+  
Sbjct: 285 SLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDX 344

Query: 386 ---------------SNGCMH----------------DVVSYNTLINWYCKNKDVEEALS 414
                            G +                 DV  YN +IN YCK   +EEAL+
Sbjct: 345 RFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALT 404

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           + S+M   G  P+ VT+  +   LFE  + ++A KL  EM
Sbjct: 405 MRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 8/334 (2%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           TP  + F  ++           A +L  +  +   +PD FT N L+N  C  G      +
Sbjct: 67  TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFS 126

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           +  ++     +      P+T+T+ T+I GLC +G V+KA     K+  + I  D V+Y +
Sbjct: 127 VLAKILKRGYQ------PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGT 180

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G C   D   A +L  ++  +  +P+V  ++ I+D LCK   + +A  L   M  +G
Sbjct: 181 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           ++ N  +YN +I G+C +  +D A  LF  M     +  +V+Y +L++  CK+  +    
Sbjct: 241 ISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVW 300

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L  EM  +GI   V+TYN+L  GL +   ++RA+ LF++M+      D  T+   +DGL
Sbjct: 301 ELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFTILLDGL 358

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G + +A E+F+ +   +Y+L++  YN +I+G
Sbjct: 359 CKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMING 392



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           +A + F         P V  +N +++      H   A++L   +     E   + +P+  
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRL-----ELKGI-QPDFF 106

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T N +++  C  G ++    +  K+      P  +T+T++I+G C     N+A     ++
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           + QG++ D V++  +++ +CK G    A +L+  +  R   PN   YNT+ID  C    +
Sbjct: 167 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 226

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  LF  M + G   +VVSYN +I  +CK+K V+EAL+L+ EM  K + PT+VTY +L
Sbjct: 227 SEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL 286

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  ++    +L DEM    + AD  TYN+ IDGLCK+G +  A+ LF  ++D ++
Sbjct: 287 MDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF 346

Query: 495 ELNIVSYNCLIDGL 508
           +   +++  L+DGL
Sbjct: 347 DR--LTFTILLDGL 358



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F  L   L      +  L    +L + G+  D  ++  LIN  CK+G       +
Sbjct: 138 PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 197

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + +I      PN   + ++I  LC    + EA  LF++        +V +YN +I G C+
Sbjct: 198 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCK 257

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     ALNLF+EM   N        P  VTY +++DGLCK G +    EL  +M D  I
Sbjct: 258 SKMVDEALNLFKEMHQKN------MVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGI 311

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DV+TY S+I G C     + A  LF +M D   + D +TF++++D LCK G++  A  
Sbjct: 312 PADVITYNSLIDGLCKNGHLDRAIALFNKMKD--XRFDRLTFTILLDGLCKGGRLKDAQE 369

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + ++ +  + + Y YN +I+GYC    ++ A  +   ME NGC+   V++  +IN   
Sbjct: 370 VFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALF 429

Query: 405 KNKDVEEALSLYSEMLSKGI 424
           +  + ++A  L  EM+++G+
Sbjct: 430 EKDENDKAEKLLHEMIARGL 449



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 35/275 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A   F  M      P V+ +  ++  F     ++ A  L   +  +G+QPD  T ++
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M+  C  G+++    +L  ++ RG  P+T T+ TLI G CL  +++ A      + + G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 389 CMHDVVSYNTLINWYCKNKD-----------------------------------VEEAL 413
              D VSY TLIN  CK  D                                   V EA 
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+SEM +KGI   VV+YN +  G  +   V+ AL LF EM + ++     TY + +DGL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CKSG +    EL   + D     ++++YN LIDGL
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGL 325



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 9/303 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL   D +L        VS +  L   + K       + L ++++     P++  ++ 
Sbjct: 157 NKALHFHDKLLAQGIKFDQVS-YGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNT 215

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK   VS  + +   +     + N V++  +IKG C    + EA  LF +     
Sbjct: 216 IIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKN 275

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + TY +L++GLC++G       L +EM +           + +TYN++IDGLCK G
Sbjct: 276 MVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRG------IPADVITYNSLIDGLCKNG 329

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  LF KMKD     D +T+T ++ G C      +A+ +F +++ +    DV  ++
Sbjct: 330 HLDRAIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYN 387

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V+++  CK G +++A  +   M   G  P+  T+  +I+     D+ D A KL   M + 
Sbjct: 388 VMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIAR 447

Query: 388 GCM 390
           G +
Sbjct: 448 GLL 450


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 232/436 (53%), Gaps = 21/436 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + PD+ T+
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGADEVTPDLCTY 90

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI C C+ GR+  GF  LG +++  F   A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+NGLC    +  AL L   MA+   + G    P+ V+Y T+I+G  
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMAD---DRGGGSPPDVVSYTTVINGFF 207

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN----DWN--------EAKRLFI 312
           KEG  DKA   + +M D  I PDVVTY+S+I   C        W+        E+++LF 
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFD 267

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M+  GV+PD++T+S ++D  C  GKMD+A +LL  M+  G+ PNT TY+TLI+GYC   
Sbjct: 268 LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 327

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN
Sbjct: 328 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 387

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +  GL +    + AL++F  +    +  +  T+N  ID L K G   EA +LF A   +
Sbjct: 388 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 447

Query: 493 KYELNIVSYNCLIDGL 508
               N  +Y  + + +
Sbjct: 448 GLVPNYWTYRLMAENI 463



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 149/338 (44%), Gaps = 56/338 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRL---NSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P V S+N L   L         L L   +      G  PD+ +++ +IN F K G     
Sbjct: 156 PNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCA------------ESRIMEAAALFTKHRVFACE 209
           +     +L     P+ VT++S+I  LC             E R++E+  LF        +
Sbjct: 216 YSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVK 275

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD+ TY+TLI+G C  G    A+ L   M +      V  KPNTVTY+T+I+G CK   +
Sbjct: 276 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNTVTYSTLINGYCKISRM 329

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A  LF +M+   ++PD++TY  +++G         AK L++ + + G Q ++ T+++I
Sbjct: 330 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 389

Query: 330 MDELCKN-----------------------------------GKMDKASRLLELMIWRGV 354
           +  LCKN                                   G+ D+A  L       G+
Sbjct: 390 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 449

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            PN +TY  + +       ++   +LF+SME NGC  D
Sbjct: 450 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 487



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           E+  +FD M+R+   P  ++   ++ G CLA     D  + L   + S GL P+  T+S 
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYST 318

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +CK+ R+    V+   +  S  +P+ +T+  +++GL    R   A  L+ +     
Sbjct: 319 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 378

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + ++ TYN +++GLC+   T  AL +F+ +   +       K    T+N +ID L K G
Sbjct: 379 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD------LKLEARTFNIMIDALLKVG 432

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+AK+LF+      + P+  TY  +           E  +LF+ M D G   D    +
Sbjct: 433 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 492

Query: 328 VIMDELCK 335
            I+ EL +
Sbjct: 493 FIVRELLQ 500


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 206/342 (60%), Gaps = 17/342 (4%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
            N VTFT+L+ GLC E R+++A AL  +      +PD  TY T++NG+C+ G T+ ALN+
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             +M           K N V Y+ I+D LCK+G   KA+ +F +M ++ I P+V+TY  +
Sbjct: 68  LRKMDESQ------IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCM 121

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G+C    W++A++L  +M+++ + PDVVTFS +++   K GK+  A  L   M+ R +
Sbjct: 122 IDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK------- 407
            P T TY+++IDG+C   +++ A+ +F  M S GC  D+++ NTLI+  C+ K       
Sbjct: 182 FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGF 241

Query: 408 ----DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
               +V  A  L+ EM+S G+ P +VT NTL  GL E  ++E+AL++F   +++ +  DT
Sbjct: 242 CQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDT 301

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            T N  I+G+CK   V EA +LF ++  +  E ++V+YN LI
Sbjct: 302 ATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILI 343



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 213/400 (53%), Gaps = 19/400 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +         +     L + +    + PD+ T S LIN F K G+VS    +
Sbjct: 113 PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEEL 172

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR    P  +T++S+I G C  SR+ +A  +F       C PD+ T NTLI+G CR
Sbjct: 173 YREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR 232

Query: 225 T-----------GHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
                       G+  VA +LF+EM +NG         P+ VT NT++ GLC+ G ++KA
Sbjct: 233 AKRHLIHGFCQVGNVNVAQDLFQEMISNG-------VSPDIVTCNTLLAGLCENGKLEKA 285

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+F   +   ++ D  T   +I G C  N  +EA  LF  +   GV+ DVVT+++++  
Sbjct: 286 LEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV 345

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
             K G   +A  +   M+ +G+ P+T TYN+++DG+C  ++++ AR++  SM S GC  D
Sbjct: 346 FVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPD 405

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+++TLI  YCK   V++ L L+SEM  +G+    +TYN L  G  ++  +  A  +F+
Sbjct: 406 VVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFE 465

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           EM  + V  DT T+ + + GLC    + + L +   ++ S
Sbjct: 466 EMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 218/444 (49%), Gaps = 40/444 (9%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V +F  L   L +       L+L  R+   G  PD  T+  ++N  CK+G       
Sbjct: 7   PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L ++  S    N V +++++  LC +   ++A  +FT+       P+V TYN +I+G C
Sbjct: 67  MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCK-----------------------------PNTV 254
             G    A  L  +M   N +  VV                               P T+
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI-----------RGFCYAND 303
           TY+++IDG CK   ++ AK +F  M  +  +PD++T  ++I            GFC   +
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            N A+ LF EM+  GV PD+VT + ++  LC+NGK++KA  + ++     ++ +T T N 
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I+G C  +K+D A  LF S+  NG   DVV+YN LI  + K  +   A  +Y EML KG
Sbjct: 307 IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           I P+ VTYN++  G  + +++E A ++ D M     + D  T++  I G CK+G V + L
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 484 ELFRAIRDSKYELNIVSYNCLIDG 507
           ELF  +       + ++YN LI G
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHG 450



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 11/271 (4%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C  N VT+ T+++GLC+EG V +A  L  +M +E   PD VTY +++ G C   D   A 
Sbjct: 6   CPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  +M +  ++ +VV +S I+D LCK+G   KA  +   M  +G+ PN  TYN +IDGY
Sbjct: 66  NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGY 125

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K   A +L   M       DVV+++ LIN + K   V  A  LY EML + I PT 
Sbjct: 126 CSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTT 185

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS-----------G 477
           +TY+++  G  +  ++E A  +FD M     + D  T N  IDG C++           G
Sbjct: 186 ITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVG 245

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V  A +LF+ +  +    +IV+ N L+ GL
Sbjct: 246 NVNVAQDLFQEMISNGVSPDIVTCNTLLAGL 276



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M++ G   +VVTF+ +M+ LC+ G++ +A  L++ M+  G  P+  TY T+++G C    
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A  +   M+ +    +VV Y+ +++  CK+ +  +A ++++EM  KGI P V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G     +   A +L  +M   ++  D  T++  I+   K G V  A EL+R +    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 494 YELNIVSYNCLIDG 507
                ++Y+ +IDG
Sbjct: 181 IFPTTITYSSMIDG 194



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%)

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+  G    VVT+ TL  GL    +V +AL L D M       D  TY   ++G+CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + AL + R + +S+ + N+V Y+ ++D L
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRL 90


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/405 (34%), Positives = 212/405 (52%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N     L +N H    L +   +   G  PD++T++I++NC CK G++     +
Sbjct: 288 PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 347

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++     P+  TF +LI  LC+ +R+ EA  L  +  +    PDV+T+N LIN LC+
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   +AL LFEEM +        C P+ VTYNT+ID LC  G + KA +L  +M+    
Sbjct: 408 VGDPQLALRLFEEMKSSG------CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGC 461

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
               VTY ++I G C      EA+ +F +M  QG+  + +TF+ ++D LCK+ ++D A++
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  MI  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  C
Sbjct: 522 LISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLC 581

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    + AL L   M  KG++ T   YN +   LF  +    A+ LF EM       D +
Sbjct: 582 KAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAF 641

Query: 465 TYNNFIDGLCK-SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY     GLC+  G + EA +    + D  +     S+  L +GL
Sbjct: 642 TYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686



 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 213/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L +     T + + + ++S+G+ PD  T + L+  F + G +     V
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+L    +P  VT   LI G C   R+ +A     +      EPD  TYNT +NGLC+
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            GH   AL + + M     +      P+  TYN +++ LCK G +++AK +  +M +   
Sbjct: 303 NGHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGC 356

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+ ++I   C  N   EA  L  ++  +G+ PDV TF+++++ LCK G    A R
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALR 416

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYNTLID  C   K+  A  L   MES GC    V+YNT+I+  C
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L  +M    +  +  
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++ + +  + +E+++V+Y  LI+GL
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 212/399 (53%), Gaps = 12/399 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   L +      + +++  +   G+ PD+ T + L+   C+  +V    ++L  + 
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDVFTYNTLINGLCRTGH 227
            S   P+  TFT+L++G   E  I   AAL  K R+    C P   T N LING C+ G 
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSI--KAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270

Query: 228 TIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              AL  + +E+ANG        +P+ +TYNT ++GLC+ G V  A ++   M  E  +P
Sbjct: 271 VEDALGYIQQEIANG-------FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV TY  V+   C      EAK +  +M+++G  PD+ TF+ ++  LC   ++++A  L 
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +  +G++P+ YT+N LI+  C       A +LF  M+S+GC  D V+YNTLI+  C  
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +AL L  EM S G   + VTYNT+  GL +  ++E A ++FD+M    ++ +  T+
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N  IDGLCK   + +A +L   +     + N ++YN ++
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 176/362 (48%), Gaps = 29/362 (8%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V +  L+  L   S++     ++++      +PDV T+NTL+  LCR      A+ + 
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208

Query: 236 EEMA---------------NGNGEFGVV--------------CKPNTVTYNTIIDGLCKE 266
           EEM+                G  E G +              C P  VT N +I+G CK 
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V+ A     +       PD +TY + + G C       A ++   M+ +G  PDV T+
Sbjct: 269 GRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTY 328

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++++ LCKNG++++A  +L  M+ RG  P+  T+NTLI   C  ++++ A  L   +  
Sbjct: 329 NIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV ++N LIN  CK  D + AL L+ EM S G  P  VTYNTL   L  + ++ +
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGK 448

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL L  EM        T TYN  IDGLCK   + EA E+F  +       N +++N LID
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508

Query: 507 GL 508
           GL
Sbjct: 509 GL 510



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 6/304 (1%)

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +F  + D   YN L+N L       +   ++ EM    GE G+  KP+ VT+NT++  LC
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM----GERGI--KPDVVTFNTLMKALC 196

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +   V  A  +  +M    + PD  T+T++++GF        A R+   M++ G  P  V
Sbjct: 197 RAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV 256

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T +V+++  CK G+++ A   ++  I  G  P+  TYNT ++G C    + HA K+   M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   DV +YN ++N  CKN  +EEA  + ++M+ +G  P + T+NTL + L   +++
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E AL L  ++    ++ D YT+N  I+ LCK G    AL LF  ++ S    + V+YN L
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 505 IDGL 508
           ID L
Sbjct: 437 IDNL 440



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 94  FDYMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
            D +  M  +  P S+  +N +   L K    +    +F +++  G+  +  T + LI+ 
Sbjct: 450 LDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 509

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            CK  R+     ++ +++     PN +T+ S++   C +  I +AA +         E D
Sbjct: 510 LCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVD 569

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V TY TLINGLC+ G T VAL L   M       G+   P    YN +I  L +      
Sbjct: 570 VVTYGTLINGLCKAGRTQVALKLLRGMRIK----GMRATPK--AYNPVIQSLFRRNNTRD 623

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCY-ANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           A  LF +M +    PD  TY  V RG C       EA    +EM+D+G  P+  +F ++ 
Sbjct: 624 AMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLA 683

Query: 331 DELCKNGKMDKASRLLELMIWRG 353
           + L   G  D   R +E++I + 
Sbjct: 684 EGLLNLGMDDYFIRAIEIIIEKA 706


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 218/407 (53%), Gaps = 13/407 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  +   L             + + +  L P++ T+++LI+  CK GRV     +
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ + C  P AVT+ SLI GLC   R  EA  L  +     C PD+FTY TLI G C+
Sbjct: 104 LSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDE 282
           +  +  AL +FE++ A G        +P+ VTY+ +IDGLCKEG + +A +LF +M K  
Sbjct: 163 SKKSDDALRVFEQLVARGF-------RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           +  P+ VTY S+I GFC     +EA  L   M + G  PDVVT++ +M+  CK  ++D A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             LL  M  +G+ P+  T+ +L+DG C  +++  A  +   M    C   V +YNT+++ 
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YC+   +EEA     E +     P VV++N +  GL ++++   A++L +E RR     D
Sbjct: 336 YCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
              Y   IDGLC+   V EA  ++R + +    L N ++Y+ L+ GL
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 134/369 (36%), Positives = 207/369 (56%), Gaps = 10/369 (2%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D  T++ LI   CK+ R+    + LG+++   F P+  T+T++I  LC E+R+ EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +       P+V TY  LI+GLC+ G    A+ L  +M          C P  VTYN++I
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAVTYNSLI 122

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            GLCK     +A +L  +M      PD+ TYT++I GFC +   ++A R+F +++ +G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARK 379
           PDVVT+S ++D LCK G++ +A  L   MI  G   PNT TYN+LI G+C   K+D A  
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M   G   DVV+Y TL+N +CK   +++A  L ++M  KG+ P VVT+ +L  GL 
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
             +++  A+ +  EMRR   +   YTYN  +DG C++  + EA +    + +     N+V
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVV 360

Query: 500 SYNCLIDGL 508
           S+N +I GL
Sbjct: 361 SFNIMIRGL 369



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 165/302 (54%), Gaps = 15/302 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M++     P   ++N L     +    D  ++L +R+   G  PD+ T++ L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N FCK+ R+   + +L ++ R   TP+ VTFTSL+ GLC E+R+ +A  +  + R  +C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 209 EPDVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P V+TYNT+++G CR      A   + EEM          C PN V++N +I GLCK  
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD---------CPPNVVSFNIMIRGLCKVN 373

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTF 326
              +A EL  + +    NPDVV YT+VI G C     +EA R++ +M+++ G  P+ +T+
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++  LC  G +D+A   +E    +G  PN  TYN LID +   ++ + AR+L   M  
Sbjct: 434 STLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 387 NG 388
            G
Sbjct: 490 RG 491



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 156/260 (60%), Gaps = 2/260 (0%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C  + VTY ++I GLCK   +++A     KM  +  +PDV TYT+VI   C  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +   EM ++ + P+VVT++V++D LCK G++D+A  LL  M  + V P   TYN+LI G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  ++   A  L   M  +GC+ D+ +Y TLI  +CK+K  ++AL ++ +++++G +P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VTY+ L  GL +  +++ A+ LF  M +      +T TYN+ I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + ++    ++V+Y  L++G
Sbjct: 246 RMAETGSSPDVVTYTTLMNG 265



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 180/338 (53%), Gaps = 15/338 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           ++AL +F+ ++      P V +++ L   L K       + LF R+  S    P+  T++
Sbjct: 167 DDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+ FC+MG++     +L R+  +  +P+ VT+T+L+ G C  +R+ +A  L  +    
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV T+ +L++GLCR      A+++  EM   +      C P   TYNTI+DG C+ 
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS------CSPTVYTYNTILDGYCRA 339

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +++A++  L+  D    P+VV++  +IRG C  N  +EA  L  E   +   PDVV +
Sbjct: 340 NQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397

Query: 327 SVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           + ++D LC+  K+D+A R+   M+   G  PN+ TY+TL+ G C    +D AR       
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI---- 453

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
             GC+ ++ +YN LI+ + K    E+A  L  +M+ +G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           +N C  D V+Y +LI   CK K +E+AL    +M+SKG  P V TY  +   L   +++ 
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K  +EM   ++  +  TY   IDGLCK G V EA+ L   +R  K     V+YN LI
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLI 122

Query: 506 DGL 508
            GL
Sbjct: 123 SGL 125


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 241/460 (52%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + ++N +   L K +  D   +  +++ +  +
Sbjct: 235 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 288

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++ LI  +   G+      V   + R    P+ VT + L+  LC   +I EA  
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGVV---- 248
           +F    +    PDVF+YN ++NG    G  +   +LF+ M  G+G       F V+    
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAY 407

Query: 249 --------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KP+ VTY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 408 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L  E+M+ G+  D+V FS I++ LCK G++  A  + +L
Sbjct: 468 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 527

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G++P+   YN L+DGYCL  K++ A ++F +M S G   +VV Y TL+N YCK   
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 587

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML +GIKP+ + Y+ +  GLFE  +   A   F EM  + +A D  TYN 
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + GL K+    EA+ LF+ +R    ++NI++ N +IDG+
Sbjct: 648 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 229/477 (48%), Gaps = 63/477 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG 137
           + P EA  + D + R   +P      N     LA+              ++LF R  S  
Sbjct: 46  LRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRA 104

Query: 138 -----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                L P  +T++IL++C  +  R        G++LR+    N +    L++G C   R
Sbjct: 105 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 164

Query: 193 IMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  +   HR     C PDVF+Y+ L+  LC  G +  A +L   MA G    G VC 
Sbjct: 165 TDEALDILL-HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 219

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA--------- 301
           PN V YNT+IDG  KEG V+KA +LF +M    I PD+VTY SV+   C A         
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279

Query: 302 --------------------------NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                       W EA R+F EM    + PDVVT S++M  LCK
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCMH 391
            GK+ +A  + + M  +G NP+ ++YN +++GY    CL D  D    LF  M  +G   
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD----LFDLMLGDGIAP 395

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D  ++N LI  Y     +++A+ +++EM   G+KP VVTY T+   L  I +++ A++ F
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    VA D Y YN  I G C  G +L+A EL   I ++   L+IV ++ +I+ L
Sbjct: 456 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 211/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R H   P V + ++L G L K         +F  +   G  PD+++++I+
Sbjct: 310 EAVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 368

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +   G +     +   +L     P+  TF  LIK       + +A  +F + R    
Sbjct: 369 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 428

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY T+I  LCR G    A+  F +M +     GV   P+   YN +I G C  G 
Sbjct: 429 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYNCLIQGFCTHGS 482

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KAKEL  ++ +  ++ D+V ++S+I   C      +A+ +F   ++ G+ PD V +++
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  C  GKM+KA R+ + M+  G+ PN   Y TL++GYC   +ID    LF  M   G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                + Y+ +I+   +      A   + EM   GI   + TYN +  GLF+    + A+
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF E+R  +V  +  T N  IDG+ ++  V EA +LF +I  S+   ++V+Y+ +I  L
Sbjct: 663 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 722



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 223/459 (48%), Gaps = 23/459 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 303 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK---YGKIK-----EARDVFDTMA 354

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+NI+    A       +  LF  +   G+ PD YT ++LI  +   G +
Sbjct: 355 -MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 413

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+ ++I  LC   ++ +A   F +       PD + YN L
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N      +V       +++II+ LCK G V  A+ +F  
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKLGRVMDAQNIFDL 527

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++PD V Y  ++ G+C      +A R+F  M+  G++P+VV +  +++  CK G+
Sbjct: 528 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 587

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ RG+ P+T  Y+ +IDG     +   A+  F  M  +G   D+ +YN 
Sbjct: 588 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 648 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 707

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           +     TY+  I  L K G V EA ++F +++++  E N
Sbjct: 708 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 196/414 (47%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P   +FN+L    A     D  + +F  +   G+ PD+ T+  +I   
Sbjct: 384 LFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 442

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 443 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 502

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             ++++IN LC+ G  + A N+F+   N      V   P+ V YN ++DG C  G ++KA
Sbjct: 503 VFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKA 556

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+VV Y +++ G+C     +E   LF EM+ +G++P  + +S+I+D 
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  +  TYN ++ G       D A  LF  + +     +
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I+   + + VEEA  L++ +    + P+VVTY+ +   L +   VE A  +F 
Sbjct: 677 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 736

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      ++   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 737 SMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 790



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 189/401 (47%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y ++ 
Sbjct: 414 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F+S+I  LC   R+M+A  +F       
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   YN L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIG 586

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M    I P  + Y+ +I G   A     AK  F EM + G+  D+ T++
Sbjct: 587 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYN 646

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  N  T NT+IDG   T +++ A+ LF S+  +
Sbjct: 647 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             +  VV+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 767 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 807


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 225/421 (53%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + + M++    P  ++  +IL G  +  +  + +    K++ S G+ PD+ T+S+
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI-GFLKKMRSDGVEPDVVTYSL 306

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR      +   + +    P   T+ +L++G   +  ++E   L        
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD + ++ LI      G    A+ +F +M            PN VTY  +I  LCK G
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG------LNPNAVTYGAVIGILCKSG 420

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A   F +M DE ++P  + Y S+I G C  N W  A+ L +EM+D+G+  + + F+
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+D  CK G++ ++ +L ELM+  GV PN  TYNTLI+GYCL  K+D A KL   M S 
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V+Y+TLIN YCK   +E+AL L+ EM S G+ P ++TYN +  GLF+  +   A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  +  +    +  TYN  + GLCK+    +AL++F+ +     +L   ++N +ID 
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 508 L 508
           L
Sbjct: 661 L 661



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 238/492 (48%), Gaps = 77/492 (15%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + PD+ T+
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTY 90

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI C C+ GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG--------------------- 243
              C P+VF+YN L+ GLC    +  AL L   MA+  G                     
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 244 -------------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
                        + G++  P+ VTYN+II  LCK   +DKA E+   M    + PD +T
Sbjct: 211 DSDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S++ G+C +    EA     +M   GV+PDVVT+S++MD LCKNG+  +A ++ + M 
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 351 WRGVNPNTYTYNTLIDGYC----------LTD-------------------------KID 375
            RG+ P   TY TL+ GY           L D                         K+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  +F  M   G   + V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + YN+L 
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL   ++ ERA +L  EM    +  +T  +N+ ID  CK G V+E+ +LF  +     +
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 496 LNIVSYNCLIDG 507
            N+++YN LI+G
Sbjct: 509 PNVITYNTLING 520



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 216/433 (49%), Gaps = 14/433 (3%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           SSGQ       P EA+     M R     P V ++++L   L KN        +F  +  
Sbjct: 278 SSGQ-------PKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            GL P+I T+  L+  +   G +     +L  ++R+   P+   F+ LI     + ++ +
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQ 389

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  +F+K R     P+  TY  +I  LC++G    A+  FE+M +          P  + 
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG------LSPGNIV 443

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I GLC     ++A+EL L+M D  I  + + + S+I   C      E+++LF  M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             GV+P+V+T++ +++  C  GKMD+A +LL  M+  G+ PNT TY+TLI+GYC   +++
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN + 
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +    + AL++F  +    +  +  T+N  ID L K G   EA +LF A   +   
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683

Query: 496 LNIVSYNCLIDGL 508
            N  +Y  + + +
Sbjct: 684 PNYWTYRLMAENI 696



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 205/404 (50%), Gaps = 7/404 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M +     P ++++  L    A       +  L   +   G+ PD Y  SIL
Sbjct: 319 EARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  +   G+V    +V  ++ +    PNAVT+ ++I  LC   R+ +A   F +      
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P    YN+LI+GLC       A  L  EM +       +C  NT+ +N+IID  CKEG 
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGR 491

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V ++++LF  M    + P+V+TY ++I G+C A   +EA +L   M+  G++P+ VT+S 
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  CK  +M+ A  L + M   GV+P+  TYN ++ G   T +   A++L+V +  +G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              ++ +YN +++  CKNK  ++AL ++  +    +K    T+N +   L ++ + + A 
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            LF     N +  + +TY    + +   G + E  +LF ++ D+
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 190/420 (45%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP       F+IL    A     D  + +F ++   GL P+  T+  +I 
Sbjct: 358 LLDLMVRNGIHPDH---YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV    +   +++    +P  + + SLI GLC  ++   A  L  +        
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +   +N++I+  C+ G  I +  LFE M       GV  KPN +TYNT+I+G C  G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + P+ VTY+++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C     D A ++F     N C+
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLCL 644

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I+   K    +EA  L+    S G+ P   TY  +   +     +E 
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +LF  M  N    D+   N  +  L + G +  A      I +  + L   + +  ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 39/287 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +F+ M+R+   P  ++   ++ G CLA     D  + L   + S GL P+  T+S LIN 
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYSTLING 555

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +CK+ R+    V+   +  S  +P+ +T+  +++GL    R   A  L+ +      + +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEM---------------------ANGNGEF----- 245
           + TYN +++GLC+   T  AL +F+ +                        N E      
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675

Query: 246 -----GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                G+V  PN  TY  + + +  +G +++  +LFL M+D     D      ++R    
Sbjct: 676 AFSSNGLV--PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733

Query: 301 ANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLL 346
             +   A   ++ M+D+     +  T S+ +D L   GK  +  R L
Sbjct: 734 RGEITRAGT-YLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 218/407 (53%), Gaps = 13/407 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  +   L             + + +  L P++ T+++LI+  CK GRV     +
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ + C  P AVT+ SLI GLC   R  EA  L  +     C PD+FTY TLI G C+
Sbjct: 104 LSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDE 282
           +  +  AL +FE++ A G        +P+ VTY+ +IDGLCKEG + +A +LF +M K  
Sbjct: 163 SKKSDDALRVFEQLVARGF-------RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           +  P+ VTY S+I GFC     +EA  L   M + G  PDVVT++ +M+  CK  ++D A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             LL  M  +G+ P+  T+ +L+DG C  +++  A  +   M    C   V +YNT+++ 
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YC+   +EEA     E +     P VV++N +  GL ++++   A++L +E RR     D
Sbjct: 336 YCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-NIVSYNCLIDGL 508
              Y   IDGLC+   V EA  ++R + +    L N ++Y+ LI GL
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440



 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 134/369 (36%), Positives = 207/369 (56%), Gaps = 10/369 (2%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D  T++ LI   CK+ R+    + LG+++   F P+  T+T++I  LC E+R+ EA    
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +       P+V TY  LI+GLC+ G    A+ L  +M          C P  VTYN++I
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-------CVPTAVTYNSLI 122

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            GLCK     +A +L  +M      PD+ TYT++I GFC +   ++A R+F +++ +G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARK 379
           PDVVT+S ++D LCK G++ +A  L   MI  G   PNT TYN+LI G+C   K+D A  
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M   G   DVV+Y TL+N +CK   +++A  L ++M  KG+ P VVT+ +L  GL 
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
             +++  A+ +  EMRR   +   YTYN  +DG C++  + EA +    + +     N+V
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVV 360

Query: 500 SYNCLIDGL 508
           S+N +I GL
Sbjct: 361 SFNIMIRGL 369



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 165/302 (54%), Gaps = 15/302 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M++     P   ++N L     +    D  ++L +R+   G  PD+ T++ L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N FCK+ R+   + +L ++ R   TP+ VTFTSL+ GLC E+R+ +A  +  + R  +C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 209 EPDVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P V+TYNT+++G CR      A   + EEM          C PN V++N +I GLCK  
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD---------CPPNVVSFNIMIRGLCKVN 373

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTF 326
              +A EL  + +    NPDVV YT+VI G C     +EA R++ +M+++ G  P+ +T+
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++  LC  G +D+A   +E    +G  PN  TYN LID +   ++ + AR+L   M  
Sbjct: 434 STLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 387 NG 388
            G
Sbjct: 490 RG 491



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 156/260 (60%), Gaps = 2/260 (0%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C  + VTY ++I GLCK   +++A     KM  +  +PDV TYT+VI   C  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +   EM ++ + P+VVT++V++D LCK G++D+A  LL  M  + V P   TYN+LI G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  ++   A  L   M  +GC+ D+ +Y TLI  +CK+K  ++AL ++ +++++G +P V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VTY+ L  GL +  +++ A+ LF  M +      +T TYN+ I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + ++    ++V+Y  L++G
Sbjct: 246 RMAETGSSPDVVTYTTLMNG 265



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 180/338 (53%), Gaps = 15/338 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           ++AL +F+ ++      P V +++ L   L K       + LF R+  S    P+  T++
Sbjct: 167 DDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+ FC+MG++     +L R+  +  +P+ VT+T+L+ G C  +R+ +A  L  +    
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV T+ +L++GLCR      A+++  EM   +      C P   TYNTI+DG C+ 
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS------CSPTVYTYNTILDGYCRA 339

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +++A++  L+  D    P+VV++  +IRG C  N  +EA  L  E   +   PDVV +
Sbjct: 340 NQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 397

Query: 327 SVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           + ++D LC+  K+D+A R+   M+   G  PN+ TY+TLI G C    +D AR       
Sbjct: 398 TTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI---- 453

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
             GC+ ++ +YN LI+ + K    E+A  L  +M+ +G
Sbjct: 454 EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           +N C  D V+Y +LI   CK K +E+AL    +M+SKG  P V TY  +   L   +++ 
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K  +EM   ++  +  TY   IDGLCK G V EA+ L   +R  K     V+YN LI
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLI 122

Query: 506 DGL 508
            GL
Sbjct: 123 SGL 125


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 231/436 (52%), Gaps = 21/436 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + PD+ T+
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGADEVTPDLCTY 90

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI C C+ GR+  GF  LG +++  F   A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+NGLC    +  AL L   MA+  G       P+ V+Y T+I+G  
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGG---SPPDVVSYTTVINGFF 207

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN----DWN--------EAKRLFI 312
           KEG  DKA   + +M D  I PDVVTY+S+I   C        W+        E+++LF 
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFD 267

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M+  GV+PD++T+S ++D  C  GKMD+A +LL  M+  G+ PNT TY+TLI+GYC   
Sbjct: 268 LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 327

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN
Sbjct: 328 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 387

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +  GL +    + AL++F  +    +  +  T+N  ID L K G   EA +LF A   +
Sbjct: 388 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 447

Query: 493 KYELNIVSYNCLIDGL 508
               N  +Y  + + +
Sbjct: 448 GLVPNYWTYRLMAENI 463


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/426 (31%), Positives = 224/426 (52%), Gaps = 11/426 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + +  +R    P  V+ +N+    L K +  D    L K+++     P   T++ 
Sbjct: 24  DEAFSVLERAVRAGCEPDYVT-YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   K GR+     VL +++    +P   T+T +I GL    R+ EA  +F       
Sbjct: 83  LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD F Y  LI GLC++G    A  L++E AN          P+ VTY ++IDGLCK G
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKE-ANARKHHATAV-PDVVTYTSLIDGLCKAG 200

Query: 268 FVDKAKELFLKMKDENIN----PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + +A+++F    DE +     PD VTYTS+I G C      E    F EM ++G +PD 
Sbjct: 201 RILEARQVF---DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT++ ++D   K   + KA R+   M+  G   +T TYN ++DG C   ++  A   F++
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ME  GC+  VV+Y+ L++ +C   +V  A+ L+  ML +G +P +V+YN +  GL    +
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKS-GFVLEALELFRAIRDSKYELNIVSYN 502
           + +A   F+++ +  +  D YT+N F+ GLC+    V + +ELF ++       N+ SY+
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437

Query: 503 CLIDGL 508
            L+DG+
Sbjct: 438 ILMDGI 443



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 219/445 (49%), Gaps = 48/445 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L K    D  +++ +++   G  P + T++++I+   K GRV     +
Sbjct: 75  PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 134

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT-----KHRVFACEPDVFTYNTLI 219
              +L +   P+A  +T+LIKGLC   +  EA AL+      KH   A  PDV TY +LI
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV-PDVVTYTSLI 193

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +GLC+ G  + A  +F++ A   G       P+ VTY +IIDGLCK G V++  E F +M
Sbjct: 194 DGLCKAGRILEARQVFDDEAVERGFI-----PDAVTYTSIIDGLCKLGRVEEGCERFHEM 248

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           ++    PD VTY ++I GF  A    +A R++ +M+  G     VT+++I+D LCK G++
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A      M  RG      TY+ L+DG+C    +  A +LF  M   GC  ++VSYN +
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 400 INWYCKNKD------------------------------------VEEALSLYSEMLSKG 423
           I   C+                                       V + + L+  M+S+G
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
             P + +Y+ L  G+     +E AL++F EM    VA D   +N  I  LC +G V EAL
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 488

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           E+FR + + +   +  SY  L+DGL
Sbjct: 489 EVFREL-ERRSAPDAWSYWSLLDGL 512



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 192/401 (47%), Gaps = 48/401 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS----AGLFPDIYTHSILINCFCKMGRVSH 160
           P    +  L   L K+   +   +L+K  N+    A   PD+ T++ LI+  CK GR+  
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILE 204

Query: 161 GFVVLG-RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
              V     +   F P+AVT+TS+I GLC   R+ E    F + R    EPD  TY  LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +G  +      A  ++ +M       G V   +TVTYN I+DGLCK G V +A   FL M
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQS----GTVV--STVTYNIILDGLCKAGRVAEAYATFLAM 318

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           ++      VVTY++++ GFC   + + A  LF  M+D+G +P++V++++I+  LC+ GK+
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 340 DKA------------------------------------SRLLELMIWRGVNPNTYTYNT 363
            KA                                      L E M+ +G +PN ++Y+ 
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L+DG C    ++ A ++F  M S G   DVV +NTLI W C    V+EAL ++ E L + 
Sbjct: 439 LMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERR 497

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             P   +Y +L  GL    ++E A  L   M+    A   Y
Sbjct: 498 SAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHY 538



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 143/264 (54%), Gaps = 5/264 (1%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+ V +  +I+GLC+E  +D+A  +  +       PD VTY   I G C A   ++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L  +M ++   P  VT++ ++D L K G++D+A  +LE M+ +G +P   TY  +IDG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG----I 424
               +++ AR++FV M  NGC  D   Y  LI   CK+   EEA +LY E  ++      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLF-DEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            P VVTY +L  GL +  ++  A ++F DE        D  TY + IDGLCK G V E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 484 ELFRAIRDSKYELNIVSYNCLIDG 507
           E F  +R+  YE + V+Y  LIDG
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDG 266


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 232/421 (55%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +   M++    P  ++  +IL G  +  +  + +    K++ S G+ PD+ T++ 
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI-GFLKKMRSDGVEPDVVTYNS 306

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR +    +   + +    P+  T+ +L++G   +  ++E  AL        
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N LI    +      A+ +F +M     + G+   PN VTY  +I  LCK G
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMR----QHGL--NPNVVTYGAVIGILCKSG 420

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F +M DE + P+++ YTS+I   C  + W++A+ L +EM+D+G+  + + F+
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+   CK G++ ++ +L +LM+  GV PN  TY+TLIDGYCL  K+D A KL  SM S 
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YNTLIN YC+   +++AL+L+ EM+S G+ P ++TYN +  GLF   +   A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  + ++    +  TYN  + GLCK+    EAL +F+ +  +  +L   ++N +I  
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660

Query: 508 L 508
           L
Sbjct: 661 L 661



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/424 (33%), Positives = 217/424 (51%), Gaps = 9/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P ++T+
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 90

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI C C+ GR+  GF  LG +++  F   A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
             +C PDVF+   L+ GLC    +  AL L   MA+  G       P+ V+Y T+I+G  
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTTVINGFF 207

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG  DKA   + +M D  I+PDVVTY+S+I   C     ++A  +   M+  GV P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C + +  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   D+ +Y TL+  Y     + E  +L   M+  GI P    +N L     +  +V
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A+ +F +MR++ +  +  TY   I  LCKSG V +A+  F  + D     NI+ Y  L
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447

Query: 505 IDGL 508
           I  L
Sbjct: 448 IHSL 451



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 208/422 (49%), Gaps = 7/422 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA+     M R     P V ++N L   L KN        +F  +   GL PDI T+ 
Sbjct: 282 PKEAIGFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYC 340

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            L+  +   G +     +L  ++R+   P+   F  LI     + ++ EA  +F+K R  
Sbjct: 341 TLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH 400

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+V TY  +I  LC++G    A+  FE+M +          PN + Y ++I  LC  
Sbjct: 401 GLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG------LTPNIIVYTSLIHSLCIF 454

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              DKA+EL L+M D  I  + + + S+I   C      E+++LF  M+  GV+P+V+T+
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++D  C  GKMD+A++LL  M   G+ P+  TYNTLI+GYC   ++D A  LF  M S
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G   ++++YN ++      +    A  LY  +   G +  + TYN +  GL + +  + 
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL++F  +    +  +T T+N  I  L K G   EA +LF A   +    N  +Y  + +
Sbjct: 635 ALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694

Query: 507 GL 508
            +
Sbjct: 695 NI 696



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 194/424 (45%), Gaps = 19/424 (4%)

Query: 89  EALCIFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           E   + D M+R  +HP       FNIL    AK +  D  + +F ++   GL P++ T+ 
Sbjct: 354 EMHALLDLMVRNGIHPDH---HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I   CK G V    +   +++    TPN + +TSLI  LC   +  +A  L  +    
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               +   +N++I+  C+ G  I +  LF+ M       GV  KPN +TY+T+IDG C  
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV----RIGV--KPNVITYSTLIDGYCLA 524

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A +L   M    + PD VTY ++I G+C  +  ++A  LF EM+  GV P+++T+
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++I+  L    +   A  L   +   G      TYN ++ G C  +  D A ++F     
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF----Q 640

Query: 387 NGCMHDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           N C+ D+     ++N +I    K    +EA  L+    S G+ P   TY  +   +    
Sbjct: 641 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            +E   +LF  M  N    D+   N  +  L + G +  A      I +  + L   + +
Sbjct: 701 LLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS 760

Query: 503 CLID 506
             ID
Sbjct: 761 LFID 764



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 35/285 (12%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +FD M+R+   P  ++   ++ G CLA     D    L   + S G+ PD  T++ LIN 
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGK--MDEATKLLSSMFSVGMKPDCVTYNTLING 555

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +C++ R+     +   ++ S  +PN +T+  +++GL    R   A  L+        + +
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615

Query: 212 VFTYNTLINGLCRTGHTIVALNLFE---------EMANGNGEFGVVCK------------ 250
           + TYN +++GLC+   T  AL +F+         E    N   G + K            
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFV 675

Query: 251 --------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                   PN  TY  + + +  +G +++  +LF  M+D     D      ++R      
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735

Query: 303 DWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +   A   ++ M+D+     +  T S+ +D L   GK  +  R L
Sbjct: 736 EITRAGT-YLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFL 778


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 224/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ P+  T++ +++ +C  G+       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VCK-----------------------PNTV 254
            G  +    L + M   NG       F + +C                        P+TV
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T+I  LCK G V+ A   F +M DE ++P  + Y S+I   C  + W++AK L +EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+G+  D + F+ I+D  CK G++ ++ +L +LM+  GV P+  TY+TLIDGYCL  K+
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL  SM S G   D V+YNTLIN YCK   +E+AL L+ EM S G+ P ++TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  +  +    +  TYN  + GLCK+    EAL +F+ +  +  
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 495 ELNIVSYNCLIDGL 508
           +L   ++N +I  L
Sbjct: 651 QLETRTFNIMIGAL 664



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 219/424 (51%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P++ T+
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTY 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI   C  GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+ GLC    +  AL L + M +  G+    C P+ V+Y T+I+G  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFF 210

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +DKA   + +M D  I P+VVTY+S+I   C A   ++A  +   M+  GV P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +V
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR+  +  DT TY   I  LCKSG V +A+  F  + D +     + YN L
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 505 IDGL 508
           I  L
Sbjct: 451 IHSL 454



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 222/435 (51%), Gaps = 18/435 (4%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           SSGQ       P EA+    ++ +MH     P V ++N L   L KN        +F  +
Sbjct: 281 SSGQ-------PKEAI---GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
              GL P+I T+  L+  +   G +     +L  ++R+   PN   F+ LI     + ++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            +A  +F+K R     PD  TY T+I  LC++G    A+  FE+M +          P  
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGN 444

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           + YN++I  LC     DKAKEL L+M D  I  D + + S+I   C      E+++LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  GV+PD++T+S ++D  C  GKMD+A++LL  M+  G+ P+  TYNTLI+GYC   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL + +  + AL++F  +    +  +T T+N  I  L K G   EA +LF A+  + 
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 494 YELNIVSYNCLIDGL 508
              ++ +Y+ + + L
Sbjct: 685 LVPDVRTYSLMAENL 699



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 195/420 (46%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 361 LLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV        +++    +P  + + SLI  LC   +  +A  L  +        
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 531

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + PD VTY ++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C  +  D A ++F     N C+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF----QNLCL 647

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I    K    +EA  L++ + + G+ P V TY+ +   L E   +E 
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              LF  M  N   A++   N+ +  L + G +  A      I +  + L   + +  +D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 210/405 (51%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F+     L +N H D  L +   +   G  PD+YT+S +INC C  G +     +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + +++ S   P+  TF +LI  LC E+++ EA  L  +  V    P+V+T+N LIN LC+
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   +A+ LFEEM +        C P+ VTYN +ID LC  G + KA +L  +M+    
Sbjct: 419 VGDPHLAVRLFEEMKSSG------CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGC 472

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
               VTY ++I G C      EA+ +F +M   G+  + +TF+ ++D LC   ++D A+ 
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ MI  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  C
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +  + AL L   M  KG+KPT   YN +   LF  +    AL LF EM       D +
Sbjct: 593 KARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAF 652

Query: 465 TYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY     GLC+ G  + EA +    + D+ +     S+  L +GL
Sbjct: 653 TYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 213/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F  L     +    +  L L  R++  G  P   T ++LIN +CK+GRV      
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + + +   F P+ VTF++ + GLC    +  A  +        CEPDV+TY+T+IN LC 
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  +M +        C P+T T+NT+I  LC E  +++A +L  ++  + +
Sbjct: 349 NGELEEAKGIVNQMVDSG------CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGL 402

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+V T+  +I   C   D + A RLF EM   G  PD VT+++++D LC +GK+ KA  
Sbjct: 403 SPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALD 462

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G   +T TYNT+IDG C   +I+ A ++F  M+  G   + +++NTLI+  C
Sbjct: 463 LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLC 522

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             + +++A  L  +M+S+G++P  VTYN++     +   + +A  +   M  N    D  
Sbjct: 523 NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVV 582

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+GLCK+     AL+L R +R    +    +YN +I  L
Sbjct: 583 TYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSL 626



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN +   L + +   T + + + ++S  + PD  T + L+  F + G +     +
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+     +P +VT   LI G C   R+ +A     +      EPD  T++T +NGLC+
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQ 313

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            GH   AL +   M          C+P+  TY+T+I+ LC  G +++AK +  +M D   
Sbjct: 314 NGHVDHALKVLGLMLQEG------CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+ ++I   C  N   EA  L  E+  +G+ P+V TF+++++ LCK G    A R
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYN LID  C + K+  A  L   ME +GC    V+YNT+I+  C
Sbjct: 428 LFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLC 487

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K + +EEA  ++ +M   GI    +T+NTL  GL    +++ A +L D+M    +  +  
Sbjct: 488 KRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV 547

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++ + +  + +E+++V+Y  LI+GL
Sbjct: 548 TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 212/398 (53%), Gaps = 10/398 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   LA+      + S +  ++S G+ PD+ T + +I+  C+  R +   V++   +
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCR-ARQARTAVLMLEEM 222

Query: 170 RSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            SC   P+  TFT+L++G   E  I  A  L  +     C P   T N LING C+ G  
Sbjct: 223 SSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRV 282

Query: 229 IVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             AL  + +E+A+G        +P+ VT++T ++GLC+ G VD A ++   M  E   PD
Sbjct: 283 GDALGYIQQEIADG-------FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V TY++VI   C   +  EAK +  +M+D G  PD  TF+ ++  LC   ++++A  L  
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +  +G++PN YT+N LI+  C       A +LF  M+S+GC  D V+YN LI+  C + 
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +AL L  EM   G   + VTYNT+  GL +  ++E A ++FD+M    +  +  T+N
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             IDGLC +  + +A EL   +     + N V+YN ++
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 181/333 (54%), Gaps = 6/333 (1%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N   +  L+  L   S+I    + +T+      EPDV T+NT+I+ LCR      A+ + 
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           EEM++ +        P+  T+ T+++G  +EG ++ A  L  +M +   +P  VT   +I
Sbjct: 220 EEMSSCD------VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G+C      +A     + +  G +PD VTFS  ++ LC+NG +D A ++L LM+  G  
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+ YTY+T+I+  C   +++ A+ +   M  +GC+ D  ++NTLI   C    +EEAL L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             E+  KG+ P V T+N L   L ++     A++LF+EM+ +    D  TYN  ID LC 
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           SG + +AL+L + +  S    + V+YN +IDGL
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGL 486



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 9/274 (3%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           NL +  +     D +  M  S  P S+  +N +   L K +  +    +F +++  G+  
Sbjct: 450 NLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGR 509

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           +  T + LI+  C   R+     ++ +++     PN VT+ S++   C +  I +AA + 
Sbjct: 510 NAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADIL 569

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
                   E DV TY TLINGLC+   T  AL L   M           KP    YN +I
Sbjct: 570 QTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG------MKPTPKAYNPVI 623

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGV 319
             L +      A  LF +M +    PD  TY  V RG C       EA    +EM D G 
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGF 683

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
            P+  +F ++ + L   G  D   R +EL++ + 
Sbjct: 684 IPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKA 717



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 1/259 (0%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+   Y  II  L   G  D  K L  +M+ E     +    S I  +     +++A  L
Sbjct: 88  PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147

Query: 311 FIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
               +D  GVQ +   ++ ++  L +  K+         M  +G+ P+  T+NT+ID  C
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +   A  +   M S     D  ++ TL+  + +   +E AL L + M   G  PT V
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           T N L  G  ++ +V  AL    +   +    D  T++ F++GLC++G V  AL++   +
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327

Query: 490 RDSKYELNIVSYNCLIDGL 508
                E ++ +Y+ +I+ L
Sbjct: 328 LQEGCEPDVYTYSTVINCL 346


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 232/421 (55%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +   M++    P  ++  +IL G  +  +  + +    K++ S G+ PD+ T++ 
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI-GFLKKMRSDGVEPDVVTYNS 306

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR +    +   + +    P+  T+ +L++G   +  ++E  AL        
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   +N LI    +      A+ +F +M     + G+   PN VTY  +I  LCK G
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMR----QHGL--NPNVVTYGAVIGILCKSG 420

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F +M DE + P+++ YTS+I   C  + W++A+ L +EM+D+G+  + + F+
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+   CK G++ ++ +L +LM+  GV PN  TY+TLIDGYCL  K+D A KL  SM S 
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YNTLIN YC+   +++AL+L+ EM+S G+ P ++TYN +  GLF   +   A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  + ++    +  TYN  + GLCK+    EAL +F+ +  +  +L   ++N +I  
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660

Query: 508 L 508
           L
Sbjct: 661 L 661



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 203/388 (52%), Gaps = 7/388 (1%)

Query: 125 TVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             +S + R+  AG   + P ++T+ ILI C C+ GR+  GF  LG +++  F   A+TFT
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 182 SLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            L+KGLCA+ R  +A  +  +     +C PDVF+   L+ GLC    +  AL L   MA+
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
             G       P+ V+Y T+I+G  KEG  DKA   + +M D  I+PDVVTY+S+I   C 
Sbjct: 187 DRGGGSA---PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
               ++A  +   M+  GV P+ +T++ I+   C + +  +A   L+ M   GV P+  T
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN+L+D  C   +   ARK+F SM   G   D+ +Y TL+  Y     + E  +L   M+
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             GI P    +N L     +  +V+ A+ +F +MR++ +  +  TY   I  LCKSG V 
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           +A+  F  + D     NI+ Y  LI  L
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSL 451



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 211/422 (50%), Gaps = 7/422 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA+     M R     P V ++N L   L KN        +F  +   GL PDI T+ 
Sbjct: 282 PKEAIGFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYC 340

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            L+  +   G +     +L  ++R+   P+   F  LI     + ++ EA  +F+K R  
Sbjct: 341 TLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQH 400

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+V TY  +I  LC++G    A+  FE+M +          PN + Y ++I  LC  
Sbjct: 401 GLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG------LTPNIIVYTSLIHSLCIF 454

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              DKA+EL L+M D  I  + + + S+I   C      E+++LF  M+  GV+P+V+T+
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++D  C  GKMD+A++LL  M   G+ P+  TYNTLI+GYC   ++D A  LF  M S
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVS 574

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G   ++++YN ++      +    A  LY  +   G +  + TYN +  GL + +  + 
Sbjct: 575 SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDE 634

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL++F  +    +  +T T+N  I  L K G   EA +LF A+  +    ++ +Y+ + +
Sbjct: 635 ALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694

Query: 507 GL 508
            L
Sbjct: 695 NL 696



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 19/414 (4%)

Query: 89  EALCIFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           E   + D M+R  +HP       FNIL    AK +  D  + +F ++   GL P++ T+ 
Sbjct: 354 EMHALLDLMVRNGIHPDH---HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I   CK G V    +   +++    TPN + +TSLI  LC   +  +A  L  +    
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               +   +N++I+  C+ G  I +  LF+ M       GV  KPN +TY+T+IDG C  
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV----RIGV--KPNVITYSTLIDGYCLA 524

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A +L   M    + PD VTY ++I G+C  +  ++A  LF EM+  GV P+++T+
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++I+  L    +   A  L   +   G      TYN ++ G C  +  D A ++F     
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF----Q 640

Query: 387 NGCMHDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           N C+ D+     ++N +I    K    +EA  L++ + + G+ P V TY+ +   L E  
Sbjct: 641 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            +E    LF  M  N   A++   N+ +  L + G +  A      I +  + L
Sbjct: 701 LLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSL 754



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 180/369 (48%), Gaps = 10/369 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F  M R H   P V ++  + G L K+   D  +  F+++   GL P+I  ++ 
Sbjct: 388 DEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C   +      ++  +L      N + F S+I   C E R++E+  LF       
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+V TY+TLI+G C  G    A  L   M      F V  KP+ VTYNT+I+G C+  
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSM------FSVGMKPDCVTYNTLINGYCRVS 560

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  LF +M    ++P+++TY  +++G  +      AK L++ +   G Q ++ T++
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+  LCKN   D+A R+ + +    +   T T+N +I       + D A+ LF ++ +N
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 680

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV +Y+ +     +   +EE   L+  M   G        N++   L +   + RA
Sbjct: 681 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740

Query: 448 ---LKLFDE 453
              L + DE
Sbjct: 741 GTYLSMIDE 749


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/412 (34%), Positives = 226/412 (54%), Gaps = 14/412 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDIYTHSILINCFCKMGRVSHGF 162
           P V S+N L   L K + +     L + + S G    PD+ T+S L++ +CK G+V    
Sbjct: 43  PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESR 102

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     P+A+ +T ++  LC  +R+ EA  L  +     C P + T+NTLI+G 
Sbjct: 103 ELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR  +  +A +L + MA      GV  K + VTYNT++DGLCK G + +A++L  +MK  
Sbjct: 163 CREKNLEMADSLLQTMAAS----GV--KADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              PDVV Y+S + G C +     A ++  +M D    P+VVT++ I+D LCK+GK+D A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA 276

Query: 343 SRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
             ++E M    G   N   Y+T++DG C   +   AR +  +M   GC  DVV+Y++L+N
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-----RR 456
             CK   +EEA+    EM  +G KP  VTY +L  GL    ++  A ++ +EM       
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +H      TYN  I GLCK+G + +AL+ F+ +R    + + VSY+ +++GL
Sbjct: 397 DHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 204/401 (50%), Gaps = 22/401 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D + R   S P + +++ L     K    +    L K + S GL PD   ++ ++   
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK  R+     +L  ++R+   P  +TF +LI G C E  +  A +L         + DV
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
            TYNTL++GLC+ G    A  L E M A+G       C P+ V Y++ + GLCK G V  
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASG-------CAPDVVAYSSFVYGLCKSGKVLN 240

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-----GVQPDVVTF 326
           A ++  +M+D + +P+VVTY +++ G C +   + A    +EMM+Q     G   +VV +
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGY 296

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++D LCK G+  +A  ++E M   G  P+  TY++L++G C   KI+ A +    M  
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-----PTVVTYNTLFLGLFEI 441
            GC  + V+Y +L++  C    + EA  +  EM S G       P+V TYN L  GL + 
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKA 416

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            +++ ALK F  MR      D  +Y+  ++GL +SG  L+A
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 172/305 (56%), Gaps = 9/305 (2%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P+  T+N L+NG  + G       L E MA      G+  +PN V+YN +++GLCK 
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMA----ARGI--QPNVVSYNGLLEGLCKL 58

Query: 267 GFVDKAKELFLKM--KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
               +A+EL   M  +     PD+VTY++++ G+C A    E++ L  E++ +G++PD +
Sbjct: 59  ERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            ++ +M  LCK+ ++ +A  LLE MI  G  P   T+NTLI G C    ++ A  L  +M
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            ++G   DVV+YNTL++  CK   ++EA  L   M + G  P VV Y++   GL +  +V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNIVSYNC 503
             A ++ ++MR +    +  TYN  +DGLCKSG +  ALE+   +  S    LN+V Y+ 
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 504 LIDGL 508
           ++DGL
Sbjct: 299 VVDGL 303



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 179/340 (52%), Gaps = 5/340 (1%)

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R+   PN+VTF +L+ G   + R  +   L         +P+V +YN L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L  +M +  G       P+ VTY+T++ G CK G V++++EL  ++    + PD +
Sbjct: 63  EAEELVRDMISRGGRS----TPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            YT V+   C +    EA  L  EM+  G  P ++TF+ ++   C+   ++ A  LL+ M
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              GV  +  TYNTL+DG C   ++  A +L   M+++GC  DVV+Y++ +   CK+  V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNN 468
             A  +  +M      P VVTYNT+  GL +  +++ AL++ ++M   +    +   Y+ 
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +DGLCK G   EA  +  A+  +    ++V+Y+ L++GL
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGL 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 2/108 (1%)

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  GC  + V++N L+N + K     +   L   M ++GI+P VV+YN L  GL ++ +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 444 VERALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
              A +L  +M  R      D  TY+  + G CK+G V E+ EL + +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEV 108


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 224/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ P+  T++ +++ +C  G+       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VCK-----------------------PNTV 254
            G  +    L + M   NG       F + +C                        P+TV
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T+I  LCK G V+ A   F +M DE ++P  + Y S+I   C  + W++AK L +EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+G+  D + F+ I+D  CK G++ ++ +L +LM+  GV P+  TY+TLIDGYCL  K+
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL  SM S G   D V+YNTLIN YCK   +E+AL L+ EM S G+ P ++TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  +  +    +  TYN  + GLCK+    EAL +F+ +  +  
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 495 ELNIVSYNCLIDGL 508
           +L   ++N +I  L
Sbjct: 651 QLETRTFNIMIGAL 664



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 219/424 (51%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P++ T+
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTY 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI   C  GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+ GLC    +  AL L + M +  G+    C P+ V+Y T+I+G  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFF 210

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +DKA   + +M D  I P+VVTY+S+I   C A   ++A  +   M+  GV P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +V
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR+  +  DT TY   I  LCKSG V +A+  F  + D +     + YN L
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 505 IDGL 508
           I  L
Sbjct: 451 IHSL 454



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 222/435 (51%), Gaps = 18/435 (4%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           SSGQ       P EA+    ++ +MH     P V ++N L   L KN        +F  +
Sbjct: 281 SSGQ-------PKEAI---GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
              GL P+I T+  L+  +   G +     +L  ++R+   PN   F+ LI     + ++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            +A  +F+K R     PD  TY T+I  LC++G    A+  FE+M +          P  
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGN 444

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           + YN++I  LC     DKAKEL L+M D  I  D + + S+I   C      E+++LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  GV+PD++T+S ++D  C  GKMD+A++LL  M+  G+ P+  TYNTLI+GYC   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL + +  + AL++F  +    +  +T T+N  I  L K G   EA +LF A+  + 
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 494 YELNIVSYNCLIDGL 508
              ++ +Y+ + + L
Sbjct: 685 LVPDVRTYSLMAENL 699



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 195/420 (46%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 361 LLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV        +++    +P  + + SLI  LC   +  +A  L  +        
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 531

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + PD VTY ++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C  +  D A ++F     N C+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF----QNLCL 647

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I    K    +EA  L++ + + G+ P V TY+ +   L E   +E 
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              LF  M  N   A++   N+ +  L + G +  A      I +  + L   + +  +D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 208/373 (55%), Gaps = 7/373 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIME 195
           G+ P++YT++IL+   C  G+      V+G  +R     PN VT+ +L+   C    +  
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L    R     P + T+NT++NGLC+ G    A  +F+EMA           P+ V+
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG------LTPDGVS 262

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT++ G CK G + +A  +F +M  + + PDVVT+TS+I   C A +   A  L  +M 
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++G++ +  TF+ ++D  C+NG +D A   ++ M    + P+   YN LI+GYC   ++D
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            AR+L   ME+ G   DVV+Y+T+++ YCK  D + A  L  +ML KG+ P  +TY++L 
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL E  ++  A +LF++M +  +  D +TY   IDG CK G V +AL L   +      
Sbjct: 443 RGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVL 502

Query: 496 LNIVSYNCLIDGL 508
            ++V+Y+ LIDGL
Sbjct: 503 PDVVTYSVLIDGL 515



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 233/485 (48%), Gaps = 28/485 (5%)

Query: 38  ISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYM 97
           ++ ++ S P+    L   LR  V         L     + GQ +       EAL +    
Sbjct: 128 LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQRE-------EALGVVGDD 180

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P V ++N L     +    D    L   +   G+ P + T + ++N  CK GR
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +   + R   TP+ V++ +L+ G C    + EA A+F +       PDV T+ +
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+ +CR G+   A+ L  +M     E G+  + N  T+  +IDG C+ GF+D A     
Sbjct: 301 LIHAMCRAGNLERAVALVGQMR----ERGL--RMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M++  I P VV Y  +I G+C     +EA+ L  EM  +G++PDVVT+S I+   CK G
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             D A  L   M+ +GV P+  TY++LI G C   ++  A +LF  M   G   D  +Y 
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TLI+ +CK  +V++ALSL+ EM+ KG+ P VVTY+ L  GL +  + + A +L  ++   
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYE 534

Query: 458 HVAADTYTYN---------------NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
               D   Y                  + G    G + +A ++++++ D  ++L+   Y+
Sbjct: 535 DPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYS 594

Query: 503 CLIDG 507
            LI G
Sbjct: 595 VLIHG 599



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 190/430 (44%), Gaps = 59/430 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R   +P  VS +N L     K       L++F  +   G+ PD+ T + LI+  
Sbjct: 247 MFDEMAREGLTPDGVS-YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G +     ++G++       N  TFT+LI G C    + +A     + R    +P V
Sbjct: 306 CRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             YN LING C+ G    A  L  EM A G        KP+ VTY+TI+ G CK G  D 
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKG-------MKPDVVTYSTILSGYCKIGDTDS 418

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A EL  KM  + + PD +TY+S+IRG C      +A  LF +M+  G+QPD  T++ ++D
Sbjct: 419 AFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID 478

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG------------------------ 367
             CK G + KA  L + MI +GV P+  TY+ LIDG                        
Sbjct: 479 GHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVP 538

Query: 368 --------------------------YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                                     + +   ++ A K++ SM       D   Y+ LI+
Sbjct: 539 DNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIH 598

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +C+  ++ +ALS + ++L  G  P   +  +L  GLFE      A  +  E+      A
Sbjct: 599 GHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLA 658

Query: 462 DTYTYNNFID 471
           D  T    ID
Sbjct: 659 DAETSKALID 668


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/385 (35%), Positives = 209/385 (54%), Gaps = 7/385 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F  ML   P P  V  F+ LF  + +  HY+TV+ L K +   G+  DI++ SI
Sbjct: 44  DDALASFRLMLLRKPLPCIVE-FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSI 102

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC + RV  G  VL +IL+    P+ VTFT+L+ GLC E ++ +   L+    V  
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+V+TYN +IN L ++G    AL   ++M        V C PN V Y+T+IDG C  G
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEK------VGCVPNVVNYSTLIDGYCLRG 216

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A+ +F  M  +   P+V TYTS++ G+C      EA +L  E + +G+ PD+VTF+
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFT 276

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+  LC+ G+   A +L   +   G  PN  TY  L+DG C    ++ A  LF  M+ +
Sbjct: 277 TIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               ++V Y  LI+  CK   +++   L+S ++ +G+KP V TY  L   L +   +  A
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEA 396

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDG 472
            KLF +M  +    D   YN  I G
Sbjct: 397 HKLFRKMEEDGCTPDKCAYNVIIQG 421



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 6/334 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P  V F+ L   +           L  +      E D+ + + LIN  C        L++
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             ++     + G+  +P+ VT+ T+++GLC EG +D+   L+  M    + P+V TY  +
Sbjct: 120 LSKIL----KLGL--EPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I     +   NEA     +M   G  P+VV +S ++D  C  G+MD+A  + +LM+ +G 
Sbjct: 174 INSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN YTY +L++GYC  ++I+ A +L       G + D+V++ T+I+  C+      A  
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+  + + G  P ++TY  L  GL +   +E A  LF EM+R+ V  +   Y   ID LC
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G + +  ELF  + D   + N+ +Y  L+  L
Sbjct: 354 KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 143/280 (51%), Gaps = 9/280 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEAL     M ++   P  V+   ++ G CL      D   S+F  + S G  P++YT++
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCL--RGQMDEARSVFDLMVSKGCTPNVYTYT 241

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            L+N +CK+ R+     +L   LR    P+ VTFT++I GLC   R + A  LF      
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P++ TY  L++GLC+ G+   A  LF+EM           KPN V Y  +ID LCK 
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST------VKPNLVIYTILIDSLCKC 355

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +   KELF ++ DE + P+V TYT+++   C      EA +LF +M + G  PD   +
Sbjct: 356 GKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAY 415

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           +VI+    ++     A +L+E M+ RG + +  T   L D
Sbjct: 416 NVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 1/154 (0%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  A  +F Y+   H   P + ++ +L   L K+ + +   +LF+ +  + + P++  ++
Sbjct: 288 PLAAQQLFRYICA-HGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYT 346

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI+  CK G++  G  +  R++     PN  T+T+L+  LC E  I+EA  LF K    
Sbjct: 347 ILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED 406

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            C PD   YN +I G  +     +A  L EEM N
Sbjct: 407 GCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVN 440


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 224/434 (51%), Gaps = 31/434 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ P+  T++ +++ +C  G+       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VCK-----------------------PNTV 254
            G  +    L + M   NG       F + +C                        P+TV
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T+I  LCK G V+ A   F +M DE ++P  + Y S+I   C  + W++AK L +EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +D+G+  D + F+ I+D  CK G++ ++ +L +LM+  GV P+  TY+TLIDGYCL  K+
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL  SM S G   D V+YNTLIN YCK   +E+AL L+ EM S G+ P ++TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A +L+  +  +    +  TYN  + GLCK+    EAL +F+ +  +  
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 495 ELNIVSYNCLIDGL 508
           +L   ++N +I  L
Sbjct: 651 QLETRTFNIMIGAL 664



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 219/424 (51%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P++ T+
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTY 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            IL+   C  GR+  GF  LG +++  F  +A+ FT ++KGLCA+ R  +A  +  +   
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+ GLC    +  AL L + M +  G+    C P+ V+Y T+I+G  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFF 210

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +DKA   + +M D  I P+VVTY+S+I   C A   ++A  +   M+  GV P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +V
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR+  +  DT TY   I  LCKSG V +A+  F  + D +     + YN L
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 505 IDGL 508
           I  L
Sbjct: 451 IHSL 454



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 222/435 (51%), Gaps = 18/435 (4%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           SSGQ       P EA+    ++ +MH     P V ++N L   L KN        +F  +
Sbjct: 281 SSGQ-------PKEAI---GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
              GL P+I T+  L+  +   G +     +L  ++R+   PN   F+ LI     + ++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            +A  +F+K R     PD  TY T+I  LC++G    A+  FE+M +          P  
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER------LSPGN 444

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           + YN++I  LC     DKAKEL L+M D  I  D + + S+I   C      E+++LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  GV+PD++T+S ++D  C  GKMD+A++LL  M+  G+ P+  TYNTLI+GYC   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN 
Sbjct: 565 MEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNI 624

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL + +  + AL++F  +    +  +T T+N  I  L K G   EA +LF A+  + 
Sbjct: 625 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684

Query: 494 YELNIVSYNCLIDGL 508
              ++ +Y+ + + L
Sbjct: 685 LVPDVRTYSLMAENL 699



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 195/420 (46%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 361 LLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV        +++    +P  + + SLI  LC   +  +A  L  +        
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 531

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + PD VTY ++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C  +  D A ++F     N C+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF----QNLCL 647

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I    K    +EA  L++ + + G+ P V TY+ +   L E   +E 
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              LF  M  N   A++   N+ +  L + G +  A      I +  + L   + +  +D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 243/459 (52%), Gaps = 35/459 (7%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F+ M++   SP  +S++N +   L K +  D   ++ +++   G+
Sbjct: 229 EGDVN-----KACDLFNEMVQRGISPD-LSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD +T++ LI  +   G+      V  ++      P+ VT  SL+  LC   +I +A  
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-----ANGNGEFGVVCK--- 250
           +F    +   + D+F+Y  ++NG    G  +    LF  M     A  +  F V+ K   
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 251 ---------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
                                P+ VTY+T+I  LC+ G +D A E F +M D+ + P + 
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  +I+GFC   D  +AK L ++MM++G++PD+  F+ I++ LCK G++  A  + +  
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFT 522

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G++PN   YNTL+DGYCL  K+++A ++F  M S G   +VV Y TL+N YCK   +
Sbjct: 523 ISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRI 582

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           +E LSL+ E+L KGIKP+   YN +  GLF+  +   A   F EM  + +A D YTY+  
Sbjct: 583 DEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIV 642

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + GL K+    EA+ LF+ +     +++I + N +I G+
Sbjct: 643 LGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGM 681



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/434 (31%), Positives = 218/434 (50%), Gaps = 19/434 (4%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG-- 137
           P EA  +FD +L    +P P    N     LA+              ++LF R++ A   
Sbjct: 43  PEEAHDLFDELLH-QATPVPGRQLNGFLAALARAPASAACRDGPALAVALFNRVSRAHGP 101

Query: 138 --LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
             L P ++T+ IL++C  +  R        G++L++    + +  ++L++GLC   R  E
Sbjct: 102 RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAE 161

Query: 196 AAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
           A  +   HR+    C PDVF+Y  ++  LC    +  A  L   MA G    G VC PN 
Sbjct: 162 ALDILL-HRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG----GAVCLPNA 216

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V YNT+IDG  KEG V+KA +LF +M    I+PD+ TY  V+   C A   ++A+ +  +
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+D+GV PD  T++ ++      G+  +A R+ + M  +G+ P+  T N+L+   C   K
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           I  AR +F SM   G   D+ SY  ++N Y     + +   L++ MLS GI P    +N 
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L     +   ++RA  +F+EMR   V  D  TY+  I  LC+ G + +A+E F  + D  
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456

Query: 494 YELNIVSYNCLIDG 507
              +I +Y+ LI G
Sbjct: 457 VAPSISTYHFLIQG 470



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 219/431 (50%), Gaps = 18/431 (4%)

Query: 87  PNEALCIFDYMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           P  A+ +F+ + R H      P + ++ IL  C  +       L+ F ++   GL  D  
Sbjct: 85  PALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTI 144

Query: 144 THSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
             S L+   C+  R +    ++L R+      P+  ++  ++K LC++ +  +A  L   
Sbjct: 145 MISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELL-- 202

Query: 203 HRVFA-----CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            R+ A     C P+   YNT+I+G  + G    A +LF EM     + G+   P+  TYN
Sbjct: 203 -RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV----QRGI--SPDLSTYN 255

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +++ LCK   +DKA+ +  +M D+ + PD  TY S+I G+     W EA R+  +M  Q
Sbjct: 256 CVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQ 315

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ PDVVT + +M  LCK+GK+  A  + + M  +G   + ++Y  +++GY     +   
Sbjct: 316 GILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDL 375

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            +LF  M S+G   D   +N LI  Y K   ++ A  +++EM  +G++P VVTY+T+   
Sbjct: 376 TELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAA 435

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L  I +++ A++ F++M    VA    TY+  I G C  G +L+A +L   + +     +
Sbjct: 436 LCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495

Query: 498 IVSYNCLIDGL 508
           I  +N +I+ L
Sbjct: 496 IGCFNFIINNL 506



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 219/457 (47%), Gaps = 23/457 (5%)

Query: 47  TTTSKLKESLRLTVK--------DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R++ K        D  +L   +   CK    G I      +A  +FD M 
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK---HGKIK-----DARDVFDSM- 347

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M      + S+ I+    A       +  LF  + S G+ PD +  ++LI  + K G +
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGML 407

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT++++I  LC   ++ +A   F +       P + TY+ L
Sbjct: 408 DRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A +L  +M N         +P+   +N II+ LCK G V  A+ +F  
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKG------MRPDIGCFNFIINNLCKLGRVMDAQNIFDF 521

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
                ++P+V+ Y +++ G+C       A R+F  M+  G+QP+VV +  +++  CK G+
Sbjct: 522 TISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGR 581

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   ++ +G+ P+T  YN ++ G     +   A+  F  M  +G   D  +Y+ 
Sbjct: 582 IDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSI 641

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN   +EA+ L+ E+ +  +K  + T N +  G+F+I +VE A  LF  + R+ 
Sbjct: 642 VLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSG 701

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           +     TY+  +  L K G V EA ++F ++ ++  E
Sbjct: 702 LVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 201/424 (47%), Gaps = 10/424 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P   L  F  +L+       +   N+L G     +  + +  L  R+   G  PD++++ 
Sbjct: 124 PKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYC 183

Query: 147 ILINCFC---KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           I++   C   K G+      ++      C  PNAV + ++I G   E  + +A  LF + 
Sbjct: 184 IVLKSLCSDRKSGQADELLRMMAEGGAVCL-PNAVAYNTVIDGFFKEGDVNKACDLFNEM 242

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 PD+ TYN ++N LC+      A  +  +M +     GV+  P+  TYN++I G 
Sbjct: 243 VQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK----GVL--PDNWTYNSLIYGY 296

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
              G   +A  +  KM  + I PDVVT  S++   C      +A+ +F  M  +G + D+
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI 356

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            ++ ++++     G +   + L  LM+  G+ P+++ +N LI  Y     +D A  +F  
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   DVV+Y+T+I   C+   +++A+  +++M+ +G+ P++ TY+ L  G      
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           + +A  L  +M    +  D   +N  I+ LCK G V++A  +F          N++ YN 
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536

Query: 504 LIDG 507
           L+DG
Sbjct: 537 LMDG 540


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 228/424 (53%), Gaps = 10/424 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
            +AL  F+ M       P   ++N++   L K +       + K + +   + PD+ T+S
Sbjct: 24  KQALACFEKMREF--VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYS 81

Query: 147 ILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            +IN FCK G +     +L  ++ R    P+ VT+TS++ GLC + ++  A  +  + ++
Sbjct: 82  TVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKL 141

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              EPD FT++ LI G C       AL L++E+   +       KP+ VTY  +IDG CK
Sbjct: 142 KGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS-----WKPDVVTYTALIDGFCK 196

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G ++KA ++   M+     P+VVTY+S++ G C A D ++A  LF  M  +G  P+VVT
Sbjct: 197 SGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVT 256

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LC   K+D A  L++ M      P+T +YN L+DGYC   +I+ A++LF  M 
Sbjct: 257 YTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMA 316

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM-LSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  C+ D ++Y  L+  +C    +EEA  L   M  + GI P VVTY+ +  G     + 
Sbjct: 317 TKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRF 376

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A +   EM   +VA +  TY++ IDGLCK+G V  A+E+ + + + + E ++ ++N +
Sbjct: 377 VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSV 436

Query: 505 IDGL 508
           I  L
Sbjct: 437 IGAL 440



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 192/335 (57%), Gaps = 8/335 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P  VT+T +I G C  +++ +A A F K R F   P+  TYN ++NGLC+   T  A  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREFV-APNERTYNVVVNGLCKARLTSKAYEV 63

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTS 293
            +EM +G         P+ VTY+T+I+G CK+G +D+A E+  +M   + I PDVVTYTS
Sbjct: 64  LKEMRDGKS-----VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL-ELMIWR 352
           V+ G C     + A  +  EM  +GV+PD  TFS ++   C   K+D+A +L  E++   
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
              P+  TY  LIDG+C +  ++ A K+   ME   C+ +VV+Y++L++  CK  D+++A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L L+  M SKG  P VVTY TL  GL   H+V+ A  L DEM       DT +YN  +DG
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            C+ G + EA +LF+ +       + ++Y CL+ G
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 225/421 (53%), Gaps = 17/421 (4%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR-LNSAGLFPDIYTHSILINCFCKMG 156
           +++    P   +F+ L       +  D  L L+K  L S+   PD+ T++ LI+ FCK G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            +     +LG +      PN VT++SL+ GLC    + +A  LF +     C P+V TY 
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TLI+GLC       A  L +EM          C P+TV+YN ++DG C+ G +++AK+LF
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMT------ATCCPPDTVSYNALLDGYCRLGRIEEAKQLF 312

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD--QGVQPDVVTFSVIMDELC 334
            +M  ++  PD +TYT ++RGFC A+   EA R  +E M    G+ PDVVT+S+++    
Sbjct: 313 KEMATKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVVTYSIVVAGYS 371

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           +  +  +A+  ++ MI R V PN  TY++LIDG C   ++DHA ++  +M +      V 
Sbjct: 372 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVG 431

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           ++N++I   C+  D++EA  L   M + G++P +VTY TL  G     ++E A +LF+ M
Sbjct: 432 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 491

Query: 455 RRNHVAADT-------YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           R+    + +         ++  I GLCK+  + +A+ +   +R  + E        ++DG
Sbjct: 492 RKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDG 551

Query: 508 L 508
           L
Sbjct: 552 L 552



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 207/410 (50%), Gaps = 14/410 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL ++  +L      P V ++  L     K+ + +  + +   +      P++ T+S 
Sbjct: 165 DEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSS 224

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK G +     +  R+      PN VT+T+LI GLCA  ++  A  L  +     
Sbjct: 225 LLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 284

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD  +YN L++G CR G    A  LF+EMA  +      C P+ +TY  ++ G C   
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS------CLPDRITYTCLVRGFCNAS 338

Query: 268 FVDKAKELFLKMKD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            +++A+ L   MK    I+PDVVTY+ V+ G+  A  + EA     EM+ + V P+ VT+
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++D LCK G++D A  +L+ M+ + V P+  T+N++I   C    +D A KL V+M +
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV-------TYNTLFLGLF 439
           +G    +V+Y TL+  + +   +E A  L+  M  K  K +          ++ L  GL 
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLC 518

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +  ++++A+ + +E+R              +DGL ++G   EA +L  +I
Sbjct: 519 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 147/356 (41%), Gaps = 72/356 (20%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K    D  L LF+R+ S G  P++ T++ LI+  C   +V    ++
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +  +C  P+ V++ +L+ G C   RI EA  LF +    +C PD  TY  L+ G C 
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN 336

Query: 225 TGHTIVALNLFEEMANGNG------EFGVVCK------------------------PNTV 254
                 A  L E M    G       + +V                          PN V
Sbjct: 337 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 396

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY+++IDGLCK G VD A E+   M ++ + P V T+ SVI   C   D +EA +L + M
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 456

Query: 315 MDQGVQPDVVT------------------------------------------FSVIMDE 332
              G++P +VT                                          FS ++  
Sbjct: 457 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRG 516

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           LCK  ++DKA  ++E +  R   P       ++DG     + + A KL  S+   G
Sbjct: 517 LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 223/411 (54%), Gaps = 8/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P V  +N+L G L + K       +F  + +  L   I T++ LI+ +CK+G 
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   F +  R+      PN +TF SL+ GLC   ++ EA +L  +  V    PD +TY+ 
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L +GL R      A+ L+E+      E G+  + N  T + +++GLCK+G V+KA+E+  
Sbjct: 322 LFDGLLRCDDGNGAMELYEQAT----EKGI--RINNYTGSILLNGLCKQGKVEKAEEILK 375

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKN 336
           K  +  +  D V Y + + G+C   D N+A  L IE M+  G++P+ +TF+ ++D+ C  
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAI-LTIERMESFGLRPNSITFNSLIDKFCDM 434

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            +MDKA   ++ M  +GV P+  TYNTLIDGY      D   ++   ME  G   +VVSY
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSY 494

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            +LIN  CK+  + EA  +  +M+ +G+ P    YN L  G   + +V+ AL+ FDEM R
Sbjct: 495 GSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMR 554

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + ++    TYN  IDGLCK G + EA +    I  S +  ++++YN LI G
Sbjct: 555 SEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 202/405 (49%), Gaps = 15/405 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L   L K +      SL K +   G  PD YT+SIL +   +    +    +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +        N  T + L+ GLC + ++ +A  +  K        D   YNT +NG CR
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+   E M +    FG+  +PN++T+N++ID  C    +DKA+E   KM ++ +
Sbjct: 399 IGDMNKAILTIERMES----FGL--RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V TY ++I G+     ++   ++  +M + GV+P+VV++  +++ LCK+GK+ +A  
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  MI RGV PN   YN LIDG C+  K+  A + F  M  +     +V+YN LI+  C
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA    +++ S G  P V+TYN+L  G      V + L L++ M+   +     
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI----VSYNCLI 505
           TY+  I G  K G     +EL   + +   ++N+    V YN +I
Sbjct: 633 TYHPLISGCSKEG-----IELVEKLYNEMLQMNLLPDRVVYNAMI 672



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 194/432 (44%), Gaps = 40/432 (9%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +IL   L K    +    + K+    GL  D   ++  +N +C++G ++   + + R+  
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN++TF SLI   C    + +A     K       P V TYNTLI+G  +      
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDR 474

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
              + E+M     E GV  KPN V+Y ++I+ LCK+G + +A+ +   M    + P+   
Sbjct: 475 CFQILEQME----EIGV--KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQV 528

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G C      +A R F EMM   + P +VT++V++D LCK GK+ +A   L  + 
Sbjct: 529 YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQIT 588

Query: 351 WRGVNPNTYTYNTLIDGY----------------------------------CLTDKIDH 376
             G +P+  TYN+LI GY                                  C  + I+ 
Sbjct: 589 SSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL 648

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             KL+  M     + D V YN +I+ Y +  + ++A SL+  ML +GI P  +TYN+L L
Sbjct: 649 VEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLIL 708

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G F   ++     L + M+   +A    TY+  + G C       A   +R + ++ +  
Sbjct: 709 GHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLP 768

Query: 497 NIVSYNCLIDGL 508
           N    N L  GL
Sbjct: 769 NASICNELTAGL 780



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 175/376 (46%), Gaps = 41/376 (10%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            I  S F  +   +   I+       +          R     P+VF YN LI GLCR  
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +F+EM N N         + VTYNT+IDG CK G +D A ++  +MK++++ P
Sbjct: 226 RIRDAEKMFDEMCNIN------LVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAP 279

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--------------- 331
           +++T+ S++ G C      EA+ L  EM   G  PD  T+S++ D               
Sbjct: 280 NIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELY 339

Query: 332 --------------------ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
                                LCK GK++KA  +L+     G+  +   YNT ++GYC  
Sbjct: 340 EQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRI 399

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             ++ A      MES G   + +++N+LI+ +C  K++++A     +M  KG+ P+V TY
Sbjct: 400 GDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETY 459

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G  ++   +R  ++ ++M    V  +  +Y + I+ LCK G +LEA  + R +  
Sbjct: 460 NTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMIC 519

Query: 492 SKYELNIVSYNCLIDG 507
                N   YN LIDG
Sbjct: 520 RGVLPNAQVYNMLIDG 535



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 165/350 (47%), Gaps = 7/350 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K   +D    + +++   G+ P++ ++  LINC CK G++    +V
Sbjct: 454 PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIV 513

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PNA  +  LI G C   ++ +A   F +       P + TYN LI+GLC+
Sbjct: 514 LRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +   ++ +          P+ +TYN++I G    G V K   L+  MK+  I
Sbjct: 574 KGKLTEAEDFLTQITSSGH------SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V TY  +I G C        ++L+ EM+   + PD V ++ ++    + G   KA  
Sbjct: 628 KPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYS 686

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+ +G++P+  TYN+LI G+    K+ + + L  +M++        +Y+ L+  +C
Sbjct: 687 LHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHC 746

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
             KD   A   Y EM+     P     N L  GL +  +++    +  EM
Sbjct: 747 DLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 177/394 (44%), Gaps = 8/394 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A+   + M      P  ++ FN L       K  D      K++   G+ P + T++ 
Sbjct: 403 NKAILTIERMESFGLRPNSIT-FNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ + K+      F +L ++      PN V++ SLI  LC + +I+EA  +        
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+   YN LI+G C  G    AL  F+EM            P  VTYN +IDGLCK+G
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE------ISPTLVTYNVLIDGLCKKG 575

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A++   ++     +PDV+TY S+I G+  A + ++   L+  M + G++P V T+ 
Sbjct: 576 KLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++    K G ++   +L   M+   + P+   YN +I  Y        A  L   M   
Sbjct: 636 PLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQ 694

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN+LI  + +   +     L + M +K + P   TY+ L  G  ++     A
Sbjct: 695 GIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGA 754

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
              + EM  N+   +    N    GL + G + E
Sbjct: 755 YVWYREMVENNFLPNASICNELTAGLEQEGRLQE 788



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 161/347 (46%), Gaps = 13/347 (3%)

Query: 84  LITPNEALCIFDYMLRMHPS------PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           LI     LC FD   ++          P V S+  L  CL K+        + + +   G
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           + P+   +++LI+  C +G+V         ++RS  +P  VT+  LI GLC + ++ EA 
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
              T+       PDV TYN+LI+G    G+    L L+E M N     G+  KP   TY+
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKN----LGI--KPTVRTYH 635

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I G  KEG ++  ++L+ +M   N+ PD V Y ++I  +    +  +A  L   M+DQ
Sbjct: 636 PLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQ 694

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ PD +T++ ++    + GK+     L+  M  + + P   TY+ L+ G+C       A
Sbjct: 695 GIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGA 754

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
              +  M  N  + +    N L     +   ++E   + SEM  KGI
Sbjct: 755 YVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 207/369 (56%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ LI+ F K  ++ +   VL R+    F P+ VT+  +I   C+  ++  A  +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F +     CEP V TY  LI      G   VA+ L +EM +   E      P+T+TYN I
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE------PDTLTYNAI 249

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I G+CKE  VDKA EL   +      PD++TY  ++R       W+E ++L  EM+  G 
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P+VVT S+++  LC++GK+++A  LL  M  +G+ P+ Y Y+ LI G+C   ++D A +
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
               M S+GC+ D+V+YNT++   C+    ++AL ++ ++   G  P V +YNTLF  L+
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                 RAL++  ++    +  D  TYN+ I  LC+ G V EA+EL   ++  +Y  N+V
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 500 SYNCLIDGL 508
           SYN ++ GL
Sbjct: 490 SYNIILLGL 498



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 199/404 (49%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    +    +  R+ S G  PD+ T++I+I  FC  G++     +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+    P  +T+T LI+    +  I  A  L  +      EPD  TYN +I G+C+
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L   +++        CKP+ +TYN ++  L   G   + ++L  +M     
Sbjct: 256 EMMVDKAFELLRSLSSRG------CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVT++ +I   C      EA  L   M ++G++PD   +  ++   C+ G++D A+ 
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            LE MI  G  P+   YNT++ G C T K D A ++F  ++  GC  +V SYNTL +   
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            + D   AL +  ++L++GI P  +TYN+L   L     V+ A++L  +M+      +  
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +YN  + GLCK     +A+E+  A+ +   + N  +Y  LI+G+
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 191/385 (49%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NI+ G        D  L +F+ L      P + T++ILI      G +     +
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+ +T+ ++I+G+C E  + +A  L        C+PD+ TYN L+  L  
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G       L  EM        + CKPN VT++ +I  LC++G V++A  L   MK++ +
Sbjct: 291 RGKWSEGEKLISEM------ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   Y  +I GFC     + A      M+  G  PD+V ++ IM  LC+ GK D+A  
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E +   G  PN  +YNTL      +     A ++ + + + G   D ++YN+LI+  C
Sbjct: 405 VFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLC 464

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++  V+EA+ L  +M S   +P VV+YN + LGL ++++   A+++   M       +  
Sbjct: 465 RDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           TY   I+G+  SG   EA+EL  ++
Sbjct: 525 TYILLIEGIGFSGLRAEAMELANSL 549



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 7/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV     LI G   + +   A  + E +      +G   KP+   YN +I G  K   +
Sbjct: 102 PDVILCTKLIKGFFNSRNIGKATRVMEILE----RYG---KPDVFAYNALISGFIKANQL 154

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A  +  +MK     PDVVTY  +I  FC     + A  +F E++    +P V+T++++
Sbjct: 155 ENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTIL 214

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++    +G +D A +LL+ M+ +G+ P+T TYN +I G C    +D A +L  S+ S GC
Sbjct: 215 IEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGC 274

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D+++YN L+          E   L SEM+S G KP VVT++ L   L    +VE A+ 
Sbjct: 275 KPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVN 334

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L   M+   +  D Y Y+  I G C+ G +  A E    +       +IV+YN ++ GL
Sbjct: 335 LLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 1/210 (0%)

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A  +NE+      M+D+G  PDV+  + ++     +  + KA+R++E++   G  P+ 
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDV 138

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           + YN LI G+   +++++A ++   M+S G + DVV+YN +I  +C    ++ AL ++ E
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +L    +PTV+TY  L         ++ A+KL DEM    +  DT TYN  I G+CK   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V +A EL R++     + +I++YN L+  L
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTL 288



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +F+ +  +   PP VSS+N LF  L  +      L +  +L + G+ PD  T++ 
Sbjct: 400 DQALEVFEKLDEVG-CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNS 458

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+C C+ G V     +L  +    + PN V++  ++ GLC  +R  +A  +        
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           C+P+  TY  LI G+  +G    A+ L   +   N 
Sbjct: 519 CQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNA 554



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 43/178 (24%)

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYN-------TLINWYCKNKDVEEALSLYSEMLSKG 423
            +K+ + +K+ VS E+      V+S++        L+N  C+     E+L     M+ KG
Sbjct: 42  ANKVRNPQKVRVSAETR--QTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKG 99

Query: 424 I----------------------------------KPTVVTYNTLFLGLFEIHQVERALK 449
                                              KP V  YN L  G  + +Q+E A +
Sbjct: 100 YTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANR 159

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + D M+      D  TYN  I   C  G +  ALE+F  +     E  +++Y  LI+ 
Sbjct: 160 VLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEA 217


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 208/381 (54%), Gaps = 12/381 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K       +   +R+ + G  PD +T++ +I+ +CK+  V     +
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +   F P+ VT+ SLI GLCAE  +  A  LF + +    +PD+  YN+L+ GLC 
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + AL +  EMA    E G  C P+  TYN +I+GLCK G +  A  +      +  
Sbjct: 374 QGLILHALQVMNEMA----EEG--CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 427

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV T+ ++I G+C     + A +L   M + G+ PD +T++ +++ LCK GK+++ + 
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 487

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + MI +G +PN  TYN LI+ +C ++K++ A K+ V M   G   D VS+NTLI  +C
Sbjct: 488 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL---FLGLFEIHQVERALKLFDEMRRNHVAA 461
           +N D+E A  L+ ++  KG   T  T+NTL   F G   +H  E   K+FDEM      A
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE---KIFDEMLSKGHRA 604

Query: 462 DTYTYNNFIDGLCKSGFVLEA 482
           D+YTY   IDG CK+  V  A
Sbjct: 605 DSYTYRVLIDGSCKTANVDRA 625



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 224/418 (53%), Gaps = 8/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD ML  H  P  +++FN +   L K         L  ++   G+  +++T++I
Sbjct: 169 HDARQLFDQMLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   C+ GR+    V L   +R+   P+ VT+ +LI+GLC +S   EA     +     
Sbjct: 228 WIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD FTYNT+I+G C+      A  L ++        G V  P+ VTY ++I+GLC EG
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQVTYCSLINGLCAEG 340

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ELF + + + I PD+V Y S+++G C       A ++  EM ++G  PD+ T++
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LCK G +  A+ ++   I +G  P+ +T+NTLIDGYC   K+D A +L   M   
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN+++N  CK   V E    + EM+ KG  P  +TYN L       +++E A
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            K+  +M +  +  D  ++N  I G C++G +  A  LF+ + +  Y     ++N LI
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 38/434 (8%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC---------- 153
           PP   ++N +   L    ++D    ++ R+ +AG+ PD++TH+I +  FC          
Sbjct: 83  PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALR 142

Query: 154 ------KMGRVSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCAESR 192
                   G V++  VV G               ++L +   PN   F  ++  LC    
Sbjct: 143 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 202

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           ++EA  L  K        ++FTYN  I GLC  G    A+ L + M            P+
Sbjct: 203 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR-------AYAVPD 255

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYNT+I GLCK+    +A     +M ++   PD  TY ++I G+C  +   EA  L  
Sbjct: 256 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 315

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           + + +G  PD VT+  +++ LC  G +++A  L      +G+ P+   YN+L+ G CL  
Sbjct: 316 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 375

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            I HA ++   M   GC  D+ +YN +IN  CK  ++ +A  + ++ + KG  P V T+N
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G  +  +++ AL+L + M    +A DT TYN+ ++GLCK+G V E  E F+ +   
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495

Query: 493 KYELNIVSYNCLID 506
               N ++YN LI+
Sbjct: 496 GCHPNPITYNILIE 509



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L      +  L LF    + G+ PDI  ++ L+   C  G + H   V
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      P+  T+  +I GLC    I +A  +     +    PDVFT+NTLI+G C+
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L E M     E+G+   P+T+TYN++++GLCK G V++  E F +M  +  
Sbjct: 444 RLKLDSALQLVERM----WEYGIA--PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 497

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+ +TY  +I  FC +N   EA ++ ++M  +G+ PD V+F+ ++   C+NG ++ A  
Sbjct: 498 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 557

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + +  +G +    T+NTLI  +     +  A K+F  M S G   D  +Y  LI+  C
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K  +V+ A     EM+ KG  P++ T+  +   L   H+V +A+ +   M
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 667



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 9/360 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L         L +   +   G  PDI T++I+IN  CKMG +S   VV
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +   + P+  TF +LI G C   ++  A  L  +   +   PD  TYN+++NGLC+
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G        F+EM          C PN +TYN +I+  C+   +++A ++ +KM  E +
Sbjct: 479 AGKVNEVNETFQEMILKG------CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD V++ ++I GFC   D   A  LF ++ ++G      TF+ ++        M  A +
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+ +G   ++YTY  LIDG C T  +D A    V M   G +  + ++  +IN   
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            N  V +A+ +   M+  G+ P VV      L   +       + + D M++ H++  TY
Sbjct: 653 VNHRVFQAVGIIHIMVKIGVVPEVV---DTILNADKKEIAAPKILVEDLMKKGHISYPTY 709



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 184/402 (45%), Gaps = 31/402 (7%)

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           RL+ A + P +Y  SI    + + GR+        R+      P A  + +++  L   +
Sbjct: 44  RLSPATIHP-LYVASI--RAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 100

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG---VV 248
              +A  ++ +       PD+ T+   +   C T    +AL L   + +  G      VV
Sbjct: 101 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH-RGAVAYCTVV 159

Query: 249 CK-----------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           C                        PN   +N ++  LCK G V +A  L  K+    ++
Sbjct: 160 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 219

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            ++ TY   IRG C A    EA RL   M    V PDVVT++ ++  LCK     +A   
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 278

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L  M+ +G  P+ +TYNT+IDGYC    +  A +L       G + D V+Y +LIN  C 
Sbjct: 279 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 338

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             DVE AL L++E  +KGIKP +V YN+L  GL     +  AL++ +EM       D  T
Sbjct: 339 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 398

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I+GLCK G + +A  +        Y  ++ ++N LIDG
Sbjct: 399 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 71/359 (19%)

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           Y   I    R G    A++ FE M          C P    YN I+D L    + D+A +
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDL------FACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 275 LFLKMKDENINPDVVTYTSVIRGFC------------------------------YANDW 304
           ++++M    ++PD+ T+T  +R FC                              YA+  
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 167

Query: 305 -NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            ++A++LF +M+   V P++  F+ ++  LCK G + +A  LL  +I RG++ N +TYN 
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 364 LIDGYCLTDKIDHARKLFVSMES----------------------------------NGC 389
            I G C   ++  A +L   M +                                   GC
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D  +YNT+I+ YCK   V+EA  L  + + KG  P  VTY +L  GL     VERAL+
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LF+E +   +  D   YN+ + GLC  G +L AL++   + +     +I +YN +I+GL
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  247 bits (631), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 149/455 (32%), Positives = 235/455 (51%), Gaps = 24/455 (5%)

Query: 68  KFLKERCKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAK 119
           KF   R  S    D N++  +         AL IF   +      P + ++N +   L K
Sbjct: 34  KFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 93

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
           +      + LF+ L   G  PD+ T++ LI+  CK G +     + G +      PN VT
Sbjct: 94  SNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVT 153

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCRTGHTIVALNLFEE 237
           ++ LI GLC   RI EA  L  +    +C+  P++ TYN+ ++GLC+   T  A  L   
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN----PDVVTYTS 293
           + +G+    +   P+TVT++T+IDGLCK G  D+A        D+ I     P+VVTY +
Sbjct: 214 LRDGS----LRVSPDTVTFSTLIDGLCKCGQTDEA------CNDDMIAGGYVPNVVTYNA 263

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++ G C A+    A  +   M+D+GV PDV+T+SV++D  CK  ++D+A  LL  M  RG
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             PN  T+N++IDG C +D+   A ++ + + +   + D V++N LI   CK  + E+A 
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           +L+ EM++K ++P V+T+  L  GL +  QVE A  + D M    V  +  TYN  + GL
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CKSG + E  E    +  S      ++Y  L+  L
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYAL 478



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 219/408 (53%), Gaps = 12/408 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K    +    L   ++S G  P++ T+S+LIN  CK+GR+     +
Sbjct: 114 PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 173

Query: 165 LGRILR-SC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHR--VFACEPDVFTYNTLIN 220
           +  + R SC   PN +T+ S + GLC +S   EA  L    R       PD  T++TLI+
Sbjct: 174 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 233

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G T  A N  ++M  G    G V  PN VTYN +++GLCK   +++A  +   M 
Sbjct: 234 GLCKCGQTDEACN--DDMIAG----GYV--PNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D+ + PDV+TY+ ++  FC A+  +EA  L   M  +G  P+VVTF+ I+D LCK+ +  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A ++   +  R + P+  T+N LI G C     + A  LF  M +     DV+++  LI
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  CK   VE A  +   M + G+ P VVTYN L  GL +  ++E   +  +EM  +   
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++ TY + +  LC++    +AL+L   ++   ++ + V+YN L+DGL
Sbjct: 466 PESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 202/387 (52%), Gaps = 10/387 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL--FPDIYTHSILINCFCKMGRVSHGF 162
           P + ++N     L K         L + L    L   PD  T S LI+  CK G+     
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA- 244

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
                ++   + PN VT+ +L+ GLC   ++  A A+          PDV TY+ L++  
Sbjct: 245 -CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      AL L   MA+        C PN VT+N+IIDGLCK     +A ++ L++ + 
Sbjct: 304 CKASRVDEALELLHGMASRG------CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNR 357

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD VT+  +I G C A ++ +A  LF EM+ + +QPDV+TF  ++D LCK G+++ A
Sbjct: 358 MLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAA 417

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +L+LM   GV PN  TYN L+ G C + +I+   +    M S+GC+ + ++Y +L+  
Sbjct: 418 RDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYA 477

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C+    ++AL L S++ S G  P  VTYN L  GL++  + E+A+ + +EM       D
Sbjct: 478 LCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAI 489
           ++T+     GL +SG +   +EL R +
Sbjct: 538 SFTFAACFGGLHRSGNLAGTMELLRVV 564



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 190/371 (51%), Gaps = 16/371 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F+ L   L K    D   +    + + G  P++ T++ L+N  CK  ++     +
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC- 223
           +  ++    TP+ +T++ L+   C  SR+ EA  L        C P+V T+N++I+GLC 
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340

Query: 224 --RTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
             R+G    +AL ++  M            P+ VT+N +I G CK G  ++A  LF +M 
Sbjct: 341 SDRSGEAFQIALQVYNRML----------VPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +N+ PDV+T+ ++I G C A     A+ +   M + GV P+VVT++V++  LCK+G+++
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +    LE M+  G  P + TY +L+   C   + D A +L   ++S G   D V+YN L+
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +   K+   E+A+++  EM+ KG +P   T+   F GL     +   ++L   +    + 
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGML 570

Query: 461 ADTYTYNNFID 471
            D  T ++ +D
Sbjct: 571 PDATTCSSILD 581



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 8/159 (5%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++N+L   L K+   +      + + S+G  P+  T+  L+   C+  R      
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ 489

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ ++    + P+ VT+  L+ GL    +  +A  +  +      +PD FT+     GL 
Sbjct: 490 LVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH 549

Query: 224 RTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYNTIID 261
           R+G+    + L    +A G         P+  T ++I+D
Sbjct: 550 RSGNLAGTMELLRVVLAKG-------MLPDATTCSSILD 581


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 208/381 (54%), Gaps = 12/381 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K       +   +R+ + G  PD +T++ +I+ +CK+  V     +
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +   F P+ VT+ SLI GLCAE  +  A  LF + +    +PD+  YN+L+ GLC 
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + AL +  EMA    E G  C P+  TYN +I+GLCK G +  A  +      +  
Sbjct: 373 QGLILHALQVMNEMA----EEG--CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV T+ ++I G+C     + A +L   M + G+ PD +T++ +++ LCK GK+++ + 
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 486

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + MI +G +PN  TYN LI+ +C ++K++ A K+ V M   G   D VS+NTLI  +C
Sbjct: 487 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL---FLGLFEIHQVERALKLFDEMRRNHVAA 461
           +N D+E A  L+ ++  KG   T  T+NTL   F G   +H  E   K+FDEM      A
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE---KIFDEMLSKGHRA 603

Query: 462 DTYTYNNFIDGLCKSGFVLEA 482
           D+YTY   IDG CK+  V  A
Sbjct: 604 DSYTYRVLIDGSCKTANVDRA 624



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 224/418 (53%), Gaps = 8/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD ML  H  P  +++FN +   L K         L  ++   G+  +++T++I
Sbjct: 168 HDARQLFDQMLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   C+ GR+    V L   +R+   P+ VT+ +LI+GLC +S   EA     +     
Sbjct: 227 WIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD FTYNT+I+G C+      A  L ++        G V  P+ VTY ++I+GLC EG
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQVTYCSLINGLCAEG 339

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ELF + + + I PD+V Y S+++G C       A ++  EM ++G  PD+ T++
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LCK G +  A+ ++   I +G  P+ +T+NTLIDGYC   K+D A +L   M   
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN+++N  CK   V E    + EM+ KG  P  +TYN L       +++E A
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            K+  +M +  +  D  ++N  I G C++G +  A  LF+ + +  Y     ++N LI
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 38/434 (8%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC---------- 153
           PP   ++N +   L    ++D    ++ R+ +AG+ PD++TH+I +  FC          
Sbjct: 82  PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALR 141

Query: 154 ------KMGRVSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCAESR 192
                   G V++  VV G               ++L +   PN   F  ++  LC    
Sbjct: 142 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 201

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           ++EA  L  K        ++FTYN  I GLC  G    A+ L + M            P+
Sbjct: 202 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR-------AYAVPD 254

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYNT+I GLCK+    +A     +M ++   PD  TY ++I G+C  +   EA  L  
Sbjct: 255 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 314

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           + + +G  PD VT+  +++ LC  G +++A  L      +G+ P+   YN+L+ G CL  
Sbjct: 315 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 374

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            I HA ++   M   GC  D+ +YN +IN  CK  ++ +A  + ++ + KG  P V T+N
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G  +  +++ AL+L + M    +A DT TYN+ ++GLCK+G V E  E F+ +   
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494

Query: 493 KYELNIVSYNCLID 506
               N ++YN LI+
Sbjct: 495 GCHPNPITYNILIE 508



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L      +  L LF    + G+ PDI  ++ L+   C  G + H   V
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      P+  T+  +I GLC    I +A  +     +    PDVFT+NTLI+G C+
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L E M     E+G+   P+T+TYN++++GLCK G V++  E F +M  +  
Sbjct: 443 RLKLDSALQLVERM----WEYGIA--PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 496

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+ +TY  +I  FC +N   EA ++ ++M  +G+ PD V+F+ ++   C+NG ++ A  
Sbjct: 497 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 556

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + +  +G +    T+NTLI  +     +  A K+F  M S G   D  +Y  LI+  C
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K  +V+ A     EM+ KG  P++ T+  +   L   H+V +A+ +   M
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 666



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 9/360 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L         L +   +   G  PDI T++I+IN  CKMG +S   VV
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +   + P+  TF +LI G C   ++  A  L  +   +   PD  TYN+++NGLC+
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G        F+EM          C PN +TYN +I+  C+   +++A ++ +KM  E +
Sbjct: 478 AGKVNEVNETFQEMILKG------CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD V++ ++I GFC   D   A  LF ++ ++G      TF+ ++        M  A +
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+ +G   ++YTY  LIDG C T  +D A    V M   G +  + ++  +IN   
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            N  V +A+ +   M+  G+ P VV      L   +       + + D M++ H++  TY
Sbjct: 652 VNHRVFQAVGIIHIMVKIGVVPEVV---DTILNADKKEIAAPKILVEDLMKKGHISYPTY 708



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 184/402 (45%), Gaps = 31/402 (7%)

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           RL+ A + P +Y  SI    + + GR+        R+      P A  + +++  L   +
Sbjct: 43  RLSPATIHP-LYVASI--RAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 99

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG---VV 248
              +A  ++ +       PD+ T+   +   C T    +AL L   + +  G      VV
Sbjct: 100 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH-RGAVAYCTVV 158

Query: 249 CK-----------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           C                        PN   +N ++  LCK G V +A  L  K+    ++
Sbjct: 159 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 218

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            ++ TY   IRG C A    EA RL   M    V PDVVT++ ++  LCK     +A   
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 277

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L  M+ +G  P+ +TYNT+IDGYC    +  A +L       G + D V+Y +LIN  C 
Sbjct: 278 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 337

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             DVE AL L++E  +KGIKP +V YN+L  GL     +  AL++ +EM       D  T
Sbjct: 338 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 397

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I+GLCK G + +A  +        Y  ++ ++N LIDG
Sbjct: 398 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 71/359 (19%)

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           Y   I    R G    A++ FE M          C P    YN I+D L    + D+A +
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDL------FACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 275 LFLKMKDENINPDVVTYTSVIRGFC------------------------------YANDW 304
           ++++M    ++PD+ T+T  +R FC                              YA+  
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 166

Query: 305 -NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            ++A++LF +M+   V P++  F+ ++  LCK G + +A  LL  +I RG++ N +TYN 
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 364 LIDGYCLTDKIDHARKLFVSMES----------------------------------NGC 389
            I G C   ++  A +L   M +                                   GC
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D  +YNT+I+ YCK   V+EA  L  + + KG  P  VTY +L  GL     VERAL+
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LF+E +   +  D   YN+ + GLC  G +L AL++   + +     +I +YN +I+GL
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 224/439 (51%), Gaps = 45/439 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS-------------------- 146
           VS+FN+L   L K       + + + + + GL PD  T +                    
Sbjct: 158 VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKK 217

Query: 147 ---------------ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
                          +L+N FCK GRV      +  +    F+P+ VTF SL+ G C   
Sbjct: 218 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277

Query: 192 RIMEAAAL--FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            + +A  +  F   + F  +PDV+TYN+LI+G+C+ G    A+ + ++M          C
Sbjct: 278 NVNDALDIVDFMIEKGF--DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE------C 329

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PNTVTYNT+I  LCKE  ++ A +L   +  + + PDV T+ ++I+G C + + + A  
Sbjct: 330 SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F EM ++G +PD  T+S+++D LC   ++ +A  LL+ M   G   N   YNTLIDG C
Sbjct: 390 MFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLC 449

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            + +I+ A ++F  ME  G     V+YNTLI+  CKNK VEEA  L  +M+ +G+KP   
Sbjct: 450 KSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKF 509

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN+L      +  +E+A  +   M  N    D +TY   I GLC++G V  A +L R++
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSV 569

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +     L   +YN +I  L
Sbjct: 570 QMKGIVLTPHAYNPVIQAL 588



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 207/406 (50%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L     +  + +  L +   +   G  PD+YT++ LI+  CK+G       +
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320

Query: 165 LGR-ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L + ILR C +PN VT+ +LI  LC E+ I  A  L          PDV T+NTLI GLC
Sbjct: 321 LQQMILREC-SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC 379

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            + +  +A+ +FEEM N        CKP+  TY+ +ID LC E  + +A  L  +M+   
Sbjct: 380 LSKNQDIAMEMFEEMKNKG------CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG 433

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              + V Y ++I G C +    +A+ +F +M   GV    VT++ ++D LCKN ++++AS
Sbjct: 434 CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEAS 493

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L++ MI  G+ P+ +TYN+L+  +C    I+ A  +  +M SNGC  D+ +Y TLI   
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGL 553

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+   V+ A  L   +  KGI  T   YN +   LF   + +  ++LF EM       D 
Sbjct: 554 CRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDA 613

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            T+     GLC  G  + EA++    + +        S+  L +GL
Sbjct: 614 LTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 216/441 (48%), Gaps = 43/441 (9%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           HP PP  +    L   L ++  +D++ +L K+L S+G  P+  T + LI  F     + +
Sbjct: 53  HPLPPNET----LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIEN 108

Query: 161 GFVVL---------------------------------GRILRSCFTPNAVTFTSLIKGL 187
              +L                                  +++      +  TF  LIK L
Sbjct: 109 LLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKAL 168

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C   ++  A  +  +      +PD  T+ TL+ G    G    AL + ++M       G 
Sbjct: 169 CKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM------LGY 222

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C    V+   +++G CKEG V++A    L++ +E  +PD VT+ S++ GFC   + N+A
Sbjct: 223 GCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDA 282

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +   M+++G  PDV T++ ++  +CK G+ +KA  +L+ MI R  +PNT TYNTLI  
Sbjct: 283 LDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C  ++I+ A  L   + S G + DV ++NTLI   C +K+ + A+ ++ EM +KG KP 
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             TY+ L   L    +++ AL L  EM  +  A +   YN  IDGLCKS  + +A E+F 
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +       + V+YN LIDGL
Sbjct: 463 QMELLGVSRSSVTYNTLIDGL 483



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 213/401 (53%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  + +NI    L ++     V  L  ++ + G+  D+ T ++LI   CK  ++    ++
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ +TFT+L++G   E  +  A  +  +   + C     +   L+NG C+
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL    E++    E G    P+ VT+N++++G C+ G V+ A ++   M ++  
Sbjct: 241 EGRVEEALRFVLEVS----EEGF--SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV TY S+I G C   ++ +A  +  +M+ +   P+ VT++ ++  LCK  +++ A+ 
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L  +++ +G+ P+  T+NTLI G CL+   D A ++F  M++ GC  D  +Y+ LI+  C
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             + ++EAL L  EM S G     V YNTL  GL +  ++E A ++FD+M    V+  + 
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TYN  IDGLCK+  V EA +L   +     + +  +YN L+
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 168/343 (48%), Gaps = 14/343 (4%)

Query: 172 CFTPNAVTF------TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
           C TP++ T        +L+  L   S       L  + +     P+  T+ TLI      
Sbjct: 44  CTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNF 103

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
            H I   NL + + N   E G   KP+T  YN  ++ L ++  +   + L  KM +E I 
Sbjct: 104 -HEIE--NLLKILEN---ELGF--KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIV 155

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            DV T+  +I+  C A+    A  +  EM + G++PD +TF+ +M    + G ++ A ++
Sbjct: 156 LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKM 215

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + M+  G      +   L++G+C   +++ A +  + +   G   D V++N+L+N +C+
Sbjct: 216 KKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCR 275

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             +V +AL +   M+ KG  P V TYN+L  G+ ++ + E+A+++  +M     + +T T
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YN  I  LCK   +  A +L R +       ++ ++N LI GL
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 378



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 145/344 (42%), Gaps = 79/344 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L  +K+ D  + +F+ + + G  PD +T+SILI+  C   R+    ++
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 165 LGRILRSCFTPNAV-----------------------------------TFTSLIKGLCA 189
           L  +  S    NAV                                   T+ +LI GLC 
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             R+ EA+ L  +  +   +PD FTYN+L+   CR G    A ++ + MA+ NG     C
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS-NG-----C 539

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKEL---------------------------------- 275
           +P+  TY T+I GLC+ G VD A +L                                  
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599

Query: 276 -FLKMKDENINPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            F +M +++  PD +T+  V RG C       EA    +EM+++G+ P+  +F  + + L
Sbjct: 600 LFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           C     D    L+ +++ +       T  ++I G+    K + A
Sbjct: 660 CSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFNDA 701


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 245/498 (49%), Gaps = 78/498 (15%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A+ +F  +LR +P+PP +  F  + G L K+KHY TVLSL +++   G+  +    +I
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIE-FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNI 150

Query: 148 LINCFCKMGRVSHGFVVLGR------ILRSCFTPNAVT--------------FTSLIKGL 187
           LIN FC++G +   F VL R      IL+ CF    +               F  L    
Sbjct: 151 LINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKD 210

Query: 188 CAESRIMEA----AALFTKHRVF------------------------ACEPDVFTYNTLI 219
             +SR+         L   H+ F                          EPD  T  T I
Sbjct: 211 FLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFI 270

Query: 220 NGLCRTGHTIVALNLFEE---------------MANG---NGEF-----------GVVCK 250
            G C  G    AL+  ++               + NG    GE            G + +
Sbjct: 271 KGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQ 330

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ V YNTIIDG+CK+  V+ A +L+ +   + I PDV TY ++I GFC      +A  L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F +M  + + PDV TFS+++D  CK+G + +A  +L +M+ + + P+  TY++L+DGYCL
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
            ++++ A  +F +M   G   +V SYN +IN +CK K V+EA+ L+ EM  K I P V+T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y++L  GL +  ++  AL+L DEM       D  TYN+ +D LCK   V +A+ L   ++
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 491 DSKYELNIVSYNCLIDGL 508
                 ++ +Y  L+ GL
Sbjct: 571 GQGIRPDMNTYTILVKGL 588



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 198/371 (53%), Gaps = 6/371 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PD  T +  I  FC  G++        +++   F  + V++ +LI GLC       A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L  ++     +PDV  YNT+I+G+C+  H   A +L+ E  +          P+  TY
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR------IFPDVFTY 371

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N +I G C  G +  A +LF KM  +NI PDV T++ ++ GFC   +  EAK +   MM 
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           Q ++PDVVT+S +MD  C   +++KA  +   M  RGV  N  +YN +I+G+C    +D 
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A KLF  M       DV++Y++LI+  CK+  +  AL L  EM  +G +P ++TYN++  
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L + H V++A+ L  +++   +  D  TY   + GLC+SG + +A ++F  +    Y L
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 497 NIVSYNCLIDG 507
           ++ +Y  +I G
Sbjct: 612 DVYAYTVMIQG 622



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 236/446 (52%), Gaps = 31/446 (6%)

Query: 67  KKFLKERCK-SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYD 124
           K F+K++C   S +  I    P         +L+    P  ++    + G CL    H  
Sbjct: 231 KTFIKQKCLLKSFEISIEYTPPK--------ILKNGYEPDTITLTTFIKGFCLKGQIH-- 280

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
             L    ++ + G   D  ++  LIN  CK+G       +L R       P+ V + ++I
Sbjct: 281 QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTII 340

Query: 185 KGLCAESRIMEAAALFTKH---RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            G+C +  + +A  L+++    R+F   PDVFTYN LI+G C  G    A++LF +M + 
Sbjct: 341 DGMCKDKHVNDAFDLYSEKVSKRIF---PDVFTYNALISGFCIVGKLKDAIDLFNKMTSK 397

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
           N        P+  T++ ++DG CK+G + +AK +   M  ++I PDVVTY+S++ G+C  
Sbjct: 398 N------IIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLV 451

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N+ N+A+ +F  M  +GV  +V +++++++  CK   +D+A +L + M  + + P+  TY
Sbjct: 452 NEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 511

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           ++LIDG C + +I +A +L   M   G   D+++YN++++  CK   V++A++L +++  
Sbjct: 512 SSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKG 571

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +GI+P + TY  L  GL +  ++E A K+F+++       D Y Y   I G C  G   E
Sbjct: 572 QGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 631

Query: 482 ALELFRA------IRDSK-YELNIVS 500
           AL L         I D+K YE+ I+S
Sbjct: 632 ALALLSKMEENGCIPDAKTYEIIILS 657



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   + K+KH +    L+    S  +FPD++T++ LI+ FC +G++     +
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++      P+  TF+ L+ G C +  I EA  +       + +PDV TY++L++G C 
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F  M++     GV    N  +YN +I+G CK   VD+A +LF +M  + I
Sbjct: 451 VNEVNKAESIFNTMSHR----GVT--ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI 504

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TY+S+I G C +   + A  L  EM  +G QPD++T++ I+D LCK   +DKA  
Sbjct: 505 FPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAIT 564

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +  +G+ P+  TY  L+ G C + K++ ARK+F  +   G   DV +Y  +I  +C
Sbjct: 565 LLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFC 624

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
                +EAL+L S+M   G  P   TY  + L LFE  + + A KL  EM
Sbjct: 625 DKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 171/320 (53%), Gaps = 6/320 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L             + LF ++ S  + PD+YT SIL++ FCK G +     V
Sbjct: 366 PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNV 425

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    P+ VT++SL+ G C  + + +A ++F          +V +YN +ING C+
Sbjct: 426 LAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCK 485

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ LF+EM +          P+ +TY+++IDGLCK G +  A EL  +M     
Sbjct: 486 IKMVDEAMKLFKEMHHKQ------IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ 539

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD++TY S++   C  +  ++A  L  ++  QG++PD+ T+++++  LC++GK++ A +
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E ++ +G N + Y Y  +I G+C     D A  L   ME NGC+ D  +Y  +I    
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659

Query: 405 KNKDVEEALSLYSEMLSKGI 424
           +  + + A  L  EM+ +G+
Sbjct: 660 EKDENDMAEKLLREMIMRGL 679


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/421 (33%), Positives = 230/421 (54%), Gaps = 8/421 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAK-NKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL I D + +++   P V S+N +   + +  K       +++ + ++G+  ++++++I
Sbjct: 150 KALNIVD-LAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNI 208

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +  G      + R+   PN VT+ ++I   C   RI EA  L     +  
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP++ TYN +INGLCR G       +  EM            P+ VTYNT+++G CK G
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG------FAPDGVTYNTLVNGYCKVG 322

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A  L  +M    + PDVVTYTS+I   C A + N A   F +M  +G++P+ VT++
Sbjct: 323 NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYT 382

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++   + G MD+A R+ + MI  G  P   TYN L++G+C++ +++ A  L   ME  
Sbjct: 383 SLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGK 442

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DVVSY+T+I  +C+ ++++ A  + +EM+ KG+ P  +TY++L  GL E  ++  A
Sbjct: 443 GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF EM    +  D +TY + I+G CK G + EAL L   +    +  + V+YN LI+G
Sbjct: 503 CDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562

Query: 508 L 508
           L
Sbjct: 563 L 563



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 213/400 (53%), Gaps = 6/400 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+NIL        + +  L  F+ +      P++ T++ +I  +CK+ R+   F +L 
Sbjct: 203 VFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLR 262

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN +T+  +I GLC   RI E + +  +       PD  TYNTL+NG C+ G
Sbjct: 263 SMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVG 322

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   AL L  EM   NG       P+ VTY ++I+ +CK G +++A E F +M    + P
Sbjct: 323 NFHQALVLHSEMLR-NG-----LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + VTYTS+I GF      +EA R++ EM+  G  P +VT++ +++  C +G+M++A  LL
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G++P+  +Y+T+I G+C   ++D A ++   M   G   D ++Y++LI   C+ 
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           + + EA  L+ EML+K + P   TY +L  G  +   +  AL L DEM +     DT TY
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTY 556

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           N  I+GL K     EA  L   +   +   N ++Y+ LI+
Sbjct: 557 NVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE 596



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 223/455 (49%), Gaps = 58/455 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N + G   K K  D    L + +   GL P++ T++++IN  C++GR+     V
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R  F P+ VT+ +L+ G C      +A  L ++       PDV TY +LIN +C+
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G+   A+  F++M   G        +PN VTY ++I+G  ++GF+D+A  ++ +M    
Sbjct: 356 AGNLNRAMEFFDQMHVRG-------LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P +VTY +++ G C +    EA  L   M  +G+ PDVV++S I+   C+  ++D+A 
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++   M+ +GV+P+  TY++LI G C   +++ A  LF  M +   + D  +Y +LIN Y
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA----LKLF-DEMRRNH 458
           CK  D+ EAL+L+ EM+ KG  P  VTYN L  GL +  +   A    LKLF DE   N 
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588

Query: 459 VAADTY---------------------------------------------TYNNFIDGL 473
           +  DT                                               YN  I G 
Sbjct: 589 ITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGH 648

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C+ G V +A +L++ + D  +  + V+   L+  L
Sbjct: 649 CRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 212/423 (50%), Gaps = 38/423 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +   MLR +  PP V ++  L   + K  + +  +  F +++  GL P+  T++ 
Sbjct: 325 HQALVLHSEMLR-NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN F + G +   + +   ++RS F P  VT+ +L+ G C   R+ EA  L        
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+T+I G CR      A  +  EM     E GV   P+ +TY+++I GLC++ 
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV----EKGV--SPDAITYSSLIQGLCEQR 497

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A +LF +M ++++ PD  TYTS+I G+C   D NEA  L  EM+ +G  PD VT++
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTD 372
           V+++ L K  +  +A RLL  + +    PN  TY+TLI+               G+C+  
Sbjct: 558 VLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            ++ A ++F SM       +   YN +I+ +C++ +V +A  LY EM+  G  P  VT  
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTII 677

Query: 433 TLFLGLFE----------IHQVERALKLFDE------MRRNHVAADTYTYNNFIDGLCKS 476
            L   L+           I  + R+ KL D       ++ NH   +     N +  + K 
Sbjct: 678 ALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKD 737

Query: 477 GFV 479
           GF+
Sbjct: 738 GFL 740



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 182/357 (50%), Gaps = 26/357 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  I+D M+R    PP + ++N L      +   +  + L + +   GL PD+ ++S 
Sbjct: 395 DEAYRIWDEMIR-SGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I  FC+   +   F +   ++    +P+A+T++SLI+GLC + R+ EA  LF +    +
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD FTY +LING C+ G    ALNL +EM       G +  P+TVTYN +I+GL K+ 
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKK----GFL--PDTVTYNVLINGLNKQA 567

Query: 268 FVDKAKELFLKM-KDENINPDVVTY---------------TSVIRGFCYANDWNEAKRLF 311
              +AK L LK+  DE+I P+ +TY                ++I+GFC     NEA ++F
Sbjct: 568 RTREAKRLLLKLFYDESI-PNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVF 626

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M+ +  +P+   ++VI+   C++G + KA +L + M+  G  P+T T   L+     +
Sbjct: 627 ESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKA-LYS 685

Query: 372 DKIDHARKLFVSMESNGC-MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           + +D    L +      C + D      L+    K  +++   +L +EM   G  P+
Sbjct: 686 EGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 3/255 (1%)

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENI--NPDVVTYTSVIRGFCYANDWNEAKRLFI 312
           T   +   L +    +K    F  +KD     N     +  V++   Y N   +A  +  
Sbjct: 97  TAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVD 156

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGK-MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
                G  P V++++ I+D + +  K +  A ++   MI  GV+ N ++YN LI G+C  
Sbjct: 157 LAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAA 216

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             ++   + F  ME N C+ +VV+YNT+I  YCK K ++EA  L   M  +G++P ++TY
Sbjct: 217 GNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTY 276

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N +  GL  + ++E    +  EM R   A D  TYN  ++G CK G   +AL L   +  
Sbjct: 277 NMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLR 336

Query: 492 SKYELNIVSYNCLID 506
           +    ++V+Y  LI+
Sbjct: 337 NGLPPDVVTYTSLIN 351


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/478 (33%), Positives = 239/478 (50%), Gaps = 62/478 (12%)

Query: 59  TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLA 118
           T++DRA        R  S G  D        AL +FD +LR     P + S N     +A
Sbjct: 22  TIQDRA--------RVGSGGAED--------ALDVFDELLRRGIGAP-IRSLNGALADVA 64

Query: 119 KNKHYDTVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           ++     V S F R+  AG   + P ++T+ ILI C C  GR+  GF  LG +++  F  
Sbjct: 65  RDNPAAAV-SRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRV 123

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNL 234
             + F  L+KGLCA+ R  +A  +  +     +C P+VF++  ++ GLC    +  AL L
Sbjct: 124 EPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALEL 183

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV----- 289
              MA+  G     C PN V+Y+T+IDGL K G  DKA   + +M D  I P+VV     
Sbjct: 184 LHMMADDGGG----CLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSI 239

Query: 290 ------------------------------TYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
                                         TYTS++ GFC +    EA +   +M   GV
Sbjct: 240 IAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P+VVT+S  MD LCKNG+  +A ++ + M+ RG+ P+  TY++L+ GY +   +     
Sbjct: 300 EPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHG 359

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF  M  +    D   +NTLI    K   V+EA+ ++S+M  +G+KP  VTY+TL  G  
Sbjct: 360 LFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYC 419

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYEL 496
           +I ++E AL LF EM  N V+ +  TYN  + GL ++G    A E + + I+  K +L
Sbjct: 420 KITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGKKDL 477



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 30/203 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++     L KN        +F  +   GL PDI T+S L++ +   G +     +
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++S   P+   F +LI     + ++ EA  +F+K R    +P+  TY+TLING C+
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCK 420

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK------ 278
                 AL LF+EM + NG       PN +TYN ++ GL + G    AKE +++      
Sbjct: 421 ITRMENALALFQEMVS-NG-----VSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGK 474

Query: 279 ------------------MKDEN 283
                             M+D +
Sbjct: 475 KDLIEQGLLEELDDLFLSMEDND 497


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/412 (34%), Positives = 226/412 (54%), Gaps = 14/412 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDIYTHSILINCFCKMGRVSHGF 162
           P V S+N L   L K + +     L + + S G    PD+ T+S L++ +CK G+V    
Sbjct: 43  PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESR 102

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  ++     P+A+ +T ++  LC  +R+ EA  L  +     C P + T+NTLI+G 
Sbjct: 103 ELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR  +  +A +L ++MA      GV  K + VTYNT++DGLCK G + +A++L  +MK  
Sbjct: 163 CREKNLEMADSLLQKMAAS----GV--KADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              PDVV Y+S + G C +    +A ++  +M D    P+VVT++ I+D LCK+GK+D A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA 276

Query: 343 SRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
             ++E M    G   N   Y+T++DG C   +   AR +  +M   GC  DVV+Y++L+N
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   +EEA+    EM  +G KP  VTY +L  GL    ++  A ++ +EM       
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 462 -----DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                   TYN  I GLCK+G + +AL+ F+ +R    + + VSY+ +++GL
Sbjct: 397 HHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 208/409 (50%), Gaps = 22/409 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D + R   S P + +++ L     K    +    L K + S GL PD   ++ ++   
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK  R+     +L  ++R+   P  +TF +LI G C E  +  A +L  K      + DV
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
            TYNTL++GLC+ G    A  L E M A+G       C P+ V Y++ + GLCK G V  
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASG-------CAPDVVAYSSFVYGLCKSGKVLD 240

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-----GVQPDVVTF 326
           A ++  +M+D + +P+VVTY +++ G C +   + A    +EMM+Q     G   +VV +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGY 296

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++D LCK G+  +A  ++E M   G  P+  TY++L++G C   KI+ A +    M  
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-----PTVVTYNTLFLGLFEI 441
            GC  + V+Y +L++  C    + EA  +  EM S G       P+V TYN L  GL + 
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKA 416

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            +++ ALK F  MR      D  +Y+  ++GL +SG  L+A  +   +R
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 171/305 (56%), Gaps = 9/305 (2%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P+  T+N L+NG  + G       L E MA  +       +PN V+YN +++GLCK 
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARD------IQPNVVSYNGLLEGLCKL 58

Query: 267 GFVDKAKELFLKM--KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
               +A+EL   M  +     PD+VTY++++ G+C A    E++ L  E++ +G++PD +
Sbjct: 59  ERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            ++ ++  LCK+ ++ +A  LLE MI  G  P   T+NTLI G C    ++ A  L   M
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            ++G   DVV+YNTL++  CK   ++EA  L   M + G  P VV Y++   GL +  +V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNIVSYNC 503
             A ++ ++MR +H   +  TYN  +DGLCKSG +  ALE+   +  S    LN+V Y+ 
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 504 LIDGL 508
           ++DGL
Sbjct: 299 VVDGL 303



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 9/379 (2%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           ++  G  P+  T + L+N F K GR      +L  +      PN V++  L++GLC   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 193 IMEAAALFTK--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  L      R     PD+ TY+TL++G C+ G    +  L +E+ +         +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG------LR 114

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ + Y  ++  LCK   + +A EL  +M      P ++T+ ++I G C   +   A  L
Sbjct: 115 PDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M   GV+ DVVT++ +MD LCK G++ +A +LLE M   G  P+   Y++ + G C 
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVV 429
           + K+  A ++   M  +    +VV+YNT+++  CK+  ++ AL +  +M S  G    VV
Sbjct: 235 SGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            Y+T+  GL ++ + + A  + + M R     D  TY++ ++GLCK+G + EA+E  R +
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + N V+Y  L+ GL
Sbjct: 355 AMEGCKPNAVTYCSLVHGL 373


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 212/434 (48%), Gaps = 31/434 (7%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP VS+FNIL   L K       + + + + + GL PD  T + L+  F +   V     
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   ++ S     +V+   L+ GLC E RI EA     +   F   PD  T+N L+NGLC
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFC--PDQVTFNALVNGLC 313

Query: 224 RTGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTV 254
           RTGH    L + + M     E  V                              C+PNTV
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TYNT+I  LCKE  V+ A EL   +  + + PDV T+ S+I+G C  ++   A  LF EM
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            ++G  PD  T+S++++ LC   ++ +A  LL+ M   G   N   YNTLIDG C  +++
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  +F  ME  G     V+YNTLIN  CK+K VEEA  L  +M+ +G+KP   TY T+
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                +   ++RA  +   M  N    D  TY   I GLCK+G V  A +L R+++    
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613

Query: 495 ELNIVSYNCLIDGL 508
            L   +YN +I  L
Sbjct: 614 VLTPQAYNPVIQAL 627



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 193/388 (49%), Gaps = 14/388 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L   L +  H    L +   +   G   D+YT++ LI+  CK+G +     +
Sbjct: 300 PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN VT+ +LI  LC E+ +  A  L          PDV T+N+LI GLC 
Sbjct: 360 LHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCL 419

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +  +A+ LFEEM          C P+  TY+ +I+ LC E  + +A  L  +M+    
Sbjct: 420 TSNREIAMELFEEMKEKG------CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +VV Y ++I G C  N   +A+ +F +M   GV    VT++ +++ LCK+ ++++A++
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ MI  G+ P+ +TY T++  +C    I  A  +  +M  NGC  D+V+Y TLI   C
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V+ A  L   +  KG+  T   YN +   L +  + + A++LF EM       D  
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVI 653

Query: 465 TYNNFIDGLCKSG--------FVLEALE 484
           TY     GLC  G        F +E LE
Sbjct: 654 TYKIVFRGLCNGGGPIQEAVDFTVEMLE 681



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 198/407 (48%), Gaps = 10/407 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ I  +M+     P  V+ +N L G L K  H +    L + L S G+ PD+ T + 
Sbjct: 354 DEAVEILHHMVSRDCEPNTVT-YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNS 412

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C          +   +      P+  T++ LI+ LC+E R+ EA  L  +  +  
Sbjct: 413 LIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C  +V  YNTLI+GLC+      A ++F++M       GV    ++VTYNT+I+GLCK  
Sbjct: 473 CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEM----LGV--SRSSVTYNTLINGLCKSK 526

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A +L  +M  E + PD  TYT++++ FC   D   A  +   M   G +PD+VT+ 
Sbjct: 527 RVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYG 586

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK G++D AS+LL  +  +G+      YN +I   C   +   A +LF  M   
Sbjct: 587 TLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646

Query: 388 GCMHDVVSYNTLINWYCKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           G   DV++Y  +    C     ++EA+    EML KGI P   ++  L  GL  +   + 
Sbjct: 647 GDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDT 706

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
            ++L + +      + + T  + I G  K     +AL    AI D K
Sbjct: 707 LIQLINMVMEKGRFSQSET--SIIRGFLKIQKFNDALANLGAILDRK 751



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 144/327 (44%), Gaps = 68/327 (20%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP+T  YN  +  L K   +   + L  KM  + + PDV T+  +IR  C A+    A  
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 310 LFIEMMDQGVQPDVVTFSVIM-----------------------------------DELC 334
           +  +M + G++PD  TF+ +M                                   + LC
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 335 KNGKMDKASR---------------------------------LLELMIWRGVNPNTYTY 361
           K G++++A R                                 +++ M+ +G   + YTY
Sbjct: 281 KEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTY 340

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N+LI G C   +ID A ++   M S  C  + V+YNTLI   CK   VE A  L   + S
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTS 400

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           KG+ P V T+N+L  GL      E A++LF+EM+      D +TY+  I+ LC    + E
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE 460

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           AL L + +  S    N+V YN LIDGL
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGL 487



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 118/235 (50%), Gaps = 3/235 (1%)

Query: 275 LFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           LFL M +D  + PD   Y   +     AN     + L  +M+   V PDV TF++++  L
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRAL 209

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  ++  A  +LE M   G+ P+  T+ TL+ G+     ++ A ++   M  +GC    
Sbjct: 210 CKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTS 269

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           VS N L+N  CK   +EEAL    E   +G  P  VT+N L  GL     +++ L++ D 
Sbjct: 270 VSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDF 327

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M       D YTYN+ I GLCK G + EA+E+   +     E N V+YN LI  L
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTL 382


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 230/434 (52%), Gaps = 29/434 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++N L   L K +  D  +++ + +   G+ PD  T++I+I  +C +G++     
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L ++  S   P+ VT++ LI+  C   R  EA ++F        +P+   Y+ L++G  
Sbjct: 292 LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 351

Query: 224 RTGHTIVALNLFEEMANGNGEFG------VVC-----------------------KPNTV 254
             G  I   +L + M      F       ++C                       +P+ V
Sbjct: 352 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 411

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           +Y+T+I  LCK G V+ A   F +M  E ++P+++++TS+I G C   +W + + L  EM
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 471

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +++G+ PD +  + IMD LCK G++ +A    +++I  GV P+  +YNTLIDGYC   K+
Sbjct: 472 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKM 531

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D + K    M S G   D  +YN+L+N Y KN  VE+AL+LY EM  K +K   +T N +
Sbjct: 532 DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIM 591

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  ++  A +L+ +M          TYN  + GLC++  V EAL +F  +R  ++
Sbjct: 592 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF 651

Query: 495 ELNIVSYNCLIDGL 508
           EL++ +++ +I+ L
Sbjct: 652 ELDVRTFSIVINAL 665



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 244/523 (46%), Gaps = 94/523 (17%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L++ +  R +S   G        +AL +FD +L     P  V +FN +   +A+     +
Sbjct: 15  LERIILNRHRSGSLG------REDALNLFDELLP-QARPASVHAFNSVLTVVARADSSSS 67

Query: 126 -------VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH-----------GF----V 163
                   +SLF  +  +G+        ILI CFC +GR+             G+    V
Sbjct: 68  PRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNV 127

Query: 164 VLGRILRSC---------------------FTPNAVTFTSLIKGLCAESRIMEAAALF-- 200
            L ++++                       +TP+  ++ +LIKGLC E +  EA  L   
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 201 -TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
            T    + C P+V +YNT+I+G  + G    A  LF EM       G    P+ VTYN++
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEM------MGQGLPPDVVTYNSL 241

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLCK   +DKA  +   M D+ + PD  TY  +IRG+C      EA RL  +M   G+
Sbjct: 242 IDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 301

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTD--- 372
           QPDVVT+S+++   CK G+  +A  + + M+ +G  PN+  Y+ L+ GY     L D   
Sbjct: 302 QPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD 361

Query: 373 ----------------------------KIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
                                        +D A   F  M  NG   DVVSY+T+I+  C
Sbjct: 362 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 421

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VE+A+  +++M+S+G+ P ++++ +L  GL  I + ++  +L  EM    +  D  
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 481

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             N  +D LCK G V+EA + F  +     + ++VSYN LIDG
Sbjct: 482 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDG 524



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 208/415 (50%), Gaps = 11/415 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+R    P    +FNIL    AK+   D  ++ F  +   GL PD+ ++S +I+  
Sbjct: 362 LLDLMIR-DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA--ESRIMEAAALFTKHRVFACEP 210
           CK GRV        +++    +PN ++FTSLI GLC+  E + +E  A    +R     P
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR--GIHP 478

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D    NT+++ LC+ G  + A + F+ + +     GV  KP+ V+YNT+IDG C  G +D
Sbjct: 479 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIH----IGV--KPDVVSYNTLIDGYCFVGKMD 532

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           ++ +   +M    + PD  TY S++ G+       +A  L+ EM  + V+   +T ++++
Sbjct: 533 ESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIML 592

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L + G++  A  L   M+ RG      TYNT++ G C    +D A ++F  + S    
Sbjct: 593 HGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFE 652

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DV +++ +IN   K   ++EA SL+S M+ +G  P V+TY+ +     E   +E +  L
Sbjct: 653 LDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNL 712

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           F  M +N  AAD++  N  +  L + G V  A      I +  + L   +   LI
Sbjct: 713 FLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 223/489 (45%), Gaps = 70/489 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ I  +M       P   ++NI+          +  + L K+++ +GL PD+ T+S+
Sbjct: 252 DKAVAILQHMFD-KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG--------------------- 186
           LI  +CK+GR +    V   ++R    PN+  +  L+ G                     
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370

Query: 187 -----------LCAESR---IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
                      +CA ++   + +A   FT+ R     PDV +Y+T+I+ LC+TG    A+
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 233 NLFEEMANGN------------------GEFGVV-----------CKPNTVTYNTIIDGL 263
             F +M +                    GE+  V             P+ +  NTI+D L
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CKEG V +A++ F  +    + PDVV+Y ++I G+C+    +E+ +    M+  G++PD 
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ +++   KNG+++ A  L   M  + V     T N ++ G     +I  AR+L++ 
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G    + +YNT++   C+N  V+EAL ++ ++ SK  +  V T++ +   L ++ +
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-----KYELNI 498
           ++ A  LF  M       D  TY+  I    + G + E+  LF ++  +      + LNI
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNI 730

Query: 499 VSYNCLIDG 507
           +    L  G
Sbjct: 731 IVRRLLEKG 739


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 216/407 (53%), Gaps = 10/407 (2%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           PS P  S++  L    ++  +   VL +   + +    PD+ TH+ ++  +C++G +   
Sbjct: 19  PSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA 78

Query: 162 FVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
                G++  S   P A T+  LI GLC   RI EA  L  +     C PD   YN LI 
Sbjct: 79  LSHFRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIA 135

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G    A N+ + M   +      C P+ +TY ++I G C+   +D+A++L  KMK
Sbjct: 136 GLCKMGKIDAARNVLKMMLERS------CVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +  + PD V Y +++ G C  N   E  +L  EM++ G +PD  +++ ++  LC++GK +
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A ++LE MI +   P+  TYN+L+DG+C   K+D A +L   M    C   V++Y TLI
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
             + +   + +A  +  +M   GI P +VTYN L  GL +  ++E A +L + M     A
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            D  TY+  ++GLCK G V +A  L   + +   + N+V++N +IDG
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDG 416



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 215/404 (53%), Gaps = 12/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    D    L + +      P + T++ LI  F +  R++  + V
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  + ++  +P+ VT+  L+ GLC   ++ EA  L        C PDV TY+ L+NGLC+
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L E M     E G  C+PN VT+NT+IDG CK G VD+  ++   MK+ + 
Sbjct: 385 LGKVDDARLLLEMML----ERG--CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC 438

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+++I G+C AN   +A  +       G+ PD  ++S +++ LC  GK+++A  
Sbjct: 439 TPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQE 492

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +++LM  +G  P +  Y  +I G C  ++ D A K+   M   GC  ++ +Y+ LIN  C
Sbjct: 493 VMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLC 552

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K VE+A+++   ML KG  P V TY +L  G  +I++++ A + F  MR +    D  
Sbjct: 553 KTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  I G C+SG V +A+E+ + + +     +  +Y  L+  L
Sbjct: 613 AYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 206/404 (50%), Gaps = 12/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ IL   L + +  D    L   +      PD   ++ LI   CKMG++     V
Sbjct: 90  PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+ +T+TSLI G C  + + EA  L  K +     PD   YN L+NGLC+
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                    L EEM     E      P+T +YNT++  LC+ G  ++A ++  KM ++  
Sbjct: 210 QNQLEEVSKLLEEMVEAGRE------PDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S++ GFC  +  +EA+RL  +M+ +   P V+T++ ++    +  ++  A R
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++E M   G++P+  TYN L+DG C   K++ A +L   M    C  DVV+Y+ L+N  C
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V++A  L   ML +G +P +VT+NT+  G  +  +V+   K+ + M+      D  
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY+  IDG CK+  + +A  +     D        SY+ +++GL
Sbjct: 444 TYSTLIDGYCKANRMQDAFAILGISPDK------ASYSSMLEGL 481



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 206/381 (54%), Gaps = 8/381 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           S F+   S    P   T+  LI  F + G       +   +L   F+P+ +T  +++K  
Sbjct: 10  SFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    +  A + F       C P  FTY  LI+GLC+      A  L +EM   +     
Sbjct: 70  CQIGDLDRALSHFRGK--MWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD----- 122

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C P+   YN +I GLCK G +D A+ +   M + +  PDV+TYTS+I G C  N  +EA
Sbjct: 123 -CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           ++L  +M + G+ PD V ++ +++ LCK  ++++ S+LLE M+  G  P+T++YNT++  
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C + K + A K+   M    C  DVV+YN+L++ +CK   ++EA  L  +M+ +   PT
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V+TY TL  G     ++  A ++ ++M +  ++ D  TYN  +DGLCK+G + EA EL  
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +     ++V+Y+ L++GL
Sbjct: 362 VMVEKDCAPDVVTYSILVNGL 382



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 210/403 (52%), Gaps = 8/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N +     +    D  LS F+        P  +T+ ILI+  C+  R+   + +
Sbjct: 57  PDVITHNTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQL 114

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    P+A  +  LI GLC   +I  A  +       +C PDV TY +LI G C+
Sbjct: 115 LDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQ 174

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T     A  L E+M     E G+   P+TV YN +++GLCK+  +++  +L  +M +   
Sbjct: 175 TNALDEARKLMEKMK----ESGLT--PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR 228

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y +V+   C +  + EA ++  +M+++   PDVVT++ +MD  CK  KMD+A R
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LLE M+ R   P   TY TLI G+   D++  A ++   M   G   D+V+YN L++  C
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  L   M+ K   P VVTY+ L  GL ++ +V+ A  L + M       +  
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV 408

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T+N  IDG CK+G V E  ++   +++     ++V+Y+ LIDG
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG 451



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 15/205 (7%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D+AS    L+  C S+G+ +       EA  + D M +    PP  S + ++ G L   +
Sbjct: 470 DKASYSSMLEGLC-STGKVE-------EAQEVMDLMTK-QGCPPTSSHYALIIGGLCDVE 520

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             D  L + + ++  G  P++YT+SILIN  CK  RV     VL  +L     P+  T+T
Sbjct: 521 RGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYT 580

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           SLI G C  +++  A   F   R   CEPD   YN LI+G C++G+   A+ + + M   
Sbjct: 581 SLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKE 266
                  C P+  TY +++  L  E
Sbjct: 641 G------CNPDAATYFSLMRSLTTE 659



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 2/203 (0%)

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           E    F E      +P   T+  ++    + G       +   M+ R  +P+  T+NT++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
             YC    +D A   F       C     +Y  LI+  C+ + ++EA  L  EM+ K   
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P    YN L  GL ++ +++ A  +   M       D  TY + I G C++  + EA +L
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
              +++S    + V+YN L++GL
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGL 207


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 208/381 (54%), Gaps = 12/381 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K       +   +R+ + G  PD +T++ +I+ +CK+  V     +
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +   F P+ VT+ SLI GLCAE  +  A  LF + +    +PD+  YN+L+ GLC 
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + AL +  EMA    E G  C P+  TYN +I+GLCK G +  A  +      +  
Sbjct: 376 QGLILHALQVMNEMA----EEG--CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 429

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV T+ ++I G+C     + A +L   M + G+ PD +T++ +++ LCK GK+++ + 
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 489

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + MI +G +PN  TYN LI+ +C ++K++ A K+ V M   G   D VS+NTLI  +C
Sbjct: 490 TFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL---FLGLFEIHQVERALKLFDEMRRNHVAA 461
           +N D+E A  L+ ++  KG   T  T+NTL   F G   +H  E   K+FDEM      A
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAE---KIFDEMLSKGHRA 606

Query: 462 DTYTYNNFIDGLCKSGFVLEA 482
           D+YTY   IDG CK+  V  A
Sbjct: 607 DSYTYRVLIDGSCKTANVDRA 627



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 224/418 (53%), Gaps = 8/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD ML  H  P  +++FN +   L K         L  ++   G+  +++T++I
Sbjct: 171 HDARQLFDQMLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   C+ GR+    V L   +R+   P+ VT+ +LI+GLC +S   EA     +     
Sbjct: 230 WIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD FTYNT+I+G C+      A  L ++        G V  P+ VTY ++I+GLC EG
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQVTYCSLINGLCAEG 342

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A ELF + + + I PD+V Y S+++G C       A ++  EM ++G  PD+ T++
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LCK G +  A+ ++   I +G  P+ +T+NTLIDGYC   K+D A +L   M   
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN+++N  CK   V E    + EM+ KG  P  +TYN L       +++E A
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            K+  +M +  +  D  ++N  I G C++G +  A  LF+ + +  Y     ++N LI
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 214/434 (49%), Gaps = 38/434 (8%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC---------- 153
           PP   ++N +   L    ++D    ++ R+ +AG+ PD++TH+I +  FC          
Sbjct: 85  PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALR 144

Query: 154 ------KMGRVSHGFVVLG---------------RILRSCFTPNAVTFTSLIKGLCAESR 192
                   G V++  VV G               ++L +   PN   F  ++  LC    
Sbjct: 145 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 204

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           ++EA  L  K        ++FTYN  I GLC  G    A+ L + M      + V   P+
Sbjct: 205 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR----AYAV---PD 257

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTYNT+I GLCK+    +A     +M ++   PD  TY ++I G+C  +   EA  L  
Sbjct: 258 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 317

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           + + +G  PD VT+  +++ LC  G +++A  L      +G+ P+   YN+L+ G CL  
Sbjct: 318 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 377

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            I HA ++   M   GC  D+ +YN +IN  CK  ++ +A  + ++ + KG  P V T+N
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G  +  +++ AL+L + M    +A DT TYN+ ++GLCK+G V E  E F+ +   
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497

Query: 493 KYELNIVSYNCLID 506
               N ++YN LI+
Sbjct: 498 GCHPNPITYNILIE 511



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 181/351 (51%), Gaps = 7/351 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+  +++ G  A+    +  L LF    + G+ PDI  ++ L+   C  G + H   
Sbjct: 326 PDQVTYCSLINGLCAEGD-VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V+  +      P+  T+  +I GLC    I +A  +     +    PDVFT+NTLI+G C
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +      AL L E M     E+G+   P+T+TYN++++GLCK G V++  E F +M  + 
Sbjct: 445 KRLKLDSALQLVERM----WEYGIA--PDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P+ +TY  +I  FC +N   EA ++ ++M  +G+ PD V+F+ ++   C+NG ++ A 
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 558

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + +  +G +    T+NTLI  +     +  A K+F  M S G   D  +Y  LI+  
Sbjct: 559 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 618

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           CK  +V+ A     EM+ KG  P++ T+  +   L   H+V +A+ +   M
Sbjct: 619 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIM 669



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 9/360 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L         L +   +   G  PDI T++I+IN  CKMG +S   VV
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +   + P+  TF +LI G C   ++  A  L  +   +   PD  TYN+++NGLC+
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G        F+EM          C PN +TYN +I+  C+   +++A ++ +KM  E +
Sbjct: 481 AGKVNEVNETFQEMILKG------CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD V++ ++I GFC   D   A  LF ++ ++G      TF+ ++        M  A +
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+ +G   ++YTY  LIDG C T  +D A    V M   G +  + ++  +IN   
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            N  V +A+ +   M+  G+ P VV      L   +       + + D M++ H++  TY
Sbjct: 655 VNHRVFQAVGIIHIMVKIGVVPEVV---DTILNADKKEIAAPKILVEDLMKKGHISYPTY 711



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 184/402 (45%), Gaps = 31/402 (7%)

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           RL+ A + P +Y  SI    + + GR+        R+      P A  + +++  L   +
Sbjct: 46  RLSPATIHP-LYVASI--RAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 102

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG---VV 248
              +A  ++ +       PD+ T+   +   C T    +AL L   + +  G      VV
Sbjct: 103 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPH-RGAVAYCTVV 161

Query: 249 CK-----------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           C                        PN   +N ++  LCK G V +A  L  K+    ++
Sbjct: 162 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 221

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            ++ TY   IRG C A    EA RL   M    V PDVVT++ ++  LCK     +A   
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 280

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L  M+ +G  P+ +TYNT+IDGYC    +  A +L       G + D V+Y +LIN  C 
Sbjct: 281 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 340

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             DVE AL L++E  +KGIKP +V YN+L  GL     +  AL++ +EM       D  T
Sbjct: 341 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 400

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I+GLCK G + +A  +        Y  ++ ++N LIDG
Sbjct: 401 YNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 71/359 (19%)

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           Y   I    R G    A++ FE M          C P    YN I+D L    + D+A +
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDL------FACPPAAPAYNAIMDALVDAAYHDQAHK 109

Query: 275 LFLKMKDENINPDVVTYTSVIRGFC------------------------------YANDW 304
           ++++M    ++PD+ T+T  +R FC                              YA+  
Sbjct: 110 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 169

Query: 305 -NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            ++A++LF +M+   V P++  F+ ++  LCK G + +A  LL  +I RG++ N +TYN 
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 364 LIDGYCLTDKIDHARKLFVSMES----------------------------------NGC 389
            I G C   ++  A +L   M +                                   GC
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D  +YNT+I+ YCK   V+EA  L  + + KG  P  VTY +L  GL     VERAL+
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LF+E +   +  D   YN+ + GLC  G +L AL++   + +     +I +YN +I+GL
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 228/422 (54%), Gaps = 11/422 (2%)

Query: 89  EALCIFDYMLRMH--PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           EAL +   M   H    PP V ++  +   L K + +D    +F+++   G+ P+  T++
Sbjct: 187 EALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYN 246

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+ +  +G+      +L ++      P+  T+ SL+  LCA S +     L  ++   
Sbjct: 247 CLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVEN--- 303

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD   +N   +   + G    A+++F +M     + G+   PN V Y  +ID LCK 
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR----QHGL--SPNVVNYGALIDALCKL 357

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G VD A+  F +M +E + P++V + S++ G C  + W  A+ L  EM+DQG+ P+ V F
Sbjct: 358 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 417

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LC  G++ +  RL++LM   GV P+ ++Y  LI GYCL  + D A K+F  M S
Sbjct: 418 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS 477

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G     V+YNTL++ YC    +++A  L+ EML KG+ P VVTYNT+  GLF+  +   
Sbjct: 478 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 537

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +L+  M  +    D YTYN  ++GLCKS  V EA ++F+++     +LNI+++  +I 
Sbjct: 538 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 597

Query: 507 GL 508
            L
Sbjct: 598 AL 599



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 232/465 (49%), Gaps = 29/465 (6%)

Query: 59  TVKDRA-SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCL 117
           TV+DR   L++ +  R +S   G       ++AL +FD +L +H  P  V +FN +   +
Sbjct: 7   TVRDRCLELERIIAARARSGSLG------LDDALKLFDELL-IHARPASVVAFNQILNAV 59

Query: 118 AKNKHYDT-----------VLSLFKRLN---SAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           ++                 V+SLF R+    S  + P+  T+SILI C C+MGR+ H F 
Sbjct: 60  SRASRASGRRSSSTSESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFA 119

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKHRVFACEPDVFTYNTLINGL 222
             G IL++ +  N +    L+KGLC   R+ EA   L  +     C PD  +Y+ L+ G 
Sbjct: 120 TFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGF 179

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C       AL L   MAN +G     C PN VTY T+IDGLCK    D+A+ +F +M D 
Sbjct: 180 CNENRAEEALELLRMMANDHGR---SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 236

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P+  TY  +I G+     W E  ++  +M  +G++PD  T+  +++ LC   +M   
Sbjct: 237 GVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHS- 295

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
              L+LM+  G++P+ + +N     Y     ID A  +F  M  +G   +VV+Y  LI+ 
Sbjct: 296 --FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDA 353

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK   V++A   +++M+++G+ P +V +N+L  GL  + + ERA +L  EM    +  +
Sbjct: 354 LCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 413

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +N  I  LC  G V+E   L   +       +  SY  LI G
Sbjct: 414 AVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 458



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 210/435 (48%), Gaps = 10/435 (2%)

Query: 48  TTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPV 107
           +  K KE +++  K  A   + LK  C + G     L   +E     D M+    SP   
Sbjct: 254 SIGKWKEVVQMLEKMSA---RGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDH- 309

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
             FNI F   AK    D  + +F ++   GL P++  +  LI+  CK+GRV    V   +
Sbjct: 310 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 369

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++    TPN V F SL+ GLC   +   A  L  +       P+   +NTLI  LC  G 
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
            +    L + M +      V  +P+  +Y  +I G C  G  D+A+++F  M    ++P 
Sbjct: 430 VMEGRRLIDLMEH------VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPT 483

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VTY +++ G+C A+  ++A  LF EM+ +GV P VVT++ I+  L +  +  +A  L  
Sbjct: 484 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 543

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            MI  G   + YTYN +++G C ++ +D A K+F S+ S G   +++++  +I    K  
Sbjct: 544 NMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 603

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
             E+A+ L++ + + G+ P VVTY  +   L E   +E    LF  M +N  A ++   N
Sbjct: 604 RKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 663

Query: 468 NFIDGLCKSGFVLEA 482
             +  L   G +  A
Sbjct: 664 ALVRRLLHRGDISRA 678



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           GL PD +  +I  + + K G +     +  ++ +   +PN V + +LI  LC   R+ +A
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
              F +       P++  +N+L+ GLC       A  L  EM +       +C PN V +
Sbjct: 364 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG-----IC-PNAVFF 417

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I  LC  G V + + L   M+   + PD  +YT +I G+C A   +EA+++F  M+ 
Sbjct: 418 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS 477

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G+ P  VT++ ++   C   ++D A  L   M+ +GV P   TYNT++ G   T +   
Sbjct: 478 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 537

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A++L+++M ++G   D+ +YN ++N  CK+  V+EA  ++  + SKG++  ++T+  +  
Sbjct: 538 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 597

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L +  + E A+ LF  +  N +  +  TY    + L + G + E   LF A+  +    
Sbjct: 598 ALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAP 657

Query: 497 NIVSYNCLI 505
           N    N L+
Sbjct: 658 NSQMLNALV 666


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 245/445 (55%), Gaps = 11/445 (2%)

Query: 64  ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           AS     +ER ++    +++ I  ++A  +F  ML+  P P  V  F  +   +AK   +
Sbjct: 41  ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKF 95

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D V+ L+ ++ + G+  D+Y+ +ILI+CFC+  R+S    +LG++++  F P+ VT  SL
Sbjct: 96  DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           + G C  +R  EA +L      F   P+V  YNT+INGLC+      AL +F  M     
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG- 214

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                 + + VTYNT+I GL   G    A  L   M    I+P+V+ +T++I  F    +
Sbjct: 215 -----IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA+ L+ EM+ + V P+V T++ +++  C +G +  A  + +LM+ +G  P+  TYNT
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G+C + +++   KLF  M   G + D  +YNTLI+ YC+   +  A  +++ M+  G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           + P +VTYN L   L    ++E+AL + ++++++ +  D  TYN  I GLC++  + EA 
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            LFR++     + + ++Y  +I GL
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGL 474



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 174/328 (53%), Gaps = 6/328 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L KN+  +  L +F  +   G+  D  T++ LI+     GR +    +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    PN + FT+LI     E  ++EA  L+ +    +  P+VFTYN+LING C 
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +F+ M +        C P+ VTYNT+I G CK   V+   +LF +M  + +
Sbjct: 302 HGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  TY ++I G+C A   N A+++F  M+D GV PD+VT+++++D LC NGK++KA  
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++E +    ++ +  TYN +I G C TDK+  A  LF S+   G   D ++Y T+I+  C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +     EA  L   M   G  P+   Y+
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 6/192 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K+K  +  + LF  +   GL  D +T++ LI+ +C+ G+++    V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++    +P+ VT+  L+  LC   +I +A  +    +    + D+ TYN +I GLCR
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T     A  LF  +       GV  KP+ + Y T+I GLC++G   +A +L  +MK++  
Sbjct: 442 TDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495

Query: 285 NPDVVTYTSVIR 296
            P    Y   +R
Sbjct: 496 MPSERIYDETLR 507


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 210/372 (56%), Gaps = 20/372 (5%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+  DI   SILIN F  + ++++ F VL +IL+  + P+ VT T+L+KGLC  + + +A
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
                         D  +Y TLINGLC++G T                      P+   Y
Sbjct: 65  LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------------PDQFMY 104

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + II+ LCK+  V  A +L+ +M  + I PDVVTY ++I GFC      +A RLF EM  
Sbjct: 105 SMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRL 164

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + + P+V +F++++D LCK G +     +L +MI + V P+  T ++LIDGY L  K + 
Sbjct: 165 KNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANK 224

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           AR +F +M  NG   D+ SYN +IN   K K V+EA+ L+ EM  K + P  +TY+TL  
Sbjct: 225 ARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLID 284

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL ++ ++     L DEMR    +A+  TY++ ++ LCKSG    A+ +F  I+D  +E 
Sbjct: 285 GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEP 344

Query: 497 NIVSYNCLIDGL 508
           N+V+YN L+DGL
Sbjct: 345 NMVTYNILVDGL 356



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 197/395 (49%), Gaps = 21/395 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A  +   +L++   P  V+   +L G L  N      L     + + G   D  ++  
Sbjct: 27  NYAFSVLAKILKIGYQPDTVTLTTLLKG-LCINNEVKKALHFHDDVIAKGFRLDNVSYGT 85

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  CK G                  P+   ++ +I  LC +  +++A  L+ +  V  
Sbjct: 86  LINGLCKSGETK--------------APDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKR 131

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV TYNTLI G C  G    A+ LF EM   N        PN  ++N +IDGLCKEG
Sbjct: 132 IFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN------IVPNVCSFNILIDGLCKEG 185

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V   K +   M  +++ PDVVT +S+I G+      N+A+ +F  M   GV  D+ +++
Sbjct: 186 DVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYN 245

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ L K   +D+A  L + M ++ + P+T TY+TLIDG     +I +   L   M + 
Sbjct: 246 IMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRAT 305

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +V++Y++L+N  CK+   + A+ +++++  KG +P +VTYN L  GL +  +++ A
Sbjct: 306 GRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDA 365

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            ++F ++       D   Y   I+GLC+     EA
Sbjct: 366 QEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA 400



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 14/229 (6%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M+   I  D++  + +I  F +    N A  +  +++  G QPD VT + ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + KA    + +I +G   +  +Y TLI+G C + +     +   SM              
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSM-------------- 106

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +IN  CK+K V +A  LY EM+ K I P VVTYNTL  G   + Q+E A++LF+EMR  +
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  +  ++N  IDGLCK G V     +   +     + ++V+ + LIDG
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDG 215



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 25/214 (11%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           C S   G   +   N+A  IF+ M + +     + S+NI+   L+K K  D  + LFK +
Sbjct: 209 CSSLIDGYFLVKKANKARYIFNAMAQ-NGVTIDLRSYNIMINGLSKAKMVDEAVILFKEM 267

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
               + PD  T+S LI+   K+GR+S+ + ++  +  +  + N +T++SL+  LC     
Sbjct: 268 QFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHF 327

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE---------------M 238
             A  +FTK +    EP++ TYN L++GLC+ G    A  +F +               M
Sbjct: 328 DTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVM 387

Query: 239 ANG-------NGEFGVVCKPNTVTYNTIIDGLCK 265
            NG       +  +G  C PN VTY  II  L K
Sbjct: 388 INGLCREALFDEAYG--CTPNAVTYEIIIRALFK 419


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 226/409 (55%), Gaps = 16/409 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----GLFPDIYTHSILINCFCKMGRVSH 160
           P V ++N +   L+     D  L   +R  S+    G+ P++YT++IL+   C  GR+  
Sbjct: 116 PSVPAYNAVLLALS-----DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLI 219
              V+G +  +   PNAVT+ +L+   C    +  A  + +  R     +P++ T+N+++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NGLC+ G    A  +F+EM            P+ V+YNT++ G CK G + ++  +F +M
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + PDVVT+TS+I   C A +  +A  L  +M ++G++ + VTF+ ++D  CK G +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A   +E M   G+ P+   YN LI+GYC   ++D AR+L   ME+     DVV+Y+T+
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ YCK  +++ A  L  +ML KG+ P  +TY++L  GL E  ++  A +LF+ M +  V
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D +TY   IDG CK G V +AL L   +       ++V+Y+ LI+GL
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 225/456 (49%), Gaps = 46/456 (10%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           MLR H   P V ++NIL   L      +  + +   +  AG  P+  T++ L+  FC+ G
Sbjct: 143 MLR-HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 201

Query: 157 RVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            +     V+  +       PN VTF S++ GLC   R+  A  +F +       PDV +Y
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 261

Query: 216 NTLINGLCRTGHTIVALNLFEEMAN--------------------GNGEFGVVC------ 249
           NTL++G C+ G    +L +F EM                      GN E  V        
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321

Query: 250 ---KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              + N VT+  +IDG CK+GF+D A     +M+   I P VV Y ++I G+C     + 
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ L  EM  + V+PDVVT+S I+   CK G +D A +L + M+ +GV P+  TY++LI 
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C   +++ A +LF +M   G   D  +Y TLI+ +CK  +VE+ALSL+ EM+ KG+ P
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN---------------NFID 471
            VVTY+ L  GL +  + + A +L  ++       D   Y+                 + 
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 561

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G C  G + EA ++++++ D  ++L+   Y+ LI G
Sbjct: 562 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 200/460 (43%), Gaps = 70/460 (15%)

Query: 75  KSSGQGDINLITPNE---ALC----------IFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           +  G    NL+T N     LC          +FD M+R     P V S+N L     K  
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVG 272

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                L++F  +   GL PD+ T + LI+  CK G +     ++ ++       N VTFT
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +LI G C +  + +A     + R    +P V  YN LING C+ G   +A  L  EM   
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   KP+ VTY+TII G CK G +D A +L  KM  + + PD +TY+S+IRG C  
Sbjct: 393 R------VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              N+A  LF  M+  GVQPD  T++ ++D  CK G ++KA  L + MI +GV P+  TY
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506

Query: 362 NTLIDG--------------------------------------------------YCLT 371
           + LI+G                                                  +C+ 
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             +  A K++ SM       D   Y+ LI+ +C+  +V +ALS + +ML  G  P   + 
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 626

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            +L  GLFE   V  A     ++      AD       ID
Sbjct: 627 ISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/440 (34%), Positives = 218/440 (49%), Gaps = 42/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG------RV 158
           P VS+FNIL   L +       + L + +   GL PD  T + ++  F + G      RV
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252

Query: 159 SH-------------------GFVVLGRI-----------LRSCFTPNAVTFTSLIKGLC 188
                                GF   GRI           LR  F P+  TF  L+ GL 
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLS 312

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               +  A  +         +PD++TYN+LI+GLC+ G    A+ +  +M   +      
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD------ 366

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C PNTVTYNTII  LCKE  V++A +L L +  + I PDV TY S+I+G C + +   A 
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L+ EM  +G  PD  T+++++D LC  GK+ +A  LL+ M   G   N  TYNTLIDG+
Sbjct: 427 ELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGF 486

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   +I  A ++F  ME  G   + V+YNTLI+  CK++ VEEA  L  +M+ +G++P  
Sbjct: 487 CKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDK 546

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TYN+L     +   +++A  +   M  +    D  TY   I GLCK+G V  A +L R 
Sbjct: 547 FTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRT 606

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I+     L   +YN +I  L
Sbjct: 607 IQMKGINLTPHAYNPVIQAL 626



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/421 (34%), Positives = 221/421 (52%), Gaps = 7/421 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL   + M       P   +FN+L   L+K  H    L +   +   G  PDIYT++ L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK+G V     VL +++    +PN VT+ ++I  LC E+++ EA  L         
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TYN+LI GLC + +  VA+ L++EM          C P+  TYN +ID LC  G 
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG------CHPDEFTYNMLIDSLCFRGK 456

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A  L  +M+      +V+TY ++I GFC      EA+ +F +M  QGV  + VT++ 
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LCK+ ++++AS+L++ MI  G+ P+ +TYN+L+  +C    I  A  +  +M S+G
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+V+Y TLI   CK   VE A  L   +  KGI  T   YN +   LF   + + A+
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +LF EM     A D  TY     GLC+ G  + EA++    + +  Y     S+  L +G
Sbjct: 637 RLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696

Query: 508 L 508
           L
Sbjct: 697 L 697



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 221/445 (49%), Gaps = 43/445 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLN-------------SAGLFPDIYTHSILINCFC 153
           V +  + FG +A    Y+ +L++    N             S G+ PD+ T +ILI   C
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           +  ++    +++  +      P+  TFT++++G   E  +  A  +  +     C     
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMA----------------NGNGEFGVV--------- 248
           T N L+NG C+ G    AL   EEM+                NG  + G V         
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326

Query: 249 -----CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                  P+  TYN++I GLCK G VD+A ++  +M + + +P+ VTY ++I   C  N 
Sbjct: 327 MLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQ 386

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA +L + +  +G+ PDV T++ ++  LC +     A  L + M  +G +P+ +TYN 
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LID  C   K+  A  L   ME +GC  +V++YNTLI+ +CKNK + EA  ++ +M  +G
Sbjct: 447 LIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG 506

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           +    VTYNTL  GL +  +VE A +L D+M    +  D +TYN+ +   CK+G + +A 
Sbjct: 507 VSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAA 566

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ + +     E +IV+Y  LI GL
Sbjct: 567 DIVQTMASDGCEPDIVTYGTLIAGL 591



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FT   L++ L R   +   ++LF   A+    F    KP++  +  ++  L K G  D  
Sbjct: 54  FTPTQLLHSLRREEDSSAVIHLFY-WASKQPNF----KPSSSIFKEVLHKLGKAGEFDAM 108

Query: 273 KELFLKMK-------DENINPDVVTYTS-------------------VIRGFCYAN---- 302
           K++  +MK       ++++   + +Y S                   V+    + N    
Sbjct: 109 KDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLN 168

Query: 303 ---DWNEAKRLFI---EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
              D N+ K + I    M+ +G++PDV TF++++  LC+  ++  A  L+E M   G+ P
Sbjct: 169 VLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLP 228

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  T+ T++ G+     +D A ++   M   GC+   V+ N L+N +CK   +EEAL   
Sbjct: 229 DEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFI 288

Query: 417 SEM-LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            EM L +G  P   T+N L  GL +   V+ AL++ D M R     D YTYN+ I GLCK
Sbjct: 289 EEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G V EA+++   + +     N V+YN +I  L
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTL 381


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/409 (35%), Positives = 226/409 (55%), Gaps = 15/409 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP +  FN +    AK KHY TV SL  RL   G+ PD++T +I
Sbjct: 41  DDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNI 98

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC MG+++ GF VL +IL+  + P+ VT  +LIKGLC + ++ +A     K     
Sbjct: 99  LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +   Y TLING+C+ G T  A+ L +++       G + KP+ V Y+TIID LCK  
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKID------GRLTKPDVVMYSTIIDALCKYQ 212

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  LF +M  + I+ DVVTY ++I GFC      EA  L   M+ + + PDV T++
Sbjct: 213 LVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYT 272

Query: 328 VIMDELCKNGKMDKASR-------LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           +++D LCK GK+ +A R       L++ M  RG   +  TY++LIDG C    +D A  L
Sbjct: 273 ILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 332

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M+  G   ++ ++  L++   K   +++A  ++ ++L+KG    V TYN +  G  +
Sbjct: 333 FNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 392

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
              +E AL +  +M  N    + +T+   I  L K     +A +L R +
Sbjct: 393 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 164/328 (50%), Gaps = 13/328 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N L   L         L    +L + G   +   +  LIN  CK+G       
Sbjct: 125 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIK 184

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L +I      P+ V ++++I  LC    + EA  LF++  V     DV TYNTLI G C
Sbjct: 185 LLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFC 244

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK-------ELF 276
             G    A+ L   M            P+  TY  ++D LCKEG V +AK       +L 
Sbjct: 245 IVGKLKEAIGLLNVMVLKT------INPDVYTYTILVDALCKEGKVKEAKRRISYVWDLI 298

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M+D     DV+TY+S+I G C     + A  LF +M DQG++P++ TF++++D L K 
Sbjct: 299 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKG 358

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++  A  + + ++ +G + N YTYN +I+G+C    ++ A  +   ME NGC+ +  ++
Sbjct: 359 GRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTF 418

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGI 424
            T+I    K  + ++A  L  +M+++G+
Sbjct: 419 ETIIIALFKKDENDKAEKLLRQMIARGL 446



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 142/273 (52%), Gaps = 13/273 (4%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
             + L K+++     PD+  +S +I+  CK   VS  + +   +     + + VT+ +LI
Sbjct: 181 AAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLI 240

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA-------LNLFEE 237
            G C   ++ EA  L     +    PDV+TY  L++ LC+ G    A        +L +E
Sbjct: 241 YGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDE 300

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M +  G+       + +TY+++IDGLCK G +D+A  LF KMKD+ I P++ T+T ++ G
Sbjct: 301 MRD-RGQ-----PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDG 354

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
                   +A+ +F +++ +G   +V T++V+++  CK G +++A  +L  M   G  PN
Sbjct: 355 LWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 414

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
            +T+ T+I      D+ D A KL   M + G +
Sbjct: 415 AFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 8/265 (3%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P  + +N I+D   K         L  +++ + I PD+ T   +I  FC+         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 115

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +++ +G  P  VT + ++  LC  G++ KA    + ++ +G   N   Y TLI+G C 
Sbjct: 116 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCK 175

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                 A KL   ++      DVV Y+T+I+  CK + V EA  L+SEM  KGI   VVT
Sbjct: 176 IGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 235

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA-------L 483
           YNTL  G   + +++ A+ L + M    +  D YTY   +D LCK G V EA        
Sbjct: 236 YNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVW 295

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +L   +RD     ++++Y+ LIDGL
Sbjct: 296 DLIDEMRDRGQPADVITYSSLIDGL 320


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 206/375 (54%), Gaps = 33/375 (8%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           MLRM P PP +  F+ L   + + KHY TVLSL+K+++S G+  + YT +ILIN FC + 
Sbjct: 1   MLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           R+   F VLG IL+  + P+  TFT+LI+GLC E +I EA  LF K      +PDV TY 
Sbjct: 60  RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 217 TLINGLCRTGHTIVALNLFEEM-ANGN-----------------GEFGVVCK-------- 250
           TLINGLC+      AL+LF +M A G                  G +    +        
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 251 ---PNTVTYNTIIDGLCKEGFV---DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
              P+ +T+NT++D LCKEG +   DKA  LF +M  + + PD VTY ++I G C+    
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A  LF EM+  G  PD+VT+ ++ D LCKN ++ +A  LL+++    ++P+ + Y+ +
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +DG C   +++ AR LF  + S G   DV +Y  +IN  C+   + EA  L+ EM    I
Sbjct: 300 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359

Query: 425 KPTVVTYNTLFLGLF 439
           +         F G+F
Sbjct: 360 ESYSTFSRNAFKGIF 374



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 9/344 (2%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +LR    P+ V F+ L+  +          +L+ +   F    + +T N LIN  C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A ++  ++        +  +P+T T+ T+I GLC EG + +A +LF KM  E   PD
Sbjct: 61  LGFAFSVLGDILK------LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPD 114

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V+TY ++I G C      EA  LF +M+ +G+ P+  T+S ++  LC  G   +A RL  
Sbjct: 115 VLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFY 174

Query: 348 LMIWRGVNPNTYTYNTLIDGYC---LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            MI R + P+  T+NTL+D  C   +   +D A  LF  M   G + D V+YNTLI+  C
Sbjct: 175 AMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 234

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               + +A++L+ EM+  G  P +VTY  LF  L + H++  A+ L   +   ++  D +
Sbjct: 235 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIH 294

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y+  +DG+C++G +  A +LF  +       ++ +Y  +I+GL
Sbjct: 295 IYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGL 338



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 26/217 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKN---KHYDTVLSLFKRLNSAGLFPDIYTH 145
           EA+ +F  M+     P  ++ FN L   L K    +  D  + LF+ ++  GL PD  T+
Sbjct: 168 EAIRLFYAMIHRKIMPDQLT-FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTY 226

Query: 146 SILINCFCKMGRVS------HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           + LI+  C +GR+       H  VV G+I      P+ VT+  L   LC   R+ EA  L
Sbjct: 227 NTLIHGLCHVGRLRDAIALFHEMVVYGQI------PDLVTYRILFDYLCKNHRLAEAMVL 280

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
                    +PD+  Y+ +++G+CR G    A +LF ++++          P+  TY  +
Sbjct: 281 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG------LHPDVRTYTIM 334

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           I+GLC++G + +A +LF +M DEN   D+ +Y++  R
Sbjct: 335 INGLCQQGLLAEASKLFGEM-DEN---DIESYSTFSR 367


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 222/417 (53%), Gaps = 14/417 (3%)

Query: 94  FDYMLRMHPSPPPVSSFNIL--FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
            +YM     SP  ++   ++  F  + + K+   ++ +   L  +G   D+ ++++LI+ 
Sbjct: 102 LEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGI---LEESGAVIDVTSYNVLISG 158

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +CK G +     VL R+     +PNA T+ +++  LC   ++ +A  +  +     C PD
Sbjct: 159 YCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPD 215

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V T   LI+  C+      A+ LF EM N        CKP+ VTYN +I G CK G +D+
Sbjct: 216 VVTCTVLIDATCKESGVGQAMKLFNEMRNKG------CKPDVVTYNVLIKGFCKGGRLDE 269

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A     K+      PDV+++  ++R  C    W +A +L   M+ +G  P VVTF+++++
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LC+ G + KA  +LE+M   G  PN+ ++N LI G+C    ID A +    M S GC  
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+V+YN L+   CK+  V++A+ + S++ SKG  P++++YNT+  GL ++ + E A++L 
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +EM    +  D  T  + + GL + G V EA++ F  ++      N   YN +I GL
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGL 506



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 190/408 (46%), Gaps = 32/408 (7%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+S+N+L     K+   +  L +  R+   G+ P+  T+  ++   C  G++     VLG
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R L+S   P+ VT T LI   C ES + +A  LF + R   C+PDV TYN LI G C+ G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 227 HTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTVTYN 257
               A+   +++ +   +  V+                             C P+ VT+N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I+ LC++G + KA  +   M      P+  ++  +I+GFC     + A      M+ +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  PD+VT+++++  LCK+GK+D A  +L  +  +G +P+  +YNT+IDG     K + A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            +L   M   G   D+++  +++    +   V EA+  +  +    I+P    YN++  G
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           L +  Q   A+    +M          TY   I G+   G   +A +L
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 130/244 (53%), Gaps = 3/244 (1%)

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L + G +++       M ++  +PDV+  T++IR FC       A ++   + + G   D
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V +++V++   CK+G++++A R+L+ M   GV+PN  TY+ ++   C   K+  A ++  
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
               + C  DVV+   LI+  CK   V +A+ L++EM +KG KP VVTYN L  G  +  
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +++ A++   ++       D  ++N  +  LC  G  ++A++L   +       ++V++N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 503 CLID 506
            LI+
Sbjct: 326 ILIN 329



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 104/195 (53%), Gaps = 11/195 (5%)

Query: 321 PDVVTFSVIMDE--------LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           PD V  S+  +E        L +NG++++ SR LE M  +G +P+      LI  +C   
Sbjct: 69  PDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIG 128

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +  +A ++   +E +G + DV SYN LI+ YCK+ ++EEAL +   M   G+ P   TY+
Sbjct: 129 RTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYD 185

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +   L +  ++++A+++     ++    D  T    ID  CK   V +A++LF  +R+ 
Sbjct: 186 AVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK 245

Query: 493 KYELNIVSYNCLIDG 507
             + ++V+YN LI G
Sbjct: 246 GCKPDVVTYNVLIKG 260



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 3/214 (1%)

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +R      +  E  R    M ++G  PDV+  + ++ E CK G+   AS+++ ++   G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             +  +YN LI GYC + +I+ A ++   M   G   +  +Y+ ++   C    +++A+ 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +    L     P VVT   L     +   V +A+KLF+EMR      D  TYN  I G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G + EA+   + +     + +++S+N ++  L
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 227/430 (52%), Gaps = 25/430 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  I  +M       P   ++NI+          +  + L K+++ +GL PD+ T+ +
Sbjct: 255 NKAEAILQHMFD-KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYIL 313

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT------ 201
           LI  +CK+GR +    V   ++R    PN+  +  L+ G   +  +++   L        
Sbjct: 314 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 373

Query: 202 ---KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
              +HR F         N LI    + G    A+  F EM   NG      +P+ V+Y+T
Sbjct: 374 IPFEHRAF---------NILICAYAKHGAVDKAMTAFTEMRQ-NG-----LRPDVVSYST 418

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I  LCK G V+ A   F +M  E ++P+++++TS+I G C   +W + + L  EM+++G
Sbjct: 419 VIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 478

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + PD +  + IMD LCK G++ +A    +++I  GV PN  +YNTLIDGYC   K+D + 
Sbjct: 479 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESI 538

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           K F  M S G   D  +YN L+N Y KN  VE+AL+LY EM  K +K   +T N +  GL
Sbjct: 539 KQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGL 598

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           F+  ++  A +L+ +M          TYN  + GLC++  V EAL +F  +R  ++EL++
Sbjct: 599 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 658

Query: 499 VSYNCLIDGL 508
            ++N +I+ L
Sbjct: 659 WTFNIVINAL 668



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 247/526 (46%), Gaps = 97/526 (18%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L++ +  R +S   G        +AL +FD +L     P  V +FN +   +A+     +
Sbjct: 15  LERIILNRHRSGSLG------REDALNLFDELLP-QARPASVHAFNSVLTVVARADSSSS 67

Query: 126 -------VLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSH-----------GF-- 162
                   +SLF  +  +G   +  + Y   ILI CFC +GR+             G+  
Sbjct: 68  PRHSAALAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRV 127

Query: 163 --VVLGRILRSC---------------------FTPNAVTFTSLIKGLCAESRIMEAAAL 199
             V L ++++                       +TP+  ++ +LIKGLC E +  EA  L
Sbjct: 128 QNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 187

Query: 200 F---TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
               T    + C P+V +Y+T+I+G  + G    A  LF+EM       G    P+ VTY
Sbjct: 188 LLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEM------IGQGFPPDVVTY 241

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           +++IDGLCK   ++KA+ +   M D+ + P+  TY  +IRG+C      EA RL  +M  
Sbjct: 242 SSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 301

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTD 372
            G+QPDVVT+ +++   CK G+  +A  + + M+ +G  PN+  Y+ L+ GY     L D
Sbjct: 302 SGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 361

Query: 373 -------------------------------KIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                                           +D A   F  M  NG   DVVSY+T+I+
Sbjct: 362 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIH 421

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   VE+A+  +++M+S+G+ P ++++ +L  GL  I + ++  +L  EM    +  
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D    N  +D LCK G V+EA + F  +     + N+VSYN LIDG
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDG 527



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 210/415 (50%), Gaps = 11/415 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+R    P    +FNIL    AK+   D  ++ F  +   GL PD+ ++S +I+  
Sbjct: 365 LLDLMIR-DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA--ESRIMEAAALFTKHRVFACEP 210
           CK+GRV        +++    +PN ++FTSLI GLC+  E + +E  A    +R     P
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR--GIHP 481

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D    NT+++ LC+ G  + A + F+ + +     GV  KPN V+YNT+IDG C  G +D
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIH----IGV--KPNVVSYNTLIDGYCFVGKMD 535

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           ++ + F +M    + PD  TY +++ G+       +A  L+ EM  + V+   +T ++I+
Sbjct: 536 ESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIIL 595

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L + G++  A  L   M+ RG      TYNT++ G C    +D A ++F  + S    
Sbjct: 596 HGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFE 655

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DV ++N +IN   K   ++EA SL+S M+ +G  P V+TY+ +     E   +E +  L
Sbjct: 656 LDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDL 715

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           F  M +N  AAD++  N  I  L + G V  A      I +  + +   +   LI
Sbjct: 716 FLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 192/398 (48%), Gaps = 7/398 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M+R    P       +L G   K    D V  L   +   G+  +    +IL
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID-VRDLLDLMIRDGIPFEHRAFNIL 384

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  + K G V         + ++   P+ V+++++I  LC   R+ +A   F +      
Sbjct: 385 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++ ++ +LI+GLC  G       L  EM N          P+ +  NTI+D LCKEG 
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG------IHPDAIFMNTIMDNLCKEGR 498

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A++ F  +    + P+VV+Y ++I G+C+    +E+ + F  M+  G++PD  T++ 
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++   KNG+++ A  L   M  + V     T N ++ G     +I  AR+L++ M   G
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               + +YNT++   C+N  V+EAL ++ ++ SK  +  V T+N +   L ++ +++ A 
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            LF  M          TY+  I    + G + E+ +LF
Sbjct: 679 SLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLF 716


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 221/437 (50%), Gaps = 39/437 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L K ++ D   +L     S+G  PD+ T+SIL +  CK GR+   F +
Sbjct: 78  PSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +  +  TPN VT+ +LI GLC  S+  +A  L          PDV TY  +++GLC+
Sbjct: 138 VKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCK 197

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + E M          C P+ +TY  +++GLC+ G VD+A  +F +M  ++ 
Sbjct: 198 EGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRL--------------------------------FI 312
             D + Y S++ G+C ++   EA+++                                F 
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 311

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           +M  +G  P++ T++++MD LCK+GK+D+A   LE M   G  P+  +YN +IDG     
Sbjct: 312 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 371

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K   AR++   M   G   D V+YNTL+  +CK +  ++A+ +   M+  G+ P  VTYN
Sbjct: 372 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 431

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           TL  GL + +++  A +L  EM RN  V +   TYN  ID LCK G + +AL L   +  
Sbjct: 432 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 491

Query: 492 SKYELNIVSYNCLIDGL 508
              E N V+YN  ID L
Sbjct: 492 HGVEANTVTYNIFIDRL 508



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 208/378 (55%), Gaps = 13/378 (3%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +N   + PD++T++ILI+  CK  +      +L  ++    TP+ VTF S++ GLC   +
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
              A +L        C P   TYNTLI+GLC+  +   A  L +E  +     G V  P+
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS----GFV--PD 114

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTY+ + DGLCK G +D+A EL  +M      P++VTY ++I G C A+   +A  L  
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            ++  G  PDVVT+++I+D LCK G++DKA +++E M+ RG  P+  TY  L++G C T 
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK--PTVVT 430
           ++D A  +F  M S  C  D ++Y +L+N YCK+   +EA     + +  GI+  P +  
Sbjct: 235 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDV 289

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YN L  G  +  +++    +F++M       +  TYN  +DGLCK G V EA     ++ 
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349

Query: 491 DSKYELNIVSYNCLIDGL 508
            +    ++VSYN +IDGL
Sbjct: 350 SAGCVPDVVSYNIIIDGL 367



 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 212/436 (48%), Gaps = 38/436 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L K    D    +   +   G+ PD  T + +++  CK G+      +
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+  T+ +LI GLC +  +  A  L  +       PDV TY+ L +GLC+
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM+ GNG     C PN VTYNT+IDGLCK    +KA EL   +     
Sbjct: 128 RGRIDEAFELVKEMS-GNG-----CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTYT ++ G C     ++A ++   M+ +G  P V+T++ +M+ LC+ G++D+A  
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 345 LLELMIWR------------------------------GVNPNTY--TYNTLIDGYCLTD 372
           + + M+ +                              G+    Y   YN L+DGYC   
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEG 301

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           ++D    +F  M   GC+ ++ +YN +++  CK+  V+EA      M S G  P VV+YN
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 361

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +  GLF+  + + A ++ D+M +  +  D  TYN  +   CK     +A+ + + +  +
Sbjct: 362 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 421

Query: 493 KYELNIVSYNCLIDGL 508
             + + V+YN LI GL
Sbjct: 422 GVDPDNVTYNTLISGL 437



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 224/499 (44%), Gaps = 95/499 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K    +    L + L S+G  PD+ T++I+++  CK GR+     +
Sbjct: 148 PNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 207

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +L+   TP+ +T+T+L++GLC   R+ EA  +F +     C  D   Y +L+NG C+
Sbjct: 208 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 267

Query: 225 TGHTIVA------------LNLFEEMANGNGEFGVV--------------CKPNTVTYNT 258
           +  T  A            ++++  + +G  + G +              C PN  TYN 
Sbjct: 268 SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 327

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++DGLCK G VD+A      M      PDVV+Y  +I G   A+   EA+++  +M+  G
Sbjct: 328 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 387

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + PD VT++ +M + CK  + D A  +L+ MI  GV+P+  TYNTLI G   T+++  A 
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447

Query: 379 KLFVSMESNGCMHDV-VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN----- 432
           +L   M  NGC+     +YNT+I+  CK   +++AL L   M   G++   VTYN     
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 507

Query: 433 ---------------------------TLFLGLFEIHQVERALKLFDEMR---------- 455
                                      T+ +GL +  Q++RA KL  EM           
Sbjct: 508 LCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 567

Query: 456 --------------------------RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                                     +   +    TYN  I  LCK   V +A ELF  +
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627

Query: 490 RDSKYELNIVSYNCLIDGL 508
                  + VSY  LI GL
Sbjct: 628 AVRGIVASSVSYTVLIYGL 646



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 189/384 (49%), Gaps = 9/384 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NI+   L K+   D      + ++SAG  PD+ +++I+I+   K  +      V
Sbjct: 320 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 379

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++++   P+AVT+ +L+   C E R  +A  +         +PD  TYNTLI+GL +
Sbjct: 380 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 439

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T     A  L  EM   NG     C     TYNTIID LCKEG + +A  L   M    +
Sbjct: 440 TNRLGDAYELMHEMLR-NGCVVSAC----TTYNTIIDRLCKEGCLKQALLLMDHMTGHGV 494

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + VTY   I   C     +EA  L  EM       D V+++ ++  LCK  ++D+AS+
Sbjct: 495 EANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASK 551

Query: 345 LL-ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           L  E++  +G+   ++T+N LID +  T ++D A  L   M   GC   V++YN +I   
Sbjct: 552 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCL 611

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   V++A  L+ EM  +GI  + V+Y  L  GL    + + AL++ +EM  +    D 
Sbjct: 612 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 671

Query: 464 YTYNNFIDGLCKSGFVLEALELFR 487
                    L   G   EA EL R
Sbjct: 672 LKCRKLYLALRGQGRGEEAAELLR 695



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 45/299 (15%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA  + D M++    PP   ++N L     K + +D  + + K +  AG+ PD  T++
Sbjct: 373 PKEARQVLDQMIQAGI-PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 431

Query: 147 ILINCFCKMGRVSHGFVVLGRILR------SCFT-------------------------- 174
            LI+   +  R+   + ++  +LR      +C T                          
Sbjct: 432 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 491

Query: 175 ----PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
                N VT+   I  LC E R+ EA++L ++        D  +Y T+I GLC+      
Sbjct: 492 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDR 548

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  L  EM    G    +C   + T+N +ID   K   +D+A  L   M     +P V+T
Sbjct: 549 ASKLAREMVAVKG----LC-ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVIT 603

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           Y  VI   C  +  ++A  LF EM  +G+    V+++V++  LC  G+  +A ++LE M
Sbjct: 604 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 226/409 (55%), Gaps = 16/409 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----GLFPDIYTHSILINCFCKMGRVSH 160
           P V ++N +   L+     D  L   +R  S+    G+ P++YT++IL+   C  GR+  
Sbjct: 116 PSVPAYNAVLLALS-----DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLI 219
              V+G +  +   PNAVT+ +L+   C    +  A  + +  R     +P++ T+N+++
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NGLC+ G    A  +F+EM            P+ V+YNT++ G CK G + ++  +F +M
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + PDVVT+TS+I   C A +  +A  L  +M ++G++ + VTF+ ++D  CK G +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A   +E M   G+ P+   YN LI+GYC   ++D AR+L   ME+     DVV+Y+T+
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ YCK  +++ A  L  +ML KG+ P  +TY++L  GL E  ++  A +LF+ M +  V
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D +TY   IDG CK G V +AL L   +       ++V+Y+ LI+GL
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 225/456 (49%), Gaps = 46/456 (10%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           MLR H   P V ++NIL   L      +  + +   +  AG  P+  T++ L+  FC+ G
Sbjct: 143 MLR-HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 201

Query: 157 RVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            +     V+  +       PN VTF S++ GLC   R+  A  +F +       PDV +Y
Sbjct: 202 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 261

Query: 216 NTLINGLCRTGHTIVALNLFEEMAN--------------------GNGEFGVVC------ 249
           NTL++G C+ G    +L +F EM                      GN E  V        
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321

Query: 250 ---KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              + N VT+  +IDG CK+GF+D A     +M+   I P VV Y ++I G+C     + 
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ L  EM  + V+PDVVT+S I+   CK G +D A +L + M+ +GV P+  TY++LI 
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C   +++ A +LF +M   G   D  +Y TLI+ +CK  +VE+ALSL+ EM+ KG+ P
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN---------------NFID 471
            VVTY+ L  GL +  + + A +L  ++       D   Y+                 + 
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 561

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G C  G + EA ++++++ D  ++L+   Y+ LI G
Sbjct: 562 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 200/460 (43%), Gaps = 70/460 (15%)

Query: 75  KSSGQGDINLITPNE---ALC----------IFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           +  G    NL+T N     LC          +FD M+R     P V S+N L     K  
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVG 272

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                L++F  +   GL PD+ T + LI+  CK G +     ++ ++       N VTFT
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +LI G C +  + +A     + R    +P V  YN LING C+ G   +A  L  EM   
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   KP+ VTY+TII G CK G +D A +L  KM  + + PD +TY+S+IRG C  
Sbjct: 393 R------VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              N+A  LF  M+  GVQPD  T++ ++D  CK G ++KA  L + MI +GV P+  TY
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506

Query: 362 NTLIDG--------------------------------------------------YCLT 371
           + LI+G                                                  +C+ 
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             +  A K++ SM       D   Y+ LI+ +C+  +V +ALS + +ML  G  P   + 
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 626

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            +L  GLFE   V  A     ++      AD       ID
Sbjct: 627 ISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 226/418 (54%), Gaps = 11/418 (2%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAK-----NKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           ++   H   P V S+N +   L +     ++ YD    +F+ +   G+ P++YT++++I 
Sbjct: 156 HLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIR 215

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
                G +  G   + ++ +   +PN VT+ +LI   C + ++ EA AL     V     
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           ++ +YN++INGLC  G       L EEM  G G       P+ VTYNT+++G CKEG + 
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEM-RGKG-----LVPDEVTYNTLVNGFCKEGNLH 329

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +   L  +M  + ++P+VVTYT++I   C A + + A  +F +M  +G++P+  T++ ++
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D  C+ G M++A ++L  MI  G +P+  TYN L+ GYC   ++  A  +   M   G  
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DVVSY+T+I  +C+ +++ +A  +  EM+ KG+ P  VTY++L  GL    ++  A  L
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F EM R  +  D  TY + I+  C  G + +AL L   +    +  + V+Y+ LI+GL
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 227/464 (48%), Gaps = 45/464 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M+R   SP  V ++N++   +      +  L   +++   G+ P++ T++ 
Sbjct: 189 DDAERVFRDMVRNGVSPN-VYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK  +V     +L  +       N +++ S+I GLC + R+ E   L  + R   
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK-------- 250
             PD  TYNTL+NG C+ G+    L L  EM        VV         CK        
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       PN  TY T+IDG C++G +++A ++  +M     +P VVTY +++ G+
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C+     EA  +   M+++G+ PDVV++S ++   C+  ++ KA ++ E M+ +GV P+T
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY++LI G CL  K+  A  LF  M   G   D V+Y +LIN YC + ++ +AL L+ E
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID------- 471
           M+ +G  P  VTY+ L  GL +  + + A +L  ++       D  TYN  I+       
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEF 607

Query: 472 --------GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                   G C  G + EA  +F+ +    ++ N   YN +I G
Sbjct: 608 KSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHG 651



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 216/466 (46%), Gaps = 38/466 (8%)

Query: 59  TVKDRASLKKFLKE-----RCKSSGQGDINLITPNE---ALCIFDYM---------LRMH 101
           T+ D +  KK +KE     R  + G    NLI+ N     LC    M         +R  
Sbjct: 247 TLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK 306

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
              P   ++N L     K  +    L L   +   GL P++ T++ LINC CK G +S  
Sbjct: 307 GLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRA 366

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +  ++      PN  T+T+LI G C +  + EA  + ++  V    P V TYN L++G
Sbjct: 367 VEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHG 426

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C  G    A+ +   M     E G+   P+ V+Y+T+I G C+E  + KA ++  +M +
Sbjct: 427 YCFLGRVQEAVGILRGMV----ERGL--PPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + + PD VTY+S+I+G C      EA  LF EMM +G+ PD VT++ +++  C +G++ K
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSK 540

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI- 400
           A RL + M+ RG  P+  TY+ LI+G     +   A++L + +     + D V+YNTLI 
Sbjct: 541 ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600

Query: 401 --------------NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                           +C    + EA  ++  ML +  KP    YN +  G      V +
Sbjct: 601 NCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHK 660

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           A  L+ E+  +  A  T      +  L + G   E   L + I  S
Sbjct: 661 AYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRS 706



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 21/268 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ L   L   +       LF+ +   GL PD  T++ LIN +C  G +S    +
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI----- 219
              +++  F P+ VT++ LI GL  ++R   A  L  K       PD  TYNTLI     
Sbjct: 545 HDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSN 604

Query: 220 ----------NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
                      G C  G    A  +F+ M   N       KPN   YN +I G  + G V
Sbjct: 605 NEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH------KPNAAIYNLMIHGHSRGGNV 658

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            KA  L+++++  +     V   ++++        +E  RL   ++      D     V+
Sbjct: 659 HKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVL 718

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPN 357
           ++   K G MD    +L  M   G+ P+
Sbjct: 719 VEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI-----HQVERALKLFDEMRRNHVAADT 463
           V +AL+L       G  PTV++YN +   L           + A ++F +M RN V+ + 
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNV 207

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YTYN  I G+   G + + L   R +       N+V+YN LID 
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDA 251


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/425 (34%), Positives = 219/425 (51%), Gaps = 10/425 (2%)

Query: 88  NEALCIFDYMLRMHP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           ++A+ +F   +   P SPP   + + L   L K + YD V+S++ ++ SA + P   + S
Sbjct: 22  SDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLS 81

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRV 205
            L   F      S  F VL  + +  F  N      ++KG C   +  +A +LF++  R 
Sbjct: 82  ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 206 FACE-PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           + C  PD  TYNTL+NG C+      A  LFE M  G       C+PN VTY+ +ID  C
Sbjct: 142 YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGD-----CRPNLVTYSVLIDCYC 196

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G V +   L  +M+ E +  DV  Y+S+I  FC   D    + LF EM+ + V P+VV
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVV 256

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+S +M  L + G+  +AS +L+ M  RGV P+   Y  L DG C   +   A K+   M
Sbjct: 257 TYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM 316

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G     ++YN ++N  CK   +++A  +   M+ KG KP  VTYNTL  GL    ++
Sbjct: 317 VQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKI 376

Query: 445 ERALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
             A+ L+  +   + HV  D +T NN I GLCK G V +A  +  ++ +   + NIV+YN
Sbjct: 377 HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYN 436

Query: 503 CLIDG 507
            LI+G
Sbjct: 437 FLIEG 441



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 218/456 (47%), Gaps = 43/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M +     P + ++++L  C  K+      L L + +   GL  D++ +S L
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FC  G +  G  +   +LR   +PN VT++ L++GL    R  EA+ +         
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV  Y  L +GLC+ G    A+ + + M     E      P T+TYN +++GLCKE  
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE------PGTLTYNVVVNGLCKEDR 340

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTF 326
           +D A  +   M  +   PD VTY ++++G C A   +EA  L+  ++ +   V+PDV T 
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400

Query: 327 SVIMDELCKNGKMDKASR-----------------------------LLE-LMIWR---- 352
           + ++  LCK G++  A+R                             L+E L +W+    
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460

Query: 353 -GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G +PN+ TY+ +I+G C    +  AR LF  M+ +G    V+ YN L+   C+   +E+
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A SL+ EM +      VV++N +  G  +   V+ A +L  EM    +  D  T++  I+
Sbjct: 521 ARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              K G + EA+ L+  +    +   +V ++ L+ G
Sbjct: 581 RFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 205/420 (48%), Gaps = 10/420 (2%)

Query: 78  GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           G+GDI   T  E   +FD MLR   SP  V +++ L   L +   +     + K + + G
Sbjct: 232 GEGDIE--TGRE---LFDEMLRRKVSPN-VVTYSCLMQGLGRTGRWREASEMLKDMTARG 285

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           + PD+  +++L +  CK GR      VL  +++    P  +T+  ++ GLC E R+ +A 
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            +         +PD  TYNTL+ GLC  G    A++L++ + +   +F V  KP+  T N
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE--KFHV--KPDVFTCN 401

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I GLCKEG V  A  +   M +  +  ++VTY  +I G+  A    EA +L+   ++ 
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P+ +T+SV+++ LCK   +  A  L   M   G+ P    YN L+   C  D ++ A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           R LF  M +     DVVS+N +I+   K  DV+ A  L SEM    + P  VT++ L   
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             ++  ++ A+ L+++M           +++ + G    G   + + L   + D    L+
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLD 641



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 189/374 (50%), Gaps = 12/374 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L   L KN      + +   +   G  P   T+++++N  CK  R+   F V
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGV 347

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
           +  +++    P+AVT+ +L+KGLC   +I EA  L+       F  +PDVFT N LI GL
Sbjct: 348 VEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    A  +   M     E G+  + N VTYN +I+G      + +A +L+    + 
Sbjct: 408 CKEGRVHDAARIHSSMV----EMGL--QGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             +P+ +TY+ +I G C     + A+ LF +M D G++P V+ ++ +M  LC+   +++A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 343 SRLLELMIWRGVNPN--TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
             L + M  R VN N    ++N +IDG      +  A++L   M     + D V+++ LI
Sbjct: 522 RSLFQEM--RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N + K   ++EA+ LY +M+S G  P VV +++L  G     + E+ + L  +M    V 
Sbjct: 580 NRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVV 639

Query: 461 ADTYTYNNFIDGLC 474
            D+   +  +  LC
Sbjct: 640 LDSKLTSTILACLC 653



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 163/337 (48%), Gaps = 9/337 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+    ++LI  L    +     +++ K       P   + + L      T H   A ++
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD--ENINPDVVTYT 292
              M      FGV    N    N ++ G C+ G  DKA  LF +MK   + + PD VTY 
Sbjct: 100 LSLMTKRG--FGV----NVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYN 153

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           +++ GFC A    EA+ LF  M   G  +P++VT+SV++D  CK+G++ +   LLE M  
Sbjct: 154 TLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER 213

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G+  + + Y++LI  +C    I+  R+LF  M       +VV+Y+ L+    +     E
Sbjct: 214 EGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWRE 273

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  +  +M ++G++P VV Y  L  GL +  +   A+K+ D M +      T TYN  ++
Sbjct: 274 ASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK   + +A  +   +     + + V+YN L+ GL
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGL 370


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 204/370 (55%), Gaps = 8/370 (2%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ +I+ FCK+ R+     VL R+    F P+ VT+  +I  LC   ++  A  +
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNT 258
             +  +  C P V TY  LI      G    A+ L EEM A G         P+  TYN 
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------LLPDMYTYNA 247

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           II G+CKEG V++A EL   +  +   PDV++Y  ++R F     W+E ++L  EM  +G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +P+ VT+S+++  LC+ G++D+A  +L++MI + + P+TY+Y+ LI   C   ++D A 
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +   M SNGC+ D+V+YNT++   CKN +  +AL +++++   G  P V +YNT+   L
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           +      RAL +   M    V  D  TYN+ I  LC+ G V EA+ L   +  S +   +
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 487

Query: 499 VSYNCLIDGL 508
           +SYN ++ GL
Sbjct: 488 ISYNIVLLGL 497



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 191/385 (49%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NI+ G L   +     L +  +L      P + T++ILI      G ++    +
Sbjct: 170 PDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKL 229

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+  T+ ++I+G+C E  +  AA L T      C+PDV +YN L+     
Sbjct: 230 LEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLN 289

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G       L  EM      F   C+PN VTY+ +I  LC+ G +D+A  +   M ++ +
Sbjct: 290 QGKWDEGEKLVAEM------FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 343

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y  +I   C     + A  +   M+  G  PD+V ++ I+  LCKNG  ++A  
Sbjct: 344 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 403

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   +   G  PN  +YNT+I           A  +  +M S G   D ++YN+LI+  C
Sbjct: 404 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC 463

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++  VEEA+ L  +M   G +PTV++YN + LGL ++ +++ A+ +F EM       +  
Sbjct: 464 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 523

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           TY   I+G+  +G+  EA+EL  ++
Sbjct: 524 TYILLIEGIGFAGWRTEAMELANSL 548



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 198/406 (48%), Gaps = 10/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K    +    +  R+ + G  PDI T++I+I   C   ++     V
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     P  +T+T LI+    E  I EA  L  +       PD++TYN +I G+C+
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L   + +        CKP+ ++YN ++     +G  D+ ++L  +M     
Sbjct: 255 EGMVERAAELITSLTSKG------CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY+ +I   C     +EA  +   M+++ + PD  ++  ++  LCK G++D A  
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN--W 402
           +++ MI  G  P+   YNT++   C     + A ++F  +   GC  +V SYNT+I+  W
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C   D   AL +   M+SKG+ P  +TYN+L   L     VE A+ L D+M ++     
Sbjct: 429 SC--GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +YN  + GLCK   + +A+ +F  + +     N  +Y  LI+G+
Sbjct: 487 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 168/367 (45%), Gaps = 54/367 (14%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG------LCAESRIMEAAALFT 201
           L+N  CK G+ +     L  ++   +TP+ +  T LIKG      +   SR+ME   +  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME---ILE 130

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
            H     EPDVF                                          YN +I 
Sbjct: 131 SHT----EPDVFA-----------------------------------------YNAVIS 145

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G CK   ++ A ++  +MK     PD+VTY  +I   C       A ++  +++     P
Sbjct: 146 GFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMP 205

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
            V+T++++++     G +++A +LLE M+ RG+ P+ YTYN +I G C    ++ A +L 
Sbjct: 206 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 265

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            S+ S GC  DV+SYN L+  +      +E   L +EM S+G +P  VTY+ L   L   
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 325

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ A+ +   M    +  DTY+Y+  I  LCK G +  A+ +   +  +    +IV+Y
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385

Query: 502 NCLIDGL 508
           N ++  L
Sbjct: 386 NTILAAL 392



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NIL         +D    L   + S G  P+  T+SILI+  C+ GR+     V
Sbjct: 275 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 334

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++    TP+  ++  LI  LC E R+  A  +        C PD+  YNT++  LC+
Sbjct: 335 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 394

Query: 225 TGHTIVALNLFEEM----------------------ANGNGEFGVV-------CKPNTVT 255
            G+   AL +F ++                       + +   G+V         P+ +T
Sbjct: 395 NGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEIT 454

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I  LC++G V++A  L   M+     P V++Y  V+ G C     ++A  +F EM+
Sbjct: 455 YNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMI 514

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           ++G +P+  T+ ++++ +   G   +A  L   +  R V
Sbjct: 515 EKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 553



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL IF+  LR    PP VSS+N +   L         L +   + S G+ PD  T++ 
Sbjct: 399 NQALEIFNK-LRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNS 457

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+C C+ G V     +L  + +S F P  +++  ++ GLC   RI +A  +F +     
Sbjct: 458 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 517

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNL 234
           C P+  TY  LI G+   G    A+ L
Sbjct: 518 CRPNETTYILLIEGIGFAGWRTEAMEL 544


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 239/460 (51%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + +++ +   L K +  D   +  +++ + G+
Sbjct: 234 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD +T++ LI  +   G+      V   + R    P+ V   +L+  LC   +I EA  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--------- 249
           +F    +    PDVF+Y  ++NG    G  +   +LF+ M  G+G   V+C         
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAY 406

Query: 250 ---------------------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KP+ VTY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L  E+M+ G++ D+V F  I++ LCK G++  A  + +L
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G++P+   YN L+DGYCL  K++ A ++F +M S G   +VV Y TL+N YCK   
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML KGIKP+ + YN +  GLFE  +   A   F EM  + +A +  TY+ 
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + GL K+    EA+ LF+ +R    +++I++ N +I G+
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 228/477 (47%), Gaps = 63/477 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG 137
           + P EA  + D + R   +P      N     LA+              ++LF R  S  
Sbjct: 45  LRPEEAHDLLDELQR-RGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRA 103

Query: 138 -----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                L P  YT++IL++C  +  R        G++LR+    +A+  + L+KG C   R
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163

Query: 193 IMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  +   HR     C PDVF+YN L+  LC  G +  A +L   MA G    G VC 
Sbjct: 164 TDEALDILL-HRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG----GTVCS 218

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA--------- 301
           P+ V YNT+IDG  KEG V+KA +LF +M    I PD+VTY+SV+   C A         
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 302 --------------------------NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                       W EA R+F EM  Q + PDVV  + +M  LCK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCMH 391
            GK+ +A  + + M  +G NP+ ++Y  +++GY    CL D  D    LF  M  +G   
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD----LFDLMLGDGIAP 394

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            + ++N LI  Y     +++A+ +++EM   G+KP VVTY T+   L  I +++ A++ F
Sbjct: 395 VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    V  D Y Y+  I G C  G +L+A EL   I ++   L+IV +  +I+ L
Sbjct: 455 NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 221/457 (48%), Gaps = 23/457 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK---YGKIK-----EARDVFDTM- 352

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+ I+    A       +  LF  +   G+ P I T ++LI  +   G +
Sbjct: 353 AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 412

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+ ++I  LC   ++ +A   F +       PD + Y+ L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N NG      + + V + +II+ LCK G V  A+ +F  
Sbjct: 473 IQGFCTHGSLLKAKELISEIMN-NG-----MRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++PD V Y  ++ G+C      +A R+F  M+  G++P+VV +  +++  CK G+
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ +G+ P+T  YN +IDG     +   A+  F  M  +G   +  +Y+ 
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 706

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           +     TY+  I  L K G V EA ++F +++++  E
Sbjct: 707 LVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 743



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 193/414 (46%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P + +FN+L    A     D  + +F  +   G+ P + T+  +I   
Sbjct: 383 LFDLMLG-DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             + ++IN LC+ G  + A N+F+   N      V   P+ V YN ++DG C  G ++KA
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+VV Y +++ G+C     +E   LF EM+ +G++P  + +++I+D 
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  N  TY+ ++ G       D A  LF  + +     D
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I    + + VEEA  L++ +   G+ P  VTY+ +   L +   VE A  +F 
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFS 735

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      D+   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 736 SMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 789



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y +  
Sbjct: 413 DKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F S+I  LC   R+M+A  +F       
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   YN L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIG 585

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M  + I P  + Y  +I G   A     AK  F EM + G+  +  T+S
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  +  T NT+I G   T +++ A+ LF S+  +
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +   V+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 806


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/405 (35%), Positives = 204/405 (50%), Gaps = 45/405 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+  F+ ML M P PPP   FN +   L KNK Y TV+SLFK+    G+ PD+ T SI
Sbjct: 40  HHAVASFNLMLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSI 98

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC    ++  F V   IL+  F P+A+T  +LIKGLC    I +      +     
Sbjct: 99  LINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQG 158

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  +Y TLINGLC+ G T     L  ++       G   KP+ V YNTII+ LCK  
Sbjct: 159 FQLDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNK 212

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +++ +M  + I+PDVVTYT++I GFC      EA  L  EM  + + PDV TFS
Sbjct: 213 LLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFS 272

Query: 328 VIMDEL--------------------------------------CKNGKMDKASRLLELM 349
           V++D L                                      CKN  +++A  LL+ M
Sbjct: 273 VLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM 332

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G+ P+ Y+Y  L+DG C   +++ A++ F  +   GC  +V  YN +IN  CK    
Sbjct: 333 KEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLF 392

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            EA+ L S+M  KG  P  +T+ T+   L E  + ++A K+  EM
Sbjct: 393 GEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 172/337 (51%), Gaps = 9/337 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P    F +++  L    R     +LF +       PD+ T + LIN  C   H  +A ++
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F  +            P+ +T NT+I GLC  G + K      ++  +    D V+Y ++
Sbjct: 116 FANILKRGFH------PDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTL 169

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C A +     RL  ++    V+PDVV ++ I++ LCKN  +  A  +   MI +G+
Sbjct: 170 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 229

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK---NKDVEE 411
           +P+  TY TLI G+C+  K+  A  L   M+      DV +++ LI+   K    K V+E
Sbjct: 230 SPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDE 289

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A+SL+ EM  K + P +VTYN+L  GL + H +ERA+ L  EM+ + +  D Y+Y   +D
Sbjct: 290 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 349

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G +  A E F+ +      LN+  YN +I+GL
Sbjct: 350 GLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGL 386



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 200/448 (44%), Gaps = 52/448 (11%)

Query: 17  ISALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKS 76
           +  LR +    +P    PT+++     S P        S  L +  R     FL     S
Sbjct: 7   LRTLRLSLFPPYPPIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILS 66

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLN 134
           S      L+       +     +  P+   P + + +IL  C     H     S+F  + 
Sbjct: 67  S------LVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120

Query: 135 SAGLFPDIYTHSILINCFC--------------------KMGRVSHGFVVLG-------- 166
             G  PD  T + LI   C                    ++ +VS+G ++ G        
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180

Query: 167 ---RILRS----CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
              R+LR        P+ V + ++I  LC    + +A  ++++  V    PDV TY TLI
Sbjct: 181 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 240

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG---FVDKAKELF 276
           +G C  G    A +L  EM   N        P+  T++ +ID L KEG    VD+A  LF
Sbjct: 241 HGFCIMGKMKEAFSLLNEMKLKN------INPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +MK +N+ PD+VTY S+I G C  +    A  L  EM + G+QPDV ++++++D LCK 
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A    + ++ +G + N + YN +I+G C       A  L   ME  GCM + +++
Sbjct: 355 GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITF 414

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGI 424
            T+I    +  + ++A  +  EM+++G+
Sbjct: 415 RTIICALSEKDENDKAEKILREMIARGL 442



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 147/287 (51%), Gaps = 9/287 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K      V  L ++L    + PD+  ++ +IN  CK   +     V   +
Sbjct: 165 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+ VT+T+LI G C   ++ EA +L  + ++    PDV+T++ LI+ L + G  
Sbjct: 225 IVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKK 284

Query: 229 IV---ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
            +   A++LFEEM + N        P+ VTYN++IDGLCK   +++A  L  +MK+  I 
Sbjct: 285 KMVDEAMSLFEEMKHKN------MIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PDV +YT ++ G C       AK  F  ++ +G   +V  ++V+++ LCK G   +A  L
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDL 398

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              M  +G  PN  T+ T+I      D+ D A K+   M + G + +
Sbjct: 399 KSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLLKE 445



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%)

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           LM+     P T+ +N ++       +      LF   E NG   D+ + + LIN +C   
Sbjct: 48  LMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQA 107

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  A S+++ +L +G  P  +T NTL  GL    ++++ L   D++       D  +Y 
Sbjct: 108 HITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYG 167

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I+GLCK+G       L R +     + ++V YN +I+ L
Sbjct: 168 TLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSL 208


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 226/421 (53%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A C+FD ML    SP  ++   +L G  +  K  + +  +F+++   G+ PD+ T++ 
Sbjct: 223 DKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAI-GIFRKMCRDGVEPDVVTYNT 281

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CK GR      V   +++    P++  + +L+ G   E  +++   L        
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD + +N LI    + G    A+  F +M            PN VTY T++D LC+ G
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG------LHPNIVTYGTVMDALCRVG 395

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A   F ++  E + P+ V + ++I G C  + W++A+ L +EM+ +G+ P+ + F+
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ LCK G + +A  + +LM+   V  +  TY TLIDGYCL  K+D A KL   M  +
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V+YNT+IN YCKN  +E+A SL+ +M SKG+ P +V Y+T+  GLF+  ++  A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+  M +  +     TYN  + GLC++    +AL +F  +    + L   ++N +ID 
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635

Query: 508 L 508
           L
Sbjct: 636 L 636



 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 228/451 (50%), Gaps = 45/451 (9%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD +LR   +   +   N     +A+       LSLF R+  A    D+ T+SI+I C 
Sbjct: 54  LFDELLRRDTTS--IFDLNSALSAVARESPA-VALSLFNRMPRA----DLCTYSIVIGCC 106

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKHRVFACEPD 211
            + G +   F  LGR++R+ +T  A+TF+ L+KGLC + R  +A  +   +     C P+
Sbjct: 107 SRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPN 166

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
            F+YN L+ GLC    +  AL+L   M   +   G  C P+ V+Y T+I+GL +EG +DK
Sbjct: 167 AFSYNILLKGLCDENRSQQALHLLHTMMADDTRGG--CPPDVVSYTTVINGLLREGQLDK 224

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A  LF +M D+ ++P+ +TY  ++ G+C +    EA  +F +M   GV+PDVVT++ +M 
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCKNG+  +A ++ + M+ +G  P++  Y TL+ GY     +    +L   M  NG   
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQP 344

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D   +N LI  Y K+  V+EA+  +S+M  +G+ P +VTY T+   L  + +V+ A+  F
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQF 404

Query: 452 D-----------------------------------EMRRNHVAADTYTYNNFIDGLCKS 476
           D                                   EM    +  +T  +N  ++ LCK 
Sbjct: 405 DRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKE 464

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G V  A  +F  +     + ++++Y  LIDG
Sbjct: 465 GMVTRAKNIFDLMVRVDVQCDVITYTTLIDG 495



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 205/417 (49%), Gaps = 15/417 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+R + + P    FNIL G  AK+   D  +  F ++   GL P+I T+  +++  
Sbjct: 333 LLDVMVR-NGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G+V        R++    TPN V F +LI GLCA  +  +A  L  +       P+ 
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             +NTL+N LC+ G    A N+F+ M        V  + + +TY T+IDG C +G VD+A
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDLMVR------VDVQCDVITYTTLIDGYCLDGKVDEA 505

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L   M  + + P+ VTY ++I G+C      +A  LF +M  +GV P +V +S I+  
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHG 565

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L +  ++  A  L   MI  G+     TYN ++ G C  +  D A ++F     N C+ D
Sbjct: 566 LFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMF----HNLCLID 621

Query: 393 V----VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                 ++N +I+   K    +EA  L++ +L++G+ P VVTY  +   L E   +E   
Sbjct: 622 FHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 681

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            LF  + +N   AD+   N  +  L + G V +A      I ++ + L   +   L+
Sbjct: 682 DLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 211/403 (52%), Gaps = 10/403 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F IL   L ++   +    L  R+   G  PD   ++ LI+ + K       F  
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++++   P  VT+T+++ GLC   R  +A  L  + R   C P+++TYN ++ GLC 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + EEMA   G F     P+ VTYN+ I GLCK   VD+A++   +M    +
Sbjct: 128 ERKLDEAKKMLEEMAV-RGYF-----PDVVTYNSFIKGLCKCDRVDEARKFLARMP---V 178

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVV+YT+VI G C + D + A R+  +M ++G  PDVVT+S ++D  CK G++++A  
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M+  G  PN   YN+L+        I  A  + V ME  G   DVVSYN  I+  C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K + V++A +++  M+ +G  P   +Y+ L   L +  +++ A+ L ++ R  +   D  
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNIVSYNCLID 506
            Y   +DGLCK G   EA  LF  + D K  E ++  YN ++D
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 401



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 199/369 (53%), Gaps = 9/369 (2%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD +T +IL+   C+  ++     +LGR+      P+   + +LI G        +A   
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C P V TY  +++GLC+ G T  A+ L +EM +        C PN  TYN I
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG------CSPNIYTYNVI 121

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ++GLC+E  +D+AK++  +M      PDVVTY S I+G C  +  +EA++    M    V
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PV 178

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PDVV+++ +++ LCK+G +D ASR+L+ M  RG  P+  TY++LIDG+C   +++ A  
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L  SM   GC  ++V+YN+L+    +   + +A  +  EM  +G  P VV+YN    GL 
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  +V++A  +FD M       +  +Y+  ++ LCK   + +A+ L    R+    ++I+
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 500 SYNCLIDGL 508
            Y  L+DGL
Sbjct: 359 LYTVLLDGL 367



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 215/422 (50%), Gaps = 12/422 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ + D M R     P + ++N++   L + +  D    + + +   G FPD+ T++ 
Sbjct: 97  KDAVKLLDEM-RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   CK  RV      L R+     TP+ V++T++I GLC    +  A+ +  +     
Sbjct: 156 FIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TY++LI+G C+ G    A+ L + M        + C+PN V YN+++  L + G
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSM------LKLGCRPNMVAYNSLLGALHRLG 266

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + KA+++ ++M+     PDVV+Y + I G C A    +AK +F  M+++G  P+  ++S
Sbjct: 267 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 326

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS-MES 386
           ++++ELCK  ++D A  L+E    +    +   Y  L+DG C   + D A  LF   ++ 
Sbjct: 327 MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C  DV  YN +++ +CK + +++AL ++ +ML +     VVT+N L  GL    ++  
Sbjct: 387 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSD 445

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  +   M       D  TY   +D +CK G    ALELF          ++V+Y+ LI 
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 505

Query: 507 GL 508
           GL
Sbjct: 506 GL 507



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 9/302 (2%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
           +C+PD FT+  L+ GLCR+     A  L   M     E G  C P+   YN +I G  K 
Sbjct: 5   SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMK----EMG--CVPDDAIYNALISGYSKA 58

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
               +A +   +M   +  P VVTYT+++ G C A    +A +L  EM D+G  P++ T+
Sbjct: 59  KDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTY 118

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +VI++ LC+  K+D+A ++LE M  RG  P+  TYN+ I G C  D++D ARK    M  
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV 178

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                DVVSY T+IN  CK+ D++ A  +  +M ++G  P VVTY++L  G  +  +VER
Sbjct: 179 T---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVER 235

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A+ L D M +     +   YN+ +  L + G + +A ++   +    +  ++VSYN  ID
Sbjct: 236 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295

Query: 507 GL 508
           GL
Sbjct: 296 GL 297



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 207/413 (50%), Gaps = 16/413 (3%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           ++ RM P  P V S+  +   L K+   D+   +  ++ + G  PD+ T+S LI+ FCK 
Sbjct: 172 FLARM-PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKG 230

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G V     +L  +L+    PN V + SL+  L     I +A  +  +       PDV +Y
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N  I+GLC+      A  +F+ M          C PN  +Y+ +++ LCK+  +D A  L
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERG------CTPNASSYSMLVEELCKKKELDDAITL 344

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELC 334
             + +++    D++ YT ++ G C    ++EA  LF +++D+ + +PDV  ++V++D  C
Sbjct: 345 VEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 404

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K  ++DKA ++ + M+ R    N  T+N L+ G C+ D++  A  + ++M   G + D V
Sbjct: 405 KRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV 463

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y TL++  CK      AL L+ E +  G  P VVTY+ L  GL   +  E A  LF ++
Sbjct: 464 TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                  D   +N  I G  ++G     L+LF  + +S  E N  ++   I G
Sbjct: 524 -------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISG 569



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 164/397 (41%), Gaps = 77/397 (19%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ + D ML++   P  V+ +N L G L +  H      +   +   G  PD+ +++  I
Sbjct: 236 AMGLLDSMLKLGCRPNMVA-YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNA-------------------------------- 177
           +  CK  RV     V  R++    TPNA                                
Sbjct: 295 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQI 354

Query: 178 ---VTFTSLIKGLCAESRIMEAAALFTK---HRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              + +T L+ GLC   R  EA ALF+K    ++  CEPDVF YN +++  C+      A
Sbjct: 355 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI--CEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L + ++M   N      C  N VT+N ++ GLC +  +  A+ + L M DE   PD VTY
Sbjct: 413 LQIHKQMLERN-----CC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 465

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL------------------ 333
            +++   C       A  LF E +  G  PDVVT+S ++  L                  
Sbjct: 466 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDV 525

Query: 334 ----------CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL-TDKIDHARKLFV 382
                      +NG  D   +L   +I   V PN  T+   I G  +  + +  AR LF 
Sbjct: 526 ALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFD 585

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
                G   D+   NTLI+ + K  D+EEA  ++  M
Sbjct: 586 RAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 18/280 (6%)

Query: 110 FNILFGCLAKNKHYDTVLSLF-KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + +L   L K   +D   +LF K L+     PD++ ++++++  CK  ++     +  ++
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419

Query: 169 L-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           L R+C   N VT+  L+ GLC + R+ +A  +          PD  TY TL++ +C+ G 
Sbjct: 420 LERNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           +  AL LFEE   G       C P+ VTY+ +I GL  E   ++A  LF K+       D
Sbjct: 478 SAAALELFEEAVKGG------CVPDVVTYSALITGLVHENMAEEAYLLFTKL-------D 524

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV-IMDELCKNGKMDKASRLL 346
           V  + ++I G+      +   +LF+E+++  V+P+  TF   I  +L K   + KA  L 
Sbjct: 525 VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF 584

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +  +  G  P+ +  NTLID +     ++ AR++F SM+ 
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 3/229 (1%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M D++  PD  T+  ++RG C +N   +A++L   M + G  PD   ++ ++    K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
             +A + L  M+     P   TY  ++DG C   +   A KL   M   GC  ++ +YN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++   C+ + ++EA  +  EM  +G  P VVTYN+   GL +  +V+ A K    + R  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           V  D  +Y   I+GLCKSG +  A  +   + +     ++V+Y+ LIDG
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDG 226



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 3/195 (1%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+D+  QPD  TF++++  LC++ +++KA +LL  M   G  P+   YN LI GY     
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A K    M  N C+  VV+Y  +++  CK    ++A+ L  EM  KG  P + TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL E  +++ A K+ +EM       D  TYN+FI GLCK   V EA +    +  + 
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 494 YELNIVSYNCLIDGL 508
              ++VSY  +I+GL
Sbjct: 181 ---DVVSYTTVINGL 192


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 238/460 (51%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP   +++ +   L K +  D   +  +++ + G+
Sbjct: 232 EGDVN-----KACDLFKEMVQ-RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++ LI  +   G+      V   + R    P+ VTF  L+  LC   +I EA  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--------- 249
           +F    +    PDVF+YN ++NG    G  +   +LF+ M  G+G   V+C         
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAY 404

Query: 250 ---------------------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KPN +TY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L  E+M+ G+  D+V FS I++ LCK G++  A  + +L
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G++P    Y+ L+DGYCL  K++ A ++F +M S G   + V Y TL+N YCK   
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML KGIKP+ + YN +  GLFE  +   A   F EM  + +A +  TY+ 
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + GL K+    EA+ LF+ +R    +++I++ N +I G+
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 217/428 (50%), Gaps = 55/428 (12%)

Query: 127 LSLFKRLNSAG-----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           ++LF R  S       L P  +T++IL++C  +  R        G++LR+    + +   
Sbjct: 91  VALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIAN 150

Query: 182 SLIKGLCAESRIMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            L+KG C   R  EA  +   HR     C PDVF+Y+ L+  LC  G +  A +L   MA
Sbjct: 151 HLLKGFCEAKRTDEALDILL-HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
            G    G VC P+ V YNT+IDG  KEG V+KA +LF +M    I PD VTY+SV+   C
Sbjct: 210 EG----GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 300 YA-----------------------------------NDWNEAKRLFIEMMDQGVQPDVV 324
            A                                     W EA R+F EM  Q + PDVV
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVV 325

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKL 380
           TF+++M  LCK GK+ +A  + + M  +G NP+ ++YN +++GY    CL D  D    L
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD----L 381

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M  +G    + ++N LI  Y     +++A+ +++EM   G+KP V+TY T+   L  
Sbjct: 382 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           I +++ A++ F++M    VA D Y Y+  I G C  G +L+A EL   I ++   L+IV 
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVL 501

Query: 501 YNCLIDGL 508
           ++ +I+ L
Sbjct: 502 FSSIINNL 509



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 219/457 (47%), Gaps = 23/457 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +    +   CK    G I      EA  +FD M 
Sbjct: 300 SSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK---YGKIK-----EARDVFDTM- 350

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+NI+    A       +  LF  +   G+ P I T ++LI  +   G +
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 410

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      PN +T+T++I  LC   ++ +A   F +       PD + Y+ L
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N      +V       +++II+ LCK G V  A+ +F  
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIV------LFSSIINNLCKLGRVMDAQNIFDL 524

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++P  V Y+ ++ G+C      +A R+F  M+  G++P+ V +  +++  CK G+
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ +G+ P+T  YN +IDG     +   A+  F  M  +G   +  +Y+ 
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 704

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           +     TY+  I  L K G V EA ++F +++++  E
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 195/414 (47%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P + +FN+L    A     D  + +F  +   G+ P++ T++ +I   
Sbjct: 381 LFDLMLG-DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             ++++IN LC+ G  + A N+F+   N      V   P  V Y+ ++DG C  G ++KA
Sbjct: 500 VLFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+ V Y +++ G+C     +E   LF EM+ +G++P  + +++I+D 
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  N  TY+ ++ G       D A  LF  + +     D
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I    + + VEEA  L++ +   G+ P VVTY+ +   L +   VE A  +F 
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      D+   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 734 SMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 203/423 (47%), Gaps = 8/423 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  AL  F  +LR       + + ++L G     +  + +  L  R    G  PD++++S
Sbjct: 127 PELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYS 186

Query: 147 ILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           IL+   C  G+      +L  +    +  +P+ V + ++I G   E  + +A  LF +  
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 246

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                PD  TY+++++ LC+      A     +M N     GV+  PN  TYN +I G  
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK----GVL--PNNWTYNNLIYGYS 300

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
             G   +A  +F +M+ ++I PDVVT+  ++   C      EA+ +F  M  +G  PDV 
Sbjct: 301 STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           +++++++     G +   + L +LM+  G+ P   T+N LI  Y     +D A  +F  M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
             +G   +V++Y T+I   C+   +++A+  +++M+ +G+ P    Y+ L  G      +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
            +A +L  E+  N +  D   +++ I+ LCK G V++A  +F    +       V Y+ L
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 505 IDG 507
           +DG
Sbjct: 541 MDG 543



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 186/401 (46%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y +  
Sbjct: 411 DKAMIIFNEM-RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F+S+I  LC   R+M+A  +F       
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNDVVYGTLVNGYCKIG 583

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M  + I P  + Y  +I G   A     AK  F EM + G+  +  T+S
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 643

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  +  T NT+I G   T +++ A+ LF S+  +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +  VV+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 241/460 (52%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + ++N +   L K +  D   +  +++ +  +
Sbjct: 245 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 298

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++ LI  +   G+      V   + R    P+ VT + L+  LC   +I EA  
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 358

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGVV---- 248
           +F    +    PDVF+YN ++NG    G  +   +LF+ M  G+G       F V+    
Sbjct: 359 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAY 417

Query: 249 --------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KP+ VTY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 418 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L  E+M+ G+  D+V FS I++ LCK G++  A  + +L
Sbjct: 478 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 537

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G++P+   Y+ L+DGYCL  K++ A ++F +M S G   +VV Y TL+N YCK   
Sbjct: 538 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 597

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML +GIKP+ + Y+ +  GLF+  +   A   F EM  + +A D  TYN 
Sbjct: 598 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNI 657

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + GL K+    EA+ LF+ +R    ++NI++ N +IDG+
Sbjct: 658 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 229/477 (48%), Gaps = 63/477 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG 137
           + P EA  + D + R   +P      N     LA+              ++LF R  S  
Sbjct: 56  LRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRA 114

Query: 138 -----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                L P  +T++IL++C  +  R        G++LR+    N +    L++G C   R
Sbjct: 115 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 174

Query: 193 IMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  +   HR     C PDVF+Y+ L+  LC  G +  A +L   MA G    G VC 
Sbjct: 175 TDEALDILL-HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 229

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA--------- 301
           PN V YNT+IDG  KEG V+KA +LF +M    I PD+VTY SV+   C A         
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289

Query: 302 --------------------------NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                       W EA R+F EM    + PDVVT S++M  LCK
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCMH 391
            GK+ +A  + + M  +G NP+ ++YN +++GY    CL D  D    LF  M  +G   
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD----LFDLMLGDGIAP 405

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D  ++N LI  Y     +++A+ +++EM   G+KP VVTY T+   L  I +++ A++ F
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    VA D Y YN  I G C  G +L+A EL   I ++   L+IV ++ +I+ L
Sbjct: 466 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 211/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R H   P V + ++L G L K         +F  +   G  PD+++++I+
Sbjct: 320 EAVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 378

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +   G +     +   +L     P+  TF  LIK       + +A  +F + R    
Sbjct: 379 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 438

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY T+I  LCR G    A+  F +M +     GV   P+   YN +I G C  G 
Sbjct: 439 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYNCLIQGFCTHGS 492

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KAKEL  ++ +  ++ D+V ++S+I   C      +A+ +F   ++ G+ PD V +S+
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  C  GKM+KA R+ + M+  G+ PN   Y TL++GYC   +ID    LF  M   G
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                + Y+ +I+   +      A   + EM   GI   + TYN +  GLF+    + A+
Sbjct: 613 IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF E+R  +V  +  T N  IDG+ ++  V EA +LF +I  S+   N+V+Y+ +I  L
Sbjct: 673 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNL 732



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 225/459 (49%), Gaps = 23/459 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 313 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK---YGKIK-----EARDVFDTMA 364

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+NI+    A       +  LF  +   G+ PD YT ++LI  +   G +
Sbjct: 365 -MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+ ++I  LC   ++ +A   F +       PD + YN L
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N      +V       +++II+ LCK G V  A+ +F  
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKLGRVMDAQNIFDL 537

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++PD V Y+ ++ G+C      +A R+F  M+  G++P+VV +  +++  CK G+
Sbjct: 538 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 597

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ RG+ P+T  Y+ +IDG     +   A+  F  M  +G   D+ +YN 
Sbjct: 598 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNI 657

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 658 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 717

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           +  +  TY+  I  L K G V EA ++F +++++  E N
Sbjct: 718 LVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 195/414 (47%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P   +FN+L    A     D  + +F  +   G+ PD+ T+  +I   
Sbjct: 394 LFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 452

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 453 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 512

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             ++++IN LC+ G  + A N+F+   N      V   P+ V Y+ ++DG C  G ++KA
Sbjct: 513 VFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYSMLMDGYCLVGKMEKA 566

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+VV Y +++ G+C     +E   LF EM+ +G++P  + +S+I+D 
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  +  TYN ++ G       D A  LF  + +     +
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I+   + + VEEA  L++ +    + P VVTY+ +   L +   VE A  +F 
Sbjct: 687 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFS 746

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      ++   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 747 SMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 800



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y ++ 
Sbjct: 424 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F+S+I  LC   R+M+A  +F       
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVVYCTLVNGYCKIG 596

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M    I P  + Y+ +I G   A     AK  F EM + G+  D+ T++
Sbjct: 597 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYN 656

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  N  T NT+IDG   T +++ A+ LF S+  +
Sbjct: 657 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             + +VV+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 777 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 817


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 230/453 (50%), Gaps = 39/453 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +AL + D MLR     P V ++ +L   + K+  +   + +   + + G  P+I T+++
Sbjct: 154 GDALSLLDDMLR-RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNV 212

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  C+  RV     +L R+    F P+ V++T+++KGLCA  R  +   LF +     
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  T++ L+   CR G    A+ + + M+    E G  C  NT   N +I+ +CK+G
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS----EHG--CTANTTLCNIVINSICKQG 326

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A E    M     +PD ++YT+V++G C A  W +AK L  EM+ +   P+ VTF+
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVN-------------------------------- 355
             +  LC+ G +D+A  L+E M   G +                                
Sbjct: 387 TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE 446

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY TL+ G C  +++D A +L   M  N C  +VV++N L++++C+   VEEA+ L
Sbjct: 447 PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIEL 506

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             +M+  G  P ++T+NTL  G+ E    E AL+L   +    ++ DT TY++ +D L +
Sbjct: 507 VQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSR 566

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              + EA+++F A++D       V YN ++  L
Sbjct: 567 EDRIEEAVQMFHAVQDMGMRPKAVMYNKILSAL 599



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 203/393 (51%), Gaps = 14/393 (3%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +         + +    +G   D++ ++ L+  +C+ GR+     ++  +      P+
Sbjct: 80  LCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPD 136

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
           A T+T LI+GLC   R+ +A +L        C+P V TY  L+  +C++     A+ + +
Sbjct: 137 AYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLD 196

Query: 237 EM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           EM A G       C PN VTYN II+G+C+E  VD A+++  ++      PD V+YT+V+
Sbjct: 197 EMRAKG-------CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           +G C A  W + + LF EM++    P+ VTF +++   C+ G +++A  +L+ M   G  
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            NT   N +I+  C   ++D A +   +M S GC  D +SY T++   C+    E+A  L
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            +EM+ K   P  VT+NT    L +   +++A+ L ++M     +    TYN  ++G C 
Sbjct: 370 LNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCV 429

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G V  ALELF ++     E N ++Y  L+ GL
Sbjct: 430 QGRVDSALELFNSL---PCEPNTITYTTLLTGL 459



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 209/421 (49%), Gaps = 18/421 (4%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C +    D+ ++        F  M+  +  P  V+ F++L     +  
Sbjct: 241 DTVSYTTVLKGLCAAKRWEDVEVL--------FCEMVENNCVPNEVT-FDMLVRFFCRGG 291

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             +  + +  R++  G   +    +I+IN  CK GRV   F  L  +     +P+ +++T
Sbjct: 292 MVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYT 351

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC   R  +A  L  +     C P+  T+NT I  LC+ G    A+ L E+M   
Sbjct: 352 TVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP-- 409

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             E+G  C    VTYN +++G C +G VD A ELF  +  E   P+ +TYT+++ G C+A
Sbjct: 410 --EYG--CSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHA 462

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              + A  L  EMM      +VVTF+V++   C+ G +++A  L++ M+  G  PN  T+
Sbjct: 463 ERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITF 522

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           NTL+DG       + A +L   + S G   D ++Y+++++   +   +EEA+ ++  +  
Sbjct: 523 NTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQD 582

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G++P  V YN +   L +  + +RA+  F  M  N    +  TY   I+GL + G + E
Sbjct: 583 MGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKE 642

Query: 482 A 482
           A
Sbjct: 643 A 643



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 163/328 (49%), Gaps = 9/328 (2%)

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
           +S ++ L A   + EAA L  +       PDV+    LI  LCR G T  A  +    A 
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL-RTAE 97

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
           G+G        +   YNT++ G C+ G +D A+ L   M    + PD  TYT +IRG C 
Sbjct: 98  GSGA-----PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCD 149

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                +A  L  +M+ +  QP VVT++V+++ +CK+    +A ++L+ M  +G  PN  T
Sbjct: 150 RGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVT 209

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN +I+G C  D++D AR++   + S G   D VSY T++   C  K  E+   L+ EM+
Sbjct: 210 YNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMV 269

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                P  VT++ L         VERA+++ D M  +   A+T   N  I+ +CK G V 
Sbjct: 270 ENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVD 329

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           +A E    +       + +SY  ++ GL
Sbjct: 330 DAFEFLNNMGSYGCSPDTISYTTVLKGL 357



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 170/344 (49%), Gaps = 9/344 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI+   + K    D        + S G  PD  +++ ++   C+ GR      +L  ++R
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR 375

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN VTF + I  LC +  I +A  L  +   + C   + TYN L+NG C  G    
Sbjct: 376 KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDS 435

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF  +          C+PNT+TY T++ GLC    +D A EL  +M   +   +VVT
Sbjct: 436 ALELFNSLP---------CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           +  ++  FC      EA  L  +MM+ G  P+++TF+ ++D + ++   ++A  LL  ++
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV 546

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            +G++ +T TY++++D     D+I+ A ++F +++  G     V YN +++  CK  + +
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETD 606

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            A+  ++ M+S    P   TY  L  GL     ++ A  +  E+
Sbjct: 607 RAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 10/298 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+R +  PP   +FN     L +    D  + L +++   G    I T++ L+N F
Sbjct: 369 LLNEMVRKN-CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGF 427

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  GRV     +   +   C  PN +T+T+L+ GLC   R+  AA L  +     C  +V
Sbjct: 428 CVQGRVDSALELFNSL--PC-EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+N L++  C+ G    A+ L ++M     E G  C PN +T+NT++DG+ ++   ++A
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMM----EHG--CTPNLITFNTLLDGITEDCNSEEA 538

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL   +  + I+ D +TY+S++      +   EA ++F  + D G++P  V ++ I+  
Sbjct: 539 LELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           LCK  + D+A      M+     PN  TY  LI+G      +  AR +   + S G +
Sbjct: 599 LCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 241/460 (52%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + ++N +   L K +  D   +  +++ +  +
Sbjct: 232 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 285

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++ LI  +   G+      V   + R    P+ VT + L+  LC   +I EA  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGVV---- 248
           +F    +    PDVF+YN ++NG    G  +   +LF+ M  G+G       F V+    
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAY 404

Query: 249 --------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KP+ VTY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L  E+M+ G+  D+V FS I++ LCK G++  A  + +L
Sbjct: 465 YAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDL 524

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G++P+   Y+ L+DGYCL  K++ A ++F +M S G   +VV Y TL+N YCK   
Sbjct: 525 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 584

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML +GIKP+ + Y+ +  GLF+  +   A   F EM  + +A D  TYN 
Sbjct: 585 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 644

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + GL K+    EA+ LF+ +R    ++NI++ N +IDG+
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684



 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 229/477 (48%), Gaps = 63/477 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG 137
           + P EA  + D + R   +P      N     LA+              ++LF R  S  
Sbjct: 43  LRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRA 101

Query: 138 -----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                L P  +T++IL++C  +  R        G++LR+    N +    L++G C   R
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 161

Query: 193 IMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  +   HR     C PDVF+Y+ L+  LC  G +  A +L   MA G    G VC 
Sbjct: 162 TDEALDILL-HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 216

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA--------- 301
           PN V YNT+IDG  KEG V+KA +LF +M    I PD+VTY SV+   C A         
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276

Query: 302 --------------------------NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                       W EA R+F EM    + PDVVT S++M  LCK
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCMH 391
            GK+ +A  + + M  +G NP+ ++YN +++GY    CL D  D    LF  M  +G   
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD----LFDLMLGDGIAP 392

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D  ++N LI  Y     +++A+ +++EM   G+KP VVTY T+   L  I +++ A++ F
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    VA D Y YN  I G C  G +L+A EL   I ++   L+IV ++ +I+ L
Sbjct: 453 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 211/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R H   P V + ++L G L K         +F  +   G  PD+++++I+
Sbjct: 307 EAVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 365

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +   G +     +   +L     P+  TF  LIK       + +A  +F + R    
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 425

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY T+I  LCR G    A+  F +M +     GV   P+   YN +I G C  G 
Sbjct: 426 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYNCLIQGFCTHGS 479

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KAKEL  ++ +  ++ D+V ++S+I   C      +A+ +F   ++ G+ PD V +S+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  C  GKM+KA R+ + M+  G+ PN   Y TL++GYC   +ID    LF  M   G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                + Y+ +I+   +      A   + EM   GI   + TYN +  GLF+    + A+
Sbjct: 600 IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF E+R  +V  +  T N  IDG+ ++  V EA +LF +I  S+   ++V+Y+ +I  L
Sbjct: 660 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 719



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 224/459 (48%), Gaps = 23/459 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 300 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK---YGKIK-----EARDVFDTMA 351

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+NI+    A       +  LF  +   G+ PD YT ++LI  +   G +
Sbjct: 352 -MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+ ++I  LC   ++ +A   F +       PD + YN L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N      +V       +++II+ LCK G V  A+ +F  
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKLGRVMDAQNIFDL 524

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++PD V Y+ ++ G+C      +A R+F  M+  G++P+VV +  +++  CK G+
Sbjct: 525 TVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGR 584

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ RG+ P+T  Y+ +IDG     +   A+  F  M  +G   D+ +YN 
Sbjct: 585 IDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 644

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSR 704

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           +     TY+  I  L K G V EA ++F +++++  E N
Sbjct: 705 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 196/414 (47%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P   +FN+L    A     D  + +F  +   G+ PD+ T+  +I   
Sbjct: 381 LFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             ++++IN LC+ G  + A N+F+   N      V   P+ V Y+ ++DG C  G ++KA
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYSMLMDGYCLVGKMEKA 553

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+VV Y +++ G+C     +E   LF EM+ +G++P  + +S+I+D 
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  +  TYN ++ G       D A  LF  + +     +
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I+   + + VEEA  L++ +    + P+VVTY+ +   L +   VE A  +F 
Sbjct: 674 IITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      ++   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 734 SMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 189/401 (47%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y ++ 
Sbjct: 411 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F+S+I  LC   R+M+A  +F       
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVVYCTLVNGYCKIG 583

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M    I P  + Y+ +I G   A     AK  F EM + G+  D+ T++
Sbjct: 584 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYN 643

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  N  T NT+IDG   T +++ A+ LF S+  +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             +  VV+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/478 (33%), Positives = 236/478 (49%), Gaps = 62/478 (12%)

Query: 59  TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLA 118
           T++DRA        R  S G  D        AL +FD +LR     P + S N     +A
Sbjct: 22  TIQDRA--------RVGSGGAED--------ALDVFDELLRRGIGAP-IRSLNGALADVA 64

Query: 119 KNKHYDTVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           ++     V S F R+  AG   + P ++T+ ILI C C  GR+  GF  LG +++  F  
Sbjct: 65  RDNPAAAV-SRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRV 123

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNL 234
             + F  L+KGLCA+ R  +A  +  +      C P+VF++  ++ GLC    +  AL L
Sbjct: 124 EPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALEL 183

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
              MA+  G     C PN V+Y+T+ DGL K G  DKA   + +M D  I P+VVTY+S+
Sbjct: 184 LHMMADDGGG----CLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSI 239

Query: 295 I-----------------------------------RGFCYANDWNEAKRLFIEMMDQGV 319
           I                                    GFC +    EA +   +M   GV
Sbjct: 240 IAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P+VVT+S  MD LCKNG+  +A ++   M+ RG+ P+  TY++L+ GY +   +     
Sbjct: 300 EPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHG 359

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF  M  +    D   +NTLI    K   V+EA+ ++S+M  +G+KP  VTYNTL  G  
Sbjct: 360 LFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYC 419

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYEL 496
           +I ++E AL LF EM  N V+ +  TYN  + GL ++G    A E + + I+  K +L
Sbjct: 420 KITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGKKDL 477



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 30/203 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++     L KN        +F  +   GL PDI T+S L++ +   G +     +
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++S   P+   F +LI     + ++ EA  +F+K R    +P+  TYNTLING C+
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCK 420

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK------ 278
                 AL LF+EM + NG       PN +TYN ++ GL + G    AKE +++      
Sbjct: 421 ITRMENALALFQEMVS-NG-----VSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSGK 474

Query: 279 ------------------MKDEN 283
                             M+D +
Sbjct: 475 KDLIEQGLLEELDDLFLSMEDND 497


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 212/373 (56%), Gaps = 7/373 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++YT++IL+   C  GR+     V+G +  +   PNAVT+ +L+   C    +  A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 197 AALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
             + +  R     +P++ T+N+++NGLC+ G    A  +F+EM            P+ V+
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVS 118

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT++ G CK G + ++  +F +M    + PDVVT+TS+I   C A +  +A  L  +M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++G++ + VTF+ ++D  CK G +D A   +E M   G+ P+   YN LI+GYC   ++D
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            AR+L   ME+     DVV+Y+T+I+ YCK  +++ A  L  +ML KG+ P  +TY++L 
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL E  ++  A +LF+ M +  V  D +TY   IDG CK G V +AL L   +      
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 496 LNIVSYNCLIDGL 508
            ++V+Y+ LI+GL
Sbjct: 359 PDVVTYSVLINGL 371



 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 225/456 (49%), Gaps = 46/456 (10%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R H   P V ++NIL   L      +  + +   +  AG  P+  T++ L+  FC+ G
Sbjct: 1   MVR-HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 59

Query: 157 RVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            +     V+  +       PN VTF S++ GLC   R+  A  +F +       PDV +Y
Sbjct: 60  ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119

Query: 216 NTLINGLCRTGHTIVALNLFEEMAN--------------------GNGEFGVVC------ 249
           NTL++G C+ G    +L +F EM                      GN E  V        
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 250 ---KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              + N VT+  +IDG CK+GF+D A     +M+   I P VV Y ++I G+C     + 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ L  EM  + V+PDVVT+S I+   CK G +D A +L + M+ +GV P+  TY++LI 
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C   +++ A +LF +M   G   D  +Y TLI+ +CK  +VE+ALSL+ EM+ KG+ P
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 359

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN---------------NFID 471
            VVTY+ L  GL +  + + A +L  ++       D   Y+                 + 
Sbjct: 360 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 419

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G C  G + EA ++++++ D  ++L+   Y+ LI G
Sbjct: 420 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 455



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 200/460 (43%), Gaps = 70/460 (15%)

Query: 75  KSSGQGDINLITPNE---ALC----------IFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           +  G    NL+T N     LC          +FD M+R     P V S+N L     K  
Sbjct: 72  REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVG 130

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                L++F  +   GL PD+ T + LI+  CK G +     ++ ++       N VTFT
Sbjct: 131 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 190

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +LI G C +  + +A     + R    +P V  YN LING C+ G   +A  L  EM   
Sbjct: 191 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 250

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   KP+ VTY+TII G CK G +D A +L  KM  + + PD +TY+S+IRG C  
Sbjct: 251 R------VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              N+A  LF  M+  GVQPD  T++ ++D  CK G ++KA  L + MI +GV P+  TY
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364

Query: 362 NTLIDG--------------------------------------------------YCLT 371
           + LI+G                                                  +C+ 
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             +  A K++ SM       D   Y+ LI+ +C+  +V +ALS + +ML  G  P   + 
Sbjct: 425 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 484

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            +L  GLFE   V  A     ++      AD       ID
Sbjct: 485 ISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 524


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 221/403 (54%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN +   L K++ +D    +F+ ++   + PD+ + +ILI  FC++G V      
Sbjct: 225 PGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKF 284

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +   TP+ V+F+ LI       ++  AAA   + +     PD   Y  +I G CR
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCR 344

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + +EM       G+ C P+ VTYNT+++GLCK+  +  A+EL  +MK+  +
Sbjct: 345 AGSMSEALRVRDEMV------GLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+T++I G+C   ++ +A +LF  ++ Q ++PDVV ++ ++D +C+ G + KA+ 
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  R + PN  TY+ LID +C   +++ A      M S G + ++++YN++I  YC
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ +V++      +M+   I P ++T+NTL  G  +   +  A  +F+ M +  V  D  
Sbjct: 519 RSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAV 578

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+G  + G + EA  +F+ +  S  E +  +Y  LI+G
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLING 621



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 205/381 (53%), Gaps = 6/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFNIL G   +    +  +  +K +   G+ PD+ + S LI  F   G++ H    
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ V +T +I G C    + EA  +  +     C PDV TYNTL+NGLC+
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A  L  EM     E GV   P+  T+ T+I G C++G  +KA +LF  +  + +
Sbjct: 380 QHRLLDAEELLNEMK----ERGVT--PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVV Y S+I G C   D  +A  L+ +M  + + P+ VT+S+++D  C+ G++++A  
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ M+ +G  PN  TYN++I GYC +  +   ++    M  +  + D++++NTLI+ Y 
Sbjct: 494 FLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +++  A ++++ M  + ++P  VTYN +  G  E   +E A ++F +M  + +  D Y
Sbjct: 554 KEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRY 613

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
           TY + I+G   +G   EA +L
Sbjct: 614 TYMSLINGHVTAGNSKEAFQL 634



 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 204/399 (51%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+     K+  +D   ++   +    +FPD+ TH++LI+   + G V     ++  +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 P  VTF S++KGLC   R  +A  +F      +  PDV ++N LI G CR G  
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+  ++EM     + GV   P+ V+++ +I      G +D A     +MK   + PD 
Sbjct: 279 EEAMKFYKEMQ----QRGVT--PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT VI GFC A   +EA R+  EM+  G  PDVVT++ +++ LCK  ++  A  LL  
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P+  T+ TLI GYC     + A +LF ++       DVV+YN+LI+  C+  D
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           + +A  L+ +M ++ I P  VTY+ L     E  QVE A    DEM       +  TYN+
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+SG V +  +  + +       +++++N LI G
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 176/339 (51%), Gaps = 6/339 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L S    NA T   ++   C      +A  + ++       PDV T+N LI+   R G 
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L + MAN         KP  VT+N+++ GLCK    DKAKE+F  M   ++ PD
Sbjct: 208 VDAAIALVDSMANKG------LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPD 261

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V ++  +I GFC   +  EA + + EM  +GV PDVV+FS ++      GKMD A+  L 
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+   Y  +I G+C    +  A ++   M   GC+ DVV+YNTL+N  CK  
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +A  L +EM  +G+ P + T+ TL  G       E+AL+LFD +    +  D   YN
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           + IDG+C+ G + +A EL+  +   +   N V+Y+ LID
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SF+ L G  +     D   +  + +   GL PD   ++++I  FC+ G +S    V
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ VT+ +L+ GLC + R+++A  L  + +     PD+ T+ TLI+G CR
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL LF+ + +         +P+ V YN++IDG+C++G + KA EL+  M    I
Sbjct: 415 DGNFEKALQLFDTLLHQR------LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY+ +I   C      EA     EM+ +G  P+++T++ I+   C++G + K  +
Sbjct: 469 FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ 528

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ M+   + P+  T+NTLI GY   + +  A  +F  ME      D V+YN +IN + 
Sbjct: 529 FLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFS 588

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +  ++EEA  ++ +M + GI+P   TY +L  G       + A +L DEM     A D
Sbjct: 589 EQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 160/300 (53%), Gaps = 6/300 (2%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           E + +T N +++  C++     A  +  EM            P+ VT+N +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A  L   M ++ + P +VT+ SV++G C    +++AK +F  M    V PDV +F++
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ G++++A +  + M  RGV P+  +++ LI  +    K+DHA      M+  G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D V Y  +I  +C+   + EAL +  EM+  G  P VVTYNTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L +EM+   V  D  T+   I G C+ G   +AL+LF  +   +   ++V+YN LIDG+
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 135/249 (54%), Gaps = 10/249 (4%)

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           + G+   A+E +  +   +   +  T   ++  +C + ++++A  +  EM  + V PDVV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T +V++D   + G +D A  L++ M  +G+ P   T+N+++ G C   + D A+++F +M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-Q 443
           +      DV S+N LI  +C+  +VEEA+  Y EM  +G+ P VV+++ L +GLF    +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL-IGLFSTRGK 312

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL----NIV 499
           ++ A     EM+   +  D   Y   I G C++G + EAL     +RD    L    ++V
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR----VRDEMVGLGCLPDVV 368

Query: 500 SYNCLIDGL 508
           +YN L++GL
Sbjct: 369 TYNTLLNGL 377



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 111/220 (50%)

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P    +  +IR +  +    EA   F  ++D  V       + ++  L + G    A   
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
             L++      N YT N ++  YC + + D A  +   ME      DVV++N LI+   +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             DV+ A++L   M +KG+KP +VT+N++  GL +  + ++A ++F  M +  VA D  +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +N  I G C+ G V EA++ ++ ++      ++VS++CLI
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 199/385 (51%), Gaps = 7/385 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+  F+ ML M P PPP   FN +   L KNK Y TV+SLFK+    G+ PD+ T SIL
Sbjct: 44  DAVASFNRMLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 102

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCFC +  ++  F V   IL+  + PNA+T  +LIKGLC    I  A     K      
Sbjct: 103 INCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGF 162

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D  +Y TLINGLC+ G T     L  ++       G   KP+ V Y TII  LCK   
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDLVMYTTIIHCLCKNKL 216

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A +L+ +M  + I+P+V TYT++I GFC   +  EA  L  EM  + + PDV TF++
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D L K GK+D+A  L E M  + + PN  TY +LIDG C    ++ A  L   M+  G
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +V SY  L++  CK   +E A   +  +L KG    V TYN +  GL +       +
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGL 473
            L  +M       +  T+   I  L
Sbjct: 397 DLKSKMEGKGCMPNAITFKTIICAL 421



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 169/334 (50%), Gaps = 6/334 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P    F +++  L    R     +LF +       PD+ T + LIN  C   H   A ++
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F  +            PN +T NT+I GLC  G + +A     K+  +    D V+Y ++
Sbjct: 119 FANILKRGYH------PNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTL 172

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C A +     RL  ++    V+PD+V ++ I+  LCKN  +  A  L   MI +G+
Sbjct: 173 INGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGI 232

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +PN +TY TLI G+C+   +  A  L   M+      DV ++N LI+   K   ++EA+S
Sbjct: 233 SPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMS 292

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ EM  K + P +VTY +L  GL + H +ERA+ L  +M+   +  + Y+Y   +D LC
Sbjct: 293 LFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALC 352

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G +  A + F+ +    Y LN+ +YN +I+GL
Sbjct: 353 KGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 386



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 142/282 (50%), Gaps = 6/282 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K      V  L ++L    + PD+  ++ +I+C CK   +     +   +
Sbjct: 168 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEM 227

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +PN  T+T+LI G C    + EA +L  + ++    PDV+T+N LI+ L + G  
Sbjct: 228 IVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKI 287

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A++LFEEM + N        PN VTY ++IDGLCK   +++A  L  KMK++ I P+V
Sbjct: 288 DEAMSLFEEMKHKN------MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNV 341

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            +YT ++   C       AK+ F  ++ +G   +V T++V+++ LCK G       L   
Sbjct: 342 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 401

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           M  +G  PN  T+ T+I      D+ D A K    M + G +
Sbjct: 402 MEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 222/406 (54%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLS--LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           P V S+N +   + +++    + +  +++ +  + + P++YT++ILI  FC +G +  G 
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
              G + R+   PN VT+ +LI   C   RI EA  L         +P++ +YN +INGL
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A  + EEM    G  G    P+ VTYNT+++G CKEG   +A  +  +M   
Sbjct: 295 CREGSMKEAWEILEEM----GYKGFT--PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRN 348

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            ++P VVTYT++I   C A + N A   F +M  +G++P+  T++ ++D   + G +++A
Sbjct: 349 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA 408

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R+L  M   G +P+  TYN  I G+C+ ++++ A  +   M   G   DVVSY+T+I+ 
Sbjct: 409 YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISG 468

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C+  +++ A  +  EM+ KG+ P  VTY++L  GL E+ ++  A  L  EM    +  D
Sbjct: 469 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPD 528

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +TY   I+  C  G + +AL L   +    +  + V+Y+ LI+GL
Sbjct: 529 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 211/418 (50%), Gaps = 21/418 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    D    L K ++S G+ P++ +++++IN  C+ G +   + +
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +    FTP+ VT+ +L+ G C E    +A  +  +       P V TY  LIN +C+
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A+  F++M           +PN  TY T+IDG  ++G +++A  +  +M +   
Sbjct: 367 ARNLNRAMEFFDQMRIRG------LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P VVTY + I G C      EA  +  EM+++G+ PDVV++S I+   C+ G++D+A +
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+ +GV+P+  TY++LI G C   ++  A  L   M   G   D  +Y TLIN YC
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 540

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL-----FDEMRRNHV 459
              D+ +AL L+ EM+ KG  P  VTY+ L  GL +  +   A +L     ++E   + V
Sbjct: 541 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 600

Query: 460 AADTYTYN----------NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             DT   N            I G C  G + EA  +F ++ +  ++     YN +I G
Sbjct: 601 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 658



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 243/505 (48%), Gaps = 40/505 (7%)

Query: 30  HTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNE 89
           H    +S  +    SY    S+  ++L L     A    F    CK      +      +
Sbjct: 47  HLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFDSHCKCLSLHILTRFKLYK 106

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH--------YDTVLSLFKRLN------- 134
                   L +  S P  SS   +F CL  + H        +D ++  +  LN       
Sbjct: 107 TAQTLAQELALSASDPSGSS---IFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVN 163

Query: 135 ------SAGLFPDIYTHSILINCFCKMGRVSHGFVVLG------RILRSCFTPNAVTFTS 182
                 S+G  P + +++ +++   +    S G V L        ++RS  +PN  T+  
Sbjct: 164 TINLAKSSGFMPGVLSYNSVLDAIVR----SRGSVKLSAEEVYREMIRSRVSPNVYTYNI 219

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           LI+G C+   + +    F +     C P+V TYNTLI+  C+ G    A  L + M++  
Sbjct: 220 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 279

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                  +PN ++YN II+GLC+EG + +A E+  +M  +   PD VTY +++ G+C   
Sbjct: 280 ------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 333

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           ++++A  +  EM+  GV P VVT++ +++ +CK   +++A    + M  RG+ PN  TY 
Sbjct: 334 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 393

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           TLIDG+     ++ A ++   M  +G    VV+YN  I+ +C  + +EEAL +  EM+ K
Sbjct: 394 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 453

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G+ P VV+Y+T+  G     +++RA ++  EM    V+ D  TY++ I GLC+   + EA
Sbjct: 454 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
            +L + + D     +  +Y  LI+ 
Sbjct: 514 CDLSQEMLDMGLPPDEFTYTTLINA 538



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 192/368 (52%), Gaps = 22/368 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL I   M+R   SP  V ++  L   + K ++ +  +  F ++   GL P+  T++ 
Sbjct: 336 HQALVIHAEMVRNGVSPS-VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F + G ++  + +L  +  S F+P+ VT+ + I G C   R+ EA  +  +     
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+T+I+G CR G    A  + +EM     E GV   P+ VTY+++I GLC+  
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMV----EKGV--SPDAVTYSSLIQGLCEMR 508

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A +L  +M D  + PD  TYT++I  +C   D N+A  L  EM+ +G  PD VT+S
Sbjct: 509 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 568

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTD 372
           V+++ L K  +  +A RLL  +I+    P+  TY+TLI+               G+C+  
Sbjct: 569 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKG 628

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A ++F SM           YN +I+ +C+  ++ +A +LY EM+  G  P  VT  
Sbjct: 629 LMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVI 688

Query: 433 TLFLGLFE 440
           TL   LF+
Sbjct: 689 TLIKALFK 696



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 198/440 (45%), Gaps = 48/440 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N++   L +         + + +   G  PD  T++ L+N +CK G      V+
Sbjct: 282 PNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVI 341

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R+  +P+ VT+T+LI  +C    +  A   F + R+    P+  TY TLI+G  R
Sbjct: 342 HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR 401

Query: 225 TGHTIVALNLFEEMANGN----------------------GEFGVVCK-------PNTVT 255
            G    A  +  EM                             GVV +       P+ V+
Sbjct: 402 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+TII G C++G +D+A ++  +M ++ ++PD VTY+S+I+G C      EA  L  EM+
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 521

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D G+ PD  T++ +++  C  G ++KA  L + MI +G  P+  TY+ LI+G     +  
Sbjct: 522 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 581

Query: 376 HARKLFVSMESNGCMHDVVSYNTLIN---------------WYCKNKDVEEALSLYSEML 420
            A++L   +     +   V+Y+TLI                 +C    + EA  ++  M+
Sbjct: 582 EAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMV 641

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            +  KP    YN +  G      + +A  L+ EM  +     T T    I  L K G   
Sbjct: 642 ERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNE 701

Query: 481 EALEL----FRAIRDSKYEL 496
           E  E+     R+ R ++ EL
Sbjct: 702 EMSEVIGDTLRSCRLNEAEL 721



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 171/356 (48%), Gaps = 26/356 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA  I + M     SP  V+    + G C+ +    +  L + + +   GL PD+ ++S
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE--RMEEALGVVQEMVEKGLAPDVVSYS 463

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I+ FC+ G +   F +   ++    +P+AVT++SLI+GLC   R+ EA  L  +    
Sbjct: 464 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD FTY TLIN  C  G    AL+L +EM +     G +  P+ VTY+ +I+GL K+
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK----GFL--PDAVTYSVLINGLNKQ 577

Query: 267 GFVDKAKELFLKMKDENINPDVVTY---------------TSVIRGFCYANDWNEAKRLF 311
               +AK L  K+  E   P  VTY                ++I+GFC     +EA R+F
Sbjct: 578 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 637

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M+++  +P    ++VI+   C+ G + KA  L + MI  G  P+T T  TLI      
Sbjct: 638 ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKA-LFK 696

Query: 372 DKIDHARKLFVSMESNGC-MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           + ++      +      C +++      L+    K  ++E  L++ ++M   G+ P
Sbjct: 697 EGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLP 752


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 230/452 (50%), Gaps = 39/452 (8%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D MLR     P V ++ +L   + +N  ++  +++   + + G  P+I T++++
Sbjct: 161 DALSLLDDMLR-RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 219

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C+ GRV     +L R+    F P+ V++T+L+KGLCA  R  +   LF +     C
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 279

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T++ LI   CR G    A+ + E+M     E G  C  NT   N +I+ +CK+G 
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMT----EHG--CATNTTLCNIVINSICKQGR 333

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A +L   M     NPD ++YT+V++G C A  W++AK L  EM+     P+ VTF+ 
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393

Query: 329 IMDELCKNGKMDKASRLLELMIWRG--------------------------------VNP 356
            +  LC+ G +++A  L+E M   G                                  P
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 453

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           NT TY TL+ G C  +++D A +L   M    C  +VV++N L++++C+   +EEA+ L 
Sbjct: 454 NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELV 513

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M+  G  P ++TYNTL  G+ +    E AL+L   +    V+ D  T+++ I  L K 
Sbjct: 514 EQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 573

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             + EA++LF  ++D       V YN ++ GL
Sbjct: 574 DRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605



 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 207/393 (52%), Gaps = 14/393 (3%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +         + +    +G   D++ ++ L+  +C+ G +     ++G +      P+
Sbjct: 86  LCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPD 142

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
           A T+T LI+ LC   R+ +A +L        C+P+V TY  L+  +CR      A+ + +
Sbjct: 143 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD 202

Query: 237 EM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           EM A G       C PN VTYN II+G+C+EG VD A+EL  ++      PD V+YT+++
Sbjct: 203 EMRAKG-------CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL 255

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           +G C +  W++ + LF EMM++   P+ VTF +++   C+ G +++A ++LE M   G  
Sbjct: 256 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCA 315

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            NT   N +I+  C   ++D A KL   M S GC  D +SY T++   C+ +  ++A  L
Sbjct: 316 TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKEL 375

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            +EM+     P  VT+NT    L +   +E+A+ L ++M  +       TYN  ++G C 
Sbjct: 376 LNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCV 435

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G +  ALELFR++     + N ++Y  L+ GL
Sbjct: 436 QGHIDSALELFRSM---PCKPNTITYTTLLTGL 465



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 215/441 (48%), Gaps = 47/441 (10%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP  V ++N L     +  H D    L   + S  + PD YT++ LI   C  GRV+   
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADAL 163

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  +LR    PN VT+T L++ +C  S   +A A+  + R   C P++ TYN +ING+
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 223

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A  L   + +    +G   +P+TV+Y T++ GLC     D  +ELF +M ++
Sbjct: 224 CREGRVDDARELLNRLPS----YGF--QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 277

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N  P+ VT+  +IR FC       A ++  +M + G   +    +++++ +CK G++D A
Sbjct: 278 NCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDA 337

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN--------------- 387
            +LL  M   G NP+T +Y T++ G C  ++ D A++L   M  N               
Sbjct: 338 FKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICI 397

Query: 388 --------------------GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                               GC   VV+YN L+N +C    ++ AL L+  M     KP 
Sbjct: 398 LCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPN 454

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            +TY TL  GL    +++ A +L  EM R     +  T+N  +   C+ GF+ EA+EL  
Sbjct: 455 TITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVE 514

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +     N+++YN L+DG+
Sbjct: 515 QMMEHGCTPNLITYNTLLDGI 535



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 211/428 (49%), Gaps = 18/428 (4%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C S    D+  +        F  M+  +  P  V+ F++L     +  
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEEL--------FAEMMEKNCMPNEVT-FDMLIRFFCRGG 297

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             +  + + +++   G   +    +I+IN  CK GRV   F +L  +      P+ +++T
Sbjct: 298 MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYT 357

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC   R  +A  L  +     C P+  T+NT I  LC+ G    A+ L E+M+  
Sbjct: 358 TVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMS-- 415

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             E G  C    VTYN +++G C +G +D A ELF  M      P+ +TYT+++ G C A
Sbjct: 416 --EHG--CTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNA 468

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              + A  L  EM+     P+VVTF+V++   C+ G +++A  L+E M+  G  PN  TY
Sbjct: 469 ERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITY 528

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           NTL+DG       + A +L   + S G   DV++++++I    K   +EEA+ L+  +  
Sbjct: 529 NTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQD 588

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G++P  V YN + LGL +  +++ A+  F  M  N    +  TY   I+GL   G + E
Sbjct: 589 IGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKE 648

Query: 482 ALELFRAI 489
           A +L   +
Sbjct: 649 AQDLLSVL 656



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 157/349 (44%), Gaps = 44/349 (12%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI+   + K    D    L   + S G  PD  +++ ++   C+  R      +L  ++R
Sbjct: 322 NIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVR 381

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
           +   PN VTF + I  LC +  I +A  L  +     C   V TYN L+NG C  GH   
Sbjct: 382 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDS 441

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF  M          CKPNT+TY T++ GLC    +D A EL  +M   +  P+VVT
Sbjct: 442 ALELFRSMP---------CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMD---------------------------------- 316
           +  ++  FC      EA  L  +MM+                                  
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552

Query: 317 -QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +GV PDV+TFS I+  L K  ++++A +L  ++   G+ P    YN ++ G C   +ID
Sbjct: 553 SKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEID 612

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +A   F  M SNGCM +  +Y  LI        ++EA  L S + S+G+
Sbjct: 613 NAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 145/289 (50%), Gaps = 11/289 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +FN     L +    +  + L ++++  G    + T++ L+N FC  G +     
Sbjct: 385 PPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL- 443

Query: 164 VLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
               + RS    PN +T+T+L+ GLC   R+  AA L  +     C P+V T+N L++  
Sbjct: 444 ---ELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFF 500

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    A+ L E+M     E G  C PN +TYNT++DG+ K+   + A EL   +  +
Sbjct: 501 CQKGFLEEAIELVEQMM----EHG--CTPNLITYNTLLDGITKDCSSEDALELLHGLVSK 554

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            ++PDV+T++S+I      +   EA +LF  + D G++P  V ++ I+  LCK  ++D A
Sbjct: 555 GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNA 614

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
                 M+  G  PN  TY  LI+G      +  A+ L   + S G ++
Sbjct: 615 IDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLN 663



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  PDV   + ++  LC+ G+   A+R+L      G   + + YNTL+ GYC    +D A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           R+L  SM       D  +Y  LI   C    V +ALSL  +ML +G +P VVTY  L   
Sbjct: 131 RRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           +      E+A+ + DEMR      +  TYN  I+G+C+ G V +A EL   +    ++ +
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 498 IVSYNCLIDGL 508
            VSY  L+ GL
Sbjct: 248 TVSYTTLLKGL 258


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 231/425 (54%), Gaps = 13/425 (3%)

Query: 91  LCIFDYML------RMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           LC+ D  L      + H   P V S+N +L   +   ++     ++FK +  + + P+++
Sbjct: 147 LCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVF 206

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T++ILI  FC  G +        R+ +    PN VT+ +LI G C   +I +   L    
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            +   EP++ +YN +INGLCR G       +  EM N  G        + VTYNT+I G 
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEM-NKRGY-----SLDEVTYNTLIKGY 320

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CKEG   +A  +  +M    ++P V+TYTS+I   C A + N A     +M  +G+ P+ 
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNE 380

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++D   + G M++A R+L+ MI  G +P+  TYN LI+G+C+  K+  A  +   
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLED 440

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  G   DVVSY+T+++ +C++ DV+EAL +  +M++KGIKP  +TY++L  G  E  +
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            + A  LFDEM R  +  D +TY   I+  C  G + +A++L   + +     ++V+Y+ 
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560

Query: 504 LIDGL 508
           LI+GL
Sbjct: 561 LINGL 565



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 219/416 (52%), Gaps = 11/416 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           +F  ML+   SP  V ++NIL    CLA N   D  L  F R+   G  P++ T++ LI+
Sbjct: 192 VFKEMLQSQVSPN-VFTYNILIRGFCLAGN--LDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +CK+ ++  GF +L  +      PN +++  +I GLC E R+ E + + T+        
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  TYNTLI G C+ G+   AL +  EM            P+ +TY ++I  +CK G ++
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG------LSPSVITYTSLIHSMCKAGNMN 362

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A E   +M+   + P+  TYT+++ GF      NEA R+  EM+D G  P VVT++ ++
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           +  C  GKM  A  +LE M  +G+ P+  +Y+T++ G+C +  +D A ++   M + G  
Sbjct: 423 NGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIK 482

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D ++Y++LI  +C+ +  +EA  L+ EML  G+ P   TY  L         +++A++L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQL 542

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +EM    V  D  TY+  I+GL K     EA  L   +   +   + V+Y+ LI+
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 191/359 (53%), Gaps = 24/359 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +   MLR H   P V ++  L   + K  + +       ++   GL P+  T++ 
Sbjct: 327 HQALVMHAEMLR-HGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F + G ++  + VL  ++ + F+P+ VT+ +LI G C   ++++A A+    +   
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             PDV +Y+T+++G CR+     AL +  +M A G        KP+T+TY+++I G C++
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG-------IKPDTITYSSLIQGFCEQ 498

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
               +A +LF +M    + PD  TYT++I  +C   D  +A +L  EM+++GV PDVVT+
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTY 558

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLT 371
           SV+++ L K  +  +A RLL  + +    P+  TY+TLI+               G+C+ 
Sbjct: 559 SVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +  A ++F SM       D  +YN +I+ +C+  D+ +A SLY EM+  G     VT
Sbjct: 619 GMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVT 677



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 192/427 (44%), Gaps = 56/427 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N++   L +      +  +   +N  G   D  T++ LI  +CK G      V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR   +P+ +T+TSLI  +C    +  A     + RV    P+  TY TL++G  +
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  + +EM + NG       P+ VTYN +I+G C  G +  A  +   MK++ +
Sbjct: 393 KGYMNEAYRVLKEMID-NG-----FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL 446

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVV+Y++V+ GFC + D +EA R+  +M+ +G++PD +T+S ++   C+  +  +A  
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW-- 402
           L + M+  G+ P+ +TY  LI+ YC+   +  A +L   M   G + DVV+Y+ LIN   
Sbjct: 507 LFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 403 ------------------------------------------------YCKNKDVEEALS 414
                                                           +C    + EA  
Sbjct: 567 KQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++  ML K  KP    YN +  G      + +A  L+ EM ++     T T    +  L 
Sbjct: 627 VFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLH 686

Query: 475 KSGFVLE 481
           K G V E
Sbjct: 687 KEGKVNE 693



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 164/354 (46%), Gaps = 22/354 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +   M+    SP  V+   ++ G     K  D + ++ + +   GL PD+ ++S 
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI-AVLEDMKEKGLTPDVVSYST 455

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++ FC+   V     V  +++     P+ +T++SLI+G C + R  EA  LF +     
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD FTY  LIN  C  G    A+ L  EM     E GV+  P+ VTY+ +I+GL K+ 
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMV----EKGVL--PDVVTYSVLINGLNKQA 569

Query: 268 FVDKAKELFLKMKDENINPDVVTY---------------TSVIRGFCYANDWNEAKRLFI 312
              +AK L LK+  E   P  VTY                S+I+GFC      EA ++F 
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M+++  +PD   ++V++   C+ G + KA  L + M+  G   +T T   L+       
Sbjct: 630 SMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEG 689

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           K++    +  ++  +  + +      L+    +  +++  L + +EM   G  P
Sbjct: 690 KVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 22/285 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +   M+     P  ++  +++ G   + +       LF  +   GL PD +T++ 
Sbjct: 467 DEALRVKRKMVAKGIKPDTITYSSLIQG-FCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +C  G +     +   ++     P+ VT++ LI GL  ++R  EA  L  K     
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEE 585

Query: 208 CEPDVFTYNTLIN---------------GLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
             P   TY+TLI                G C  G    A  +FE M   N       KP+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNH------KPD 639

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
              YN +I G C+ G + KA  L+ +M         VT  ++++        NE   +  
Sbjct: 640 GTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            ++      +     V+++   + G MD    +L  M   G  PN
Sbjct: 700 NVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 207/385 (53%), Gaps = 41/385 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+  F  + G L K KHY T +SL +++   G+ P++ T +ILINCFC +G+++  F V
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG+IL+  + P+ +T  +L+KGLC +  +  +     K      + +  +Y TL+NGLC+
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A+ L   + + +       +P+ V Y+TIIDGLCK+  V++A + F +M    I
Sbjct: 183 IGETRCAVKLLRMIEDRS------TRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGI 236

Query: 285 NPDVVTYTSVIRGFCYANDW-----------------------------------NEAKR 309
            P+V+TY+++I GFC A                                       EAK+
Sbjct: 237 FPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKK 296

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM  +G   DVVT++ ++D LCK+  +DKA+ L   M   G+ PN YTY  LIDG C
Sbjct: 297 LLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLC 356

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++ +A+KLF  +   GC  DV +YN +I+  CK    ++AL++ S+M   G  P  V
Sbjct: 357 KGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAV 416

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM 454
           T++ +   LFE  + ++A KL   M
Sbjct: 417 TFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 6/320 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N L   L         L    ++ + G   +  ++  L+N  CK+G       +
Sbjct: 133 PDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKL 192

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      P+ V ++++I GLC +  + +A   F++       P+V TY+TLI G C 
Sbjct: 193 LRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCL 252

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A +L  EM   N        PN  TYN +ID LCKEG V +AK+L  +M  +  
Sbjct: 253 AGQLMGAFSLLNEMILKN------INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQ 306

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DVVTY SV+ G C + + ++A  LF++M   G+QP+  T++ ++D LCK G++  A +
Sbjct: 307 PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQK 366

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + ++ +G   +  TYN +I G C     D A  +   ME NGC+ + V+++ +I    
Sbjct: 367 LFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLF 426

Query: 405 KNKDVEEALSLYSEMLSKGI 424
           +  + ++A  L   M++KG+
Sbjct: 427 EKDENDKAEKLLHGMIAKGL 446



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 141/282 (50%), Gaps = 6/282 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K       + L + +      PD+  +S +I+  CK   V+  +     +
Sbjct: 172 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM 231

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +T+++LI G C   ++M A +L  +  +    P+V+TYN LI+ LC+ G  
Sbjct: 232 NARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKV 291

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  L  EM +  G+       + VTYN+++DGLCK   +DKA  LF+KMK   I P+ 
Sbjct: 292 KEAKKLLAEMHH-KGQ-----PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNK 345

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT++I G C       A++LF  ++ +G   DV T++V++  LCK G  DKA  +   
Sbjct: 346 YTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSK 405

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           M   G  PN  T++ +I      D+ D A KL   M + G +
Sbjct: 406 MEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 222/435 (51%), Gaps = 52/435 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F+ +L+ +P+PP +  FN + G L K+KHY TVL L +++   G+ P++   +I
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI----------MEAA 197
           LIN FC++G +   F VL +IL+  + PN +T  +LIKGLC   +I           +A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            LF K  +    PDV+T+  L++G C+ G    A N+   M           KP  VTYN
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG------IKPGVVTYN 216

Query: 258 TIID-----------------------------------GLCKEGFVDKAKELFLKMKDE 282
           +++D                                   G CK   +D+A EL  +M  +
Sbjct: 217 SLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK 276

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I P+VVTY+S+I G C +   + A +L  EM D+G  P++VT+S I+D LCKN ++D A
Sbjct: 277 QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNA 336

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             LL  M  +G+ PN YTY  LI G C + K++ ARK+F  +   G   +V +Y  +I  
Sbjct: 337 IALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQG 396

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C     +EAL+L S+M   G  P   TY  + L LF+  + E A KL  EM   +    
Sbjct: 397 FCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGR 456

Query: 463 TYTYNNFIDGLCKSG 477
               N+ I  +  +G
Sbjct: 457 VALTNDLIASIWVTG 471



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 187/360 (51%), Gaps = 16/360 (4%)

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     +  R+L+   TP  + F  ++  L           L  K      +P++   N 
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV-DK----- 271
           LIN  C+ GH   A ++  ++        +  KPNT+T NT+I GLC  G + DK     
Sbjct: 103 LINSFCQLGHIPSAFSVLTKI------LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVG 156

Query: 272 ----AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A +LF KM  ENINPDV T+T ++ GFC      EAK +   MM QG++P VVT++
Sbjct: 157 KLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYN 216

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD      +++KA  +   M   GV+P+  +Y+ LI+G+C    +D A +L   M   
Sbjct: 217 SLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK 276

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             + +VV+Y++LI+  CK+  +  AL L  EM  +G  P +VTY+++   L + HQV+ A
Sbjct: 277 QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNA 336

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + L  +M+   +  + YTY   I GLC+SG + +A ++F  +    + LN+ +Y  +I G
Sbjct: 337 IALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQG 396



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%)

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           N DV++A+SL++ +L +   P  + +N +   L +       L L  +M    +  +   
Sbjct: 40  NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            N  I+  C+ G +  A  +   I    Y+ N ++ N LI GL
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGL 142


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 204/370 (55%), Gaps = 8/370 (2%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ +I+ FCK+ ++     VL R+    F P+ VT+  +I  LC   ++  A  +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNT 258
             +  +  C P V TY  LI      G    A+ L EEM A G         P+  TYN 
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------LLPDMYTYNA 257

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           II G+CKEG V++A EL   +  +   PDV++Y  ++R F     W+E ++L  EM  +G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +P+ VT+S+++  LC+ G++D+A  +L++MI + + P+TY+Y+ LI   C   ++D A 
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +   M SNGC+ D+V+YNT++   CKN +  +AL +++++   G  P V +YNT+   L
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           +      RAL +   M    +  D  TYN+ I  LC+ G V EA+ L   +  S +   +
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 497

Query: 499 VSYNCLIDGL 508
           +SYN ++ GL
Sbjct: 498 ISYNIVLLGL 507



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 192/385 (49%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NI+ G L   +     L++  +L      P + T++ILI      G ++    +
Sbjct: 180 PDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKL 239

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+  T+ ++I+G+C E  +  AA L T      CEPDV +YN L+     
Sbjct: 240 LEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLN 299

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G       L  EM      F   C+PN VTY+ +I  LC+ G +D+A  +   M ++ +
Sbjct: 300 QGKWDEGEKLVAEM------FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 353

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y  +I   C     + A  +   M+  G  PD+V ++ I+  LCKNG  ++A  
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   +   G  PN  +YNT+I           A  +  +M S G   D ++YN+LI+  C
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++  VEEA+ L  +M   G +PTV++YN + LGL ++ +++ A+ +F EM       +  
Sbjct: 474 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 533

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           TY   I+G+  +G+  EA+EL  ++
Sbjct: 534 TYILLIEGIGFAGWRTEAMELANSL 558



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 167/367 (45%), Gaps = 54/367 (14%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG------LCAESRIMEAAALFT 201
           L+N  CK G+ +     L  ++   +TP+ +  T LIKG      +   SR+ME   +  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME---ILE 140

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
            H     EPDVF                                          YN +I 
Sbjct: 141 SHT----EPDVFA-----------------------------------------YNAVIS 155

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G CK   ++ A ++  +MK     PD+VTY  +I   C       A  +  +++     P
Sbjct: 156 GFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMP 215

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
            V+T++++++     G +++A +LLE M+ RG+ P+ YTYN +I G C    ++ A +L 
Sbjct: 216 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 275

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            S+ S GC  DV+SYN L+  +      +E   L +EM S+G +P  VTY+ L   L   
Sbjct: 276 TSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 335

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ A+ +   M    +  DTY+Y+  I  LCK G +  A+ +   +  +    +IV+Y
Sbjct: 336 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 395

Query: 502 NCLIDGL 508
           N ++  L
Sbjct: 396 NTILAAL 402



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NIL         +D    L   + S G  P+  T+SILI+  C+ GR+     V
Sbjct: 285 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 344

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++    TP+  ++  LI  LC E R+  A  +        C PD+  YNT++  LC+
Sbjct: 345 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 404

Query: 225 TGHTIVALNLFEEM----------------------ANGNGEFGVV-------CKPNTVT 255
            G+   AL +F ++                       + +   G+V         P+ +T
Sbjct: 405 NGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEIT 464

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I  LC++G V++A  L   M+     P V++Y  V+ G C     ++A  +F EM+
Sbjct: 465 YNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMI 524

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           ++G +P+  T+ ++++ +   G   +A  L   +  R V
Sbjct: 525 EKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 563



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL IF+  LR    PP VSS+N +   L         L +   + S G+ PD  T++ 
Sbjct: 409 NQALEIFNK-LRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNS 467

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+C C+ G V     +L  + +S F P  +++  ++ GLC   RI +A  +F +     
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNL 234
           C P+  TY  LI G+   G    A+ L
Sbjct: 528 CRPNETTYILLIEGIGFAGWRTEAMEL 554


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 223/418 (53%), Gaps = 10/418 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL + D ML      P V ++ +L   + K+  +   + +   + + G  P+I T+++
Sbjct: 193 GEALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 251

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  C+ GRV      L R+    F P+ V++T+++KGLCA  R  +   LF +     
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  T++ L+   CR G    A+ + E+M+ G+G     C  NT   N +I+ +CK+G
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQG 365

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A +    M     +PD ++YT+V++G C A  W +AK L  EM+ +   P+ VTF+
Sbjct: 366 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +  LC+ G +++A+ L+E M   G   N  TYN L++G+C+  ++D A +LF SM   
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 483

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  + ++Y TL+   C  + ++ A  L +EML K   P VVT+N L     +   ++ A
Sbjct: 484 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           ++L ++M  +    +  TYN  +DG+ K     EALEL   +  +    +IV+Y+ +I
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 204/413 (49%), Gaps = 43/413 (10%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS----------------C 172
           L  R  S G  PD+Y  + LI   C+ GR S    VL    RS                C
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 173 ----------------FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
                             P+A T+T +I+GLC   R+ EA +L        C+P V TY 
Sbjct: 156 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 215

Query: 217 TLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            L+  +C++     A+ + +EM A G       C PN VTYN II+G+C+EG VD A+E 
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKG-------CTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             ++      PD V+YT+V++G C A  W + + LF EMM++   P+ VTF +++   C+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G +++A ++LE M   G   NT   N +I+  C   ++D A +   +M S GC  D +S
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y T++   C+ +  E+A  L  EM+ K   P  VT+NT    L +   +E+A  L ++M 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +    +  TYN  ++G C  G V  ALELF ++     + N ++Y  L+ GL
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGL 498



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 204/397 (51%), Gaps = 10/397 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M+  +  P  V+ F++L     +    +  + + ++++  G   +    +I+IN  
Sbjct: 303 LFAEMMEKNCMPNEVT-FDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 361

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GRV   F  L  +     +P+ +++T+++KGLC   R  +A  L  +     C P+ 
Sbjct: 362 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 421

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NT I  LC+ G    A  L E+M+    E G  C+ N VTYN +++G C +G VD A
Sbjct: 422 VTFNTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIVTYNALVNGFCVQGRVDSA 475

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ELF  M      P+ +TYT+++ G C A   + A  L  EM+ +   P+VVTF+V++  
Sbjct: 476 LELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 532

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+ G MD+A  L+E M+  G  PN  TYNTL+DG       + A +L   + SNG   D
Sbjct: 533 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 592

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+Y+++I    +   VEEA+ ++  +   G++P  V YN + L L +    + A+  F 
Sbjct: 593 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 652

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            M  N    +  TY   I+GL    F+ E  +L R +
Sbjct: 653 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 9/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+  +   L   K ++ V  LF  +      P+  T  +L+  FC+ G V     V
Sbjct: 279 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++       N      +I  +C + R+ +A         + C PD  +Y T++ GLCR
Sbjct: 339 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 398

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L +EM   N      C PN VT+NT I  LC++G +++A  L  +M +   
Sbjct: 399 AERWEDAKELLKEMVRKN------CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VTY +++ GFC     + A  LF  M     +P+ +T++ ++  LC   ++D A+ 
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAE 509

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+ +   PN  T+N L+  +C    +D A +L   M  +GC  ++++YNTL++   
Sbjct: 510 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 569

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ + EEAL L   ++S G+ P +VTY+++   L    +VE A+K+F  ++   +     
Sbjct: 570 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 629

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  +  LCK      A++ F  +  +    N ++Y  LI+GL
Sbjct: 630 IYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 44/349 (12%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI+   + K    D        + S G  PD  +++ ++   C+  R      +L  ++R
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN VTF + I  LC +  I +A  L  +     CE ++ TYN L+NG C  G    
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 474

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF  M          CKPNT+TY T++ GLC    +D A EL  +M  ++  P+VVT
Sbjct: 475 ALELFYSMP---------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 525

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQG-------------------------------- 318
           +  ++  FC     +EA  L  +MM+ G                                
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585

Query: 319 ---VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              V PD+VT+S I+  L +  ++++A ++  ++   G+ P    YN ++   C     D
Sbjct: 586 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 645

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
            A   F  M SNGCM + ++Y TLI        ++E   L  E+ S+G+
Sbjct: 646 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 149/302 (49%), Gaps = 13/302 (4%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +FN     L +    +    L ++++  G   +I T++ L+N FC  GRV     
Sbjct: 418 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 477

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +   C  PN +T+T+L+ GLC   R+  AA L  +     C P+V T+N L++  C
Sbjct: 478 LFYSM--PC-KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 534

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+ L E+M     E G  C PN +TYNT++DG+ K+   ++A EL   +    
Sbjct: 535 QKGLMDEAIELVEQMM----EHG--CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++PD+VTY+S+I      +   EA ++F  + D G++P  V ++ I+  LCK    D A 
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
                M+  G  PN  TY TLI+G    D +   R L   +    C   V++ N L  W 
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL----CSRGVLNKNLLEEWR 704

Query: 404 CK 405
            K
Sbjct: 705 PK 706



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 3/202 (1%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A RL      +G  PDV   + ++  LC+ G+   A+R+L      G   + + YNTL+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GYC   ++D AR+L  SM       D  +Y  +I   C    V EALSL  +ML +G +P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +VVTY  L   + +     +A+++ DEMR      +  TYN  I+G+C+ G V +A E  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +    ++ + VSY  ++ GL
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGL 291



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + + M+  H   P + ++N L   + K+ + +  L L   L S G+ PDI T+S 
Sbjct: 540 DEAIELVEQMME-HGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I    +  RV     +   +      P AV +  ++  LC       A   F       
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658

Query: 208 CEPDVFTYNTLINGL 222
           C P+  TY TLI GL
Sbjct: 659 CMPNELTYITLIEGL 673


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 223/417 (53%), Gaps = 10/417 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL + D ML      P V ++ +L   + K+  +   + +   + + G  P+I T++++
Sbjct: 163 EALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C+ GRV      L R+    F P+ V++T+++KGLCA  R  +   LF +     C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T++ L+   CR G    A+ + E+M+ G+G     C  NT   N +I+ +CK+G 
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGR 335

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A +    M     +PD ++YT+V++G C A  W +AK L  EM+ +   P+ VTF+ 
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +  LC+ G +++A+ L+E M   G   N  TYN L++G+C+  ++D A +LF SM    
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 452

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  + ++Y TL+   C  + ++ A  L +EML K   P VVT+N L     +   ++ A+
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +L ++M  +    +  TYN  +DG+ K     EALEL   +  +    +IV+Y+ +I
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 213/444 (47%), Gaps = 46/444 (10%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLS---LFKRLNSAGLFPDIYTHSILINCFCKMGR 157
            P  P  SS N     L +    D +     L  R  S G  PD+Y  + LI   C+ GR
Sbjct: 34  RPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGR 93

Query: 158 VSHGFVVLGRILRS----------------C----------------FTPNAVTFTSLIK 185
            S    VL    RS                C                  P+A T+T +I+
Sbjct: 94  TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIR 153

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGE 244
           GLC   R+ EA +L        C+P V TY  L+  +C++     A+ + +EM A G   
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG--- 210

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C PN VTYN II+G+C+EG VD A+E   ++      PD V+YT+V++G C A  W
Sbjct: 211 ----CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            + + LF EMM++   P+ VTF +++   C+ G +++A ++LE M   G   NT   N +
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+  C   ++D A +   +M S GC  D +SY T++   C+ +  E+A  L  EM+ K  
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P  VT+NT    L +   +E+A  L ++M  +    +  TYN  ++G C  G V  ALE
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF ++     + N ++Y  L+ GL
Sbjct: 447 LFYSM---PCKPNTITYTTLLTGL 467



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 204/397 (51%), Gaps = 10/397 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M+  +  P  V+ F++L     +    +  + + ++++  G   +    +I+IN  
Sbjct: 272 LFAEMMEKNCMPNEVT-FDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GRV   F  L  +     +P+ +++T+++KGLC   R  +A  L  +     C P+ 
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NT I  LC+ G    A  L E+M+    E G  C+ N VTYN +++G C +G VD A
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIVTYNALVNGFCVQGRVDSA 444

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ELF  M      P+ +TYT+++ G C A   + A  L  EM+ +   P+VVTF+V++  
Sbjct: 445 LELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+ G MD+A  L+E M+  G  PN  TYNTL+DG       + A +L   + SNG   D
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 561

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+Y+++I    +   VEEA+ ++  +   G++P  V YN + L L +    + A+  F 
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            M  N    +  TY   I+GL    F+ E  +L R +
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 9/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+  +   L   K ++ V  LF  +      P+  T  +L+  FC+ G V     V
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++       N      +I  +C + R+ +A         + C PD  +Y T++ GLCR
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L +EM   N      C PN VT+NT I  LC++G +++A  L  +M +   
Sbjct: 368 AERWEDAKELLKEMVRKN------CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VTY +++ GFC     + A  LF  M     +P+ +T++ ++  LC   ++D A+ 
Sbjct: 422 EVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAE 478

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+ +   PN  T+N L+  +C    +D A +L   M  +GC  ++++YNTL++   
Sbjct: 479 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ + EEAL L   ++S G+ P +VTY+++   L    +VE A+K+F  ++   +     
Sbjct: 539 KDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAV 598

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  +  LCK      A++ F  +  +    N ++Y  LI+GL
Sbjct: 599 IYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 44/349 (12%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI+   + K    D        + S G  PD  +++ ++   C+  R      +L  ++R
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN VTF + I  LC +  I +A  L  +     CE ++ TYN L+NG C  G    
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF  M          CKPNT+TY T++ GLC    +D A EL  +M  ++  P+VVT
Sbjct: 444 ALELFYSMP---------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQG-------------------------------- 318
           +  ++  FC     +EA  L  +MM+ G                                
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554

Query: 319 ---VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              V PD+VT+S I+  L +  ++++A ++  ++   G+ P    YN ++   C     D
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
            A   F  M SNGCM + ++Y TLI        ++E   L  E+ S+G+
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 13/302 (4%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +FN     L +    +    L ++++  G   +I T++ L+N FC  GRV     
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +   C  PN +T+T+L+ GLC   R+  AA L  +     C P+V T+N L++  C
Sbjct: 447 LFYSM--PC-KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+ L E+M     E G  C PN +TYNT++DG+ K+   ++A EL   +    
Sbjct: 504 QKGLMDEAIELVEQMM----EHG--CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++PD+VTY+S+I      +   EA ++F  + D G++P  V ++ I+  LCK    D A 
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
                M+  G  PN  TY TLI+G    D +   R L   + S G    V++ N L  W 
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG----VLNKNLLEEWR 673

Query: 404 CK 405
            K
Sbjct: 674 PK 675



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + + M+  H   P + ++N L   + K+ + +  L L   L S G+ PDI T+S 
Sbjct: 509 DEAIELVEQMME-HGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I    +  RV     +   +      P AV +  ++  LC       A   F       
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 208 CEPDVFTYNTLINGL 222
           C P+  TY TLI GL
Sbjct: 628 CMPNELTYITLIEGL 642


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 214/404 (52%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L+ +    +    F  + S G+ P++YT++IL+   C  G       V
Sbjct: 121 PSVLAYNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PNAVT+ +L+   C    +  A  L    R    +P++ T+N+++NG+C+
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +F+EM            P+ V+YNT++ G CK G   +A  +F +M  + I
Sbjct: 240 AGRMEDARKVFDEMVKEG------LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVT+TS+I   C A +   A  L  EM ++G+Q + +TF+ ++D  CK G +D A  
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +  M    + P+   YN LI+GYC+  ++D AR+L   ME+ G   DVV+Y+T+++ YC
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN D   A  L  +ML  G+ P  +TY++L   L E  ++  A  LF  M    +  D  
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + IDG CK G V  AL L   +  +    ++V+Y+ LI+GL
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/458 (32%), Positives = 228/458 (49%), Gaps = 45/458 (9%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD ML      P V ++NIL   L    H    LS+ + +  AG  P+  T++ L+  FC
Sbjct: 145 FDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G V     ++  +      PN VTF S++ G+C   R+ +A  +F +       PD  
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMAN--------------------GNGE--FGVV--- 248
           +YNTL+ G C+ G +  AL++F EM                      GN E   G+V   
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323

Query: 249 ----CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                + N +T+  +IDG CK+GF+D A     +M+   I P VV Y ++I G+C     
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           +EA+ L  EM  +GV+PDVVT+S I+   CKNG    A +L + M+  GV P+  TY++L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I   C   ++  A  LF +M S G   D V+Y +LI+ +CK  +VE ALSL+ EM+  G+
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKL---------------FDEMRRNHVAADTYTYNNF 469
            P VVTY+ L  GL +  + + A +L               +D + R    A+  +    
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C  G + EA +++++I D  + L+   Y+ LI G
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHG 601



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 201/427 (47%), Gaps = 21/427 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R     P + +FN +   + K    +    +F  +   GL PD  +++ L+  +CK+G
Sbjct: 217 MMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVG 276

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
                  V   + R    P+ VTFTSLI  +C    +  A  L  + R    + +  T+ 
Sbjct: 277 CSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFT 336

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LI+G C+ G    AL    EM           +P+ V YN +I+G C  G +D+A+EL 
Sbjct: 337 ALIDGFCKKGFLDDALLAVREMRQCR------IQPSVVCYNALINGYCMVGRMDEARELV 390

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M+ + + PDVVTY++++  +C   D + A +L  +M++ GV PD +T+S ++  LC+ 
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            ++  A  L + MI  G+ P+  TY +LIDG+C    ++ A  L   M   G + DVV+Y
Sbjct: 451 KRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTY 510

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN---------------TLFLGLFEI 441
           + LIN   K+   +EA  L  ++  +   P  + Y+                L  G    
Sbjct: 511 SVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMK 570

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             +  A K++  +   +   D   Y+  I G C+ G V++AL   + +    +  N  S 
Sbjct: 571 GLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTST 630

Query: 502 NCLIDGL 508
             LI GL
Sbjct: 631 ISLIRGL 637



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 199/452 (44%), Gaps = 60/452 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M++   +P  VS +N L G   K       LS+F  +   G+ PD+ T + LI+  
Sbjct: 249 VFDEMVKEGLAPDGVS-YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVM 307

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     ++  +       N +TFT+LI G C +  + +A     + R    +P V
Sbjct: 308 CKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSV 367

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             YN LING C  G    A  L  EM A G        KP+ VTY+TI+   CK G    
Sbjct: 368 VCYNALINGYCMVGRMDEARELVREMEAKG-------VKPDVVTYSTILSAYCKNGDTHS 420

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A +L  +M +  + PD +TY+S+IR  C      +A  LF  M+  G+QPD VT++ ++D
Sbjct: 421 AFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLID 480

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG------------------------ 367
             CK G +++A  L + M+  GV P+  TY+ LI+G                        
Sbjct: 481 GHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540

Query: 368 --------------------------YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                                     +C+   ++ A K++ S+       D   Y+ LI+
Sbjct: 541 ANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIH 600

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +C+  +V +ALS + +ML  G  P   +  +L  GLFE   V  A ++  ++      A
Sbjct: 601 GHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLA 660

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAI-RDS 492
           D       ID   K G V   L++   + RD 
Sbjct: 661 DAEASKALIDLNLKEGNVDAVLDVLHGMARDG 692



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 161/338 (47%), Gaps = 21/338 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L          D    L + + + G+ PD+ T+S +++ +CK G     F +
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +   P+A+T++SLI+ LC E R+ +A  LF        +PD  TY +LI+G C+
Sbjct: 425 NQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCK 484

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL+L +EM       GV+  P+ VTY+ +I+GL K     +A+ L  K+  E  
Sbjct: 485 EGNVERALSLHDEMVKA----GVL--PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538

Query: 285 NPDVVTYTSVIR---------------GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            P  + Y +++R               GFC     NEA +++  ++D+    D   +SV+
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C+ G + KA    + M+  G  PN+ +  +LI G      +  A ++   + +   
Sbjct: 599 IHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCS 658

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           + D  +   LI+   K  +V+  L +   M   G+ P+
Sbjct: 659 LADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 256/511 (50%), Gaps = 38/511 (7%)

Query: 8   RSFHFT----------SISISALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLR 57
           +S HFT          S S S   C FS+   H R  TSS    +P +P   ++      
Sbjct: 9   QSLHFTNPLAKPTIPQSRSDSIPACRFSNK-THLRNVTSSAEFRQPHFPNLDNR------ 61

Query: 58  LTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCL 117
                 A L K L   C++           NE+L   + ++     P  V    ++ G  
Sbjct: 62  -----DAHLMKLLNRSCRAGKH--------NESLYFLESVVSKGFKPDVVLCTKLIKG-F 107

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
             +++    + + + L + G  PD+Y+++ +I+ F K  ++     V  R+    F+P+ 
Sbjct: 108 FNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDV 166

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           VT+  +I  LC+  ++  A  +  +     C+P V TY  LI      G    AL LF+E
Sbjct: 167 VTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDE 226

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           + +         +P+  TYN II G+CKEG  D+A +    +     NPDVV+Y  ++R 
Sbjct: 227 LVSRG------LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRS 280

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           F   + W + +RL  +M+  G +P+VVT S+++   C+ G++ +A  +LE+M  +G+ P+
Sbjct: 281 FLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPD 340

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           +Y+Y+ LI  +C   ++D A +    M S+GC+ D+V+YNT++   CK    + AL ++ 
Sbjct: 341 SYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFE 400

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           ++   G  PTV  YNT+F  L+      +AL++  EM R  +  D  TYN+ I  LC+ G
Sbjct: 401 KLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDG 460

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V EA+ L   +  ++++  ++S+N ++ G+
Sbjct: 461 LVDEAIGLLVDMEATRFQPTVISFNIVLLGM 491


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 229/424 (54%), Gaps = 11/424 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M+    S   V+ +N L   L K+++ +    L + + S G  PD  T++ 
Sbjct: 62  DEADELFHKMIERGCSANTVA-YNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           +++  C+MG+VS        +    ++P+ V +  L+  L  E ++ EA  LF    +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 207 -ACEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLC 264
               PD+ TYNTLI+G CR   T  A+ LF++ +A G         P+TVTYN+I+ GL 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY-------MPDTVTYNSILLGLA 233

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           ++  +D+A+E+F KM D    P+  TY+ V+ G C   +      L+ EM ++   PDV+
Sbjct: 234 RKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVL 293

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
             + ++D LCK  K+D A ++LE M   G  P+  TYN L+DG C T+ +D A +LF +M
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
             NGC  D+VSY+ ++N  CK   V +A  L+  M+ + + P VVT+N L  GL +  ++
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A  L D M  ++V  D  T    + GLC+     EA+ LF+ + +     +++ +N +
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIV 473

Query: 505 IDGL 508
           + GL
Sbjct: 474 LAGL 477



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/443 (32%), Positives = 229/443 (51%), Gaps = 40/443 (9%)

Query: 88  NEALCIFDYMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDI 142
           +EA   FD M    PS    P V ++N L   L K         LFK ++ A   + PD+
Sbjct: 132 SEAKQFFDSM----PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            T++ LI+ FC++ +      +   ++   + P+ VT+ S++ GL  +S + EA  +F K
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK--- 250
                C P+  TY+ +++G CR G+    L L+EEM            N    ++CK   
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 251 -----------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
                            P+ VTYN ++DGLCK   VDKA ELF  M D    PD+V+Y+ 
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           V+ G C  N  ++A+ LF  M+++ + PDVVTF+++MD LCK GK+D+A  LL++M    
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V P+  T  TL+ G C   + D A +LF  M   G + DV+ +N ++   C+   + +AL
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487

Query: 414 SLYSEML-SKG-IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             +  M+ S G   P VVTY TL   L E  +V++A+  F +M  +  A D   YN  ++
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMN 547

Query: 472 GLCKSGFVLEALELFRAIRDSKY 494
           GL K G  ++A  L +A+++  +
Sbjct: 548 GLRKQGRHIQADRLTQAMKEKGF 570



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 215/406 (52%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K       L + + +   G+ PD+ T++I+++  C+ G+V     +
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++    + N V + +LI GLC +  I  A  L  +      EPD  TYNT+++GLCR
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF--LKMKDE 282
            G    A   F+ M +          P+ V YN ++D L KEG V +A  LF  + M D 
Sbjct: 128 MGKVSEAKQFFDSMPSRG------YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD++TY ++I GFC     +EA +LF +++ +G  PD VT++ I+  L +   MD+A
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             + + M+  G  PN  TY+ ++ G+C    +    +L+  M       DV+  N +I+ 
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK K V++A  +  EM   G  P VVTYN L  GL + + V++A +LF  M  N  A D
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +Y+  ++GLCK+  V +A  LF  + + K   ++V++N L+DGL
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407



 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 203/374 (54%), Gaps = 8/374 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PD+ T+S +I+  CK G+V+    ++  +      P+  T+T ++  LC   ++ EA
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             LF K     C  +   YN LINGLC+  +   A  L EEMA+   E      P+ +TY
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYE------PDNITY 118

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF--IEM 314
           NTI+ GLC+ G V +AK+ F  M     +PDVV Y  ++          EA  LF  ++M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            D+ V PD++T++ ++D  C+  K D+A +L + +I +G  P+T TYN+++ G      +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A ++F  M  +GC  +  +Y+ +++ +C+  ++   L LY EM  K   P V+  N +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
              L +  +V+ A K+ +EM +     D  TYN  +DGLCK+  V +A ELF  + D+  
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 495 ELNIVSYNCLIDGL 508
             +IVSY+ +++GL
Sbjct: 359 APDIVSYSVVLNGL 372



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 2/232 (0%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M ++   PDVVTY+++I G C      EA  +  EM ++GV PDV T+++I+D LC+ GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A  L   MI RG + NT  YN LI+G C  + I+ A KL   M S G   D ++YNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD--EMRR 456
           +++  C+   V EA   +  M S+G  P VV YN L   L++  +V  A  LF   +M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             VA D  TYN  IDG C+     EA++LF+ +    Y  + V+YN ++ GL
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 69/372 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F  ++     P  V+  +IL G LA+  + D    +FK++  +G  P+  T+SI
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLG-LARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  C++G ++    +   +    F+P+ +   ++I  LC   ++ +A  +  +     
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGVV----CK------- 250
             PDV TYN L++GLC+T     A  LF  M + NG       + VV    CK       
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD-NGCAPDIVSYSVVLNGLCKTNKVHDA 381

Query: 251 -------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                        P+ VT+N ++DGLCK G +D+AK+L   M + N+ PD VT T+++ G
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441

Query: 298 FCYANDWNEAKRLFIEMMDQGV-------------------------------------Q 320
            C     +EA RLF  M+++G                                       
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PDVVT++ +++ L + G++D+A    + M   G  P+   YNTL++G     +   A +L
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561

Query: 381 FVSMESNGCMHD 392
             +M+  G + D
Sbjct: 562 TQAMKEKGFLSD 573


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 213/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N L   L +     T + + + ++S G+ PD  T + L+  F + G +     V
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ +  +P  VT   LI G C   R+ +A     +      EPD  TYNT ++GLC+
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            GH   AL + + M     +      P+  TYNT+I+ L K G +D+AK +  +M D   
Sbjct: 315 NGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+ ++I      N   EA  L  E+  +G+ PDV TF+++++ LCK G      R
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYN LID  C   K+ +A  L   MESNGC    V+YNT+I+  C
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M ++GI  + VT+NTL  GL +  +++ A +L ++M +  +  +  
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++   +  + +E+++V+Y  LI+GL
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 205/406 (50%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N     L +N H    L +   +   G  PD++T++ +INC  K G +     +
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           + +++ R C  P+  TF +LI  L +++R+ EA  L  +  V    PDV+T+N LIN LC
Sbjct: 360 VNQMVDRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 418

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   + + LFEEM +        C P+ VTYN +ID LC  G +  A +L  +M+   
Sbjct: 419 KVGDPHLGIRLFEEMKSSG------CTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                VTY ++I   C      EA+ +F +M  QG+    VTF+ ++D LCK  ++D A+
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+E M+  G+ PN  TYN+++  YC    I  A  +  +M +NG   DVV+Y TLIN  
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK    + AL L   M  KGI+PT   YN +   LF  + +  AL LF EM       D 
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY      LC+ G  + EA +    + +  +     S+  L +GL
Sbjct: 653 LTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 208/408 (50%), Gaps = 6/408 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P  ++F  L     +    +  L +  ++  AG  P   T ++LIN +CKMGRV  
Sbjct: 226 HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVED 285

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
               + + +   F P+ VT+ + + GLC    +  A  +         +PDVFTYNT+IN
Sbjct: 286 ALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 345

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            L + G    A  +  +M +        C P+T T+NT+I  L  +  +++A +L  ++ 
Sbjct: 346 CLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALSSQNRLEEALDLARELT 399

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            + ++PDV T+  +I   C   D +   RLF EM   G  PD VT+++++D LC  GK+ 
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A  LL  M   G   +T TYNT+ID  C   +I+ A ++F  M++ G     V++NTLI
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  CK K +++A  L  +M+ +G++P  +TYN++     +   +++A  + + M  N   
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D  TY   I+GLCK+G    AL+L R +R         +YN +I  L
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 201/425 (47%), Gaps = 9/425 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  AL + +  L      P  + +  +   L     +D +  L + +   G         
Sbjct: 69  PEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVR 128

Query: 147 ILINCFCKMGRVSHGF-VVLGRILRSCFTPNA--VTFTSLIKGLCAESRIMEAAALFTKH 203
             +  + ++ R      +VL ++    F   A  V F  L+  L   S++    +++ + 
Sbjct: 129 SFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEM 188

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                +PDV T NTLI  LCR      A+ + EEM++     GV   P+  T+ T++ G 
Sbjct: 189 TGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS----HGVA--PDETTFTTLMQGF 242

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            +EG ++ A  +  KM +   +P  VT   +I G+C      +A     + +  G +PD 
Sbjct: 243 IEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQ 302

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT++  +  LC+NG +  A ++++LM+  G +P+ +TYNT+I+      ++D A+ +   
Sbjct: 303 VTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 362

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   GC+ D  ++NTLI        +EEAL L  E+  KG+ P V T+N L   L ++  
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
               ++LF+EM+ +    D  TYN  ID LC  G +  AL+L   +  +    + V+YN 
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482

Query: 504 LIDGL 508
           +ID L
Sbjct: 483 IIDAL 487



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 7/251 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++N +   L K    +    +F ++++ G+     T + LI+  CK  R+     
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ ++++    PN +T+ S++   C +  I +AA +         E DV TY TLINGLC
Sbjct: 534 LIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLC 593

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T VAL L   M           +P    YN +I  L +   +  A  LF +M +  
Sbjct: 594 KAGRTQVALKLLRGMRIKG------IRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647

Query: 284 INPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             PD +TY  V R  C       EA    +EM+++G  P+  +F ++ + L   G  D  
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYL 707

Query: 343 SRLLELMIWRG 353
              +EL+I + 
Sbjct: 708 ISAIELIIEKA 718


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 199/384 (51%), Gaps = 7/384 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+  F+ ML M P PPP   F+ +   L KNKHY TV+SLFK+  S G+ P++ T +ILI
Sbjct: 77  AVASFNRMLLMRP-PPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILI 135

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NCFC +  ++  F V   IL+  + P+A+T  +LIKGLC    I  A     K      +
Sbjct: 136 NCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQ 195

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D  +Y TLINGLC+ G T     L  ++       G   KP+ V Y TII  LCK   V
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDVVMYTTIIHCLCKNKRV 249

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A +L+ +M  + I+P+V TY ++I GFC   +  EA  L  EM  + + PDV TF+++
Sbjct: 250 GDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNIL 309

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GK+D+A  L E M  + + PN  TY +LIDG C    ++ A  L   M+  G 
Sbjct: 310 IDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 369

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DV SY  L++  CK   +E A   +  +L KG    V TYN +  GL +       + 
Sbjct: 370 QPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD 429

Query: 450 LFDEMRRNHVAADTYTYNNFIDGL 473
           L  +M       D  T+   I  L
Sbjct: 430 LKSKMEGKGCMPDAITFKTIICAL 453



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 172/334 (51%), Gaps = 6/334 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P    F +++  L      +   +LF + +     P++ T N LIN  C   H   A ++
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F  +            P+ +T NT+I GLC  G + +A     K+  +    D V+Y ++
Sbjct: 151 FANILKRGYH------PDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTL 204

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C A +     RL  ++    V+PDVV ++ I+  LCKN ++  A  L   MI +G+
Sbjct: 205 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGI 264

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +PN +TYNTLI G+C+   +  A  L   M+      DV ++N LI+   K   ++EA+S
Sbjct: 265 SPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAIS 324

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ EM  K + P +VTY +L  GL + H +ERA+ L  +M+   +  D Y+Y   +D LC
Sbjct: 325 LFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC 384

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G +  A + F+ +    Y LN+ +YN +I+GL
Sbjct: 385 KGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 418



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 142/282 (50%), Gaps = 6/282 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L   L K      V  L ++L    + PD+  ++ +I+C CK  RV     +   +
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM 259

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +PN  T+ +LI G C    + EA +L  + ++    PDV+T+N LI+ L + G  
Sbjct: 260 IVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKI 319

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A++LFEEM + N        PN VTY ++IDGLCK   +++A  L  KMK++ I PDV
Sbjct: 320 DEAISLFEEMKHKN------MFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            +YT ++   C       AK+ F  ++ +G   +V T++V+++ LCK G       L   
Sbjct: 374 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 433

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           M  +G  P+  T+ T+I      D+ D A K    M + G +
Sbjct: 434 MEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 227/447 (50%), Gaps = 39/447 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +AL + D ML+     P V ++ +L   + K+  +   +++   + + G  P+I T+++
Sbjct: 158 GDALALLDDMLQ-RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNV 216

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  C+ GRV     +L R+    F P+ V++T+++KGLCA  R  +   LF +     
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  T++ L+   CR G    A+ + ++M+         C PNT   N +I+ +CK+G
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQG 330

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A +    M     NPD ++YT+V+RG C A  W  AK L  EM+ +   P+ VTF+
Sbjct: 331 RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVN-------------------------------- 355
             +  LC+ G +++A +L+ELM   G +                                
Sbjct: 391 TFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE 450

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PNT TY TL+ G C  +++D A +L   M    C  + V++N L++++C+   VEEA+ L
Sbjct: 451 PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMEL 510

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            ++M+  G  P ++T+NTL  G+ +    E AL+L   +    V+ DT TY++ +D L +
Sbjct: 511 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSR 570

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYN 502
                EA+++  A++D      +  YN
Sbjct: 571 EDRTEEAIQMLHAVQDMGMRPKVGMYN 597



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 203/381 (53%), Gaps = 14/381 (3%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           + +   ++G   D++ ++ L+  +C+ GR+     ++  +      P+A T+T +I+GLC
Sbjct: 96  VLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLC 152

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGV 247
              R+ +A AL        C+P V TY  L+  +C++     A+N+ +EM A G      
Sbjct: 153 DRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG------ 206

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C PN VTYN II+G+C+EG VD AKE+  ++      PD+V+YT+V++G C A  W++ 
Sbjct: 207 -CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDV 265

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           K LF EM+D+   P+ VTF +++   C+ G +++A ++L+ M   G  PNT   N +I+ 
Sbjct: 266 KVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINA 325

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   ++D A     +M   GC  D +SY T++   C+    E A  L  EM+ K   P 
Sbjct: 326 ICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 385

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            VT+NT    L +   +E+A+KL + M     +    TYN  + G C  G V  ALELF 
Sbjct: 386 EVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN 445

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +     E N ++Y  L+ GL
Sbjct: 446 NL---PCEPNTITYTTLLTGL 463



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 214/504 (42%), Gaps = 84/504 (16%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            L+  CKSSG G        EA+ + D M R     P + ++N++   + +    D    
Sbjct: 182 LLEAVCKSSGFG--------EAMNVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAKE 232

Query: 129 LFKRLNSAGLFPDIYTHS-----------------------------------ILINCFC 153
           +  RL+S G  PDI +++                                   +L+  FC
Sbjct: 233 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 292

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G V     VL ++ +   TPN      +I  +C + R+ +A        ++ C PD  
Sbjct: 293 RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTI 352

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGN------------------------------- 242
           +Y T++ GLCR G    A  L  EM   N                               
Sbjct: 353 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
            E+G  C    VTYN ++ G C +G VD A ELF  +  E   P+ +TYT+++ G C+A 
Sbjct: 413 PEYG--CSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAE 467

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
             + A  L   M+ +    + VTF+V++   C+ G +++A  L+  M+  G  PN  T+N
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           TL+DG       + A +L   + S G   D ++Y+++++   +    EEA+ +   +   
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G++P V  YN +   L +  + ++A+  F  M  N    +  TY   I+GL   G + EA
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 647

Query: 483 LELFRAIRDSKYELNIVSYNCLID 506
               R +    Y   ++S + L D
Sbjct: 648 ----RYVLSELYAKGVLSKSLLED 667



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 161/325 (49%), Gaps = 9/325 (2%)

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           ++ L A   + EAA L          PDV+    LI  LCR G T  A  +    A  +G
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL-RTAEASG 104

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                   +   YNT++ G C+ G +D A+ L   M    + PD  TYT +IRG C    
Sbjct: 105 A-----PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGR 156

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             +A  L  +M+ +G QP VVT++V+++ +CK+    +A  +L+ M  +G  PN  TYN 
Sbjct: 157 VGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNV 216

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I+G C   ++D A+++   + S G   D+VSY T++   C  +  ++   L++EM+ K 
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
             P  VT++ L         VERA+++  +M ++    +T   N  I+ +CK G V +A 
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +    +       + +SY  ++ GL
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGL 361


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 229/429 (53%), Gaps = 13/429 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GD+ L     A+ +F+ M R     P V  +N+L G L K K       LF  ++   L 
Sbjct: 80  GDLKL-----AMELFETMKR-RKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+  T + LI+ +CK G V     +  R+ +    P+ +TF SL+ GLC   RI EA  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYNT 258
             + +     PD FTY+ + +GL ++      AL+L+ E A G G      K +  T + 
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE-AIGKG-----VKIDNYTCSI 247

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +++GLCKEG V+KA+E+   + +  + P  V Y +++ G+C   D + A     +M  +G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++P+ + F+ ++D+ C+   +DKA   ++ M+ +G+ P+  TYN LIDGY          
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           ++   ME NG   +V+SY +LIN  CK+  + EA  +  +M+ +G+ P    YN L  G 
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
             + ++  AL+ FDEM +N + A   TYN+ I GLCK G + EA E+F  I  + +  ++
Sbjct: 428 CTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDV 487

Query: 499 VSYNCLIDG 507
           ++YN LI G
Sbjct: 488 ITYNSLISG 496



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 217/452 (48%), Gaps = 43/452 (9%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D+M R     P      ++   L ++K +D VL LFK +   G  PD   +   +   
Sbjct: 18  LYDFM-RQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K+G +     +   + R    PN   +  LI GLC E RI +A  LF +  V    P+ 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NTLI+G C+ G   VA+ L E M     E      P+ +T+N+++ GLCK   +++A
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVE------PSIITFNSLLSGLCKARRIEEA 190

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDW-NEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           + +  ++K     PD  TY+ +  G   ++D    A  L+ E + +GV+ D  T S++++
Sbjct: 191 RCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLN 250

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK GK++KA  +L+ ++  G+ P    YNT+++GYC    +D A      MES G   
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           + +++N++I+ +C+ + +++A     +M+ KGI P+V TYN L  G   +    R  ++ 
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQIL 370

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEA----------------------------- 482
           +EM  N    +  +Y + I+ LCK G +LEA                             
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV 430

Query: 483 ------LELFRAIRDSKYELNIVSYNCLIDGL 508
                 L  F  +  +     IV+YN LI GL
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGL 462



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 218/452 (48%), Gaps = 17/452 (3%)

Query: 55  SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
           S+R  V +R +    +   CK+ G+ D+       A+ + + M +     P + +FN L 
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKA-GEVDV-------AIGLRERM-KKEKVEPSIITFNSLL 178

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR-ILRSCF 173
             L K +  +    +   +   G  PD +T+SI+ +   K    +   + L R  +    
Sbjct: 179 SGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV 238

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
             +  T + L+ GLC E ++ +A  +          P    YNT++NG C+ G    A+ 
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
             E+M +         +PN + +N++ID  C+   +DKA+E   KM  + I P V TY  
Sbjct: 299 TIEQMESRG------LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G+     ++   ++  EM + G +P+V+++  +++ LCK+GK+ +A  +L  M+ RG
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V PN   YN LIDG C   K+  A + F  M  NG    +V+YN+LI   CK   ++EA 
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++  + S G  P V+TYN+L  G       ++ L+L++ M++  +     T++  I G 
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC 532

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            K G  L+   LF  +       + V YN +I
Sbjct: 533 SKEGIKLKE-TLFNEMLQMNLSPDRVVYNAMI 563



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 186/432 (43%), Gaps = 40/432 (9%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +IL   L K    +    + K L   GL P    ++ ++N +C++G +    + + ++  
Sbjct: 246 SILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES 305

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN + F S+I   C    I +A     K       P V TYN LI+G  R      
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
              + EEM   NGE     KPN ++Y ++I+ LCK+G + +A+ +   M    + P+   
Sbjct: 366 CFQILEEMEE-NGE-----KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G C      EA R F EM   G+   +VT++ ++  LCK GK+ +A  +  L+ 
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479

Query: 351 WRGVNPNTYTYNTLIDGY----------------------------------CLTDKIDH 376
             G  P+  TYN+LI GY                                  C  + I  
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKL 539

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
              LF  M       D V YN +I+ Y +   V++A SL  EM+  G++P   TYN+L L
Sbjct: 540 KETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLIL 599

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  +  ++     L D+M+   +  +  TY+  I G C       A   +R + ++ +  
Sbjct: 600 GHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLP 659

Query: 497 NIVSYNCLIDGL 508
           N+   N L  GL
Sbjct: 660 NVCICNELSTGL 671



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 177/390 (45%), Gaps = 46/390 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN +     + +  D      K++   G+ P + T++ILI+ + ++   S  F +
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PN +++ SLI  LC + +I+EA  +          P+   YN LI+G C 
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429

Query: 225 TGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G    AL  F+EM+ NG G          VTYN++I GLCK G + +A+E+F  +    
Sbjct: 430 VGKLREALRFFDEMSKNGIG-------ATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 284 INPDVVTYTSVIRGFCYANDWNEAK----------------------------------- 308
             PDV+TY S+I G  Y+N  N  K                                   
Sbjct: 483 HCPDVITYNSLISG--YSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK 540

Query: 309 -RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             LF EM+   + PD V ++ ++    + G + KA  L + M+  GV P+  TYN+LI G
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +    K+   + L   M++ G + +  +Y+ LI  +C  KD   A   Y EML  G  P 
Sbjct: 601 HLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           V   N L  GL +  +++ A  +  EM  N
Sbjct: 661 VCICNELSTGLRKDGRLQEAQSICSEMIAN 690



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 15/348 (4%)

Query: 84  LITPNEALCIFDYMLRM------HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           LI     LC+F    ++      +   P V S+  L  CL K+        + + +   G
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           + P+   +++LI+  C +G++         + ++      VT+ SLIKGLC   ++ EA 
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            +F         PDV TYN+LI+G    G++   L L+E M     + G+  KP   T++
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK----KLGL--KPTINTFH 526

Query: 258 TIIDGLCKEGFVDKAKE-LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            +I G  KEG   K KE LF +M   N++PD V Y ++I  +       +A  L  EM+D
Sbjct: 527 PLISGCSKEGI--KLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD 584

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV+PD  T++ ++    K GK+ +   L++ M  +G+ P   TY+ LI G+C     + 
Sbjct: 585 MGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNG 644

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           A   +  M  NG + +V   N L     K+  ++EA S+ SEM++ G+
Sbjct: 645 AYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 1/239 (0%)

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +  EL+  M+ E   P       ++     +  ++    LF EM+  G +PD + +   M
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
               K G +  A  L E M  R V PN + YN LI G C   +I  A KLF  M     +
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + V++NTLI+ YCK  +V+ A+ L   M  + ++P+++T+N+L  GL +  ++E A  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKS-GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +E++ N    D +TY+   DGL KS      AL+L+R       +++  + + L++GL
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGL 252



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 8/267 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL  FD M + +     + ++N L   L K         +F  + S G  PD+ T++ L
Sbjct: 435 EALRFFDEMSK-NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSL 493

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +   G       +   + +    P   TF  LI G C++  I     LF +      
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNL 552

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD   YN +I+    TGH   A +L +EM +     GV  +P+  TYN++I G  KEG 
Sbjct: 553 SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD----MGV--RPDNKTYNSLILGHLKEGK 606

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + + K+L   MK + + P+  TY+ +I+G C   D+N A   + EM++ G  P+V   + 
Sbjct: 607 LSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNE 666

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVN 355
           +   L K+G++ +A  +   MI  G++
Sbjct: 667 LSTGLRKDGRLQEAQSICSEMIANGMD 693


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/431 (35%), Positives = 232/431 (53%), Gaps = 47/431 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK-HYDTVLSLFKRLNSAGLFPDIYTHS 146
           + A+  F+ ML+M  +P  V  FN +   L K K HY TVLSL  ++ S G+ PD++T S
Sbjct: 187 DNAVLSFNRMLQMRHTPSIVE-FNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 245

Query: 147 ILINCFC-KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ILINC+  KMG                + PN +T T+LIKGLC   ++ EA         
Sbjct: 246 ILINCYYFKMG----------------YEPNTITLTTLIKGLCLNGKVNEALLFHDHVLA 289

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                +  TY  LINGLC+ G T  AL +  ++       G +   N V Y+T+IDGLCK
Sbjct: 290 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTVIDGLCK 343

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V  A  L+ +M  + I P VVT+              +A  LF EM+ + + P+V T
Sbjct: 344 DKLVIDAYGLYSEMIVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYT 389

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVN--------PNTYTYNTLIDGYCLTDKIDHA 377
           F++++D LCK+GK+ +A  ++  M+   +N        PNT +YNTLIDG+C + ++ HA
Sbjct: 390 FNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHA 449

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            KL   M   G   +V++YN+L++  CKN  V++A++L +    +GI+P + TYNTL  G
Sbjct: 450 WKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDG 509

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  +++ A  +F ++        T+TYN  I+GLC  G + EA  L   + D+    +
Sbjct: 510 LCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPD 569

Query: 498 IVSYNCLIDGL 508
           +V+Y  +I  L
Sbjct: 570 VVTYQTIIHAL 580



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 186/359 (51%), Gaps = 42/359 (11%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           Y  +M   P  ++   ++ G L  N   +  L     + + G   +  T+ ILIN  CKM
Sbjct: 251 YYFKMGYEPNTITLTTLIKG-LCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKM 309

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH------------ 203
           G+      VL +I       N V ++++I GLC +  +++A  L+++             
Sbjct: 310 GQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTF 369

Query: 204 RVFA---------CEPDVFTYNTLINGLCRTG------HTIV-----ALNLFEEMANGNG 243
           + F+           P+V+T+N L++ LC+ G      + I+     ALNLF EM     
Sbjct: 370 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMH---- 425

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                CKPNTV+YNT+IDG CK G +  A +L  +M+D    P+V+TY S++   C  + 
Sbjct: 426 -----CKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHH 480

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            ++A  L     DQG+QPD+ T++ ++D LCK G++  A  + + ++ +G N  T+TYN 
Sbjct: 481 VDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNI 540

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +I+G CL   +D A  L   ME NGC+ DVV+Y T+I+   +  + ++A  L  E++ +
Sbjct: 541 MINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVR 599


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 239/460 (51%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + +++ +   L K +  D   +  +++ + G+
Sbjct: 234 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD +T++ LI  +   G+      V   + R    P+ V   +L+  LC   +I EA  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGVV---- 248
           +F    +    PDVF+Y  ++NG    G  +   +LF+ M  G+G       F V+    
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAY 406

Query: 249 --------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KP+ VTY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 407 ANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDK 466

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L  E+M+ G++ D+V F  I++ LCK G++  A  + +L
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G++P+   YN L+DGYCL  K++ A ++F +M S G   +VV Y TL+N YCK   
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML KGIKP+ + YN +  GLFE  +   A   F EM  + +A +  TY+ 
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + GL K+    EA+ LF+ +R    +++I++ N +I G+
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686



 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 229/477 (48%), Gaps = 63/477 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG 137
           + P EA  + D + R   +P      N     LA+              ++LF R  S  
Sbjct: 45  LRPEEAHDLLDELQR-RGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRA 103

Query: 138 -----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                L P  YT++IL++C  +  R        G++LR+    +A+  + L+KG C   R
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163

Query: 193 IMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  +   HR     C PDVF+YN L+  LC  G +  A +L   MA G    G VC 
Sbjct: 164 TDEALDILL-HRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG----GTVCS 218

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA--------- 301
           P+ V YNT+IDG  KEG V+KA +LF +M    I PD+VTY+SV+   C A         
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278

Query: 302 --------------------------NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                       W EA R+F EM  Q + PDVV  + +M  LCK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCMH 391
            GK+ +A  + + M  +G NP+ ++Y  +++GY    CL D  D    LF  M  +G   
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD----LFDLMLGDGIAP 394

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+ ++N LI  Y     +++A+ +++EM   G+KP VVTY T+   L  I +++ A++ F
Sbjct: 395 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    V  D Y Y+  I G C  G +L+A EL   I ++   L+IV +  +I+ L
Sbjct: 455 NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 223/457 (48%), Gaps = 23/457 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK---YGKIK-----EARDVFDTM- 352

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+ I+    A       +  LF  +   G+ PDIYT ++LI  +   G +
Sbjct: 353 AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 412

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+ ++I  LC   ++ +A   F +       PD + Y+ L
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N NG      + + V + +II+ LCK G V  A+ +F  
Sbjct: 473 IQGFCTHGSLLKAKELISEIMN-NG-----MRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++PD V Y  ++ G+C      +A R+F  M+  G++P+VV +  +++  CK G+
Sbjct: 527 TVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGR 586

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ +G+ P+T  YN +IDG     +   A+  F  M  +G   +  +Y+ 
Sbjct: 587 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSG 706

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           +     TY+  I  L K G V EA ++F +++++  E
Sbjct: 707 LVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCE 743



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 202/420 (48%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R     P V + N L G L K         +F  +   G  PD+++++I+
Sbjct: 309 EAVRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +   G +     +   +L     P+  TF  LIK       + +A  +F + R    
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 427

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P V TY T+I  LCR G    A+  F +M +     GVV  P+   Y+ +I G C  G 
Sbjct: 428 KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ----GVV--PDKYAYHCLIQGFCTHGS 481

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KAKEL  ++ +  +  D+V + S+I   C      +A+ +F   ++ G+ PD V +++
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  C  GKM+KA R+ + M+  G+ PN   Y TL++GYC   +ID    LF  M   G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                + YN +I+   +      A   + EM   GI     TY+ +  GLF+    + A+
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF E+R  +V  D  T N  I G+ ++  V EA +LF +I  S      V+Y+ +I  L
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 193/414 (46%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P + +FN+L    A     D  + +F  +   G+ P + T+  +I   
Sbjct: 383 LFDLMLG-DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 441

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 442 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 501

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             + ++IN LC+ G  + A N+F+   N      V   P+ V YN ++DG C  G ++KA
Sbjct: 502 VFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKA 555

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+VV Y +++ G+C     +E   LF EM+ +G++P  + +++I+D 
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  N  TY+ ++ G       D A  LF  + +     D
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I    + + VEEA  L++ +   G+ P  VTY+ +   L +   VE A  +F 
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFS 735

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      D+   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 736 SMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 789



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y +  
Sbjct: 413 DKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F S+I  LC   R+M+A  +F       
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD   YN L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIG 585

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M  + I P  + Y  +I G   A     AK  F EM + G+  +  T+S
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  +  T NT+I G   T +++ A+ LF S+  +
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +   V+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPA 806


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 217/438 (49%), Gaps = 30/438 (6%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V + + +   L+K       + +FK + + GL P+   +S LI+  CK  ++  
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L ++ ++  TP+ +T+  LI GLC    +  A A F +     C+PDV+TYN LI+
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 221 GLCRTGHTIVALNLFEEMANGNG---------------------EFGVV---------CK 250
           G C+ G+T  A +   +    NG                     E  V          C 
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P   TYN +++GLCK G +++A +L  K+ D    PDVVTYTS+I G        EA +L
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM  +G+  D V ++ ++ EL + GK+ +AS + + M   G  P+  T +T+IDG   
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +I  A ++F SME+ G   + V Y+ LI+  CK + ++ AL + ++M      P  +T
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 479

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YN L  GL +   VE A   FDEM       D YTYN  I G CK+G    A  +F  + 
Sbjct: 480 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 539

Query: 491 DSKYELNIVSYNCLIDGL 508
            S+   N+V+Y  LI GL
Sbjct: 540 SSRCSANVVTYGALISGL 557



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 204/383 (53%), Gaps = 7/383 (1%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           +  ++L +++ + G  P I T++ L+N  CKMGR+     +L +I+ +  TP+ VT+TSL
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I GL  E R  EA  LF +  +     D   Y  LI  L +TG    A ++++ M +   
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG- 121

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                C P+ VT +T+IDGL K G +  A  +F  M+   + P+ V Y+++I G C A  
Sbjct: 122 -----CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            + A  +  +M      PD +T++V++D LCK+G ++ A    + M+  G  P+ YTYN 
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236

Query: 364 LIDGYCLTDKIDHA-RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           LI G+C     D A   L      NGC  D+ +Y  +++W  KNK +EEA++L  ++ + 
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  PT+ TYN L  GL ++ ++E A+ L  ++  N    D  TY + IDGL K     EA
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
            +LF+ +      L+ V Y  LI
Sbjct: 357 YKLFKEMALRGLALDTVCYTALI 379



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 210/404 (51%), Gaps = 11/404 (2%)

Query: 92  CIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           C  + + +M  +   P   ++N+L   L K+   +   + F  +  AG  PD+YT++ILI
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238

Query: 150 NCFCKMGRVSHGFVVLGR--ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           + FCK G        L +   +  C T +  T+T+++  L    +I EA AL  K     
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGC-TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ VTY ++IDGL KE 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGKEK 351

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A +LF +M    +  D V YT++IR         +A  ++  M   G  PDVVT S
Sbjct: 352 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D L K G++  A R+ + M  RG+ PN   Y+ LI G C   K+D A ++   M+  
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  D ++YN LI+  CK+ DVE A + + EML  G KP V TYN L  G  +    + A
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             +FD+M  +  +A+  TY   I GLCK   + +A   F+ +++
Sbjct: 532 CGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKE 575



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 200/416 (48%), Gaps = 42/416 (10%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           S++K + S G  PD+ T S +I+   K GR+     +   +      PN V +++LI GL
Sbjct: 112 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 171

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C   ++  A  +  + +   C PD  TYN LI+GLC++G    A   F+EM         
Sbjct: 172 CKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG----- 226

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKE--------------------------------- 274
            CKP+  TYN +I G CK G  D A                                   
Sbjct: 227 -CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEE 285

Query: 275 ---LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
              L  K+      P + TY +++ G C      EA  L  +++D G  PDVVT++ ++D
Sbjct: 286 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 345

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            L K  +  +A +L + M  RG+  +T  Y  LI     T KI  A  ++ +M S+GC+ 
Sbjct: 346 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 405

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           DVV+ +T+I+   K   +  A+ ++  M ++G+ P  V Y+ L  GL +  +++ AL++ 
Sbjct: 406 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 465

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +M++     DT TYN  IDGLCKSG V  A   F  + ++  + ++ +YN LI G
Sbjct: 466 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 521



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 177/353 (50%), Gaps = 42/353 (11%)

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           +I EA AL  K     C P + TYN L+NGLC+ G    A++L  ++ + NG     C P
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTP 54

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           + VTY ++IDGL KE    +A +LF +M    +  D V YT++IR         +A  ++
Sbjct: 55  DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M   G  PDVVT S ++D L K G++  A R+ + M  RG+ PN   Y+ LI G C  
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            K+D A ++   M+   C  D ++YN LI+  CK+ DVE A + + EML  G KP V TY
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 234

Query: 432 NTLFLGL-----------------------FEIH-------------QVERALKLFDEMR 455
           N L  G                         +IH             ++E A+ L +++ 
Sbjct: 235 NILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT 294

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            N       TYN  ++GLCK G + EA++L R I D+    ++V+Y  LIDGL
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 169/317 (53%), Gaps = 6/317 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  +   LAKNK  +  ++L +++ + G  P I T++ L+N  CKMGR+     +L 
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 326

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +I+ +  TP+ VT+TSLI GL  E R  EA  LF +  +     D   Y  LI  L +TG
Sbjct: 327 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG 386

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A ++++ M +        C P+ VT +T+IDGL K G +  A  +F  M+   + P
Sbjct: 387 KIPQASSVYKTMTSHG------CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 440

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + V Y+++I G C A   + A  +  +M      PD +T+++++D LCK+G ++ A    
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+  G  P+ YTYN LI G+C     D A  +F  M S+ C  +VV+Y  LI+  CK 
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKR 560

Query: 407 KDVEEALSLYSEMLSKG 423
           + + +A   +  M  +G
Sbjct: 561 RQLTKASLYFQHMKERG 577


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 222/417 (53%), Gaps = 10/417 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL + D ML      P V ++ +L   + K+  +   + +   + + G  P+I T++++
Sbjct: 163 EALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C+ GRV      L R+    F P+ V++T+++KGLCA  R  +   LF +     C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T++ L+   CR G    A+ + E+M+ G+G     C  NT   N +I+ +CK+G 
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGR 335

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A +    M     +PD ++YT+V++G C A  W +AK L  EM+ +   P+ VTF+ 
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +  LC+ G +++A+ L+E M   G   N  TYN L++G+C+  ++D A +LF SM    
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 452

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  + ++Y TL+   C  + ++ A  L +EML K   P VVT+N L     +   ++ A+
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +L ++M  +    +  TYN  +DG+       EALEL   +  +    +IV+Y+ +I
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 213/444 (47%), Gaps = 46/444 (10%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLS---LFKRLNSAGLFPDIYTHSILINCFCKMGR 157
            P  P  SS N     L +    D +     L  R  S G  PD+Y  + LI   C+ GR
Sbjct: 34  RPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGR 93

Query: 158 VSHGFVVLGRILRS----------------C----------------FTPNAVTFTSLIK 185
            S    VL    RS                C                  P+A T+T +I+
Sbjct: 94  TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIR 153

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGE 244
           GLC   R+ EA +L        C+P V TY  L+  +C++     A+ + +EM A G   
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG--- 210

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C PN VTYN II+G+C+EG VD A+E   ++      PD V+YT+V++G C A  W
Sbjct: 211 ----CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            + + LF EMM++   P+ VTF +++   C+ G +++A ++LE M   G   NT   N +
Sbjct: 267 EDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIV 326

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+  C   ++D A +   +M S GC  D +SY T++   C+ +  E+A  L  EM+ K  
Sbjct: 327 INTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC 386

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P  VT+NT    L +   +E+A  L ++M  +    +  TYN  ++G C  G V  ALE
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF ++     + N ++Y  L+ GL
Sbjct: 447 LFYSM---PCKPNTITYTTLLTGL 467



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 204/397 (51%), Gaps = 10/397 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M+  +  P  V+ F++L     +    +  + + ++++  G   +    +I+IN  
Sbjct: 272 LFAEMMEKNCMPNEVT-FDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI 330

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GRV   F  L  +     +P+ +++T+++KGLC   R  +A  L  +     C P+ 
Sbjct: 331 CKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNE 390

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NT I  LC+ G    A  L E+M+    E G  C+ N VTYN +++G C +G VD A
Sbjct: 391 VTFNTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIVTYNALVNGFCVQGRVDSA 444

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ELF  M      P+ +TYT+++ G C A   + A  L  EM+ +   P+VVTF+V++  
Sbjct: 445 LELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+ G MD+A  L+E M+  G  PN  TYNTL+DG       + A +L   + SNG   D
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPD 561

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+Y+++I    +   VEEA+ ++  +   G++P  V YN + L L +    + A+  F 
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            M  N    +  TY   I+GL    F+ E  +L R +
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 44/349 (12%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI+   + K    D        + S G  PD  +++ ++   C+  R      +L  ++R
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN VTF + I  LC +  I +A  L  +     CE ++ TYN L+NG C  G    
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF  M          CKPNT+TY T++ GLC    +D A EL  +M  ++  P+VVT
Sbjct: 444 ALELFYSMP---------CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQG-------------------------------- 318
           +  ++  FC     +EA  L  +MM+ G                                
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554

Query: 319 ---VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              V PD+VT+S I+  L +  ++++A ++  ++   G+ P    YN ++   C     D
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
            A   F  M SNGCM + ++Y TLI        ++E   L  E+ S+G+
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 152/308 (49%), Gaps = 15/308 (4%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +FN     L +    +    L ++++  G   +I T++ L+N FC  GRV     
Sbjct: 387 PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE 446

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +   C  PN +T+T+L+ GLC   R+  AA L  +     C P+V T+N L++  C
Sbjct: 447 LFYSM--PC-KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFC 503

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+ L E+M     E G  C PN +TYNT++DG+  +   ++A EL   +    
Sbjct: 504 QKGLMDEAIELVEQMM----EHG--CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++PD+VTY+S+I      +   EA ++F  + D G++P  V ++ I+  LCK    D A 
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
                M+  G  PN  TY TLI+G    D +   R L   + S G    V++ N L  W 
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG----VLNKNLLEEWR 673

Query: 404 CK--NKDV 409
            K  NK V
Sbjct: 674 PKFSNKTV 681



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 1/135 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + + M+  H   P + ++N L   +  + + +  L L   L S G+ PDI T+S 
Sbjct: 509 DEAIELVEQMME-HGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I    +  RV     +   +      P AV +  ++  LC       A   F       
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 208 CEPDVFTYNTLINGL 222
           C P+  TY TLI GL
Sbjct: 628 CMPNELTYITLIEGL 642


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 217/403 (53%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L ++  +D    +FK ++  G+ PD+ + +ILI  FC++G +     +
Sbjct: 163 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+ V+F+ LI       ++  A A   + R F   PD   Y  +I G CR
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 282

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + +EM       G  C P+ VTYNT+++GLCKE  +  A+ L  +M++  +
Sbjct: 283 AGLMSDALRVRDEMV------GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+T++I G+C     ++A +LF  M++Q ++PD+VT++ ++D +C+ G +DKA+ 
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  R + PN  TY+ LID +C   +++ A      M + G + ++++YN++I  YC
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ +V +      +M+   + P ++TYNTL  G  +  ++  A KL + M +  V  D  
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+G    G V EA  +F  +     E +  +Y  +I+G
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 559



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 211/384 (54%), Gaps = 12/384 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SF IL G   +    +  L ++K +   G+ PD+ + S LI  F + G++ H    
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 165 LGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           L R +R CF   P+ V +T +I G C    + +A  +  +     C PDV TYNTL+NGL
Sbjct: 258 L-REMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+    + A  L  EM     E GV   P+  T+ T+I G C EG +DKA +LF  M ++
Sbjct: 316 CKERRLLDAEGLLNEMR----ERGV--PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 369

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD+VTY ++I G C   D ++A  L+ +M  + + P+ VT+S+++D  C+ G+++ A
Sbjct: 370 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
              L+ MI +G+ PN  TYN++I GYC +  +   +K    M  N    D+++YNTLI+ 
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAA 461
           Y K   + +A  L + M  + ++P VVTYN L  G F +H  V+ A  +F++M    +  
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING-FSVHGNVQEAGWIFEKMCAKGIEP 548

Query: 462 DTYTYNNFIDGLCKSGFVLEALEL 485
           D YTY + I+G   +G   EA +L
Sbjct: 549 DRYTYMSMINGHVTAGNSKEAFQL 572



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 212/399 (53%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+     K   +D V ++   +    +FPD+ TH+++++   + G       ++  +
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P  VT+ S++KGLC      +A  +F +   F   PDV ++  LI G CR G  
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL +++EM +         KP+ V+++ +I    + G +D A     +M+   + PD 
Sbjct: 217 EEALKIYKEMRHRG------IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT VI GFC A   ++A R+  EM+  G  PDVVT++ +++ LCK  ++  A  LL  
Sbjct: 271 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P+  T+ TLI GYC+  K+D A +LF +M +     D+V+YNTLI+  C+  D
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++A  L+ +M S+ I P  VTY+ L     E  QVE A    DEM    +  +  TYN+
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+SG V +  +  + +  +K   ++++YN LI G
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489



 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 206/385 (53%), Gaps = 11/385 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL I+  M R     P + SF+ L G  A+    D  ++  + +   GL PD   ++++
Sbjct: 218 EALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC+ G +S    V   ++     P+ VT+ +L+ GLC E R+++A  L  + R    
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+ T+ TLI+G C  G    AL LF+ M N         +P+ VTYNT+IDG+C++G 
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDIVTYNTLIDGMCRQGD 390

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA +L+  M    I P+ VTY+ +I   C      +A     EM+++G+ P+++T++ 
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+   C++G + K  + L+ M+   V+P+  TYNTLI GY   DK+  A KL   ME   
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+YN LIN +  + +V+EA  ++ +M +KGI+P   TY ++  G       + A 
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570

Query: 449 KLFDEM----RRNHVAADTYTYNNF 469
           +L DEM    +    AA T  + N 
Sbjct: 571 QLHDEMLQRGKEKRRAAGTVQFVNI 595



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 178/331 (53%), Gaps = 6/331 (1%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  T   ++   C      +  A+ ++       PDV T+N +++   R G    A+ L 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           + M +         KP  VTYN+++ GLC+ G  DKA E+F +M D  + PDV ++T +I
Sbjct: 154 DSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 207

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC   +  EA +++ EM  +G++PD+V+FS ++    + GKMD A   L  M   G+ 
Sbjct: 208 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 267

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+   Y  +I G+C    +  A ++   M   GC+ DVV+YNTL+N  CK + + +A  L
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            +EM  +G+ P + T+ TL  G     ++++AL+LFD M    +  D  TYN  IDG+C+
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            G + +A +L+  +   +   N V+Y+ LID
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILID 418



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 145/258 (56%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ VT+N ++D   + G  + A  L   M  + + P +VTY SV++G C +  W++A  +
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM D GV PDV +F++++   C+ G++++A ++ + M  RG+ P+  +++ LI  +  
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+DHA      M   G + D V Y  +I  +C+   + +AL +  EM+  G  P VVT
Sbjct: 248 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YNTL  GL +  ++  A  L +EMR   V  D  T+   I G C  G + +AL+LF  + 
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367

Query: 491 DSKYELNIVSYNCLIDGL 508
           + +   +IV+YN LIDG+
Sbjct: 368 NQRLRPDIVTYNTLIDGM 385



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 128/227 (56%), Gaps = 4/227 (1%)

Query: 285 NPDVVTYT--SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N +V TYT   ++  +C A ++++   +  EM  + V PDVVT +V++D   + G  + A
Sbjct: 90  NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L++ M+ +G+ P   TYN+++ G C +   D A ++F  M+  G   DV S+  LI  
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAA 461
           +C+  ++EEAL +Y EM  +GIKP +V+++ L +GLF    +++ A+    EMR   +  
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D   Y   I G C++G + +AL +   +       ++V+YN L++GL
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%)

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           +E+   +   +  P    +  +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G    A+    L+       NTYT N ++  YC   + D    +   ME      D
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV++N +++   +  D E A++L   M+SKG+KP +VTYN++  GL      ++A ++F 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           EM    VA D  ++   I G C+ G + EAL++++ +R    + ++VS++CLI
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 241/499 (48%), Gaps = 53/499 (10%)

Query: 24  FSSSFPHTRKPTSSISENEP-------------SYPTTTSKLKESLRLTVKDRASLKKFL 70
           F+SS P+   PT   +  +P             + P  ++   + LR+ V+         
Sbjct: 18  FASSHPYPSLPTPKTAAPKPRLNLAYAGAVAPNAVPHRSAASNDRLRVLVR--------- 68

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPP-PVSSFNILFGCLAKNKHYDTVLSL 129
                   +GD+      EA+ + + M  + PS   P ++         +      VL  
Sbjct: 69  --------RGDLE-----EAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVL-- 113

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
                 A   PD+ +++ ++  +C  G++ +   ++  +      P+  T+ +LI+GLC 
Sbjct: 114 ------ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCG 164

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             R   A A+        C PDV TY  L+   C+      A+ L +EM +        C
Sbjct: 165 RGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG------C 218

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ VTYN +++G+C+EG VD A E    +      P+ V+Y  V++G C A  W +A++
Sbjct: 219 APDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEK 278

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM  +G  P+VVTF++++  LC+ G ++ A  +L+ +   G  PN+ +YN ++  +C
Sbjct: 279 LMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFC 338

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K+D A      M S+GC  D+VSYNTL+   C+  +V+ A+ L  ++  KG  P ++
Sbjct: 339 KQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLI 398

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +YNT+  GL +  + E AL+L +EM    +  D  TY+    GLC+ G + EA++ F  +
Sbjct: 399 SYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +D     N V YN ++ GL
Sbjct: 459 QDMGIRPNTVLYNAILLGL 477



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 7/383 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL + D MLR     P V ++ IL     K   Y   + L   +   G  PDI T+++
Sbjct: 169 DNALAVLDDMLR-RGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNV 227

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C+ GRV      L  +      PN V++  ++KGLC   R  +A  L  +     
Sbjct: 228 VVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG 287

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T+N LI+ LCR G    A+ + +++     ++G  C PN+++YN I+   CK+ 
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEILDQIP----KYG--CTPNSLSYNPILHAFCKQK 341

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A      M      PD+V+Y +++   C   + + A  L  ++ D+G  P +++++
Sbjct: 342 KMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 401

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D L K GK ++A  LL  M+ +G+ P+  TY+T+  G C   +I+ A K F  ++  
Sbjct: 402 TVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM 461

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V YN ++   CK +    A+ L++ M+S G  P   TY  L  GL     V+ A
Sbjct: 462 GIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEA 521

Query: 448 LKLFDEMRRNHVAADTYTYNNFI 470
            ++  E+    V + T      I
Sbjct: 522 REMMAELCSRGVVSKTLVNKGAI 544



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 6/192 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N L   L +    D  + L  +L   G  P + +++ +I+   K G+      +
Sbjct: 360 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALEL 419

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+ +T++++  GLC E RI EA   F K +     P+   YN ++ GLC+
Sbjct: 420 LNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCK 479

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              T  A++LF  M + NG     C PN  TY  +I+GL  EG V +A+E+  ++    +
Sbjct: 480 RRATHSAIDLFTYMVS-NG-----CMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533

Query: 285 NPDVVTYTSVIR 296
               +     IR
Sbjct: 534 VSKTLVNKGAIR 545


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 217/403 (53%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L ++  +D    +FK ++  G+ PD+ + +ILI  FC++G +     +
Sbjct: 224 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+ V+F+ LI       ++  A A   + R F   PD   Y  +I G CR
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR 343

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + +EM       G  C P+ VTYNT+++GLCKE  +  A+ L  +M++  +
Sbjct: 344 AGLMSDALRVRDEMV------GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+T++I G+C     ++A +LF  M++Q ++PD+VT++ ++D +C+ G +DKA+ 
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  R + PN  TY+ LID +C   +++ A      M + G + ++++YN++I  YC
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ +V +      +M+   + P ++TYNTL  G  +  ++  A KL + M +  V  D  
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+G    G V EA  +F  +     E +  +Y  +I+G
Sbjct: 578 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620



 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 211/384 (54%), Gaps = 12/384 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SF IL G   +    +  L ++K +   G+ PD+ + S LI  F + G++ H    
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 165 LGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           L R +R CF   P+ V +T +I G C    + +A  +  +     C PDV TYNTL+NGL
Sbjct: 319 L-REMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+    + A  L  EM     E GV   P+  T+ T+I G C EG +DKA +LF  M ++
Sbjct: 377 CKERRLLDAEGLLNEMR----ERGV--PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 430

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD+VTY ++I G C   D ++A  L+ +M  + + P+ VT+S+++D  C+ G+++ A
Sbjct: 431 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
              L+ MI +G+ PN  TYN++I GYC +  +   +K    M  N    D+++YNTLI+ 
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAA 461
           Y K   + +A  L + M  + ++P VVTYN L  G F +H  V+ A  +F++M    +  
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING-FSVHGNVQEAGWIFEKMCAKGIEP 609

Query: 462 DTYTYNNFIDGLCKSGFVLEALEL 485
           D YTY + I+G   +G   EA +L
Sbjct: 610 DRYTYMSMINGHVTAGNSKEAFQL 633



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 203/374 (54%), Gaps = 7/374 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL I+  M R     P + SF+ L G  A+    D  ++  + +   GL PD   ++++
Sbjct: 279 EALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC+ G +S    V   ++     P+ VT+ +L+ GLC E R+++A  L  + R    
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+ T+ TLI+G C  G    AL LF+ M N         +P+ VTYNT+IDG+C++G 
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDIVTYNTLIDGMCRQGD 451

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +DKA +L+  M    I P+ VTY+ +I   C      +A     EM+++G+ P+++T++ 
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+   C++G + K  + L+ M+   V+P+  TYNTLI GY   DK+  A KL   ME   
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+YN LIN +  + +V+EA  ++ +M +KGI+P   TY ++  G       + A 
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 449 KLFDEMRRNHVAAD 462
           +L DEM +   A D
Sbjct: 632 QLHDEMLQRGFAPD 645



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 212/399 (53%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+     K   +D V ++   +    +FPD+ TH+++++   + G       ++  +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P  VT+ S++KGLC      +A  +F +   F   PDV ++  LI G CR G  
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL +++EM +         KP+ V+++ +I    + G +D A     +M+   + PD 
Sbjct: 278 EEALKIYKEMRHRG------IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT VI GFC A   ++A R+  EM+  G  PDVVT++ +++ LCK  ++  A  LL  
Sbjct: 332 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P+  T+ TLI GYC+  K+D A +LF +M +     D+V+YNTLI+  C+  D
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++A  L+ +M S+ I P  VTY+ L     E  QVE A    DEM    +  +  TYN+
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+SG V +  +  + +  +K   ++++YN LI G
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 178/331 (53%), Gaps = 6/331 (1%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  T   ++   C      +  A+ ++       PDV T+N +++   R G    A+ L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           + M +         KP  VTYN+++ GLC+ G  DKA E+F +M D  + PDV ++T +I
Sbjct: 215 DSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 268

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC   +  EA +++ EM  +G++PD+V+FS ++    + GKMD A   L  M   G+ 
Sbjct: 269 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 328

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+   Y  +I G+C    +  A ++   M   GC+ DVV+YNTL+N  CK + + +A  L
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            +EM  +G+ P + T+ TL  G     ++++AL+LFD M    +  D  TYN  IDG+C+
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            G + +A +L+  +   +   N V+Y+ LID
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILID 479



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 145/258 (56%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ VT+N ++D   + G  + A  L   M  + + P +VTY SV++G C +  W++A  +
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM D GV PDV +F++++   C+ G++++A ++ + M  RG+ P+  +++ LI  +  
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+DHA      M   G + D V Y  +I  +C+   + +AL +  EM+  G  P VVT
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YNTL  GL +  ++  A  L +EMR   V  D  T+   I G C  G + +AL+LF  + 
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 491 DSKYELNIVSYNCLIDGL 508
           + +   +IV+YN LIDG+
Sbjct: 429 NQRLRPDIVTYNTLIDGM 446



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 128/227 (56%), Gaps = 4/227 (1%)

Query: 285 NPDVVTYT--SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N +V TYT   ++  +C A ++++   +  EM  + V PDVVT +V++D   + G  + A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L++ M+ +G+ P   TYN+++ G C +   D A ++F  M+  G   DV S+  LI  
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAA 461
           +C+  ++EEAL +Y EM  +GIKP +V+++ L +GLF    +++ A+    EMR   +  
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL-IGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D   Y   I G C++G + +AL +   +       ++V+YN L++GL
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%)

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           +E+   +   +  P    +  +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 71  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G    A+    L+       NTYT N ++  YC   + D    +   ME      D
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV++N +++   +  D E A++L   M+SKG+KP +VTYN++  GL      ++A ++F 
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           EM    VA D  ++   I G C+ G + EAL++++ +R    + ++VS++CLI
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 216/398 (54%), Gaps = 7/398 (1%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N+++G  +    +   + +FK +    + PD+ T S+L+   CK G++     V   +  
Sbjct: 294 NLIYG-YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 352

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN  ++T ++ G   +  +++   LF         PD++T+N LI      G    
Sbjct: 353 KGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDK 412

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A+ +F EM     + GV  KP+ VTY T+I  LC+ G +D A E F +M D+ + PD   
Sbjct: 413 AMIIFNEMR----DHGV--KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I+GFC      +AK L  E+M+ G+  D+V FS I++ LCK G++  A  + +L +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G++P    Y+ L+DGYCL  K++ A ++F +M S G   + V Y TL+N YCK   ++
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           E LSL+ EML KGIKP+ + YN +  GLFE  +   A   F EM  + +A +  TYN  +
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            GL K+    EA+ LF+ +R    ++NI++ N +I G+
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684



 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 229/477 (48%), Gaps = 63/477 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG 137
           + P EA  + D + R   +P      N     LA+              ++LF R  S  
Sbjct: 43  LRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRA 101

Query: 138 -----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                L P  +T++IL++C  +  R        G++LR+    N +    L+KG C   R
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKR 161

Query: 193 IMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             EA  +   HR     C PDVF+Y+ L+  LC  G +  A +L   MA G    G VC 
Sbjct: 162 TDEALDILL-HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 216

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA--------- 301
           P+ V Y+T+IDG  KEG V+KA +LF +M    I PD VTY+SV+   C A         
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276

Query: 302 --------------------------NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                       W EA R+F EM    + PDVVT S++M  LCK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCMH 391
            GK+ +A  + + M  +G NPN ++Y  +++GY    CL D  D    LF  M  +G   
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTD----LFDLMLGDGIAP 392

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+ ++N LI  Y     +++A+ +++EM   G+KP VVTY T+   L  I +++ A++ F
Sbjct: 393 DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    VA D Y Y+  I G C  G +L+A EL   I ++   L+IV ++ +I+ L
Sbjct: 453 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R H   P V + ++L G L K         +F  +   G  P++++++I+
Sbjct: 307 EAVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIM 365

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +   G +     +   +L     P+  TF  LIK       + +A  +F + R    
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 425

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY T+I  LCR G    A+  F +M +     GV   P+   Y+ +I G C  G 
Sbjct: 426 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYHCLIQGFCTHGS 479

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KAKEL  ++ +  ++ D+V ++S+I   C      +A+ +F   ++ G+ P  V +S+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  C  GKM+KA R+ + M+  G+ PN   Y TL++GYC   +ID    LF  M   G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                + YN +I+   +      A   + EM   GI     TYN +  GLF+    + A+
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF E+R  +V  +  T N  I G+ ++  V EA +LF +I  S     +V+Y+ +I  L
Sbjct: 660 FLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNL 719



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 220/457 (48%), Gaps = 23/457 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 300 SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK---YGKIK-----EARDVFDTM- 350

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+ I+    A       +  LF  +   G+ PDIYT ++LI  +   G +
Sbjct: 351 AMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 410

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+ ++I  LC   ++ +A   F +       PD + Y+ L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N      +V       +++II+ LCK G V  A+ +F  
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKLGRVMDAQNIFDL 524

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +  ++P  V Y+ ++ G+C      +A R+F  M+  G++P+ V +  +++  CK G+
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGR 584

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ +G+ P+T  YN +IDG     +   A+  F  M  +G   +  +YN 
Sbjct: 585 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNI 644

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++    KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+ 
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSG 704

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           +     TY+  I  L K G V EA ++F +++++  E
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 194/414 (46%), Gaps = 7/414 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P + +FN+L    A     D  + +F  +   G+ PD+ T+  +I   
Sbjct: 381 LFDLMLG-DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C++G++        +++     P+   +  LI+G C    +++A  L ++        D+
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             ++++IN LC+ G  + A N+F+   N      V   P  V Y+ ++DG C  G ++KA
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F  M    I P+ V Y +++ G+C     +E   LF EM+ +G++P  + +++I+D 
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G+   A      M   G+  N  TYN ++ G       D A  LF  + +     +
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ NT+I    + + VEEA  L++ +   G+ P VVTY+ +   L +   VE A  +F 
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            M+      D+   N+ +  L K   ++ A      I +  + L  ++   L+D
Sbjct: 734 SMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 186/401 (46%), Gaps = 7/401 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF+ M R H   P V ++  +   L +    D  +  F ++   G+ PD Y +  
Sbjct: 411 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FC  G +     ++  I+ +    + V F+S+I  LC   R+M+A  +F       
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNDVVYGTLVNGYCKIG 583

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+   LF +M  + I P  + Y  +I G   A     AK  F EM + G+  +  T++
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYN 643

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L KN   D+A  L + +    V  N  T NT+I G   T +++ A+ LF S+  +
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +  VV+Y+ +I    K   VEEA  ++S M + G +P     N +   L + +++ RA
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                ++   + + +  T    +D     G   E +    A
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPA 804


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 231/422 (54%), Gaps = 8/422 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           ++AL I  ++ + H   P V S+N +L   +   ++     ++FK +  + + P+++T++
Sbjct: 151 DKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI  FC  G +     +  ++      PN VT+ +LI G C   +I +   L     + 
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             EP++ +YN +INGLCR G       +  EM N  G        + VTYNT+I G CKE
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRG-----YSLDEVTYNTLIKGYCKE 323

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G   +A  +  +M    + P V+TYTS+I   C A + N A     +M  +G+ P+  T+
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D   + G M++A R+L  M   G +P+  TYN LI+G+C+T K++ A  +   M+ 
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DVVSY+T+++ +C++ DV+EAL +  EM+ KGIKP  +TY++L  G  E  + + 
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  L++EM R  +  D +TY   I+  C  G + +AL+L   + +     ++V+Y+ LI+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563

Query: 507 GL 508
           GL
Sbjct: 564 GL 565



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 220/416 (52%), Gaps = 11/416 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           +F  ML    SP  V ++NIL    C A N   D  L+LF ++ + G  P++ T++ LI+
Sbjct: 192 VFKEMLESQVSPN-VFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +CK+ ++  GF +L  +      PN +++  +I GLC E R+ E + + T+        
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  TYNTLI G C+ G+   AL +  EM            P+ +TY ++I  +CK G ++
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG------LTPSVITYTSLIHSMCKAGNMN 362

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A E   +M+   + P+  TYT+++ GF      NEA R+  EM D G  P VVT++ ++
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           +  C  GKM+ A  +LE M  +G++P+  +Y+T++ G+C +  +D A ++   M   G  
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D ++Y++LI  +C+ +  +EA  LY EML  G+ P   TY  L         +E+AL+L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +EM    V  D  TY+  I+GL K     EA  L   +   +   + V+Y+ LI+
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 195/427 (45%), Gaps = 56/427 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N++   L +      V  +   +N  G   D  T++ LI  +CK G      V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR   TP+ +T+TSLI  +C    +  A     + RV    P+  TY TL++G  +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  +  EM N NG       P+ VTYN +I+G C  G ++ A  +   MK++ +
Sbjct: 393 KGYMNEAYRVLREM-NDNG-----FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDVV+Y++V+ GFC + D +EA R+  EM+++G++PD +T+S ++   C+  +  +A  
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW-- 402
           L E M+  G+ P+ +TY  LI+ YC+   ++ A +L   M   G + DVV+Y+ LIN   
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 403 ------------------------------------------------YCKNKDVEEALS 414
                                                           +C    + EA  
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++  ML K  KP    YN +  G      + +A  L+ EM ++     T T    +  L 
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686

Query: 475 KSGFVLE 481
           K G V E
Sbjct: 687 KEGKVNE 693



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 196/372 (52%), Gaps = 22/372 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +   MLR H   P V ++  L   + K  + +  +    ++   GL P+  T++ 
Sbjct: 327 HQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F + G ++  + VL  +  + F+P+ VT+ +LI G C   ++ +A A+    +   
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+T+++G CR+     AL +  EM     E G+  KP+T+TY+++I G C++ 
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGI--KPDTITYSSLIQGFCEQR 499

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A +L+ +M    + PD  TYT++I  +C   D  +A +L  EM+++GV PDVVT+S
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTD 372
           V+++ L K  +  +A RLL  + +    P+  TY+TLI+               G+C+  
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A ++F SM       D  +YN +I+ +C+  D+ +A +LY EM+  G     VT  
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679

Query: 433 TLFLGLFEIHQV 444
            L   L +  +V
Sbjct: 680 ALVKALHKEGKV 691



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 21/341 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L          +  +++ + +   GL PD+ ++S +++ FC+   V     V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ +T++SLI+G C + R  EA  L+ +       PD FTY  LIN  C 
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL L  EM     E GV+  P+ VTY+ +I+GL K+    +AK L LK+  E  
Sbjct: 533 EGDLEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586

Query: 285 NPDVVTY---------------TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            P  VTY                S+I+GFC      EA ++F  M+ +  +PD   ++++
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C+ G + KA  L + M+  G   +T T   L+       K++    + V +  +  
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCE 706

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           + +      L+    +  +++  L + +EM   G  P  ++
Sbjct: 707 LSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 36/219 (16%)

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID------------------- 366
           F +++    +   +DKA  ++ L    G  P   +YN ++D                   
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 367 -----------------GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
                            G+C    ID A  LF  ME+ GC+ +VV+YNTLI+ YCK + +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++   L   M  KG++P +++YN +  GL    +++    +  EM R   + D  TYN  
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I G CK G   +AL +   +       ++++Y  LI  +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 204/369 (55%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++YT++ILI  FC +G +  G    G + R+   PN VT+ +LI   C   RI EA  L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
                    +P++ +YN +INGLCR G    A  + EEM    G  G    P+ VTYNT+
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEVTYNTL 121

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ++G CKEG   +A  +  +M    ++P VVTYT++I   C A + N A   F +M  +G+
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P+  T++ ++D   + G +++A R+L  M   G +P+  TYN  I G+C+ ++++ A  
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +   M   G   DVVSY+T+I+ +C+  +++ A  +  EM+ KG+ P  VTY++L  GL 
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           E+ ++  A  L  EM    +  D +TY   I+  C  G + +AL L   +    +  + V
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 500 SYNCLIDGL 508
           +Y+ LI+GL
Sbjct: 362 TYSVLINGL 370



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 211/418 (50%), Gaps = 21/418 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    D    L K ++S G+ P++ +++++IN  C+ G +   + +
Sbjct: 43  PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 102

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +    FTP+ VT+ +L+ G C E    +A  +  +       P V TY  LIN +C+
Sbjct: 103 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 162

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A+  F++M           +PN  TY T+IDG  ++G +++A  +  +M +   
Sbjct: 163 ARNLNRAMEFFDQMRIRG------LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 216

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P VVTY + I G C      EA  +  EM+++G+ PDVV++S I+   C+ G++D+A +
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 276

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+ +GV+P+  TY++LI G C   ++  A  L   M   G   D  +Y TLIN YC
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL-----FDEMRRNHV 459
              D+ +AL L+ EM+ KG  P  VTY+ L  GL +  +   A +L     ++E   + V
Sbjct: 337 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 396

Query: 460 AADTYTYN----------NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             DT   N            I G C  G + EA  +F ++ +  ++     YN +I G
Sbjct: 397 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 454



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 190/339 (56%), Gaps = 6/339 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++RS  +PN  T+  LI+G C+   + +    F +     C P+V TYNTLI+  C+ G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  L + M++         +PN ++YN II+GLC+EG + +A E+  +M  +   PD
Sbjct: 61  IDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 114

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VTY +++ G+C   ++++A  +  EM+  GV P VVT++ +++ +CK   +++A    +
Sbjct: 115 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  RG+ PN  TY TLIDG+     ++ A ++   M  +G    VV+YN  I+ +C  +
Sbjct: 175 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 234

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +EEAL +  EM+ KG+ P VV+Y+T+  G     +++RA ++  EM    V+ D  TY+
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           + I GLC+   + EA +L + + D     +  +Y  LI+
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 333



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 192/368 (52%), Gaps = 22/368 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL I   M+R   SP  V ++  L   + K ++ +  +  F ++   GL P+  T++ 
Sbjct: 132 HQALVIHAEMVRNGVSPS-VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F + G ++  + +L  +  S F+P+ VT+ + I G C   R+ EA  +  +     
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+T+I+G CR G    A  + +EM     E GV   P+ VTY+++I GLC+  
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMV----EKGV--SPDAVTYSSLIQGLCEMR 304

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A +L  +M D  + PD  TYT++I  +C   D N+A  L  EM+ +G  PD VT+S
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 364

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTD 372
           V+++ L K  +  +A RLL  +I+    P+  TY+TLI+               G+C+  
Sbjct: 365 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKG 424

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A ++F SM           YN +I+ +C+  ++ +A +LY EM+  G  P  VT  
Sbjct: 425 LMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVI 484

Query: 433 TLFLGLFE 440
           TL   LF+
Sbjct: 485 TLIKALFK 492



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 198/440 (45%), Gaps = 48/440 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N++   L +         + + +   G  PD  T++ L+N +CK G      V+
Sbjct: 78  PNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVI 137

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R+  +P+ VT+T+LI  +C    +  A   F + R+    P+  TY TLI+G  R
Sbjct: 138 HAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR 197

Query: 225 TGHTIVALNLFEEMANGN----------------------GEFGVVCK-------PNTVT 255
            G    A  +  EM                             GVV +       P+ V+
Sbjct: 198 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 257

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+TII G C++G +D+A ++  +M ++ ++PD VTY+S+I+G C      EA  L  EM+
Sbjct: 258 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 317

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D G+ PD  T++ +++  C  G ++KA  L + MI +G  P+  TY+ LI+G     +  
Sbjct: 318 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 377

Query: 376 HARKLFVSMESNGCMHDVVSYNTLIN---------------WYCKNKDVEEALSLYSEML 420
            A++L   +     +   V+Y+TLI                 +C    + EA  ++  M+
Sbjct: 378 EAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMV 437

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            +  KP    YN +  G      + +A  L+ EM  +     T T    I  L K G   
Sbjct: 438 ERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNE 497

Query: 481 EALEL----FRAIRDSKYEL 496
           E  E+     R+ R ++ EL
Sbjct: 498 EMSEVIGDTLRSCRLNEAEL 517



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 128/224 (57%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++P+V TY  +IRGFC   +  +    F EM   G  P+VVT++ ++D  CK G++D+A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+ M  +G+ PN  +YN +I+G C    +  A ++   M   G   D V+YNTL+N Y
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK  +  +AL +++EM+  G+ P+VVTY  L   + +   + RA++ FD+MR   +  + 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            TY   IDG  + G + EA  +   + +S +  ++V+YN  I G
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 100/195 (51%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+   V P+V T+++++   C  G++ K       M   G  PN  TYNTLID YC   +
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ID A  L  SM S G   +++SYN +IN  C+   ++EA  +  EM  KG  P  VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +     +AL +  EM RN V+    TY   I+ +CK+  +  A+E F  +R   
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 494 YELNIVSYNCLIDGL 508
              N  +Y  LIDG 
Sbjct: 181 LRPNERTYTTLIDGF 195



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 47/304 (15%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA  I + M     SP  V+    + G C+ +    +  L + + +   GL PD+ ++S
Sbjct: 202 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE--RMEEALGVVQEMVEKGLAPDVVSYS 259

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I+ FC+ G +   F +   ++    +P+AVT++SLI+GLC   R+ EA  L  +    
Sbjct: 260 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 319

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGE------- 244
              PD FTY TLIN  C  G    AL+L +EM                NG  +       
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379

Query: 245 ----FGVVCK---PNTVTYNTIID---------------GLCKEGFVDKAKELFLKMKDE 282
               F ++ +   P+ VTY+T+I+               G C +G + +A  +F  M + 
Sbjct: 380 KRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVER 439

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N  P    Y  +I G C   +  +A  L+ EM+  G  P  VT   ++  L K G  ++ 
Sbjct: 440 NHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 499

Query: 343 SRLL 346
           S ++
Sbjct: 500 SEVI 503


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 231/424 (54%), Gaps = 10/424 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYT 144
           ++A  +F  M   +P P  V  FN +   +AK + YD V++L+KR+ +A    + PD+YT
Sbjct: 67  DDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYT 125

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +IL+NCFC+  + S     LG++++    P+ VT +SL+ G C  + I +A  +  +  
Sbjct: 126 CNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               + DV     LI+ LC+    + AL + + M +          PN VTY+++I GLC
Sbjct: 186 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLC 239

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G +  A+    +M  + INP+V+T++++I  +      ++   ++  M+   + P+V 
Sbjct: 240 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 299

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+S ++  LC + ++D+A ++L+LMI +G  PN  TY+TL +G+  + ++D   KL   M
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   + VS NTLI  Y +   ++ AL ++  M S G+ P + +YN +  GLF   +V
Sbjct: 360 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+AL  F+ M++     D  TY   I G+CK+  V EA +LF  ++  + E +  +Y  +
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479

Query: 505 IDGL 508
           I  L
Sbjct: 480 IAEL 483



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 253 TVTYNTII-DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           T+ Y  ++  GL    F D A  LF+ M      P +V +  V+        ++    L+
Sbjct: 50  TIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108

Query: 312 IEMMD-QGVQ--PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             + + +G++  PD+ T +++++  C+  +   A   L  M+  G+ P+  T ++L++G+
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGF 168

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           CL++ I  A  +   ME  G   DVV    LI+  CKN+ V  AL +   M  +GI P V
Sbjct: 169 CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 228

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY++L  GL +  ++  A +   EM    +  +  T++  ID   K G + +   +++ 
Sbjct: 229 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 288

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +     + N+ +Y+ LI GL
Sbjct: 289 MIQMSIDPNVFTYSSLIYGL 308



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 39/202 (19%)

Query: 346 LELMIW-RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME------------------S 386
           L    W R  +  T  Y  ++       K D A  LFV M                   +
Sbjct: 37  LRFRFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIA 96

Query: 387 NGCMHDVV--------------------SYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
              M+DVV                    + N L+N +C+      ALS   +M+  GI+P
Sbjct: 97  KMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEP 156

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +VT ++L  G    + ++ A+ +  +M +  +  D       ID LCK+  V+ ALE+ 
Sbjct: 157 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 216

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
           + ++D     N+V+Y+ LI GL
Sbjct: 217 KRMKDRGISPNVVTYSSLITGL 238


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 218/409 (53%), Gaps = 35/409 (8%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M+   P +  F  +F  L K  H+ TV+SL  ++   G+  D+   +IL+NCFC +G+V 
Sbjct: 1   MNNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQV- 59

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
                                       C   ++ E             + +  +Y TLI
Sbjct: 60  ----------------------------CLNDKVKETLHFHDDVIAKGFQLNQVSYGTLI 91

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +GLC+ G T  A+ +   +       G++ +PN V Y+TII  LCK+  V  A +L+ +M
Sbjct: 92  DGLCKAGETRAAMQVLRNID------GLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM 145

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             + I+PDV+TY +++ G        EA  LF +M+ + ++PD+ TF++++D LCK G+M
Sbjct: 146 LLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEM 205

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            KA  +L +MI + V+P+  TYN+L+DGY L  + + A  +F +M   G   DV SY+ +
Sbjct: 206 KKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVM 265

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           IN  CK K V+EA++L  EM SK + P  VTY++L  GL +  ++  A  L +EM     
Sbjct: 266 INGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQ 325

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            AD  TYN+ +D LCK+  V +A+ L   I+D   + +I +Y  L+DGL
Sbjct: 326 PADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 178/336 (52%), Gaps = 21/336 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  ++  ML    SP  ++   +++GCL   +  + V  LF ++    + PDIYT +IL
Sbjct: 137 DAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAV-GLFNQMLLKNIKPDIYTFNIL 195

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G +     VL  +++    P+ +T+ SL+ G     +  +A  +F        
Sbjct: 196 VDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGV 255

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV +Y+ +INGLC+T     A+NL +EM + +        PNTVTY+++IDGL K G 
Sbjct: 256 TPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKS------MAPNTVTYSSLIDGLHKSGR 309

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A +L  +M +     DV+TY S++   C  +  ++A  L  ++ DQG+QPD+ T+++
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LCKNG++  A  + +++              LI GY L    D A  L   ME NG
Sbjct: 370 LVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNG 415

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           C  + V++  LI    +N   ++A+ L  EM+++G+
Sbjct: 416 CTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 223/415 (53%), Gaps = 10/415 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML     P  V++FN L   L K         LF ++   G+ P+++T +I I   
Sbjct: 282 LFDEMLECCLCPD-VTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     +LG + R    P+ VT+ ++I GLC +SR++EA     K      EP+ 
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FTYN++I+G C+ G  + A  + ++            KP+  TY ++++G C++G  D+A
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKG------FKPDEFTYCSLVNGFCQDGDPDQA 454

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F     + + P ++ Y ++I+G C       A +L  EM ++G +PD+ T+++I++ 
Sbjct: 455 MAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIING 514

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G +  A+ L+   I +G  P+ +TYNTL+DGYC   K+D A +L   M S G   D
Sbjct: 515 LCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPD 574

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V++YNTL+N  CK    EE + ++  M  KG  P ++TYNT+   L    +V  A+ L  
Sbjct: 575 VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLG 634

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN--IVSYNCLI 505
           EM+   +  D  ++   I G CK G +  A  LFR + + +Y+++    +YN +I
Sbjct: 635 EMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM-EKQYDVSHTTATYNIII 688



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 199/385 (51%), Gaps = 6/385 (1%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D    LF  +    L PD+ T + L++  CK G V     +  ++L+    PN  TF   
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I+GLC E  +  A  L          PDV TYNT+I GLCR    + A     +M NG  
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           E      PN  TYN+IIDG CK+G V  A  +      +   PD  TY S++ GFC   D
Sbjct: 397 E------PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 450

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            ++A  +F + + +G++P ++ ++ ++  LC+ G +  A +L+  M  +G  P+ +TYN 
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I+G C    +  A  L     + GC+ D+ +YNTL++ YC+   ++ A+ L + M S+G
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           + P V+TYNTL  GL +  + E  +++F  M     A +  TYN  I+ LC S  V EA+
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAV 630

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +L   ++      ++VS+  LI G 
Sbjct: 631 DLLGEMKSKGLTPDVVSFGTLITGF 655



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 221/417 (52%), Gaps = 8/417 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD +L+     P + +FNI    L K    D  + L   ++  GL PD+ T++ +I   
Sbjct: 317 LFDKVLK-RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGL 375

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+  RV      L +++   F PN  T+ S+I G C +  +++A  +         +PD 
Sbjct: 376 CRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDE 435

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FTY +L+NG C+ G    A+ +F++        G   +P+ + YNT+I GLC++G +  A
Sbjct: 436 FTYCSLVNGFCQDGDPDQAMAVFKD------GLGKGLRPSIIVYNTLIKGLCQQGLILPA 489

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L  +M ++   PD+ TY  +I G C     ++A  L  + + +G  PD+ T++ ++D 
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+  K+D A  L+  M  +G+ P+  TYNTL++G C T K +   ++F +M   GC  +
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++YNT+I   C +K V EA+ L  EM SKG+ P VV++ TL  G  ++  ++ A  LF 
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669

Query: 453 EMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M + + V+  T TYN  I    +   +  AL LF  ++ +  + +  +Y  LIDG 
Sbjct: 670 GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGF 726



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 222/456 (48%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+  F+ M  +    P V S+N +   L +  +++    ++ R+    +  D+YT++I
Sbjct: 172 QEAVDTFERM-DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 148 LINCFCKMGR-------------------------VSHGFVVLG----------RILRSC 172
            I  FC+ GR                         V  GF   G           +L  C
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+  TF  L+  LC +  ++E+  LF K       P++FT+N  I GLC+ G    A+
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L   ++          +P+ VTYNT+I GLC++  V +A+E   KM +    P+  TY 
Sbjct: 351 RLLGCVSREG------LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+I G+C      +A R+  + + +G +PD  T+  +++  C++G  D+A  + +  + +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+   YNTLI G C    I  A +L   M   GC  D+ +YN +IN  CK   + +A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L  + ++KG  P + TYNTL  G     +++ A++L + M    +  D  TYN  ++G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+    E +E+F+A+ +     NI++YN +I+ L
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 185/394 (46%), Gaps = 45/394 (11%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PD +T+  L+N FC+ G       V    L     P+ + + +LIKGLC +  I+ A
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L  +     C+PD++TYN +INGLC+ G    A +L  +           C P+  TY
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG------CIPDIFTY 543

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT++DG C++  +D A EL  +M  + + PDV+TY +++ G C      E   +F  M +
Sbjct: 544 NTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE 603

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G  P+++T++ I++ LC + K+++A  LL  M  +G+ P+  ++ TLI G+C    +D 
Sbjct: 604 KGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDG 663

Query: 377 AR------------------------------------KLFVSMESNGCMHDVVSYNTLI 400
           A                                     +LF  M+ NGC  D  +Y  LI
Sbjct: 664 AYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLI 723

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           + +CK  +V +      E + KG  P++ T+  +   L   H+V+ A+ +   M +  + 
Sbjct: 724 DGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIV 783

Query: 461 ADTYTYNNFIDGLCKSGFVLEALE-LFRAIRDSK 493
            D  T N   +   K      A E L+  +RD K
Sbjct: 784 PD--TVNTIFEADKKGHITYHAYEFLYDGVRDKK 815



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 185/375 (49%), Gaps = 11/375 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++A+ +F   L      P +  +N L   L +       L L   +   G  PDI+T++
Sbjct: 451 PDQAMAVFKDGLG-KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++IN  CKMG +S    ++G  +     P+  T+ +L+ G C + ++  A  L  +    
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV TYNTL+NGLC+T  +   + +F+ M          C PN +TYNTII+ LC  
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG------CAPNIITYNTIIESLCNS 623

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
             V++A +L  +MK + + PDVV++ ++I GFC   D + A  LF  M  Q  V     T
Sbjct: 624 KKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTAT 683

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +++I+    +   M  A RL   M   G +P+ YTY  LIDG+C T  ++   K  +   
Sbjct: 684 YNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENI 743

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G +  + ++  ++N  C    V+EA+ +   M+ K I P  V  NT+F    + H   
Sbjct: 744 EKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEADKKGHITY 801

Query: 446 RALK-LFDEMRRNHV 459
            A + L+D +R   +
Sbjct: 802 HAYEFLYDGVRDKKI 816



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 182/383 (47%), Gaps = 66/383 (17%)

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGL--------------------------- 222
           + +I EA   F +  +F C+P V++YN ++N L                           
Sbjct: 168 KGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYT 227

Query: 223 --------CRTGHTIVALNLFEEM---------------ANGNGEFG------------- 246
                   CRTG    AL L   M                 G  EFG             
Sbjct: 228 YTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287

Query: 247 --VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
              +C P+  T+N ++  LCK+GFV +++ LF K+    + P++ T+   I+G C     
Sbjct: 288 ECCLC-PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           + A RL   +  +G++PDVVT++ ++  LC+  ++ +A   L  M+  G  PN +TYN++
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           IDGYC    +  A ++       G   D  +Y +L+N +C++ D ++A++++ + L KG+
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           +P+++ YNTL  GL +   +  AL+L +EM       D +TYN  I+GLCK G + +A  
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           L           +I +YN L+DG
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDG 549



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 148/299 (49%), Gaps = 11/299 (3%)

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL---CKEGF 268
           +FTY +++  L   G      NL  EM +           NT+     ++ +    ++G 
Sbjct: 119 LFTYKSMLQKLGFHGKFNEMENLLSEMRSN--------LDNTLLEGVYVEAMRFYGRKGK 170

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A + F +M   N +P V +Y +++        +N+A ++++ M D+ V+ DV T+++
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +   C+ G+   A RLL  M   G   N   Y T++ G+      D AR+LF  M    
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DV ++N L++  CK   V E+  L+ ++L +G+ P + T+N    GL +   ++RA+
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +L   + R  +  D  TYN  I GLC+   V+EA E    + +  +E N  +YN +IDG
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 172/374 (45%), Gaps = 22/374 (5%)

Query: 144 THSILINCFC-KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           T   L++ FC K   V    + L +  +  F     T+ S+++ L    +  E   L ++
Sbjct: 85  TDRDLVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSE 144

Query: 203 HRVFACEPDVFTYNTLINGL--------CRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
            R           NTL+ G+         R G    A++ FE M   N      C P+  
Sbjct: 145 MRSN-------LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFN------CDPSVY 191

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           +YN I++ L + G+ ++A +++++MKD+ +  DV TYT  I+ FC       A RL   M
Sbjct: 192 SYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNM 251

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
              G   + V +  ++    + G  D+A  L + M+   + P+  T+N L+   C    +
Sbjct: 252 PVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFV 311

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             + +LF  +   G   ++ ++N  I   CK   ++ A+ L   +  +G++P VVTYNT+
Sbjct: 312 LESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTV 371

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL    +V  A +   +M       + +TYN+ IDG CK G V++A  + +      +
Sbjct: 372 ICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGF 431

Query: 495 ELNIVSYNCLIDGL 508
           + +  +Y  L++G 
Sbjct: 432 KPDEFTYCSLVNGF 445


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 226/438 (51%), Gaps = 39/438 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD++     +A   +  ML    SP  V+ +N +   L+K +  D  + +   +    +
Sbjct: 24  EGDVD-----KAYITYHEMLDRRVSPDAVT-YNSIIAALSKAQAMDRAMEVLTVM----V 73

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++ +++ +C  G+      +  ++      P+ VT+ SL+  LC   +  EA  
Sbjct: 74  MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARK 133

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGV-VCK-- 250
           +F        +PD+ TY TL++G    G     H ++AL +   M   +  F + +C   
Sbjct: 134 IFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYT 193

Query: 251 ---------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
                                PN V Y T+IDGLCK G +D A   F +M D+ + P+VV
Sbjct: 194 KQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVV 253

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            YTS+I   C  + W +A+ L  E++DQG+ P++V F+ I+D LCK G++ ++ +L +L+
Sbjct: 254 VYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLL 313

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              GVNP+  TY+TLIDGYCL  K+D A KL   M S G   D V+Y+TLIN YCK   +
Sbjct: 314 GHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRM 373

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+AL+L+ EM S G+ P ++TYN +  GLF   +   A +L+  +  +    +  TYN  
Sbjct: 374 EDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433

Query: 470 IDGLCKSGFVLEALELFR 487
           +    K+  ++     FR
Sbjct: 434 LMDFAKTNSLMMHFGCFR 451



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 196/404 (48%), Gaps = 45/404 (11%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+ +++ +I+   K G V   ++    +L    +P+AVT+ S+I  L     +  A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
            T        P+ FTYN++++G C +G +  A+ +F +M +   E      P+ VTYN++
Sbjct: 69  LT----VMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE------PDVVTYNSL 118

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL--------- 310
           +D LCK G   +A+++F  M    + PD+ TY +++ G+       E   L         
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 311 --------------------------FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                                     F +M  QG+ P+ V +  ++D LCK G++D A  
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             E MI +G+ PN   Y +LI   C  DK + A +L   +   G   ++V +NT+++  C
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V E+  L+  +   G+ P V+TY+TL  G     +++ A+KL   M    +  D+ 
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY+  I+G CK   + +AL LF+ +  +    +I++YN ++ GL
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 10/301 (3%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV +YNT+I+GL + G    A   + EM +          P+ VTYN+II  L K  
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR------VSPDAVTYNSIIAALSKAQ 60

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A E+   M    + P+  TY S++ G+C +    +A  +F +M   G++PDVVT++
Sbjct: 61  AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD LCKNGK  +A ++ + M+ RG+ P+  TY TL+ GY     +     L   M  N
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D   +N LI  Y K + V+E + ++S+M  +G+ P  V Y T+  GL ++ +++ A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  F++M    +  +   Y + I  LC      +A EL   I D     NIV +N ++D 
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 508 L 508
           L
Sbjct: 297 L 297


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 212/385 (55%), Gaps = 9/385 (2%)

Query: 126 VLSLFKRLNSAGLF---PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           VL +F+++N+ G F   P +  ++ ++    K   +     V   +L +  +PN  TF +
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           ++ G C    ++EA    +K       PD FTY +LI G CR      A  +F  M    
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                 C+ N V+Y  +I GLC+ G +++A +LF  M ++N  P V TYT +I     + 
Sbjct: 260 ------CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              EA  LF EM ++G +P+V T++V++D LCK  KMD+A ++L  M  +G+ P+  TYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LIDGYC    ID A ++   MESN C  +  +YN LI   CK + V +A++L ++ML +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            + P+++TYN+L  G  +++ +E A +L   M  N +  D +TY+ FID LCK G V EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
             LF +++    + N V Y  LIDG
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDG 518



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 206/401 (51%), Gaps = 7/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VS  N++ G L +    +  L LF  +      P + T+++LI      GR      +  
Sbjct: 265 VSYTNLIHG-LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN  T+T LI GLC E+++ EA  + ++       P V TYN LI+G C+ G
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  + + M + +      C PNT TYN +I GLCK+  V KA  L  KM +  ++P
Sbjct: 384 MIDDAFEILDLMESNS------CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            ++TY S+I G C  ND   A RL   M + G+ PD  T+SV +D LCK G++++A  L 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  +GV  N   Y  LIDGYC   KID A  L   M ++ C+ +  +YN LI   CK 
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K ++EA SL ++ML+ G+KPTVVTY  L   + +    + ALK+F+ M       D  TY
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             F+      G + E  ++   + +     ++V+Y  LIDG
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N +   L+K    D + +++  L +  + P+IYT + ++N +CK+G V    + 
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +I+++   P+  T+TSLI G C    +  A  +F       C+ +  +Y  LI+GLC 
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL LF +M   N      C P   TY  +I  L   G   +A  LF +MK++  
Sbjct: 277 AGRINEALKLFADMTEDN------CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V TYT +I G C  N  +EA+++  EM ++G+ P VVT++ ++D  CK G +D A  
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+LM      PNT TYN LI G C   K+  A  L   M        +++YN+LI+  C
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+E A  L S M   G+ P   TY+     L +  +VE A  LFD ++   V A+  
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   IDG CK G +  A  L   + +     N  +YN LI+GL
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 201/450 (44%), Gaps = 36/450 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + + ML    SP  ++ +N L     K    ++   L   +N  GL PD +T+S+
Sbjct: 421 HKAMALLNKMLERKLSPSLIT-YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I+  CK GRV     +   +       N V +T+LI G C   +I  A +L  +    A
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+ +TYN LI GLC+      A +L  +M       GV  KP  VTY  +I  + K+G
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT----MGV--KPTVVTYTILIGEMLKDG 593

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D A ++F  M      PDV TYT+ +  +       E   +  +M ++G+ PD+VT++
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR--------- 378
           V++D   + G   +A   L+ M+  G  P+ Y  + LI      +++   R         
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713

Query: 379 --------------------KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
                               KLF  M  +GC  DV  Y  LI  +C+ + +EEA  L   
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M  +G+ P+   YN+L     ++     A++L D M  N +     +Y   + GL   G 
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +A  +F  +    Y  + V++  LIDGL
Sbjct: 834 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 184/416 (44%), Gaps = 35/416 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++    L K    +   +LF  + + G+  +   ++ LI+ +CK+G++   + +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+L     PN+ T+  LI+GLC E ++ EA++L  K      +P V TY  LI  + +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL +F  M +     G   +P+  TY   +     +G +++  ++  KM +E I
Sbjct: 592 DGAFDHALKVFNHMVS----LGY--QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK--- 341
            PD+VTYT +I G+      + A      M+D G +P +   S+++  L    +M +   
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705

Query: 342 --------------------------ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                                     A +L E M+  G   +   Y  LI G+C  ++++
Sbjct: 706 EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 765

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A+ L   M+  G       YN+L++  CK     EA+ L   M+  G+ P + +Y  L 
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
            GL+     E+A  +F  +       D   +   IDGL K   V E  EL   + +
Sbjct: 826 CGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 35/347 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N+L   L K K      SL  ++ + G+ P + T++ILI    K G   H   V
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++   + P+  T+T+ +    ++  + E   +  K       PD+ TY  LI+G  R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK----------- 273
            G T  A +  + M +        CKP+    + +I  L  E  + + +           
Sbjct: 662 LGLTHRAFDFLKCMVDTG------CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNV 715

Query: 274 ------------------ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
                             +LF KM +     DV  Y ++I GFC      EA+ L   M 
Sbjct: 716 NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 775

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++G+ P    ++ ++D  CK G   +A RL++ M+  G+ P   +Y  L+ G  +    +
Sbjct: 776 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 835

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            A+ +F  + S G  +D V++  LI+   K   V+E   L   M  K
Sbjct: 836 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 8/172 (4%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           K   Y+  L LF+++   G   D+  +  LI  FC+  R+     ++  +     +P+  
Sbjct: 725 KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 784

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
            + SL+   C      EA  L          P + +Y  L+ GL   G    A  +F  +
Sbjct: 785 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 844

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL--FLKMKDENINPDV 288
            +    +      + V +  +IDGL K   VD+  EL   ++ KD     D+
Sbjct: 845 LSCGYNY------DEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADI 890


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/411 (33%), Positives = 215/411 (52%), Gaps = 6/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R   + P   S N L   L+K+ +   V   F  +  AG+ P ++T++++I+  CK G 
Sbjct: 245 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           + +   +  ++     +P+ VT+ SLI G      + E A+LF + +   C PD+ TYN 
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LIN  C+      A   F EM N NG      KPN VTY+T+ID  CKEG +  A +LF+
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLFV 418

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+   + P+  TYTS+I   C A +  EA +L  +M+  GV+ ++VT++ ++D LCK G
Sbjct: 419 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 478

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +M +A  +   M+  G++PN   Y  L+ GY   ++++ A K+   M       D++ Y 
Sbjct: 479 RMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYG 538

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           ++I  +C  + +EE   +  EM S+GI    V   T+    F+  +   AL  F EM+  
Sbjct: 539 SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDV 598

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V A   TY   IDGLCK+G V  A++ F  +     + N+  Y  LIDGL
Sbjct: 599 GVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 649



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 203/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    + V SLF  +   G  PDI T++ LINC+CK  ++   F  
Sbjct: 322 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEY 381

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +   PN VT+++LI   C E  +  A  LF   R     P+ FTY +LI+  C+
Sbjct: 382 FSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCK 441

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  L  +M       GV  K N VTY  ++DGLCK G + +A+E+F  M  + I
Sbjct: 442 AGNLTEAWKLLNDMLQA----GV--KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+   YT+++ G+  A    +A ++  +M +  ++PD++ +  I+   C   K+++   
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE M  RG++ N     T+ID Y    K   A   F  M+  G    +V+Y  LI+  C
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 615

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VE A+  +  MLS G++P V  Y +L  GL + + +E A KLFDEM+   +  D  
Sbjct: 616 KAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDIT 675

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   IDG  K G + EAL L   + +   E ++  Y  L+ G 
Sbjct: 676 AFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 148/261 (56%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +C   +  ++ +     + G +++A E F +M++    P   +   ++     + +    
Sbjct: 214 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           ++ F +M+  G+ P V T++V++D LCK G ++ + RL   M   G++P+  TYN+LIDG
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y     ++    LF  M+  GC+ D+++YN LIN YCK + +  A   +SEM + G+KP 
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY+TL     +   ++ A+KLF +MRR  +  + +TY + ID  CK+G + EA +L  
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +  +  +LNIV+Y  L+DGL
Sbjct: 454 DMLQAGVKLNIVTYTALLDGL 474



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 10/320 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  L   L K         +F+ +   G+ P+   ++ L++ + K  R+     +L 
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 523

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--TKHRVFACEPDVFTYNTLINGLCR 224
           ++      P+ + + S+I G C++ ++ E   +    K R  +  P + T  T+I+   +
Sbjct: 524 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST--TIIDAYFK 581

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G +  ALN F+EM +      V  +   VTY  +IDGLCK G V+ A + F +M    +
Sbjct: 582 AGKSSDALNFFQEMQD------VGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGL 635

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V  YTS+I G C  N    AK+LF EM  +G+ PD+  F+ ++D   K+G + +A  
Sbjct: 636 QPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 695

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  M    +  + + Y +L+ G+    ++  ARK F  M   G + + V    L+  Y 
Sbjct: 696 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYY 755

Query: 405 KNKDVEEALSLYSEMLSKGI 424
           K   ++EA+ L +EM   G+
Sbjct: 756 KRGQLDEAIELKNEMERMGL 775



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%)

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           N C+     ++ L + + +   +EEA   +S M +    P   + N L   L +    + 
Sbjct: 213 NICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQL 272

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             K F++M    +A   +TYN  ID LCK G +  +  LF  +R+     ++V+YN LID
Sbjct: 273 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 332

Query: 507 G 507
           G
Sbjct: 333 G 333



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 6/164 (3%)

Query: 95  DYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           DY  RM      P V+ +  L   L KN   ++   LF  +   G+ PDI   + LI+  
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 684

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G +    V++ R+       +   +TSL+ G      + +A   F +       P+ 
Sbjct: 685 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 744

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
                L+    + G    A+ L  EM       G++ +  T+ +
Sbjct: 745 VLCICLLREYYKRGQLDEAIELKNEME----RMGLITESATMQF 784


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 217/430 (50%), Gaps = 50/430 (11%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  +NI+   L +N   D  + +F+++N   + PD +++ ILI+   K G+++    +  
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP---------------- 210
           ++L S  TP+ V +TSLI GLC  +   +A  LF       C P                
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407

Query: 211 -------------------DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
                              DV TYNT+++GLC++     AL LF EM        + C P
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER------LGCTP 461

Query: 252 NTVTYNTIIDGLCKE---------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
           N  ++NTII GLC++         G +D+A  L  +M D+   PDVVTY+++I G C   
Sbjct: 462 NRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 521

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
             ++A+ L  +M+ +  +P VVT + ++  LCK G++ +A  +L+ M+  G +P+  TYN
Sbjct: 522 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 581

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           TL+ G+C   + + AR+L   M + G   +VV+Y  L++  CK   + EA  ++++M S 
Sbjct: 582 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 641

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P + TY  L LG     QV+  LKLF EM    ++ D   Y      LCKSG    A
Sbjct: 642 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 701

Query: 483 LELFRAIRDS 492
           LE+ R  R+S
Sbjct: 702 LEILREGRES 711



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 217/464 (46%), Gaps = 48/464 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL ++    R +   P + + N+L          D    L + +      PD  ++  
Sbjct: 197 DEALQVY----RENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCT 252

Query: 148 LINCFCKMGRVSHGFVVLG-RILRSCFTPNAVT-----FTSLIKGLCAESRIMEAAALFT 201
           +++  CK GRV     + G R L S  + ++       +  +I GLC   RI EA  +F 
Sbjct: 253 VLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFE 312

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------- 248
           K       PD ++Y  LI+GL + G    A NLF+++ +       V             
Sbjct: 313 KMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMAN 372

Query: 249 ----------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
                           C P+ VTYN +ID  CK G +++A +L  KM ++   PDVVTY 
Sbjct: 373 SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYN 432

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM---------DELCKNGKMDKAS 343
           +V+ G C ++   EA  LF EM   G  P+  + + I+         D+ C+ GK+D+A 
Sbjct: 433 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAF 492

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           RLL+ M   G  P+  TY+TLI G C   ++D AR L   M    C   VV+ NTLI+  
Sbjct: 493 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 552

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   ++EA  +   M+S G  P VVTYNTL  G     Q ERA +L  +M    +A + 
Sbjct: 553 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            TY   + GLCK+  + EA  +F  ++ S    N+ +Y  LI G
Sbjct: 613 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 656



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 209/454 (46%), Gaps = 55/454 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N+A  +F  +L    +P  V+  +++ G C+A +  +D    LF  +N  G  P   T++
Sbjct: 340 NDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS--FDDARELFADMNRRGCPPSPVTYN 397

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++I+  CK G +     ++ +++     P+ VT+ +++ GLC  SR+ EA  LF +    
Sbjct: 398 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 457

Query: 207 ACEPDVFTYNTLINGLCRT---------GHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            C P+  ++NT+I GLC+          G    A  L + M + +G       P+ VTY+
Sbjct: 458 GCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD-DGHV-----PDVVTYS 511

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T+I GLC    VD A+ L   M      P VVT  ++I G C A    EA+ +   M+  
Sbjct: 512 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 571

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  PDVVT++ ++   C+ G+ ++A  LL  M+ RG+ PN  TY  L+ G C  +++  A
Sbjct: 572 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 631

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL- 436
             +F  M+S+GC  ++ +Y  LI  +C    V+  L L+ EM+  GI P  V Y TL   
Sbjct: 632 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 691

Query: 437 ------------------------------------GLFEIHQVERALKLFDEMRRNHVA 460
                                               GL E  ++E AL    +M R    
Sbjct: 692 LCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQL 751

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                  + + GLCKSG   EA  +   I D  Y
Sbjct: 752 PAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY 785



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 220/506 (43%), Gaps = 82/506 (16%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  N+    EA+ IF  M   H   P V  +N+L   L+K +  + V  + + +   G 
Sbjct: 18  QGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGC 75

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
           FPD +T + ++   CK G++    +V+  +      P   T + L   LC    +  A  
Sbjct: 76  FPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQ 135

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEFGVVC---- 249
           L     V     +   YN ++  LC+      AL L   M+        G    V     
Sbjct: 136 LLEIMPV----ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLM 191

Query: 250 -----------------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
                            +P  VT N +++G C  G VDKA+EL   M DE   PD V+Y 
Sbjct: 192 DSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYC 251

Query: 293 SVIRGFCYANDWNEAKRLFIE--------------------------------------- 313
           +V+ G C A    EA RLF +                                       
Sbjct: 252 TVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMF 311

Query: 314 --MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M ++ V PD  ++ +++D L K GK++ A  L + ++  GV P+T  Y +LI G C+ 
Sbjct: 312 EKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMA 371

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           +  D AR+LF  M   GC    V+YN +I+  CK   +EEA  L  +M+  G  P VVTY
Sbjct: 372 NSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY 431

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS---------GFVLEA 482
           NT+  GL +  +VE AL LF+EM R     +  ++N  I GLC+          G + EA
Sbjct: 432 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEA 491

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             L + + D  +  ++V+Y+ LI GL
Sbjct: 492 FRLLKRMTDDGHVPDVVTYSTLISGL 517



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 201/445 (45%), Gaps = 49/445 (11%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGL-FPDIYTHSILINCFCKMGRVSHGFVVLG 166
           S++NI+   L K    D  L L + ++   +        S+L+      GR+     V  
Sbjct: 146 SAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVG-LMDSGRIDEALQVYR 204

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
              R    P  VT   L++G C+  ++ +A  L        C PD  +Y T+++GLC+ G
Sbjct: 205 ENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAG 261

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ LF +    +        P+   YN +I GLC+   +D+A ++F KM + N++P
Sbjct: 262 RVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSP 321

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D  +Y  +I G   A   N+A+ LF +++  GV P  V ++ ++  LC     D A  L 
Sbjct: 322 DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 381

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG  P+  TYN +ID  C    ++ A  L   M  +G + DVV+YNT+++  CK+
Sbjct: 382 ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 441

Query: 407 KDVEEALSLYSEMLSKGIKPT--------------------------------------- 427
             VEEAL L++EM   G  P                                        
Sbjct: 442 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDD 501

Query: 428 -----VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
                VVTY+TL  GL  I +V+ A  L ++M +        T N  I GLCK+G + EA
Sbjct: 502 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 561

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
            E+  A+  S    ++V+YN L+ G
Sbjct: 562 REVLDAMVSSGQSPDVVTYNTLVHG 586



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 176/374 (47%), Gaps = 53/374 (14%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFT-KHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           P  + FTS+I+G C   R  EA  +F+      +  PDV  YN LI+ L +   T     
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKK 65

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT--- 290
           + + M +        C P++ T+ TI+ GLCK G +D+A+ +  +M+   I P   T   
Sbjct: 66  MVQVMVDRG------CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 291 ----------------------------YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
                                       Y  V+   C A   ++A  L   M ++ +   
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKL 380
             +   ++  L  +G++D+A     L ++R     P   T N L++G+C   ++D AR+L
Sbjct: 180 AGSLDSVLVGLMDSGRIDEA-----LQVYRENRREPCLVTLNVLLEGFCSRGQVDKAREL 234

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE------MLSKGIKPTVVTYNTL 434
             +M    C  D VSY T+++  CK   VEEA+ L+ +        S    P++  YN +
Sbjct: 235 LRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIV 294

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            LGL +  +++ A+++F++M   +V+ D+++Y   IDGL K+G + +A  LF+ +  S  
Sbjct: 295 ILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGV 354

Query: 495 ELNIVSYNCLIDGL 508
             + V+Y  LI GL
Sbjct: 355 TPSTVAYTSLIHGL 368



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 35/261 (13%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  + I P  + +TSVI+G+C      EA ++F  +M++   P    ++V++D L K  +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES------------ 386
            +   +++++M+ RG  P+++T+ T++ G C   K+D A  +   M S            
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 387 -------NGCMH------------DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                   G M             +  +YN ++   CK   V++AL L   M  K I   
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             + +++ +GL +  +++ AL+++ E RR        T N  ++G C  G V +A EL R
Sbjct: 180 AGSLDSVLVGLMDSGRIDEALQVYRENRREPC---LVTLNVLLEGFCSRGQVDKARELLR 236

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           A+ D +   + VSY  ++DGL
Sbjct: 237 AMPDEECAPDEVSYCTVLDGL 257


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 214/404 (52%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L+ +    +    F  + S G+ P++YT++IL+   C  G       +
Sbjct: 154 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PN VT+ +L+        +  A  L    R    +P++ T+N+++NG+C+
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +F+EM            P+ V+YNT++ G CK G   +A  +F +M  + I
Sbjct: 273 AGKMEDARKVFDEMVREG------LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVT+TS+I   C A +   A  L  +M ++G+Q + VTF+ ++D  CK G +D A  
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +  M    + P+   YN LI+GYC+  ++D AR+L   ME+ G   DVV+Y+T+I+ YC
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN D   A  L  +ML KG+ P  +TY++L   L    ++  A  LF  M +  +  D +
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + IDG CK G V  AL L   +  +    ++V+Y+ LI+GL
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 221/458 (48%), Gaps = 45/458 (9%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD ML      P V ++NIL   L    H    LS+ + +  AG  P++ T++ L+  F 
Sbjct: 178 FDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 236

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G V     ++G +      PN VTF S++ G+C   ++ +A  +F +       PD  
Sbjct: 237 RAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV 296

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMAN--------------------GNGEFGVVC---- 249
           +YNTL+ G C+ G +  AL++F EM                      GN E  V      
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM 356

Query: 250 -----KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                + N VT+  +IDG CK+GF+D A      MK   I P VV Y ++I G+C     
Sbjct: 357 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRM 416

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           +EA+ L  EM  +G++PDVVT+S I+   CKN     A  L + M+ +GV P+  TY++L
Sbjct: 417 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 476

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I   C   ++  A  LF +M   G   D  +Y +LI+ +CK  +VE ALSL+ +M+  G+
Sbjct: 477 IRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKL---------------FDEMRRNHVAADTYTYNNF 469
            P VVTY+ L  GL +  +   A +L               +D +      A+  +    
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL 596

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C  G + EA ++++++ D  + L+   Y+ LI G
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 634



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 200/427 (46%), Gaps = 21/427 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R     P + +FN +   + K    +    +F  +   GL PD  +++ L+  +CK G
Sbjct: 250 MMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAG 309

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
                  V   + +    P+ VTFTSLI  +C    +  A  L  + R    + +  T+ 
Sbjct: 310 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFT 369

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LI+G C+ G    AL     M           KP+ V YN +I+G C  G +D+A+EL 
Sbjct: 370 ALIDGFCKKGFLDDALLAVRGMKQCR------IKPSVVCYNALINGYCMVGRMDEARELL 423

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M+ + + PDVVTY+++I  +C   D + A  L  +M+++GV PD +T+S ++  LC  
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGE 483

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            ++  A  L + MI  G+ P+ +TY +LIDG+C    ++ A  L   M   G + DVV+Y
Sbjct: 484 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTY 543

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF-----------LGLFE----I 441
           + LIN   K+    EA  L  ++  +   P    Y+ L            L L +     
Sbjct: 544 SVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             +  A K++  M   +   D   Y+  I G C++G V++AL   + +    +  N  S 
Sbjct: 604 GLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTST 663

Query: 502 NCLIDGL 508
             LI GL
Sbjct: 664 ISLIRGL 670



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 197/452 (43%), Gaps = 59/452 (13%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD M+R   +P  VS +N L G   K       LS+F  +   G+ PD+ T + L
Sbjct: 278 DARKVFDEMVREGLAPDGVS-YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G +     ++ ++       N VTFT+LI G C +  + +A       +    
Sbjct: 337 IHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRI 396

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +P V  YN LING C  G    A  L  EM A G        KP+ VTY+TII   CK  
Sbjct: 397 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKG-------LKPDVVTYSTIISAYCKNC 449

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A EL  +M ++ + PD +TY+S+IR  C     ++A  LF  M+  G+QPD  T++
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG-------------------- 367
            ++D  CK G ++ A  L + M+  GV P+  TY+ LI+G                    
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569

Query: 368 ------------------------------YCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
                                         +C+   ++ A K++ SM       D   Y+
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            LI+ +C+  +V +ALS + +ML  G  P   +  +L  GLFE   V  A ++  ++   
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
              AD       ID     G V   L++   +
Sbjct: 690 CSLADAEASKALIDLNLNEGNVDAVLDVLHGM 721



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 159/338 (47%), Gaps = 21/338 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L          D    L   + + GL PD+ T+S +I+ +CK       F +
Sbjct: 398 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 457

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L     P+A+T++SLI+ LC E R+ +A  LF        +PD FTY +LI+G C+
Sbjct: 458 NQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 517

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL+L ++M       GV+  P+ VTY+ +I+GL K     +A++L  K+  E+ 
Sbjct: 518 EGNVESALSLHDKMVKA----GVL--PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 285 NPDVVTYTSV---------------IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            P    Y ++               ++GFC     NEA +++  M+D+    D   +SV+
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 631

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C+ G + KA    + M+  G  PN+ +  +LI G      +  A ++   + +   
Sbjct: 632 IHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCS 691

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           + D  +   LI+      +V+  L +   M   G+ P+
Sbjct: 692 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P+V+ YN + L L +   +  A + FD M  + VA + YTYN  +  LC  G   EA
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
           L + R +R +    N+V+YN L+
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLV 232


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 226/452 (50%), Gaps = 39/452 (8%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D MLR     P V ++ +L   + KN  ++  +++   + + G  P+I T++++
Sbjct: 160 DALSLLDDMLR-RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 218

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C+ GRV     +L R+      P+ V++T+L+KGLCA  R  +   LF +     C
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 278

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T++ LI   CR G    A+ + ++M          C  NT   N +I+ +CK+G 
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE------CATNTTLCNIVINSICKQGR 332

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A +    M     NPD ++YT+V++G C A  WN+AK L  EM+     P+ VTF+ 
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392

Query: 329 IMDELCKNGKMDKASRLLELMIWRG--------------------------------VNP 356
            +  LC+ G +++A  L+E M   G                                  P
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 452

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           NT TY TL+ G C  +++D A +L   M    C  +VV++N L+N++C+   ++EA+ L 
Sbjct: 453 NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELV 512

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            +M+  G  P ++TYNTLF G+ +    E AL+L   +    V+ D  T+++ I  L K 
Sbjct: 513 EQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 572

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             V EA+++F   +D       + YN ++ GL
Sbjct: 573 DRVEEAIQMFHLAQDIGMRPKALVYNKILLGL 604



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 212/441 (48%), Gaps = 47/441 (10%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP  V ++N L     +  H D    L   + S  + PD YT++ LI   C  GRV+   
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADAL 162

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  +LR    PN VT+T L++ +C  S   +A A+  + R   C P++ TYN +ING+
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A +L   +      F   C+P+TV+Y T++ GLC     D  +ELF +M ++
Sbjct: 223 CREGRVDDARDLLNRL------FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 276

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N  P+ VT+  +IR FC       A ++  +M +     +    +++++ +CK G++D A
Sbjct: 277 NCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA 336

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDK----------------------------- 373
            + L  M   G NP+T +Y T++ G C  ++                             
Sbjct: 337 FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICI 396

Query: 374 ------IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                 I+ A  L   M+ +GC   VV+YN L+N +C    ++ AL L+  M     KP 
Sbjct: 397 LCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPN 453

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            +TY TL  GL    +++ A +L  EM       +  T+N  ++  C+ GF+ EA+EL  
Sbjct: 454 TITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVE 513

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +     N+++YN L DG+
Sbjct: 514 QMMEHGCTPNLITYNTLFDGI 534



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 203/381 (53%), Gaps = 14/381 (3%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           + +    +G   D++ ++ L+  +C+ G +     ++G +      P+A T+T LI+ LC
Sbjct: 97  VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLC 153

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGV 247
              R+ +A +L        C+P+V TY  L+  +C+      A+ + +EM A G      
Sbjct: 154 DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG------ 207

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C PN VTYN II+G+C+EG VD A++L  ++      PD V+YT++++G C +  W++ 
Sbjct: 208 -CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDV 266

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           + LF EMM++   P+ VTF +++   C+ G +++A ++L+ M       NT   N +I+ 
Sbjct: 267 EELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINS 326

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   ++D A K   +M S GC  D +SY T++   C+ +   +A  L  EM+     P 
Sbjct: 327 ICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPN 386

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            VT+NT    L +   +E+A+ L ++M+ +       TYN  ++G C  G +  ALELFR
Sbjct: 387 EVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 446

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           ++     + N ++Y  L+ GL
Sbjct: 447 SM---PCKPNTITYTTLLTGL 464



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 208/425 (48%), Gaps = 18/425 (4%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C S    D+  +        F  M+  +  P  V+ F++L     +  
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEEL--------FAEMMEKNCMPNEVT-FDMLIRFFCRGG 296

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             +  + + +++       +    +I+IN  CK GRV   F  L  +      P+ +++T
Sbjct: 297 MVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYT 356

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC   R  +A  L  +     C P+  T+NT I  LC+ G    A+ L E+M   
Sbjct: 357 TVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ-- 414

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             E G  C    VTYN +++G C +G +D A ELF  M      P+ +TYT+++ G C A
Sbjct: 415 --EHG--CTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNA 467

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              + A  L  EM+ +   P+VVTF+V+++  C+ G +D+A  L+E M+  G  PN  TY
Sbjct: 468 ERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITY 527

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           NTL DG       + A +L   + S G   DV++++++I    K   VEEA+ ++     
Sbjct: 528 NTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQD 587

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G++P  + YN + LGL + H+++ A+     M  N    +  TY   I+GL + G + E
Sbjct: 588 IGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKE 647

Query: 482 ALELF 486
           A +L 
Sbjct: 648 AQDLL 652



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 158/349 (45%), Gaps = 44/349 (12%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI+   + K    D        + S G  PD  +++ ++   C+  R +    +L  ++R
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR 380

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
           +   PN VTF + I  LC +  I +A  L  + +   C   V TYN L+NG C  GH   
Sbjct: 381 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS 440

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF  M          CKPNT+TY T++ GLC    +D A EL  +M   +  P+VVT
Sbjct: 441 ALELFRSMP---------CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVT 491

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMD---------------------------------- 316
           +  ++  FC     +EA  L  +MM+                                  
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLV 551

Query: 317 -QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +GV PDV+TFS I+  L K  ++++A ++  L    G+ P    YN ++ G C   +ID
Sbjct: 552 SKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEID 611

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +A      M SNGCM +  +Y  LI    +   ++EA  L S + S+G+
Sbjct: 612 NAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 6/227 (2%)

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLF-IEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           N+ P+    ++ +R      D   A RL  +     G  PDV   + ++  LC+ G+   
Sbjct: 36  NVAPN--PASARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSD 93

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A+R+L      G   + + YNTL+ GYC    +D AR+L  SM       D  +Y  LI 
Sbjct: 94  AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV---APDAYTYTPLIR 150

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C    V +ALSL  +ML +G +P VVTY  L   + +    E+A+ + DEMR      
Sbjct: 151 VLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTP 210

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TYN  I+G+C+ G V +A +L   +     + + VSY  L+ GL
Sbjct: 211 NIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 209/375 (55%), Gaps = 9/375 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M R    P  VS F+ L G LA+N H    L  F+ +  +G+ PD   ++IL
Sbjct: 380 EAQEIFDEMSRRGVLPDLVS-FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 149 INCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           I+ FC+ G +S    +   +L R CF  + VT+ + + GLC +    +A  LF +     
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD +T+ TLI G C+ G+   ALNLFE M   N       KP+ VTYNT+IDG CK G
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN------LKPDKVTYNTLIDGFCKAG 551

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +AKEL+  M  ++I PD ++Y +V+ GFC +    EA  L  +M+++G++P++VT +
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C++G M KA   L  MI  G+ P++++YNTLIDGY     ++ A  L   ME  
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   ++++YN ++N +C    ++EA  +  +M+  GI P   TY++L  G      ++ A
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 448 LKLFDEMRRNHVAAD 462
            +  DEM +  +  D
Sbjct: 732 FRFHDEMLQRGLVPD 746



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 223/440 (50%), Gaps = 49/440 (11%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV--- 163
           V + NI+   L K++ ++ V+     +   G+F DI T++ LIN +C+ G V   F    
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 164 --------------------------------VLGRILRSCFTPNAVTFTSLIKGLCAES 191
                                           VL  +L+   TPNA T+ +L+  +C   
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
            I+EA  +F +       PD+ ++++LI  L R GH   AL  F EM       G+V  P
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--P 430

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----DVVTYTSVIRGFCYANDWNEA 307
           + V Y  +IDG C+ G +  A    LKM+DE +      DVVTY + + G C    + +A
Sbjct: 431 DNVIYTILIDGFCRNGALSDA----LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             LF EM+++G+ PD  TF+ ++   CK+G MDKA  L E M+   + P+  TYNTLIDG
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +C   ++  A++L+  M     + D +SY T++N +C +  + EAL+L  +ML KGI+P 
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +VT NTL  G      + +A +   +M  N +  D+++YN  IDG  K   + +A  L  
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +     + NI++YN +++G
Sbjct: 667 EMEKRGLQFNIITYNLILNG 686



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 209/411 (50%), Gaps = 6/411 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +LR       +++ N L G L +    D    ++  +   G+  ++YT +I++N  CK  
Sbjct: 212 ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDR 271

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +  +    L  +       + VT+ +LI   C E  + EA  L         EP + TYN
Sbjct: 272 KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYN 331

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            ++ GLC+ G    A ++  EM     + G+   PN  TYNT++  +C+   + +A+E+F
Sbjct: 332 AILYGLCKIGKYDRAKDVLIEML----QLGLT--PNAATYNTLLVEICRRDNILEAQEIF 385

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M    + PD+V+++S+I          +A   F EM   G+ PD V +++++D  C+N
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +  A ++ + M+ RG   +  TYNT ++G C       A  LF  M   G + D  ++
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            TLI  YCK+ ++++AL+L+  M+   +KP  VTYNTL  G  +  ++ RA +L+D+M R
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +  D  +Y   ++G C SG + EAL L   + +     N+V+ N LI G
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 8/346 (2%)

Query: 164 VLGRILRSCFTPNAV--TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           V+  ++ +CF   +V   +  L++      ++ E +  F   R       +   N L+ G
Sbjct: 172 VVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGG 231

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           L RTG   +A  ++ E+  G  E       N  T N +++ LCK+   +        M+ 
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIEL------NVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + +  D+VTY ++I  +C      EA +L      +G++P ++T++ I+  LCK GK D+
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +L  M+  G+ PN  TYNTL+   C  D I  A+++F  M   G + D+VS+++LI 
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              +N  + +AL  + EM   GI P  V Y  L  G      +  ALK+ DEM       
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TYN F++GLCK     +A  LF  + +     +  ++  LI G
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%)

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y+ L+  Y    K+    + F  +   G    + + N L+    +   V+ A  +Y E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             GI+  V T N +   L +  + E  +    +M    V AD  TYN  I+  C+ G V 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA +L  +      E  +++YN ++ GL
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGL 337


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 209/375 (55%), Gaps = 9/375 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M R    P  VS F+ L G LA+N H    L  F+ +  +G+ PD   ++IL
Sbjct: 380 EAQEIFDEMSRRGVLPDLVS-FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 149 INCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           I+ FC+ G +S    +   +L R CF  + VT+ + + GLC +    +A  LF +     
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD +T+ TLI G C+ G+   ALNLFE M   N       KP+ VTYNT+IDG CK G
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN------LKPDKVTYNTLIDGFCKAG 551

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +AKEL+  M  ++I PD ++Y +V+ GFC +    EA  L  +M+++G++P++VT +
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C++G M KA   L  MI  G+ P++++YNTLIDGY     ++ A  L   ME  
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   ++++YN ++N +C    ++EA  +  +M+  GI P   TY++L  G      ++ A
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 448 LKLFDEMRRNHVAAD 462
            +  DEM +  +  D
Sbjct: 732 FRFHDEMLQRGLVPD 746



 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 223/440 (50%), Gaps = 49/440 (11%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV--- 163
           V + NI+   L K++ ++ V+     +   G+F DI T++ LIN +C+ G V   F    
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 164 --------------------------------VLGRILRSCFTPNAVTFTSLIKGLCAES 191
                                           VL  +L+   TPNA T+ +L+  +C   
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
            I+EA  +F +       PD+ ++++LI  L R GH   AL  F EM       G+V  P
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--P 430

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----DVVTYTSVIRGFCYANDWNEA 307
           + V Y  +IDG C+ G +  A    LKM+DE +      DVVTY + + G C    + +A
Sbjct: 431 DNVIYTILIDGFCRNGALSDA----LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             LF EM+++G+ PD  TF+ ++   CK+G MDKA  L E M+   + P+  TYNTLIDG
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +C   ++  A++L+  M     + D +SY T++N +C +  + EAL+L  +ML KGI+P 
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +VT NTL  G      + +A +   +M  N +  D+++YN  IDG  K   + +A  L  
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +     + NI++YN +++G
Sbjct: 667 EMEKRGLQFNIITYNLILNG 686



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 209/411 (50%), Gaps = 6/411 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +LR       +++ N L G L +    D    ++  +   G+  ++YT +I++N  CK  
Sbjct: 212 ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDR 271

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +  +    L  +       + VT+ +LI   C E  + EA  L         EP + TYN
Sbjct: 272 KFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYN 331

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            ++ GLC+ G    A ++  EM     + G+   PN  TYNT++  +C+   + +A+E+F
Sbjct: 332 AILYGLCKIGKYDRAKDVLIEML----QLGLT--PNAATYNTLLVEICRRDNILEAQEIF 385

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M    + PD+V+++S+I          +A   F EM   G+ PD V +++++D  C+N
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +  A ++ + M+ RG   +  TYNT ++G C       A  LF  M   G + D  ++
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            TLI  YCK+ ++++AL+L+  M+   +KP  VTYNTL  G  +  ++ RA +L+D+M R
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +  D  +Y   ++G C SG + EAL L   + +     N+V+ N LI G
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 8/346 (2%)

Query: 164 VLGRILRSCFTPNAV--TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           V+  ++ +CF   +V   +  L++      ++ E +  F   R       +   N L+ G
Sbjct: 172 VVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGG 231

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           L RTG   +A  ++ E+  G  E       N  T N +++ LCK+   +        M+ 
Sbjct: 232 LVRTGWVDLAWEIYGEVVRGGIEL------NVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + +  D+VTY ++I  +C      EA +L      +G++P ++T++ I+  LCK GK D+
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +L  M+  G+ PN  TYNTL+   C  D I  A+++F  M   G + D+VS+++LI 
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              +N  + +AL  + EM   GI P  V Y  L  G      +  ALK+ DEM       
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TYN F++GLCK     +A  LF  + +     +  ++  LI G
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%)

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y+ L+  Y    K+    + F  +   G    + + N L+    +   V+ A  +Y E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             GI+  V T N +   L +  + E  +    +M    V AD  TYN  I+  C+ G V 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA +L  +      E  +++YN ++ GL
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGL 337


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 212/385 (55%), Gaps = 9/385 (2%)

Query: 126 VLSLFKRLNSAGLF---PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           VL +F+++N+ G F   P +  ++ ++    K   +     V   +L +  +PN  TF +
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           ++ G C    ++EA    +K       PD FTY +LI G CR      A  +F  M    
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                 C+ N V+Y  +I GLC+ G +++A +LF  M ++N  P V TYT +I     + 
Sbjct: 260 ------CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              EA  LF EM ++G +P+V T++V++D LCK  KMD+A ++L  M  +G+ P+  TYN
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LIDGYC    ID A ++   MESN C  +  +YN LI   CK + V +A++L ++ML +
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            + P+++TYN+L  G  +++ +E A +L   M  N +  D +TY+ FID LCK G V EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
             LF +++    + N V Y  LIDG
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDG 518



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/401 (34%), Positives = 206/401 (51%), Gaps = 7/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VS  N++ G L +    +  L LF  +      P + T+++LI      GR      +  
Sbjct: 265 VSYTNLIHG-LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN  T+T LI GLC E+++ EA  + ++       P V TYN LI+G C+ G
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEG 383

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  + + M + +      C PNT TYN +I GLCK+  V KA  L  KM +  ++P
Sbjct: 384 MIDDAFEILDLMESNS------CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            ++TY S+I G C  ND   A RL   M + G+ PD  T+SV +D LCK G++++A  L 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  +GV  N   Y  LIDGYC   KID A  L   M ++ C+ +  +YN LI   CK 
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K ++EA SL ++ML+ G+KPTVVTY  L   + +    + ALK+F+ M       D  TY
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             F+      G + E  ++   + +     ++V+Y  LIDG
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N +   L+K    D + +++  L +  + P+IYT + ++N +CK+G V    + 
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +I+++   P+  T+TSLI G C    +  A  +F       C+ +  +Y  LI+GLC 
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL LF +M   N      C P   TY  +I  L   G   +A  LF +MK++  
Sbjct: 277 AGRINEALKLFADMTEDN------CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V TYT +I G C  N  +EA+++  EM ++G+ P VVT++ ++D  CK G +D A  
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+LM      PNT TYN LI G C   K+  A  L   M        +++YN+LI+  C
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+E A  L S M   G+ P   TY+     L +  +VE A  LFD ++   V A+  
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   IDG CK G +  A  L   + +     N  +YN LI+GL
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 24/422 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++    L K    +   +LF  + + G+  +   ++ LI+ +CK+G++   + +
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+L     PN+ T+  LI+GLC E ++ EA++L  K      +P V TY  LI  + +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL +F  M +     G   +P+  TY   +     +G +++  ++  KM +E I
Sbjct: 592 DGAFDHALKVFNHMVS----LGY--QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK--- 341
            PD+VTYT +I G+      + A      M+D G +P +   S+++  L    +M +   
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705

Query: 342 ---------------ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
                          A +L E M+  G   +   Y  LI G+C  ++++ A+ L   M+ 
Sbjct: 706 EIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 765

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G       YN+L++  CK     EA+ L   M+  G+ P + +Y  L  GL+     E+
Sbjct: 766 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEK 825

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  +F  +       D   +   IDGL K   V E  EL   + +   + N ++Y+ LI+
Sbjct: 826 AKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885

Query: 507 GL 508
           GL
Sbjct: 886 GL 887



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 48/121 (39%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N L  C  K   Y   + L   +   GL P + ++ +L+      G       V
Sbjct: 770 PSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 829

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L   +  + V +  LI GL     + E + L        C+P+  TY+ LI GL R
Sbjct: 830 FHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889

Query: 225 T 225
           T
Sbjct: 890 T 890


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 219/430 (50%), Gaps = 38/430 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L   + K+  +   +++   + + G  P+I T++++IN  C+ GRV     +
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+    F P+ V++T+++KGLCA  R  +   LF +     C P+  T++ L+   CR
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ + ++M+         C PNT   N +I+ +CK+G VD A +    M     
Sbjct: 305 GGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPD ++YT+V+RG C A  W  AK L  EM+ +   P+ VTF+  +  LC+ G +++A +
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 345 LLELMIWRGVN--------------------------------PNTYTYNTLIDGYCLTD 372
           L+ELM   G +                                PNT TY TL+ G C  +
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAE 478

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           ++D A +L   M    C  + V++N L++++C+   VEEA+ L ++M+  G  P ++T+N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G+ +    E AL+L   +    V+ DT TY++ +D L +     EA+++  A++D 
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598

Query: 493 KYELNIVSYN 502
                +  YN
Sbjct: 599 GMRPKVGMYN 608



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 164/303 (54%), Gaps = 11/303 (3%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCK 265
            C+P V TY  L+  +C++     A+N+ +EM A G       C PN VTYN II+G+C+
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-------CTPNIVTYNVIINGMCR 234

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG VD AKE+  ++      PD+V+YT+V++G C A  W++ K LF EM+D+   P+ VT
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F +++   C+ G +++A ++L+ M   G  PNT   N +I+  C   ++D A     +M 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GC  D +SY T++   C+    E A  L  EM+ K   P  VT+NT    L +   +E
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A+KL + M     +    TYN  + G C  G V  ALELF  +     E N ++Y  L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLL 471

Query: 506 DGL 508
            GL
Sbjct: 472 TGL 474



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 235/558 (42%), Gaps = 97/558 (17%)

Query: 25  SSSFPHTRKPT----------SSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERC 74
           +SS P   +PT          S+ +E   +    ++ L+   + +V    +    L+  C
Sbjct: 142 ASSPPCPSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSV---VTYTVLLEAVC 198

Query: 75  KSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLN 134
           KSSG G        EA+ + D M R     P + ++N++   + +    D    +  RL+
Sbjct: 199 KSSGFG--------EAMNVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLS 249

Query: 135 SAGLFPDIYTHS-----------------------------------ILINCFCKMGRVS 159
           S G  PDI +++                                   +L+  FC+ G V 
Sbjct: 250 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               VL ++ +   TPN      +I  +C + R+ +A        ++ C PD  +Y T++
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369

Query: 220 NGLCRTGHTIVALNLFEEMANGN-------------------------------GEFGVV 248
            GLCR G    A  L  EM   N                                E+G  
Sbjct: 370 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG-- 427

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C    VTYN ++ G C +G VD A ELF  +  E   P+ +TYT+++ G C+A   + A 
Sbjct: 428 CSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAA 484

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM+ +    + VTF+V++   C+ G +++A  L+  M+  G  PN  T+NTL+DG 
Sbjct: 485 ELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGI 544

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
                 + A +L   + S G   D ++Y+++++   +    EEA+ +   +   G++P V
Sbjct: 545 TKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKV 604

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
             YN +   L +  + ++A+  F  M  N    +  TY   I+GL   G + EA    R 
Sbjct: 605 GMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA----RY 660

Query: 489 IRDSKYELNIVSYNCLID 506
           +    Y   ++S + L D
Sbjct: 661 VLSELYAKGVLSKSLLED 678



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 105/195 (53%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+ +G QP VVT++V+++ +CK+    +A  +L+ M  +G  PN  TYN +I+G C   +
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A+++   + S G   D+VSY T++   C  +  ++   L++EM+ K   P  VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L         VERA+++  +M ++    +T   N  I+ +CK G V +A +    +    
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 494 YELNIVSYNCLIDGL 508
              + +SY  ++ GL
Sbjct: 358 CNPDTISYTTVLRGL 372



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%)

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           S ML +G +P+VVTY  L   + +      A+ + DEMR      +  TYN  I+G+C+ 
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G V +A E+   +    ++ +IVSY  ++ GL
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 267


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 223/407 (54%), Gaps = 9/407 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHG 161
           P +  FN +   +AK + YD V++L+KR+ +A    + PD+YT +IL+NCFC+  + S  
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
              LG++++    P+ VT +SL+ G C  + I +A  +  +      + DV     LI+ 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC+    + AL + + M +          PN VTY+++I GLCK G +  A+    +M  
Sbjct: 128 LCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 181

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + INP+V+T++++I  +      ++   ++  M+   + P+V T+S ++  LC + ++D+
Sbjct: 182 KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 241

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A ++L+LMI +G  PN  TY+TL +G+  + ++D   KL   M   G   + VS NTLI 
Sbjct: 242 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 301

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            Y +   ++ AL ++  M S G+ P + +YN +  GLF   +VE+AL  F+ M++     
Sbjct: 302 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 361

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TY   I G+CK+  V EA +LF  ++  + E +  +Y  +I  L
Sbjct: 362 DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAEL 408


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 230/425 (54%), Gaps = 14/425 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NE+L    +++     P  V    ++ G L  +K  D  + +   L + G  PD+  ++ 
Sbjct: 74  NESLYFLRHLVNKGHKPDVVLCTKLIHG-LFTSKTIDKAIQVMHILENHG-HPDLIAYNA 131

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I  FC+  R+   + VL R+    F+P+ VT+  LI  LC  SR M  +AL  K+++  
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLC--SRGMLDSALEFKNQLLK 189

Query: 208 --CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C+P V TY  LI      G    A+ L +EM   N       +P+  TYN+II G+C+
Sbjct: 190 ENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN------LQPDMFTYNSIIRGMCR 243

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG+VD+A ++   +  +   PDV+TY  ++RG      W     L  +M+ +G + +VVT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +SV++  +C++GK+++   LL+ M  +G+ P+ Y Y+ LI   C   ++D A ++   M 
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S+GC+ D+V+YNT++   CK K  +EALS++ ++   G  P   +YN++F  L+      
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF--RAIRDSKYELNIVSYNC 503
           RAL +  EM    V  D  TYN+ I  LC+ G V EA+EL     +  S+ + ++VSYN 
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 504 LIDGL 508
           ++ GL
Sbjct: 484 VLLGL 488



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 191/412 (46%), Gaps = 31/412 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +     +    D+   +  R+ + G  PDI T++ILI   C  G +      
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L+    P  VT+T LI+    +  I EA  L  +      +PD+FTYN++I G+CR
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 225 TGHTIVALNLFEEMAN--------------------GNGEFGVV---------CKPNTVT 255
            G+   A  +   +++                    G  E G           C+ N VT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+ +I  +C++G V++   L   MK + + PD   Y  +I   C     + A  +   M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G  PD+V ++ I+  LCK  + D+A  + E +   G +PN  +YN++      T    
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY--SEMLSKGIKPTVVTYNT 433
            A  + + M   G   D ++YN+LI+  C++  V+EA+ L    EM S   KP+VV+YN 
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           + LGL ++ +V  A+++   M       +  TY   I+G+   G + +A +L
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 10/313 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L     ++    L   + + G   ++ T+S+LI+  C+ G+V  G  +
Sbjct: 264 PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGL 323

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +    P+   +  LI  LC E R+  A  +        C PD+  YNT++  LC+
Sbjct: 324 LKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCK 383

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++FE++    GE G  C PN  +YN++   L   G   +A  + L+M D+ +
Sbjct: 384 QKRADEALSIFEKL----GEVG--CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFI--EMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           +PD +TY S+I   C     +EA  L +  EM     +P VV++++++  LCK  ++  A
Sbjct: 438 DPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDA 497

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +L  M+ +G  PN  TY  LI+G      ++ AR L  ++ +   + +  S+  L   
Sbjct: 498 IEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE-HSFERLYKT 556

Query: 403 YCKNKDVEEALSL 415
           +CK  DV   L+L
Sbjct: 557 FCK-LDVYRQLNL 568


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 202/336 (60%), Gaps = 6/336 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           + PN +T  +LIKGLC + +I +A     K        D  +Y TLI+GLC+ G T  AL
Sbjct: 3   YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L + +       G + + N V YNT+I G+CK+  V+ A +L+ +M  + I+P+VVTY+
Sbjct: 63  DLLQRVD------GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 116

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I GF       +A  LF +++ + ++PD  TF++++D  CK+ KM +   +  +M+ +
Sbjct: 117 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 176

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  TYN+L+DGY L  +++ A+ +F +M   G   D+ SYN LIN +CK K V++A
Sbjct: 177 GIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 236

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           ++L++EM  K I P VVTYN+L  GL +  ++  AL+L D+M    V  +  TYN+ ID 
Sbjct: 237 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 296

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+  V +A+ L    +D   + ++ +Y  LIDGL
Sbjct: 297 LFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 332



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 183/350 (52%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N L   L              +L + G   D  ++  LI+  CK+G       +
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+       NAV + ++I G+C +  + +A  L+++       P+V TY+ LI+G   
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++LF ++   N       KP+  T+N ++DG CK+  + + K +F  M  + I
Sbjct: 125 VGKLKDAIDLFNKIILEN------IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 178

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S++ G+    + N AK +F  M   GV PD+ +++++++  CK  K+DKA  
Sbjct: 179 IPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  + + PN  TYN+LIDG   + +I +A +L   M   G   ++++YN++I+   
Sbjct: 239 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 298

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K   V++A++L ++   +GI+P++ TY  L  GL +  +++ A  +F+++
Sbjct: 299 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 104/190 (54%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P+ +T + ++  LC  G++ +A    + ++  G + +  +Y TLI G C   +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             L   ++      + V YNT+I   CK+K V +A  LYSEM+SKGI P VVTY+ L  G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
            F + +++ A+ LF+++   ++  D YT+N  +DG CK   + E   +F  +       +
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 498 IVSYNCLIDG 507
           +V+YN L+DG
Sbjct: 182 VVTYNSLVDG 191



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%)

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P  +T NTL  GL    Q+ +A    D++       D  +Y   I GLCK G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           L+L + +     +LN V YN +I G+
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGM 87



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 99  RMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +MH    PP + ++N +   L K    D  ++L  +    G+ P +YT++ILI+  CK G
Sbjct: 277 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGG 336

Query: 157 RV 158
           R+
Sbjct: 337 RL 338


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 134/387 (34%), Positives = 205/387 (52%), Gaps = 7/387 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
            S + IL  CL K  ++D    L   +           +S +IN  CK+ RV     ++ 
Sbjct: 45  ASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIE 104

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++ R    P+A+T+  +++ LC   RI +A A   +      +PD F YN +++GLC+  
Sbjct: 105 KMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEE 163

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  LFE+M            PN VTYNT+I+GLCK   ++ A ELF +M  +   P
Sbjct: 164 KVEEARLLFEKMVKQR------INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             V+Y ++I GFC   D   AK +F +M+     P+VVT++ ++D L K+GK+  A+ +L
Sbjct: 218 TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVL 277

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+ +GV PN  TY+ LIDG+C   ++D A KL   M + G    VV+YN L+N  C+ 
Sbjct: 278 DGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA 337

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +E+A  L+  M  +   PTVVTYNTL   L    Q++ A +L+ EM       D  TY
Sbjct: 338 DKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 397

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSK 493
           +    GL ++G V EA EL   ++ +K
Sbjct: 398 DTLAWGLTRAGKVHEAQELMEKMKLTK 424



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 176/332 (53%), Gaps = 8/332 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + + M R   +PP   ++  +   L K K  D  L+  + + + G+ PD + ++ 
Sbjct: 97  EEARELIEKMARY--APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  C+  +V    ++  ++++    PN VT+ +LI GLC   RI  A  LF +     
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   +YNTLI+G C+    + A ++F++M   N      C PN VTY T+IDGL K G
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSG 268

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+   M  + + P+V TY+ +I GFC     +EA +L  +M+ QG+ P VVT++
Sbjct: 269 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 328

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LC+  K++ A +L   M  R  +P   TYNTL+   C   ++D A +L+  M + 
Sbjct: 329 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 388

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           GC  D ++Y+TL     +   V EA  L  +M
Sbjct: 389 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 186/371 (50%), Gaps = 7/371 (1%)

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           + P   T + + + F K GR+     V   ++ + +T  A  +  LI  LC      EA 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            L    R+   +     Y+T+IN LC+      A  L E+MA           P+ +TY 
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-------YAPPDALTYG 118

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            I++ LCK   +D A     +M    I PD   Y  V+ G C      EA+ LF +M+ Q
Sbjct: 119 PIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            + P+VVT++ +++ LCK  +++ A  L + M  +G  P   +YNTLIDG+C    +  A
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           + +F  M  + C+ +VV+Y TLI+   K+  V+ A  +   M+ KG+ P V TY+ L  G
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDG 298

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             ++ +V+ A KL ++M    +A    TYN  ++ LC++  + +A +LFR +   +    
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPT 358

Query: 498 IVSYNCLIDGL 508
           +V+YN L+  L
Sbjct: 359 VVTYNTLLRAL 369



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 7/269 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +F+ M++   +P  V ++N L   L K    +T   LFK +   G  P   +++ 
Sbjct: 166 EEARLLFEKMVKQRINPN-VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 224

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK   +     V  +++RS   PN VT+T+LI GL    ++  AA +        
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY+ LI+G C+      A  L E+M       G+   P  VTYN +++ LC+  
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ----GIA--PTVVTYNILLNSLCRAD 338

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A +LF  M     +P VVTY +++R  C+    + A RL+ EM+ +G  PD +T+ 
Sbjct: 339 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNP 356
            +   L + GK+ +A  L+E M     NP
Sbjct: 399 TLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 94/228 (41%), Gaps = 69/228 (30%)

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-------------CMHDV-- 393
           M  R V P   T+NT+ DG+    +++  ++++  M   G             C+  V  
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 394 --------------------VSYNTLINW------------------------------- 402
                               ++Y+T+INW                               
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120

Query: 403 ---YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
               CK K +++AL+   EM ++GIKP    YN +  GL +  +VE A  LF++M +  +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +  TYN  I+GLCK+  +  A ELF+ +    Y    VSYN LIDG
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 228


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 222/433 (51%), Gaps = 35/433 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L KN   D    LF  +++ G  PD  T++ +++  CK G++     +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            GR     F P+   + +LI G+C E RI  A  L  +      +P+V +Y+ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 225 TGHTIVALNLFEEM------ANGNGEFGVV-----------------------CKPNTVT 255
           +G+  +A  LF +M      AN +    ++                       C+PN V 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I GLC  G +++A ++  +M+     P+V TY+ +I GF  + D   A   +  M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G +P+VVT++ ++D LCKN   D+A+ L+E M   G  PNT T+NT I G C   +++
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL   M+ +GC+ ++ +YN L++   +    EEA  L+ E+ ++ ++P +VTYNT+ 
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK-Y 494
            G      +  AL+LF +      A D+ TYN  I   CK G V  A +L   +   K +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 495 ELNIVSYNCLIDG 507
             +I++Y  LI G
Sbjct: 592 HPDIITYTSLIWG 604



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 218/422 (51%), Gaps = 12/422 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +  +AL +F Y +      P V  +N L   L     +  +  L+  +   GL P+++T+
Sbjct: 124 SAEQALKMF-YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +IL+   CK  RV     +   +      P+AVT+T+++  LC   +I +A  L  + + 
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK- 241

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P V  YN LI+G+C+ G   VA+ L  EM + NG       PN V+Y+ II+ LC 
Sbjct: 242 ----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMD-NG-----VDPNVVSYSCIINSLCV 291

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G V+ A  LF +M     + ++ T+T +I+G        EA  L+  M+  G +P+VV 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LC NG +++A ++ + M   G  PN  TY+ LIDG+  +  +  A + +  M 
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S+GC  +VV+Y  +++  CKN   ++A SL  +M  +G  P  +T+NT   GL    +VE
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+KL + M+ +    +  TYN  +D L +     EA  LF+ I     + N+V+YN ++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 506 DG 507
            G
Sbjct: 532 YG 533



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 197/385 (51%), Gaps = 11/385 (2%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           +  L +F R+   G  P +  ++ L++      +      +   + +    PN  T+  L
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           +K LC   R+  A  LF +     C PD  TY T+++ LC+ G    A     E+A   G
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELA---G 238

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
            F    KP+   YN +IDG+CKEG ++ A +L  +M D  ++P+VV+Y+ +I   C + +
Sbjct: 239 RF----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
              A  LF +M  +G   ++ TF+ ++      GK+ +A  L +LMI  G  PN   YNT
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G C    ++ A ++   M+ +GC+ +V +Y+ LI+ + K+ D+  A   ++ M+S G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P VVTY  +   L +    ++A  L ++M       +T T+N FI GLC +G V  A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +L   ++      NI +YN L+D L
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDAL 499



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 183/403 (45%), Gaps = 44/403 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   + K    +  + L   +   G+ P++ ++S +IN  C  G V   F +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             ++ LR C   N  TFT LIKG     ++ EA  L+       CEP+V  YNTLI+GLC
Sbjct: 302 FAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    AL + ++M          C PN  TY+ +IDG  K G +  A E + +M    
Sbjct: 361 SNGSLEEALQVCDQMQRSG------CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+VVTYT ++   C  + +++A  L  +M  +G  P+ +TF+  +  LC NG+++ A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN---------------- 387
           +LLE M   G  PN  TYN L+D     +K + A  LF  +E+                 
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 388 -------------------GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS-KGIKPT 427
                              G   D ++YNT+I+ YCK   V+ A  L   + S K   P 
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           ++TY +L  G      +E A+   D+     +  +  T+N  +
Sbjct: 595 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 8/346 (2%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++ GC  + K Y+  L L+K +   G  P++  ++ LI+  C  G +     V  ++ RS
Sbjct: 320 LIKGCFMRGKLYEA-LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRS 378

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              PN  T++ LI G      ++ A+  + +     C P+V TY  +++ LC+      A
Sbjct: 379 GCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQA 438

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            +L E+M          C PNT+T+NT I GLC  G V+ A +L  +M+     P++ TY
Sbjct: 439 NSLVEKMTLEG------CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
             ++      N + EA  LF E+  + +QP++VT++ ++    + G M +A +L    + 
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINWYCKNKDVE 410
           RG  P++ TYNT+I  YC   K+  A +L   + S    H D+++Y +LI   C   ++E
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           EA++   + +++GI P   T+N L    F+       + + D++ R
Sbjct: 613 EAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILR 658



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 35/307 (11%)

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L  F  +AN N       +    TY  +I+ L +E  +D  + +  +MK + IN     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
             +I G+       +A ++F  + + G +P V  ++ ++D L    K    + L   M  
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS---------------- 395
            G+ PN +TYN L+   C  D++D A KLFV M + GC  D V+                
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 396 --------------YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
                         YN LI+  CK   +E A+ L  EM+  G+ P VV+Y+ +   L   
Sbjct: 233 ARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             VE A  LF +M      A+ +T+   I G    G + EAL+L++ +     E N+V+Y
Sbjct: 293 GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAY 352

Query: 502 NCLIDGL 508
           N LI GL
Sbjct: 353 NTLIHGL 359



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 9/232 (3%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V ++  +   L KN  +D   SL +++   G  P+  T +  I   C  GRV  
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L R+      PN  T+  L+  L   ++  EA  LF +      +P++ TYNT++ 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 221 GLCRTGHTIVALNLF-EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           G  R G    AL LF + +  G         P+++TYNT+I   CK+G V  A +L  ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTA-------PDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 280 KD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
              +  +PD++TYTS+I G C   +  EA     + ++QG+ P+  T++ ++
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 225/401 (56%), Gaps = 7/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V++FN +   L +        +L  ++   G+  + +T +I I   C+ GR+     +
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + R + +   P+ VT+ +L++GLC +S++ EAA    +     C PD FTYNT+I+G C+
Sbjct: 269 VER-MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  L ++        G V  P+ VTY ++I+GLC EG +++A ELF + + +++
Sbjct: 328 SGMLQEATELLKDAVFK----GFV--PDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+V Y S+++G C       A ++  EM+++G  PD+ T+++I++ LCK G +  A+ 
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++   I +G  P+ +T+NTLIDGYC   K+D A +L   M + G   DV++YN+++N  C
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +E    + EM+ KG +P  +TYN L     +I+Q+E A  +   M ++ +  D  
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           ++N  I G C++G +  A  LF+ + +  Y     ++N LI
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 208/439 (47%), Gaps = 44/439 (10%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR------ 157
           PP   ++N +   L    ++D    ++ R+ +AG+ PD  TH++ +  FC  GR      
Sbjct: 103 PPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALR 162

Query: 158 ------------------------VSHGFVVLGRIL------RSCFTPNAVTFTSLIKGL 187
                                    +HG     R L      R  F P+  TF +++  L
Sbjct: 163 LLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF-PDVATFNNVLHAL 221

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C +  +ME+ AL  K        + FT N  I GLC  G    A+ L E M       G 
Sbjct: 222 CQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-------GA 274

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P+ VTYNT++ GLCK+  V +A +   +M ++   PD  TY ++I G+C +    EA
Sbjct: 275 YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L  + + +G  PD VT+  +++ LC  G +++A  L      + + P+   YN+L+ G
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C    I HA ++   M   GC  D+ +YN +IN  CK  ++ +A  + ++ + KG  P 
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPD 454

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V T+NTL  G  +  +++ AL+L + M    +A D  TYN+ ++GLCK+G   E  E F 
Sbjct: 455 VFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFE 514

Query: 488 AIRDSKYELNIVSYNCLID 506
            +       N ++YN LI+
Sbjct: 515 EMILKGCRPNAITYNILIE 533



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 201/411 (48%), Gaps = 29/411 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K+           R+ + G  PD +T++ +I+ +CK G +     +
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +   F P+ VT+ SLI GLCAE  I  A  LF + +    +PD+  YN+L+ GLCR
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397

Query: 225 TGHTIVALNLFEEMA---------------NGNGEFGVVCK--------------PNTVT 255
            G  + AL +  EM                NG  + G +                P+  T
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +NT+IDG CK   +D A +L  +M    I PDV+TY SV+ G C A    E    F EM+
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G +P+ +T++++++  CK  ++++AS ++  M   G+ P+  ++NTLI G+C    +D
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF  ++  G      ++N LI  Y    +++ A  ++ EM+SKG KP + TY  L 
Sbjct: 578 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILV 637

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            GL +   V+RA     EM          T+   ++ L  +  V EA+ + 
Sbjct: 638 DGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 199/407 (48%), Gaps = 42/407 (10%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI    L ++   +  ++L +R+  A + PD+ T++ L+   CK  +V      LGR++ 
Sbjct: 250 NIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+  T+ ++I G C    + EA  L          PD  TY +LINGLC  G    
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL LF E    +       KP+ V YN+++ GLC++G +  A ++  +M +E  +PD+ T
Sbjct: 369 ALELFNEAQAKD------LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWT 422

Query: 291 YTSVIRGFCYANDWNEA---------------------------KRLFIE--------MM 315
           Y  +I G C   + ++A                           KRL ++        M 
Sbjct: 423 YNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMW 482

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+ PDV+T++ +++ LCK GK  + +   E MI +G  PN  TYN LI+ +C  ++++
Sbjct: 483 TYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 542

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  + V M  +G + D VS+NTLI+ +C+N D++ A  L+ ++  KG   T  T+N L 
Sbjct: 543 EASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
                   ++ A K+F EM       D YTY   +DGLCK+  V  A
Sbjct: 603 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA 649



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 196/410 (47%), Gaps = 8/410 (1%)

Query: 99  RMHPSPPPVSSFNIL-FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           R H +P  +    +      A+       +  F+R++     P    ++ +++       
Sbjct: 62  RSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAY 121

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
                 V  R+L +   P+A T T  +K  C   R   A  L        C+     Y T
Sbjct: 122 HDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCT 181

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           ++ GL   GH   A +LF+EM       G    P+  T+N ++  LC++G V ++  L  
Sbjct: 182 VVRGLYAHGHGYNARHLFDEM------LGRDVFPDVATFNNVLHALCQKGDVMESGALLA 235

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           K+    ++ +  T    IRG C      EA  L +E M   V PDVVT++ +M  LCK+ 
Sbjct: 236 KVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL-VERMGAYVAPDVVTYNTLMRGLCKDS 294

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+ +A++ L  M+ +G  P+ +TYNT+IDGYC +  +  A +L       G + D V+Y 
Sbjct: 295 KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           +LIN  C   D+E AL L++E  +K +KP +V YN+L  GL     +  AL++ +EM   
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               D +TYN  I+GLCK G + +A  +        Y  ++ ++N LIDG
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 175/359 (48%), Gaps = 6/359 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L      +  L LF    +  L PD+  ++ L+   C+ G + H   V
Sbjct: 348 PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++     P+  T+  +I GLC    I +AA +     V    PDVFT+NTLI+G C+
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L E M      +G+   P+ +TYN++++GLCK G   +  E F +M  +  
Sbjct: 468 RLKLDSALQLVERMWT----YGIA--PDVITYNSVLNGLCKAGKAKEVNETFEEMILKGC 521

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +TY  +I  FC  N   EA  + + M   G+ PD V+F+ ++   C+NG +D A  
Sbjct: 522 RPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYL 581

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + +  +G +    T+N LI  Y     +  A K+F  M S G   D+ +Y  L++  C
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLC 641

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           K  +V+ A +  +EM+SKG  P++ T+  +   L   H+V  A+ +   M R  V  + 
Sbjct: 642 KAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 6/325 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L +       L +   +   G  PDI+T++I+IN  CKMG +S   VV
Sbjct: 383 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVV 442

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +   + P+  TF +LI G C   ++  A  L  +   +   PDV TYN+++NGLC+
Sbjct: 443 MNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G        FEEM          C+PN +TYN +I+  CK   +++A  + ++M  + +
Sbjct: 503 AGKAKEVNETFEEMILKG------CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD V++ ++I GFC   D + A  LF ++ ++G      TF++++        M  A +
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   MI +G  P+ YTY  L+DG C    +D A      M S G +  + ++  ++N   
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVV 429
            N  V EA+++   M+  G+ P VV
Sbjct: 677 MNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 175/402 (43%), Gaps = 80/402 (19%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT--YNTLINGLCRTGHTIVALNLFE 236
            + +LI+ L +  R+ +  A     R     PD     Y   I    R G    A++ FE
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
            M          C P    YN I+D L    + D+A +++++M    + PD  T+T  ++
Sbjct: 96  RMDL------FACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLK 149

Query: 297 GFC------------------------------------YANDWNEAKRLFIEMMDQGVQ 320
            FC                                    + + +N A+ LF EM+ + V 
Sbjct: 150 SFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYN-ARHLFDEMLGRDVF 208

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRG--------------------------- 353
           PDV TF+ ++  LC+ G + ++  LL  ++ RG                           
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268

Query: 354 -------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
                  V P+  TYNTL+ G C   K+  A +    M + GC+ D  +YNT+I+ YCK+
Sbjct: 269 VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             ++EA  L  + + KG  P  VTY +L  GL     +ERAL+LF+E +   +  D   Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N+ + GLC+ G +L AL++   + +     +I +YN +I+GL
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 230/437 (52%), Gaps = 27/437 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD++ R       V ++N     LAK          F+++   G  PD +T+SI++   
Sbjct: 24  LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKHRVFACEPD 211
           CK G +     +LG++  S    N +T++ +I G C  SR+ +A  +F T      C PD
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V T+N+L+ GLC       A  LFE MA         C+PN ++Y+T++DGLCK G +D+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKAGRLDE 197

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI-- 329
           A  L+ +M +++  PD+V YTS + G C AN   EA     +M+ +G + D V FS +  
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 330 ---------------MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
                          ++ LC++G +D+A +  E MI R   P+   +NTLI   C + ++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 375 DHARKLFVSMESNG---CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                LF  M+S     C  ++ +YN +++  CK K ++EA  L +EM + G+ P VVTY
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           + L  GL ++ +++RA  L +EM +  V  D++T  + ++ L K+G V  AL     ++ 
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 492 SKYELNIVSYNCLIDGL 508
                ++V+YN L+DGL
Sbjct: 438 RGSTPDLVTYNTLLDGL 454



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 219/470 (46%), Gaps = 52/470 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL IF  M       P V +FN L   L   +       LF+ +  AG  P++ ++S 
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR+     +   ++     P+ V +TS + GLC  +R+ EA     K     
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALN-----------------LFEEMANGN----GEF- 245
            + D   ++T+I  LC+ GH   A N                  FEEM + N     E  
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304

Query: 246 ---------------GVV------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
                          GV+            C PN  TYN ++D LCK   +D+A+EL  +
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M +  ++PDVVTY++++ G C     + A  L  EM  +GV PD  T + I++ L K GK
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D A   LE M  RG  P+  TYNTL+DG C   +ID A      M +  C  DV SY  
Sbjct: 425 VDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTI 484

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I   C++     A +++ EM+ +G+ P  V Y++L  GL      + AL+L   ++ + 
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSL 541

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              D   +   +DGLCK+G   +A E+   + D+ +  +  +Y  ++ GL
Sbjct: 542 CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGL 591



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 218/452 (48%), Gaps = 53/452 (11%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V +++++     K    D  L +FK ++S G   PD+ T + L+   C   R+S  FV+ 
Sbjct: 108 VITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLF 167

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
             + ++   PN +++++L+ GLC   R+ EA  L+ +    +C PD+  Y + + GLC+ 
Sbjct: 168 EYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKA 227

Query: 226 GHTIVALNLFEEMANGNGE---------FGVVCKPNTV--TYNTIIDGLCKEGFVDKAKE 274
                A +   +M     +          G++CK        N +I+ LC+ G +D+A +
Sbjct: 228 NRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACK 287

Query: 275 LFLKMKDEN--------------------------------------INPDVVTYTSVIR 296
            F +M   N                                        P++ TY  ++ 
Sbjct: 288 TFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVD 347

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
             C A   +EA+ L  EM + G+ PDVVT+S ++D LCK GK+D+A  LLE M   GV P
Sbjct: 348 NLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +++T  ++++      K+D+A     +M++ G   D+V+YNTL++  CK   ++EA++  
Sbjct: 408 DSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFL 467

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           ++M++    P V +Y  +   L    Q   A  +F EM +  V  DT  Y++ +DGL ++
Sbjct: 468 AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARN 527

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G    ALEL +    S  + + V +  ++DGL
Sbjct: 528 GLEDLALELLKT---SLCKPDFVMHKMVLDGL 556



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 173/349 (49%), Gaps = 12/349 (3%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI--LRSCF- 173
           L ++   D     F+ + S    P     + LI+  CK  R+  G ++  R+  ++  + 
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            PN  T+  ++  LC   ++ EA  L  +   +   PDV TY+ L++GLC+ G    A +
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L EEM+   G F     P++ T  +I++ L K G VD A      MK     PD+VTY +
Sbjct: 396 LLEEMSK-EGVF-----PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++ G C A   +EA     +M+     PDV ++++I+  LC++G+   A  + + M+ RG
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V P+T  Y++L+DG       D A +L   ++++ C  D V +  +++  CK    E+A 
Sbjct: 510 VLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDAC 566

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            +   M   G      TY ++  GL ++ +V++A +L D+    H + +
Sbjct: 567 EVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVE 615



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 52/333 (15%)

Query: 88  NEALCIFDYML-RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF---PDIY 143
           +EA   F+ M+ R HP  P    FN L   + K+K     + LF+R+ S   F   P++ 
Sbjct: 283 DEACKTFEEMISRNHP--PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--- 200
           T++I+++  CK  ++     ++  +     +P+ VT+++L+ GLC   ++  A  L    
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTI 259
           +K  VF   PD FT  +++N L + G    AL+  E M A G+        P+ VTYNT+
Sbjct: 401 SKEGVF---PDSFTDASILNALSKAGKVDYALSHLETMKARGS-------TPDLVTYNTL 450

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +DGLCK G +D+A     KM      PDV +YT +I   C +     A  +F EM+ +GV
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510

Query: 320 QPDVVTF--------------------------------SVIMDELCKNGKMDKASRLLE 347
            PD V +                                 +++D LCK GK + A  ++E
Sbjct: 511 LPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVE 570

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            M   G   + +TY +++ G     K+D AR+L
Sbjct: 571 RMADAGFPADAFTYISVVSGLRKLGKVDKARQL 603



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 9/243 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K    D    L + ++  G+FPD +T + ++N   K G+V +    
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     TP+ VT+ +L+ GLC   RI EA     K     C PDVF+Y  +I  LCR
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  +F+EM     + GV+  P+TV Y++++DGL + G  D A EL   +K    
Sbjct: 492 SGQAAGAHAIFQEMV----KRGVL--PDTVLYHSLLDGLARNGLEDLALEL---LKTSLC 542

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD V +  V+ G C A    +A  +   M D G   D  T+  ++  L K GK+DKA +
Sbjct: 543 KPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQ 602

Query: 345 LLE 347
           L++
Sbjct: 603 LVD 605


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 222/433 (51%), Gaps = 35/433 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L KN   D    LF  +++ G  PD  T++ +++  CK G++     +
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            GR     F P+   + +LI G+C E RI  A  L  +      +P+V +Y+ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 225 TGHTIVALNLFEEM------ANGNGEFGVV-----------------------CKPNTVT 255
           +G+  +A  LF +M      AN +    ++                       C+PN V 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I GLC  G +++A ++  +M+     P+V TY+ +I GF  + D   A   +  M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G +P+VVT++ ++D LCKN   D+A+ L+E M   G  PNT T+NT I G C   +++
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL   M+ +GC+ ++ +YN L++   +    EEA  L+ E+ ++ ++P +VTYNT+ 
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK-Y 494
            G      +  AL+LF +      A D+ TYN  I   CK G V  A +L   +   K +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 495 ELNIVSYNCLIDG 507
             +I++Y  LI G
Sbjct: 592 HPDIITYTSLIWG 604



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 218/422 (51%), Gaps = 12/422 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +  +AL +F Y +      P V  +N L   L     +  +  L+  +   GL P+++T+
Sbjct: 124 SAEQALKMF-YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +IL+   CK  RV     +   +      P+AVT+T+++  LC   +I +A  L  + + 
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK- 241

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P V  YN LI+G+C+ G   VA+ L  EM + NG       PN V+Y+ II+ LC 
Sbjct: 242 ----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMD-NG-----VDPNVVSYSCIINSLCV 291

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G V+ A  LF +M     + ++ T+T +I+G        EA  L+  M+  G +P+VV 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LC NG +++A ++ + M   G  PN  TY+ LIDG+  +  +  A + +  M 
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S+GC  +VV+Y  +++  CKN   ++A SL  +M  +G  P  +T+NT   GL    +VE
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+KL + M+ +    +  TYN  +D L +     EA  LF+ I     + N+V+YN ++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 506 DG 507
            G
Sbjct: 532 YG 533



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 197/385 (51%), Gaps = 11/385 (2%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           +  L +F R+   G  P +  ++ L++      +      +   + +    PN  T+  L
Sbjct: 126 EQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNIL 185

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           +K LC   R+  A  LF +     C PD  TY T+++ LC+ G    A     E+A   G
Sbjct: 186 LKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELA---G 238

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
            F    KP+   YN +IDG+CKEG ++ A +L  +M D  ++P+VV+Y+ +I   C + +
Sbjct: 239 RF----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
              A  LF +M  +G   ++ TF+ ++      GK+ +A  L +LMI  G  PN   YNT
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G C    ++ A ++   M+ +GC+ +V +Y+ LI+ + K+ D+  A   ++ M+S G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P VVTY  +   L +    ++A  L ++M       +T T+N FI GLC +G V  A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +L   ++      NI +YN L+D L
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDAL 499



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 183/403 (45%), Gaps = 44/403 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   + K    +  + L   +   G+ P++ ++S +IN  C  G V   F +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             ++ LR C   N  TFT LIKG     ++ EA  L+       CEP+V  YNTLI+GLC
Sbjct: 302 FAQMFLRGC-DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    AL + ++M          C PN  TY+ +IDG  K G +  A E + +M    
Sbjct: 361 SNGSLEEALQVCDQMQRSG------CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+VVTYT ++   C  + +++A  L  +M  +G  P+ +TF+  +  LC NG+++ A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN---------------- 387
           +LLE M   G  PN  TYN L+D     +K + A  LF  +E+                 
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 388 -------------------GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS-KGIKPT 427
                              G   D ++YNT+I+ YCK   V+ A  L   + S K   P 
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           ++TY +L  G      +E A+   D+     +  +  T+N  +
Sbjct: 595 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 175/346 (50%), Gaps = 8/346 (2%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++ GC  + K Y+  L L+K +   G  P++  ++ LI+  C  G +     V  ++ RS
Sbjct: 320 LIKGCFMRGKLYEA-LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRS 378

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              PN  T++ LI G      ++ A+  + +     C P+V TY  +++ LC+      A
Sbjct: 379 GCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQA 438

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            +L E+M          C PNT+T+NT I GLC  G V+ A +L  +M+     P++ TY
Sbjct: 439 NSLVEKMTLEG------CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
             ++      N + EA  LF E+  + +QP++VT++ ++    + G M +A +L    + 
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALV 552

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINWYCKNKDVE 410
           RG  P++ TYNT+I  YC   K+  A +L   + S    H D+++Y +LI   C   ++E
Sbjct: 553 RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           EA++   + +++GI P   T+N L    F+       + + D++ R
Sbjct: 613 EAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILR 658



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 35/307 (11%)

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L  F  +AN N       +    TY  +I+ L +E  +D  + +  +MK + IN     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
             +I G+       +A ++F  + + G +P V  ++ ++D L    K    + L   M  
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS---------------- 395
            G+ PN +TYN L+   C  D++D A KLFV M + GC  D V+                
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 396 --------------YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
                         YN LI+  CK   +E A+ L  EM+  G+ P VV+Y+ +   L   
Sbjct: 233 ARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             VE A  LF +M      A+ +T+   I G    G + EAL+L++ +     E N+V+Y
Sbjct: 293 GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAY 352

Query: 502 NCLIDGL 508
           N LI GL
Sbjct: 353 NTLIHGL 359



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 9/232 (3%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V ++  +   L KN  +D   SL +++   G  P+  T +  I   C  GRV  
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L R+      PN  T+  L+  L   ++  EA  LF +      +P++ TYNT++ 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 221 GLCRTGHTIVALNLF-EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           G  R G    AL LF + +  G         P+++TYNT+I   CK+G V  A +L  ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTA-------PDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 280 KD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
              +  +PD++TYTS+I G C   +  EA     + ++QG+ P+  T++ ++
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 228/421 (54%), Gaps = 16/421 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEAL + + M  M    P V +FN +++G    N+ ++    L  R+   G  P+  T+ 
Sbjct: 260 NEALKLLEEMFLMG-CLPDVDTFNDVIYGLCRLNRIHEGA-KLVDRMLFRGFTPNDITYG 317

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA-LFTKHRV 205
           +L+N  C++G+V    V+L ++     TPN V FT LI G     R+ EA A L+ K   
Sbjct: 318 VLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIK 373

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLC 264
             C PDVFT+NTLI+GLC+ G    A+++  +M ANG       C PN +TY T++DG C
Sbjct: 374 NGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG-------CTPNLITYTTLLDGFC 426

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K+  +++A  +  +M  +    +++ Y  ++R  C      +A  +  EM D+G +PD+ 
Sbjct: 427 KKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF+ ++  LCK  + + A  L   M+  GV  NT TYNTLI  +     I  A KL   M
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              GC  D ++YN LI  +CK    E+AL L+ EM+ K + P+ ++ N L  GL  + +V
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             AL+L  +M    +A D  TYN+ I+GLCK G + EA  LF  ++    + + ++YN L
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666

Query: 505 I 505
           I
Sbjct: 667 I 667



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/408 (33%), Positives = 217/408 (53%), Gaps = 9/408 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P    +  L   L+K    +  L L + +   G  PD+ T + +I   C++ R+  
Sbjct: 237 HGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHE 296

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           G  ++ R+L   FTPN +T+  L+ GLC   ++ EA  L  K       P+   +  LIN
Sbjct: 297 GAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNK----VPTPNDVHFTILIN 352

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G  ++G    A     +    NG     C+P+  T+NT+I GLCK+G +  A ++   M 
Sbjct: 353 GYVKSGRLDEANAFLYDKMIKNG-----CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
                P+++TYT+++ GFC  N   EA  +  EM  +G + +++ ++V++  LCKNGK+ 
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA  +L  M  +G  P+ +T+NTLI G C  D+ + A  L+  M  +G + + V+YNTLI
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           + + +   ++EAL L ++ML +G     +TYN L     ++   E+AL LFDEM R  + 
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               + N  I+GLC+ G V  ALEL R +       ++V+YN LI+GL
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGL 635



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 177/342 (51%), Gaps = 7/342 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D M++ +   P V +FN L   L K     + + +   +++ G  P++ T++ L++ F
Sbjct: 367 LYDKMIK-NGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF 425

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK  ++     VL  +    F  N + +  L++ LC   ++ +A  +  +     C+PD+
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDI 485

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FT+NTLI GLC+      AL L+ +M       GV+   NTVTYNT+I    + G + +A
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLD----GVI--ANTVTYNTLIHAFLRGGAIQEA 539

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L   M       D +TY  +I+ FC      +A  LF EM+ + + P  ++ +++++ 
Sbjct: 540 LKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLING 599

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC+ GK+  A  LL  MI RG+ P+  TYN+LI+G C    I  A  LF  +++ G   D
Sbjct: 600 LCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPD 659

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            ++YNTLI W+C+    ++A  L    +     P  VT+  L
Sbjct: 660 AITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYIL 701



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 139/296 (46%), Gaps = 40/296 (13%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND----- 303
           C+P   +YN ++D L        A  +F +M  + + P V T+  V++  C  N+     
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 304 ------------------------------WNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
                                          NEA +L  EM   G  PDV TF+ ++  L
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C+  ++ + ++L++ M++RG  PN  TY  L++G C   K+D A+ L   + +   +H  
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH-- 346

Query: 394 VSYNTLINWYCKNKDVEEALS-LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             +  LIN Y K+  ++EA + LY +M+  G +P V T+NTL  GL +   +  A+ + +
Sbjct: 347 --FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +M  N    +  TY   +DG CK   + EA  +   +    +ELNI+ YN L+  L
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRAL 460



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 33/270 (12%)

Query: 271 KAKELFLKMKDENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +A  + L MK      P   +Y  V+     AN  + A  +F EM+ +GV P V TF V+
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           M  LC   ++D A  LL  M   G  PN+  Y TLI      D+++ A KL   M   GC
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + DV ++N +I   C+   + E   L   ML +G  P  +TY  L  GL  + +V+ A  
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334

Query: 450 --------------------------------LFDEMRRNHVAADTYTYNNFIDGLCKSG 477
                                           L+D+M +N    D +T+N  I GLCK G
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  A+++   +  +    N+++Y  L+DG
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDG 424


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/411 (33%), Positives = 212/411 (51%), Gaps = 11/411 (2%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R+ P P    S N L   L+K    D     FK + +AG+   ++T++I+I+  CK G +
Sbjct: 215 RVFPKP---RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 271

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +  ++  + FTP+ VT+ SLI G      + E   +F + +   C+PDV TYN L
Sbjct: 272 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 331

Query: 219 INGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           IN  C+      A     EM ANG        KPN VTY+T ID  CKEG + +A + F+
Sbjct: 332 INCFCKFERMPKAFEFLHEMKANG-------LKPNVVTYSTFIDAFCKEGMLQEAIKFFV 384

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+   + P+  TYTS+I   C A +  EA +L  E++  G++ +VVT++ ++D LC+ G
Sbjct: 385 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 444

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +M +A  +   M+  GV PN  TY  L+ G+    ++++A+ +   M+      D++ Y 
Sbjct: 445 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 504

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           T++   C    +EEA  L  E+   GI    V Y TL    F+  Q   AL L +EM   
Sbjct: 505 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL 564

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + A   TY   IDGLCKSG V EA+  F  + +   + N+  Y  L+DGL
Sbjct: 565 GLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 208/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L     K    D  + +F+++  A   PD+ T++ LINCFCK  R+   F  
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PN VT+++ I   C E  + EA   F   R  A  P+ FTY +LI+  C+
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL L EE+           K N VTY  ++DGLC+EG + +A+E+F  M +  +
Sbjct: 408 AGNLAEALKLVEEILQAG------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 461

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TYT+++ GF  A +   AK +  EM ++ ++PD++ +  I+  LC   ++++A  
Sbjct: 462 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 521

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  +   G+N N   Y TL+D Y  + +   A  L   M   G +   V+Y  LI+  C
Sbjct: 522 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLC 581

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  V+EA+  +  M   G++P V  Y  L  GL + +  E A KLFDEM    +  D  
Sbjct: 582 KSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 641

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   IDG  K G + EAL L   + +   EL++ +Y  LI GL
Sbjct: 642 AYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 685



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 200/437 (45%), Gaps = 32/437 (7%)

Query: 78  GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           G G + L+  +E +CIF+ M +     P V ++N L  C  K +           + + G
Sbjct: 299 GHGKLGLL--DECICIFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           L P++ T+S  I+ FCK G +         + R   TPN  T+TSLI   C    + EA 
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN--------------- 242
            L  +      + +V TY  L++GLC  G    A  +F  M N                 
Sbjct: 416 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 475

Query: 243 -------------GEFGVVC-KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                         E    C KP+ + Y TI+ GLC E  +++AK L  ++K+  IN + 
Sbjct: 476 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT+++  +  +    EA  L  EM+D G+    VT+  ++D LCK+G + +A      
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGR 595

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ PN   Y  L+DG C  +  + A+KLF  M   G M D ++Y  LI+   K+ +
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++EAL+L   M+  G++  +  Y  L  GL    QV++A  L DEM    V  D   Y  
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715

Query: 469 FIDGLCKSGFVLEALEL 485
            I      G V EALEL
Sbjct: 716 LIKKYYALGKVDEALEL 732



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 6/318 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++  L   L +         +F+ + +AG+ P+  T++ L++ F K   + +   +L 
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +   C  P+ + + +++ GLC ESR+ EA  L  + +      +   Y TL++   ++G
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 549

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL L EEM +     G++     VTY  +IDGLCK G V +A   F +M +  + P
Sbjct: 550 QATEALTLLEEMLD----LGLI--ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQP 603

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +V  YT+++ G C  N +  AK+LF EM+D+G+ PD + ++ ++D   K+G + +A  L 
Sbjct: 604 NVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLR 663

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + MI  G+  + + Y  LI G   + ++  AR L   M   G + D V Y  LI  Y   
Sbjct: 664 DRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 723

Query: 407 KDVEEALSLYSEMLSKGI 424
             V+EAL L +EM  +G+
Sbjct: 724 GKVDEALELQNEMAKRGM 741



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 143/261 (54%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC P    ++ +   L + G +++A E FLKM+   + P   +  +++         + +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           ++ F +M   G++  V T+++++D LCK G ++ A  L   M   G  P+  TYN+LIDG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +     +D    +F  M+   C  DV++YN LIN +CK + + +A     EM + G+KP 
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY+T      +   ++ A+K F +MRR  +  + +TY + ID  CK+G + EAL+L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            I  +  +LN+V+Y  L+DGL
Sbjct: 420 EILQAGIKLNVVTYTALLDGL 440



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 25/232 (10%)

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-G 353
           +R       W++ +   + + D  + P  +  S ++ ELC++ ++  A R  E    R G
Sbjct: 74  VREIVREQRWDDFR--IVSLFDSALAP--IWASRVLVELCQDARL--ALRFFEWAKGRIG 127

Query: 354 VNPNTYTYNTLI----------DGYCLTDKIDHARKLFVSME--------SNGCMHDVVS 395
               +  Y  L+          D   +  ++   R++  S +         N C+     
Sbjct: 128 FQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGV 187

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           ++ L +   +   +EEA   + +M    + P   + N L   L ++ + + + K F +M 
Sbjct: 188 FDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMG 247

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +    +TYN  ID LCK G +  A  LF  ++++ +  +IV+YN LIDG
Sbjct: 248 AAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 209/402 (51%), Gaps = 20/402 (4%)

Query: 118 AKNKHYDTVLSLFKRLNSAG-----------LFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           A+     T  +L K+L+++G             PD+  ++ ++  +C  G++     ++ 
Sbjct: 91  ARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVA 150

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+A T+ +LI+GLC   R   A A+  +     C PDV TY  L+   C+  
Sbjct: 151 EMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ L +EM +        C P+ VTYN +++G+C+EG VD A E    +      P
Sbjct: 208 GYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 261

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + V+Y  V++G C A  W +A+ L  EM  +G  P+VVTF++++  LC+ G ++ A  +L
Sbjct: 262 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 321

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E +   G  PN+ +YN L+  +C   K+D A      M S GC  D+VSYNTL+   C++
Sbjct: 322 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 381

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            +V+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM    +  D  TY
Sbjct: 382 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 441

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    GLC+   + +A+  F  ++D     N V YN +I GL
Sbjct: 442 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 213/404 (52%), Gaps = 9/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +          D    L   +    + PD YT++ LI   C  GR ++   V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +LR    P+ VT+T L++  C  S   +A  L  + R   C PD+ TYN ++NG+C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+   + + +    +G  C+PNTV+YN ++ GLC     + A+EL  +M  +  
Sbjct: 241 EGRVDDAIEFLKNLPS----YG--CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVT+  +I   C       A  +  ++   G  P+ ++++ ++   CK  KMDKA  
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+LM+ RG  P+  +YNTL+   C + ++D A +L   ++  GC   ++SYNT+I+   
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 414

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EAL L +EM+SKG++P ++TY+T+  GL    ++E A++ F +++   +  +T 
Sbjct: 415 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 474

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  I GLCK      A++LF  +  +    N  +Y  LI+GL
Sbjct: 475 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 185/365 (50%), Gaps = 7/365 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D MLR     P V ++ IL     K   Y   + L   +   G  PDI T+++++
Sbjct: 177 ALAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 235

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  C+ GRV      L  +      PN V++  ++KGLC   R  +A  L  +     C 
Sbjct: 236 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 295

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V T+N LI+ LCR G    AL + E++     ++G  C PN+++YN ++   CK+  +
Sbjct: 296 PNVVTFNMLISFLCRKGLVEPALEVLEQIP----KYG--CTPNSLSYNPLLHAFCKQKKM 349

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DKA      M      PD+V+Y +++   C + + + A  L  ++ D+G  P +++++ +
Sbjct: 350 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 409

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GK  +A  LL  M+ +G+ P+  TY+T+  G C  D+I+ A + F  ++  G 
Sbjct: 410 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 469

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V YN +I   CK ++   A+ L++ M+  G  P   TY  L  GL     ++ A  
Sbjct: 470 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 529

Query: 450 LFDEM 454
           L DE+
Sbjct: 530 LLDEL 534


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 230/437 (52%), Gaps = 27/437 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD++ R       V ++N     LAK          F+++   G  PD +T+SI++   
Sbjct: 24  LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKHRVFACEPD 211
           CK G +     +LG++  S    N +T++ +I G C  SR+ +A  +F T      C PD
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V T+N+L+ GLC       A  LFE MA         C+PN ++Y+T++DGLCK G +D+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKAGRLDE 197

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI-- 329
           A  L+ +M +++  PD+V YTS + G C AN   EA     +M+ +G + D V FS +  
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 330 ---------------MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
                          ++ LC++G +D+A +  E MI R   P+   +NTLI   C + ++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 375 DHARKLFVSMESNG---CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                LF  M+S     C  ++ +YN +++  CK K ++EA  L +EM + G+ P VVTY
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           + L  GL ++ +++RA  L +EM +  V  D++T  + ++ L K+G V  AL     ++ 
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 492 SKYELNIVSYNCLIDGL 508
                ++V+YN L+DGL
Sbjct: 438 RGSTPDLVTYNTLLDGL 454



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 216/435 (49%), Gaps = 17/435 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL IF  M       P V +FN L   L   +       LF+ +  AG  P++ ++S 
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK GR+     +   ++     P+ V +TS + GLC  +R+ EA     K     
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-----------PNTVTY 256
            + D   ++T+I  LC+ GH   A N   E    +G     CK           P+   +
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDEN---INPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           NT+I  +CK   +     LF +MK        P++ TY  ++   C A   +EA+ L  E
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M + G+ PDVVT+S ++D LCK GK+D+A  LLE M   GV P+++T  ++++      K
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D+A     +M++ G   D+V+YNTL++  CK   ++EA++  ++M++    P V +Y  
Sbjct: 425 VDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTI 484

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +   L    Q   A  +F EM +  V  DT  Y++ +DGL ++G    ALEL +    S 
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT---SL 541

Query: 494 YELNIVSYNCLIDGL 508
            + + V +  ++DGL
Sbjct: 542 CKPDFVMHKMVVDGL 556



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 12/349 (3%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI--LRSCF- 173
           L ++   D     F+ + S    P     + LI+  CK  R+  G ++  R+  ++  + 
Sbjct: 276 LCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYC 335

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            PN  T+  ++  LC   ++ EA  L  +   +   PDV TY+ L++GLC+ G    A +
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L EEM+   G F     P++ T  +I++ L K G VD A      MK     PD+VTY +
Sbjct: 396 LLEEMSK-EGVF-----PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++ G C A   +EA     +M+     PDV ++++I+  LC++G+   A  + + M+ RG
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V P+T  Y++L+DG       D A +L   ++++ C  D V +  +++  CK    E+A 
Sbjct: 510 VLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDAC 566

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            +   M   G      TY  +  GL ++ +V++A +L D+    H + +
Sbjct: 567 EVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVE 615



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 52/333 (15%)

Query: 88  NEALCIFDYML-RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF---PDIY 143
           +EA   F+ M+ R HP  P    FN L   + K+K     + LF+R+ S   F   P++ 
Sbjct: 283 DEACKTFEEMISRNHP--PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE 340

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--- 200
           T++I+++  CK  ++     ++  +     +P+ VT+++L+ GLC   ++  A  L    
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTI 259
           +K  VF   PD FT  +++N L + G    AL+  E M A G+        P+ VTYNT+
Sbjct: 401 SKEGVF---PDSFTDASILNALSKAGKVDYALSHLETMKARGS-------TPDLVTYNTL 450

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +DGLCK G +D+A     KM      PDV +YT +I   C +     A  +F EM+ +GV
Sbjct: 451 LDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGV 510

Query: 320 QPDVVTF--------------------------------SVIMDELCKNGKMDKASRLLE 347
            PD V +                                 +++D LCK GK + A  ++E
Sbjct: 511 LPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVE 570

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            M   G   + +TY  ++ G     K+D AR+L
Sbjct: 571 RMADAGFPADAFTYINVVRGLRKLGKVDKARQL 603



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 9/243 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K    D    L + ++  G+FPD +T + ++N   K G+V +    
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     TP+ VT+ +L+ GLC   RI EA     K     C PDVF+Y  +I  LCR
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  +F+EM     + GV+  P+TV Y++++DGL + G  D A EL   +K    
Sbjct: 492 SGQAAGAHAIFQEMV----KRGVL--PDTVLYHSLLDGLARNGLEDLALEL---LKTSLC 542

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD V +  V+ G C A    +A  +   M D G   D  T+  ++  L K GK+DKA +
Sbjct: 543 KPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQ 602

Query: 345 LLE 347
           L++
Sbjct: 603 LVD 605


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 207/406 (50%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N    CL +N H    L +   +   G  PD++T++ +INC  K G +     +
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           + +++ R C  P+  TF +LI  LC+++R+ EA  L  +  V    PDV+T+N LIN LC
Sbjct: 358 VNQMVDRGCL-PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   + + LFEEM +        C P+ VTYN +ID LC  G +  A +L  +M+   
Sbjct: 417 KVGDPHLGIRLFEEMKSSG------CAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                VTY ++I   C      EA+ +F +M   G+    VTF+ ++D LCK  ++D A+
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+E M+  G+ P+  TYN+++  YC    +  A  +  +M +NG   DVV+Y TLIN  
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK    + AL L   M  KGI+PT   YN +   LF  + +  AL LF EM       D 
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY     GLC+ G  + EA +    + +  +     S+  L +GL
Sbjct: 651 LTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 210/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N L   L +     T + + + ++S  + PD  T + L+  F + G +     V
Sbjct: 193 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV 252

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ +  +P  VT   LI G C   R+ +A     K      EPD  TYNT ++ LC+
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            GH   AL + + M     +      P+  TYNT+I+ L K G +D+AK +  +M D   
Sbjct: 313 NGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+ ++I   C  N   EA  L  E+  +G+ PDV TF+++++ LCK G      R
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   G  P+  TYN LID  C   K+ +A  L   MESNGC    V+YNT+I+  C
Sbjct: 427 LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALC 486

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +EEA  ++ +M + GI  + VT+NTL  GL +  +++ A +L ++M +  +     
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN+ +   CK G + +A ++   +  + +E+++V+Y  LI+GL
Sbjct: 547 TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 210/408 (51%), Gaps = 6/408 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P  ++F  L     +    +  L +  ++   G  P   T ++LIN +CKMGRV  
Sbjct: 224 HAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVED 283

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
               + + +   F P+ VT+ + +  LC    +  A  +         +PDVFTYNT+IN
Sbjct: 284 ALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVIN 343

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            L + G    A  +  +M +        C P+T T+NT+I  LC +  +++A +L  ++ 
Sbjct: 344 CLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALCSQNRLEEALDLARELT 397

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            + ++PDV T+  +I   C   D +   RLF EM   G  PD VT+++++D LC  GK+ 
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A  LL+ M   G   +T TYNT+ID  C   +I+ A ++F  M+++G     V++NTLI
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  CK K +++A  L  +M+ +G++P+ +TYN++     +   +++A  + + M  N   
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D  TY   I+GLCK+G    AL+L R +R         +YN +I  L
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 625



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 202/424 (47%), Gaps = 9/424 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  AL + +  L      P  + +  +   L     +D +  L + +   G         
Sbjct: 69  PEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVR 128

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT--FTSLIKGLCAESRIMEAAALFTKHR 204
             +  + ++ R     V L R   + F   A T  +  L+  L   SR+    +++ +  
Sbjct: 129 SFVESYARLRRFDDA-VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMT 187

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               +PDV T NTLI  LCR      A+ + EEM++          P+  T+ T++ G  
Sbjct: 188 DRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH------AVAPDETTFTTLMQGFI 241

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +EG ++ A  +  KM +   +P  VT   +I G+C      +A     + +  G +PD V
Sbjct: 242 EEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQV 301

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++  +  LC+NG +  A ++++LM+  G +P+ +TYNT+I+      ++D A+ +   M
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              GC+ D  ++NTLI   C    +EEAL L  E+  KG+ P V T+N L   L ++   
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
              ++LF+EM+ +  A D  TYN  ID LC  G ++ AL+L + +  +    + V+YN +
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI 481

Query: 505 IDGL 508
           ID L
Sbjct: 482 IDAL 485



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 178/388 (45%), Gaps = 43/388 (11%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D ML+     P V ++N +  CL+KN   D    +  ++   G  PD  T + LI
Sbjct: 319 ALKVMDLMLQ-EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 377

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C   R+     +   +     +P+  TF  LI  LC          LF + +   C 
Sbjct: 378 VALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCA 437

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD  TYN LI+ LC  G  + AL+L +EM + NG     C  +TVTYNTIID LCK+  +
Sbjct: 438 PDEVTYNILIDHLCSMGKLVNALDLLKEMES-NG-----CPRSTVTYNTIIDALCKQMRI 491

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+E+F +M    I+   VT+ ++I G C A   ++A  L  +M+ +G+QP  +T++ I
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSI 551

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G + KA+ +LE M   G   +  TY TLI+G C   +   A KL   M   G 
Sbjct: 552 LTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEM------------------------------ 419
                +YN +I    +  ++ +ALSL+ EM                              
Sbjct: 612 RPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAF 671

Query: 420 ------LSKGIKPTVVTYNTLFLGLFEI 441
                 ++KG  P   ++  L  GL  +
Sbjct: 672 DFLVEMVNKGFMPEFSSFRMLAEGLLNL 699



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 7/251 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++N +   L K    +    +F ++++ G+     T + LI+  CK  R+     
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ ++++    P+ +T+ S++   C +  + +AA +         E DV TY TLINGLC
Sbjct: 532 LIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLC 591

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G T VAL L   M           +P    YN +I  L +   +  A  LF +M +  
Sbjct: 592 KAGRTQVALKLLRGMRIKG------IRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645

Query: 284 INPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             PD +TY  V RG C       EA    +EM+++G  P+  +F ++ + L   G  D  
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYL 705

Query: 343 SRLLELMIWRG 353
              +EL+I + 
Sbjct: 706 ISAIELIIEKA 716


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/405 (33%), Positives = 214/405 (52%), Gaps = 14/405 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P     N++ G L +       L +++++N A   PD  T++ L++   K  R+     V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
           L  ++ +   P+  T T +++ LC   R+ +A  L  +  HR  A   +  TY+ L++GL
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA--ANAITYSALVDGL 119

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A+ L E MA    E G  C P  VTYN+II G C+   VD+A     +M  E
Sbjct: 120 CKCERLDEAVALVETMA----ERG--CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE 173

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             +PD++TYT++I GFC + D      L  E+  +G  PD+VT+S ++D LCK G++  A
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 233

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             + E M      P   TYN+LI GYC    +D A +L   M  + C  DVV+Y TL++ 
Sbjct: 234 VDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +CK   +++A  L+ +M++  + P VVT+ +L  GL    ++E AL+L +E+ R      
Sbjct: 291 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            YTYN  +DG CK+  V +A EL    R   +  N V+YN L+ G
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395



 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 208/405 (51%), Gaps = 12/405 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + + M     +P  V+  +I+ G   + +  D      +++ + G  PDI T++ 
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITG-FCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FCK   V  G  +LG + R  FTP+ VT++++I GLC   R+ +A  +F +    +
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE---MS 241

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P   TYN+LI G CR G    A+ L  +M +        C P+ VTY T++   CK G
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK------CAPDVVTYTTLMSAFCKMG 295

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A ELF +M    ++PDVVT+TS++ G C      +A  L  E+  +G  P + T++
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK  ++ KA  L+     RG  PNT TYN L+ G C   + D A +    + S 
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415

Query: 388 G--CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           G  C   V  Y  +++  C++   ++A+  Y EM+ +G  P   T+ T+   L + HQ +
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +A +L +EM +        T +  +   C++G + +A EL   +R
Sbjct: 476 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 209/436 (47%), Gaps = 36/436 (8%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL ++  M   HP  P   ++  L   L+K +     + + + + SA   PD  T ++++
Sbjct: 24  ALGVYRQMNDAHP--PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVV 81

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C   RV     ++  +L      NA+T+++L+ GLC   R+ EA AL        C 
Sbjct: 82  QSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCA 141

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEFGVVCK---------- 250
           P V TYN++I G CR      A    E+M A G            G  CK          
Sbjct: 142 PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLEL 201

Query: 251 ----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                     P+ VTY+T+IDGLCK G +  A ++F +M   +  P  +TY S+I G+C 
Sbjct: 202 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCR 258

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           A D +EA RL  +M+D    PDVVT++ +M   CK G++D A  L + M+   ++P+  T
Sbjct: 259 AGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 318

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           + +L+DG C   +++ A +L   +   GC   + +YN +++ YCK   V +A  L ++  
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT--YNNFIDGLCKSGF 478
           S+G  P  VTYN L  G     + ++AL+  D++        T    Y   +D LC+ G 
Sbjct: 379 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 438

Query: 479 VLEALELFRAIRDSKY 494
             +A++ +  +    Y
Sbjct: 439 TDDAVQFYEEMIQRGY 454



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 1/225 (0%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +NP  + +  VI G C A     A  ++ +M D    PD +T++ ++  L K  ++  A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++L+ M+     P+  T   ++   CL D++D AR+L   M   G   + ++Y+ L++  
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK + ++EA++L   M  +G  PTVVTYN++  G     +V+ A    ++M       D 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   I G CKS  V   LEL   +    +  +IV+Y+ +IDGL
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGL 224



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/105 (19%), Positives = 45/105 (42%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P P  V+ + I+   L ++   D  +  ++ +   G  P   T + ++   CK  +    
Sbjct: 418 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 477

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
             +L  +++   TP   T  +++   C    I +A  L ++ R++
Sbjct: 478 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 206/396 (52%), Gaps = 30/396 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD ML   PSP  V +++ +   L+K +  D    +F R+   G+ PD   ++ 
Sbjct: 224 DKAYSLFDAMLDRGPSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 282

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +C  G+      +  ++ R    P+ VT+T+L+  LC   +  EA  +F       
Sbjct: 283 LVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRG 342

Query: 208 CEPDVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGVV-------------- 248
            +PD  TY TL++G    G     H ++ L + + M  G+  F ++              
Sbjct: 343 HKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEAL 402

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+ V Y T++D LC  G VD A   F  +K E + P++V +T++I G 
Sbjct: 403 LVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 462

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  + W++ + L  EM+D+G+  D + F+ IM  LCK G++ +A  L +LM+  G+ PNT
Sbjct: 463 CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNT 522

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTLIDGYCL  K+D A KL   M  NG     V+YNT+IN Y +N  +E+ L+L  E
Sbjct: 523 NTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLRE 582

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           M  KG+ P +VTY  L  GLF+  +   A +L+  M
Sbjct: 583 MDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 242/516 (46%), Gaps = 81/516 (15%)

Query: 67  KKFLKERCKSSGQGDINLIT-PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           K+  +   K + QG     T P +A  +FD +L+       +   N     +A+      
Sbjct: 22  KQGGRGGAKRTKQGGRQRATEPGDAHQVFDRLLK-RGDRASIFDLNRALSDVARASPA-V 79

Query: 126 VLSLFKRLNSAGL---FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
            +SLF R+  AG     P+I T+ I+I C  ++GR+   F  +GR++ +    + + F+ 
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 183 LIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           L+KGLC   R  +A  +  +      C+PD+F+Y  L+ GLC    +  AL+L   MA+ 
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 199

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI------ 295
            G     C  + V Y T+I+GL +EG +DKA  LF  M D   +PDVVTY+S+I      
Sbjct: 200 KGR----CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKT 255

Query: 296 -----------------------------RGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
                                         G+C +    EA  +F +M   GV+PDVVT+
Sbjct: 256 QAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTY 315

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT--------------- 371
           + +MD LCKNGK  +A ++ + ++ RG  P++ TY TL+ GY                  
Sbjct: 316 TALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 375

Query: 372 --------------------DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
                               +K+D A  +F +M   G   D+V+Y T+++  C    V++
Sbjct: 376 KGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDD 435

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           ALS ++ + S+G+ P +V + TL  GL    + ++  +L  EM    +  DT  +N  + 
Sbjct: 436 ALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMG 495

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            LCK G V+EA  LF  +     E N  +YN LIDG
Sbjct: 496 NLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 531



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V ++  +   L +    D   SLF  +   G  PD+ T+S +I+   K   +     
Sbjct: 204 PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQ 263

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V  R++++   P+ + +TSL+ G C+  +  EA  +F K      EPDV TY  L++ LC
Sbjct: 264 VFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC 323

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G +  A  +F+ +    G      KP++ TY T++ G   EG + +  +L   M  + 
Sbjct: 324 KNGKSTEARKIFDSLVK-RGH-----KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 377

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +      +  ++  +   N  +EA  +F  M  QG+ PD+V +  ++D LC  G++D A 
Sbjct: 378 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 437

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
                +   G+ PN   + TLI G C  DK D   +L   M   G   D + +N ++   
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   V EA +L+  M+  GI+P   TYNTL  G     +++ A+KL   M  N V    
Sbjct: 498 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  I+G  ++G + + L L R +        IV+Y  L+ GL
Sbjct: 558 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 602


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 206/396 (52%), Gaps = 30/396 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD ML   PSP  V +++ +   L+K +  D    +F R+   G+ PD   ++ 
Sbjct: 225 DKAYSLFDAMLDRGPSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 283

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +C  G+      +  ++ R    P+ VT+T+L+  LC   +  EA  +F       
Sbjct: 284 LVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRG 343

Query: 208 CEPDVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGVV-------------- 248
            +PD  TY TL++G    G     H ++ L + + M  G+  F ++              
Sbjct: 344 HKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEAL 403

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+ V Y T++D LC  G VD A   F  +K E + P++V +T++I G 
Sbjct: 404 LVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGL 463

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  + W++ + L  EM+D+G+  D + F+ IM  LCK G++ +A  L +LM+  G+ PNT
Sbjct: 464 CTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNT 523

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTLIDGYCL  K+D A KL   M  NG     V+YNT+IN Y +N  +E+ L+L  E
Sbjct: 524 NTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLRE 583

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           M  KG+ P +VTY  L  GLF+  +   A +L+  M
Sbjct: 584 MDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 237/517 (45%), Gaps = 82/517 (15%)

Query: 67  KKFLKERCKSSGQGDINLIT-PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           K+  +   K + QG     T P +A  +FD +L+       +   N     +A+      
Sbjct: 22  KQGGRGGAKRTKQGGRQRATEPGDAHQVFDRLLK-RGDRASIFDLNRALSDVARASPA-V 79

Query: 126 VLSLFKRLNSAGL---FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF--TPNAVTF 180
            +SLF R+  AG     P+I T+ I+I C  ++GR+   F  +GR++ +     PN +  
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
           +S      A  R M    +  +     C+PD+F+Y  L+ GLC    +  AL+L   MA+
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD 199

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI----- 295
             G     C  + V Y T+I+GL +EG +DKA  LF  M D   +PDVVTY+S+I     
Sbjct: 200 HKGR----CPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSK 255

Query: 296 ------------------------------RGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
                                          G+C +    EA  +F +M   GV+PDVVT
Sbjct: 256 TQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVT 315

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT-------------- 371
           ++ +MD LCKNGK  +A ++ + ++ RG  P++ TY TL+ GY                 
Sbjct: 316 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMM 375

Query: 372 ---------------------DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
                                +K+D A  +F +M   G   D+V+Y T+++  C    V+
Sbjct: 376 KKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVD 435

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +ALS ++ + S+G+ P +V + TL  GL    + ++  +L  EM    +  DT  +N  +
Sbjct: 436 DALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIM 495

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LCK G V+EA  LF  +     E N  +YN LIDG
Sbjct: 496 GNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 532



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 6/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V ++  +   L +    D   SLF  +   G  PD+ T+S +I+   K   +     
Sbjct: 205 PLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQ 264

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V  R++++   P+ + +TSL+ G C+  +  EA  +F K      EPDV TY  L++ LC
Sbjct: 265 VFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLC 324

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G +  A  +F+ +    G      KP++ TY T++ G   EG + +  +L   M  + 
Sbjct: 325 KNGKSTEARKIFDSLVK-RGH-----KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 378

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +      +  ++  +   N  +EA  +F  M  QG+ PD+V +  ++D LC  G++D A 
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 438

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
                +   G+ PN   + TLI G C  DK D   +L   M   G   D + +N ++   
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 498

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   V EA +L+  M+  GI+P   TYNTL  G     +++ A+KL   M  N V    
Sbjct: 499 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 558

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  I+G  ++G + + L L R +        IV+Y  L+ GL
Sbjct: 559 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGL 603


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/402 (33%), Positives = 212/402 (52%), Gaps = 8/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  +   LAKNK     ++L +++ + G  P I T++ L+N  CKMGR+     +L 
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +I+ +  TP+ VT+TSLI GL  + R  EA  LF +        D   Y  LI GL + G
Sbjct: 94  KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A ++++ M +        C P+ VT +T+IDGLCK G +  A  +F  M+   + P
Sbjct: 154 KIPQASSVYKTMTSQG------CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + V Y+++I G C A   + A  +  +M      PD +T+++++D LCK+G +  A    
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+  G  P+ YTYN LI G+C     D A  +F  M S+ C  +VV+Y TLI+  CK 
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           + + +A   Y  M  +G  P    Y++L  GL +  ++E    LFDEM R+ V A++ T 
Sbjct: 328 RQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTR 386

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I  LCK+  V EA+ LF AIR      +  +YN +I  L
Sbjct: 387 TRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISAL 427



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T SILIN   K G +     +      +  T +  T+T+++  L    +I EA AL  K 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ VTY ++IDGL
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGL 114

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K+    +A +LF +M    +  D V YT++IRG   A    +A  ++  M  QG  PDV
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT S ++D LCK G++  A R+ + M  RG+ PN   Y+ LI G C   K+D A ++   
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+   C  D ++YN LI+  CK+ DV  A + + EML  G KP V TYN L  G  +   
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            + A  +FD+M  +  + +  TY   I GLCK   + +A   ++ +++     +   Y+ 
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSS 354

Query: 504 LIDGL 508
           L+DGL
Sbjct: 355 LVDGL 359



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 194/384 (50%), Gaps = 6/384 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +F+IL   L K        SL +   + G   DI+T++ +++   K  ++     ++ +I
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
             +  TP   T+ +L+ GLC   R+ EA  L  K     C PDV TY +LI+GL +   +
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LF+EMA+       VC      Y  +I GL + G + +A  ++  M  +   PDV
Sbjct: 121 FEAYKLFKEMASRGLALDTVC------YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VT +++I G C A     A R+F  M  +G+ P+ V +S ++  LCK  KMD A  +L  
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M      P+T TYN LIDG C +  +  AR  F  M   GC  DV +YN LI+ +CK  +
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            + A  ++ +M S    P VVTY TL  GL +  Q+ +A   +  M+      D++ Y++
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSS 354

Query: 469 FIDGLCKSGFVLEALELFRAIRDS 492
            +DGLCKSG +     LF  +  S
Sbjct: 355 LVDGLCKSGKLEGGCMLFDEMERS 378



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 149/292 (51%), Gaps = 8/292 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           S++K + S G  PD+ T S +I+  CK GR+     +   +      PN V +++LI GL
Sbjct: 160 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 219

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C   ++  A  +  + +   C PD  TYN LI+GLC++G    A   F+EM         
Sbjct: 220 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG----- 274

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            CKP+  TYN +I G CK G  D A  +F  M     +P+VVTY ++I G C      +A
Sbjct: 275 -CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA 333

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
              +  M ++G  PD   +S ++D LCK+GK++    L + M   GV  N+ T   LI  
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFH 392

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            C  +++D A  LF ++   G  H   +YN++I+   K+  V E  ++Y EM
Sbjct: 393 LCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 143/280 (51%), Gaps = 8/280 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + + +   L K       + +FK + + GL P+   +S LI+  CK  ++     +
Sbjct: 172 PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 231

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ ++  TP+ +T+  LI GLC    +  A A F +     C+PDV+TYN LI+G C+
Sbjct: 232 LAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCK 291

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+T  A  +F++M++        C PN VTY T+I GLCK   + KA   +  MK+   
Sbjct: 292 AGNTDAACGVFDDMSSSR------CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGC 345

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   Y+S++ G C +        LF EM   GV  +  T + ++  LCK  ++D+A  
Sbjct: 346 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVS 404

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           L   +   G+ P+ Y YN++I     + K++  + ++  M
Sbjct: 405 LFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 10/225 (4%)

Query: 92  CIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           C  + + +M  +   P   ++NIL   L K+       + F  +  AG  PD+YT++ILI
Sbjct: 227 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILI 286

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + FCK G       V   +  S  +PN VT+ +LI GLC   ++ +A+  +   +   C 
Sbjct: 287 SGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCP 346

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD F Y++L++GLC++G       LF+EM       GV    N+ T   +I  LCK   V
Sbjct: 347 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS----GVA---NSQTRTRLIFHLCKANRV 399

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           D+A  LF  ++ E + P    Y S+I     +   NE + ++ EM
Sbjct: 400 DEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 214/404 (52%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L+ +    +    F  + S G+ P++YT++ILI   C  G       +
Sbjct: 114 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PN VT+ +L+        +  A  L         +P++ T+N+++NG+C+
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +F+EM            P+ V+YNT++ G CK G   +A  +F +M  + I
Sbjct: 233 AGKMEDARKVFDEMMREG------LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVT+TS+I   C A +   A  L  +M ++G+Q + VTF+ ++D  CK G +D A  
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +  M    + P+   YN LI+GYC+  ++D AR+L   ME+ G   DVV+Y+T+I+ YC
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN D   A  L  +ML KG+ P  +TY++L   L E  ++  A  LF  M +  +  D +
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + IDG CK G V  AL L   +  +    ++V+Y+ LI+GL
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 223/458 (48%), Gaps = 45/458 (9%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD ML      P V ++NIL   L    H    LS+ + +  AG  P++ T++ L+  F 
Sbjct: 138 FDSMLS-DGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 196

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G V     ++G +L     PN VTF S++ G+C   ++ +A  +F +       PD  
Sbjct: 197 RAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGV 256

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMAN--------------------GNGEFGVVC---- 249
           +YNTL+ G C+ G +  AL++F EM                      GN E+ V      
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316

Query: 250 -----KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                + N VT+  +IDG CK+GF+D A      M+   I P VV Y ++I G+C     
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           +EA+ L  EM  +G++PDVVT+S I+   CKN     A  L + M+ +GV P+  TY++L
Sbjct: 377 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 436

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I   C   ++  A  LF +M   G   D  +Y +LI+ +CK  +VE ALSL+ +M+  G+
Sbjct: 437 IRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKL---------------FDEMRRNHVAADTYTYNNF 469
            P VVTY+ L  GL +  +   A +L               +D +      A+  +    
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C  G + EA ++++++ D  + L+   Y+ LI G
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 594



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 197/448 (43%), Gaps = 59/448 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M+R   +P  VS +N L G   K       LS+F  +   G+ PD+ T + LI+  
Sbjct: 242 VFDEMMREGLAPDGVS-YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     ++ ++       N VTFT+LI G C +  + +A       R    +P V
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             YN LING C  G    A  L  EM A G        KP+ VTY+TII   CK      
Sbjct: 361 VCYNALINGYCMVGRMDEARELLHEMEAKG-------LKPDVVTYSTIISAYCKNCDTHS 413

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A EL  +M ++ + PD +TY+S+IR  C     ++A  LF  M+  G+QPD  T++ ++D
Sbjct: 414 AFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG------------------------ 367
             CK G +++A  L + M+  GV P+  TY+ LI+G                        
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533

Query: 368 --------------------------YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                                     +C+   ++ A K++ SM       D   Y+ LI+
Sbjct: 534 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 593

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +C+  +V +ALS + +ML +G  P   +  +L  GLFE   V  A ++  ++      A
Sbjct: 594 GHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLA 653

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAI 489
           D       ID     G V   L++   +
Sbjct: 654 DAEASKALIDLNLNEGNVDAVLDVLHGM 681



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 21/338 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L          D    L   + + GL PD+ T+S +I+ +CK       F +
Sbjct: 358 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 417

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L     P+A+T++SLI+ LC E R+ +A  LF        +PD FTY +LI+G C+
Sbjct: 418 NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 477

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL+L ++M       GV+  P+ VTY+ +I+GL K     +A++L  K+  E  
Sbjct: 478 EGNVERALSLHDKMVKA----GVL--PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531

Query: 285 NPDVVTYTSV---------------IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            P    Y ++               ++GFC     NEA +++  M+D+    D   +SV+
Sbjct: 532 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 591

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C+ G + KA    + M+ RG  PN+ +  +LI G      +  A ++   + +   
Sbjct: 592 IHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCS 651

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           + D  +   LI+      +V+  L +   M   G+ P+
Sbjct: 652 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P+V+ YN + L L +   +  A + FD M  + VA + YTYN  I  LC  G   EA
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
           L + R +R +    N+V+YN L+
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLV 192


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/326 (37%), Positives = 192/326 (58%), Gaps = 10/326 (3%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+ VTFT+L+ GLC E R+++A AL  +      +P    Y T+INGLC+ G T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             +M   +       K + V YN IID LCK+G    A+ LF +M D+ I PDV+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I  FC +  W +A++L  +M+++ + PDVVTFS +++ L K GK+ +A  +   M+ RG+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P T TYN++IDG+C  D+++ A+++  SM S  C  DVV+++TLIN YCK K V+  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++ EM  +GI    VTY TL  G  ++  ++ A  L + M  + VA +  T+ + +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 475 KSGFVLEALELFRAIRDSKYELNIVS 500
               + +A  +   ++ S+    IV 
Sbjct: 298 SKKELRKAFAILEDLQKSEVCPRIVQ 323



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 159/325 (48%), Gaps = 10/325 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L   L         L+L  R+   G  P    +  +IN  CKMG       +
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  +    + V + ++I  LC +   + A  LFT+       PDV TY+ +I+  CR
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  L  +M            P+ VT++ +I+ L KEG V +A+E++  M    I
Sbjct: 124 SGRWTDAEQLLRDMIERQ------INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P  +TY S+I GFC  +  N+AKR+   M  +   PDVVTFS +++  CK  ++D    
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M  RG+  NT TY TLI G+C    +D A+ L   M S+G   + +++ +++   C
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVV 429
             K++ +A ++  ++    + P +V
Sbjct: 298 SKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 31/260 (11%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP----------------- 321
           M +    PDVVT+T+++ G C      +A  L   M+++G QP                 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60

Query: 322 --------------DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
                          VV ++ I+D LCK+G    A  L   M  +G+ P+  TY+ +ID 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +C + +   A +L   M       DVV+++ LIN   K   V EA  +Y +ML +GI PT
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            +TYN++  G  +  ++  A ++ D M     + D  T++  I+G CK+  V   +E+F 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +       N V+Y  LI G
Sbjct: 241 EMHRRGIVANTVTYTTLIHG 260


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 215/407 (52%), Gaps = 11/407 (2%)

Query: 105 PPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHG 161
           P V ++N+L    CLA+    +   ++ + +    G+ P + TH+++++  CK G+V   
Sbjct: 92  PDVETWNVLITGYCLAREP--EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAA 149

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
                    +  T +  T+T+++  L    +I +A AL  K     C P + TYN L+NG
Sbjct: 150 MDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNG 209

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC+ G    A++L  ++ + NG     C P+ VTY ++IDGL KE    +A +LF +M  
Sbjct: 210 LCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 263

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             +  D V YT++IRG   A    +A  ++  M  QG  PDVVT S ++D LCK G++  
Sbjct: 264 RGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGA 323

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A R+ + M  RG+ PN   Y+ LI G C   K+D A ++   M+   C  D ++YN LI+
Sbjct: 324 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 383

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK+ DVE A + + EML  G KP V TYN L  G  +    + A  +FD+M  +H + 
Sbjct: 384 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSP 443

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TY   I GLCK   + +A   F+ +++     +   Y+ L+DGL
Sbjct: 444 NVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 214/402 (53%), Gaps = 8/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  +   LAKNK     ++L +++ + G  P I T++ L+N  CKMGR+     +L 
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +I+ +  TP+ VT+TSLI GL  E R  EA  LF +  +     D   Y  LI GL + G
Sbjct: 225 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A ++++ M +        C P+ VT +T+IDGLCK G +  A  +F  M+   + P
Sbjct: 285 KIPQASSVYKTMTSQG------CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + V Y+++I G C A   + A  +  +M      PD +T+++++D LCK+G ++ A    
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+  G  P+ YTYN L+ G+C     D A  +F  M S+ C  +VV+Y TLI+  CK 
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           + + +A   +  M  +G  P    Y++L  GL +  ++E    LFDEM R+ V A++ T 
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTR 517

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I  LCK+  V EA+ LF AIR      +  +YN +I  L
Sbjct: 518 TRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISTL 558



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 206/406 (50%), Gaps = 6/406 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA  +   M   +   P + + N++   L K+      +  F+   + G   DI+T++
Sbjct: 110 PEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYT 169

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +++   K  ++     ++ +I  +  TP   T+ +L+ GLC   R+ EA  L  K    
Sbjct: 170 AIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 229

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDV TY +LI+GL +   +  A  LF+EMA      G+V   +TV Y  +I GL + 
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA----LRGLVL--DTVCYTALIRGLLQA 283

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G + +A  ++  M  +   PDVVT +++I G C A     A R+F  M  +G+ P+ V +
Sbjct: 284 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 343

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++  LCK  KMD A  +L  M      P+T TYN LIDG C +  ++ AR  F  M  
Sbjct: 344 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 403

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  DV +YN L++ +CK  + + A  ++ +M S    P VVTY TL  GL +  Q+ +
Sbjct: 404 AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTK 463

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           A   F  M+      D++ Y++ +DGLCKSG +     LF  +  S
Sbjct: 464 ASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS 509



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 10/206 (4%)

Query: 92  CIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           C  + + +M  +   P   ++NIL   L K+   +   + F  +  AG  PD+YT++IL+
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + FCK G       V   +  S  +PN VT+ +LI GLC   ++ +A+  F   +   C 
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP 477

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD F Y++L++GLC++G       LF+EM       GV    N+ T   +I  LCK   V
Sbjct: 478 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS----GVA---NSQTRTRLIFHLCKANRV 530

Query: 270 DKAKELFLKMKDENINPDVVTYTSVI 295
           D+A  LF  ++ E + P    Y S+I
Sbjct: 531 DEAVSLFNAIRKEGM-PHPYAYNSII 555



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 38/258 (14%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQ--GVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++  +V++ F    D + A  LF  +     G Q  V T + ++D   +  +  +A  LL
Sbjct: 23  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 82

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME--------------------- 385
           +  +     P+  T+N LI GYCL  + + A  +   ME                     
Sbjct: 83  KNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCK 142

Query: 386 ---------------SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                          +NGC  D+ +Y  +++W  KNK +++A++L  ++ + G  PT+ T
Sbjct: 143 SGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIAT 202

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YN L  GL ++ ++E A+ L  ++  N    D  TY + IDGL K     EA +LF+ + 
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 262

Query: 491 DSKYELNIVSYNCLIDGL 508
                L+ V Y  LI GL
Sbjct: 263 LRGLVLDTVCYTALIRGL 280


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 213/402 (52%), Gaps = 11/402 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V++FN     L K         L  R+   G  P+ +T+ +L++  C+MG+V    ++
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLC 223
           L ++      PN V F +LI G  +  R+ EA A+  +  +   C PD+FTYNTLI GLC
Sbjct: 345 LNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+ + A  L  EM          C+PN +TY  +ID  CKEG +++A+ +  +M  + 
Sbjct: 401 KKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  + V Y  +I   C      +A  +F +M  +G +PD+ TF+ ++  LCK  K ++A 
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M+  GV  NT TYNTLI  +     +  A KL   M   GC  D ++YN LI   
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+  ++E+ L+L+ +M+SKG+ P  ++ N L  GL     ++ AL+   +M    +  D 
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 634

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            TYN+ I+GLCK+G   EAL LF  ++      + ++YN LI
Sbjct: 635 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 676



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/430 (32%), Positives = 215/430 (50%), Gaps = 16/430 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G+   + PN    +F  ML    SP  V +F ++   L      D+  +L K +   G  
Sbjct: 195 GNCPKVVPN----VFYEMLSKGISPT-VYTFGVVMKALCLVNEVDSACALLKDMTRHGCV 249

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+   +  LI+   K+GRV+    +L  +L     P+  TF   I GLC   RI EAA L
Sbjct: 250 PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 309

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +  +    P+ FTY  L++GLCR G    A  L  ++ N          PN V +NT+
Sbjct: 310 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVVLFNTL 359

Query: 260 IDGLCKEGFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I+G    G +D+AK +  + M      PD+ TY ++I G C       A+ L  EM  +G
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +P+V+T+++++D  CK G++++A  +L+ M  +G+  N   YN LI   C  +K+  A 
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 479

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +F  M S GC  D+ ++N+LI   CK    EEAL LY +ML +G+    +TYNTL    
Sbjct: 480 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 539

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
                ++ ALKL ++M       D  TYN  I  LC++G + + L LF  +       N 
Sbjct: 540 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599

Query: 499 VSYNCLIDGL 508
           +S N LI+GL
Sbjct: 600 ISCNILINGL 609



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 218/425 (51%), Gaps = 9/425 (2%)

Query: 84  LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           L+   ++ C     +  H   P    +  L   L K    + VL L + +   G  PD+ 
Sbjct: 229 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T +  I+  CKM R+     ++ R+L   FTPN+ T+  L+ GLC   ++ EA  L  K 
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK- 347

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 P+V  +NTLING    G    A  +  E         V C P+  TYNT+I GL
Sbjct: 348 ---VPNPNVVLFNTLINGYVSRGRLDEAKAVMHE-----SMLSVGCGPDIFTYNTLILGL 399

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK+G++  A+EL  +M+ +   P+V+TYT +I  FC      EA+ +  EM  +G+  + 
Sbjct: 400 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V ++ ++  LCK+ K+  A  +   M  +G  P+ +T+N+LI G C  +K + A  L+  
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G + + ++YNTLI+ + +   ++EAL L ++ML +G     +TYN L   L     
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +E+ L LF++M    +  +  + N  I+GLC++G +  ALE  R +       +IV+YN 
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639

Query: 504 LIDGL 508
           LI+GL
Sbjct: 640 LINGL 644



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 215/423 (50%), Gaps = 11/423 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +A  +   M  ++   P   S+N++   L        V ++F  + S G+ P +YT  
Sbjct: 162 PGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFG 221

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++   C +  V     +L  + R    PNA+ + +LI  L    R+ E   L  +  + 
Sbjct: 222 VVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLM 281

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDV T+N  I+GLC+      A  L + M            PN+ TY  ++ GLC+ 
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLCRM 335

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVT 325
           G VD+A+ L  K+     NP+VV + ++I G+      +EAK +  E M+  G  PD+ T
Sbjct: 336 GKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 391

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LCK G +  A  L+  M  +G  PN  TY  LID +C   +++ AR +   M 
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   + V YN LI+  CK++ V++AL+++ +M SKG KP + T+N+L  GL ++++ E
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL L+ +M    V A+T TYN  I    + G + EAL+L   +      L+ ++YN LI
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571

Query: 506 DGL 508
             L
Sbjct: 572 KAL 574



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 159/335 (47%), Gaps = 29/335 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K  +  +   L   +   G  P++ T++ILI+ FCK GR+     V
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +       NAV +  LI  LC + ++ +A  +F       C+PD+FT+N+LI GLC+
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 225 TGHTIVALNLFEEM------ANG-----------------------NGEFGVVCKPNTVT 255
                 AL L+++M      AN                        N      C  + +T
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I  LC+ G ++K   LF  M  + +NP+ ++   +I G C   +   A     +M+
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+ PD+VT++ +++ LCK G+  +A  L + +   G+ P+  TYNTLI  +C     D
Sbjct: 627 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 686

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            A  L      +G + + V++  L++ + K  D E
Sbjct: 687 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 118/275 (42%), Gaps = 33/275 (12%)

Query: 265 KEGFVDKAKELFLKMKD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           + G   +A  L L M+   +  P   +Y  V+      N       +F EM+ +G+ P V
Sbjct: 158 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 217

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            TF V+M  LC   ++D A  LL+ M   G  PN   Y TLI       +++   KL   
Sbjct: 218 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE 277

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   GC+ DV ++N  I+  CK   + EA  L   ML +G  P   TY  L  GL  + +
Sbjct: 278 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 337

Query: 444 VERALKLFDEMRRNHV--------------------------------AADTYTYNNFID 471
           V+ A  L +++   +V                                  D +TYN  I 
Sbjct: 338 VDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           GLCK G+++ A EL   ++    E N+++Y  LID
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 40/254 (15%)

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL--- 346
            Y  +I     A ++     L ++M  +G+      F +IM    + G   +A+RLL   
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 347 ---------------------------------ELMIWRGVNPNTYTYNTLIDGYCLTDK 373
                                              M+ +G++P  YT+  ++   CL ++
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A  L   M  +GC+ + + Y TLI+   K   V E L L  EML  G  P V T+N 
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
              GL ++ ++  A KL D M       +++TY   + GLC+ G V EA  L   + +  
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP- 351

Query: 494 YELNIVSYNCLIDG 507
              N+V +N LI+G
Sbjct: 352 ---NVVLFNTLING 362


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 222/447 (49%), Gaps = 40/447 (8%)

Query: 92  CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           C+    +  H   P    +  L   L+K    D  L L + +   G  PD+ T + +I  
Sbjct: 230 CLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYG 289

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--------- 202
           FC++ RV  G  ++ R++   FTPN +T+  L+ GLC   RI EA AL +K         
Sbjct: 290 FCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHF 349

Query: 203 ---------------HRVFACE--------PDVFTYNTLINGLCRTGHTIVALNLFEEM- 238
                             F  +        PDVFT++TL+NGLC+ G    AL L  +M 
Sbjct: 350 NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMD 409

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
           A G       CKPN  TY  +IDG CK+G +++A  +  +M  +  + + V Y ++I   
Sbjct: 410 AKG-------CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISAL 462

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C     +EA  +F EM  +G +PD+ TF+ ++  LC+  +M+ A  L   M+  GV  N+
Sbjct: 463 CKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANS 522

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            T+NTLI  +    +I  A KL   M   GC  D ++YN LI   CK   VE+ L L+ E
Sbjct: 523 VTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEE 582

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ KG+ P+++T N L  G     +V  AL+   +M     + D  TYN+ I+GLCK G 
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGR 642

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLI 505
           + EAL LF  ++    + + ++YN LI
Sbjct: 643 IQEALNLFEKLQAEGIQPDSITYNTLI 669



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 213/423 (50%), Gaps = 11/423 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +A  +   M  ++   P   S+N++   L          ++F  + S G+ P+ YT  
Sbjct: 155 PGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFG 214

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++   C +  V +  ++L  + +    PN++ + +LI  L    R+ EA  L  +  + 
Sbjct: 215 LVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLM 274

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDV T+NT+I G CR    +    L + M            PN +TY  ++ GLCK 
Sbjct: 275 GCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG------FTPNDMTYGYLMHGLCKT 328

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR-LFIEMMDQGVQPDVVT 325
             +D+A+ L  K+      P+VV + +++ GF      NEA   ++ +M++ G  PDV T
Sbjct: 329 CRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFT 384

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS +++ LCK G    A  L+  M  +G  PN  TY  LIDG+C   +++ A  +   M 
Sbjct: 385 FSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREML 444

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           + G   + V YN LI+  CK+  + EAL ++ EM SKG KP + T+N+L  GL  + ++E
Sbjct: 445 TKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEME 504

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL L+ +M    V A++ T+N  I    + G + EAL+L   +      L+ ++YN LI
Sbjct: 505 DALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLI 564

Query: 506 DGL 508
             L
Sbjct: 565 KAL 567



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 180/361 (49%), Gaps = 31/361 (8%)

Query: 88  NEALC-IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA   ++D M+  +   P V +F+ L   L K   + + L L   +++ G  P++ T++
Sbjct: 363 NEATAFVYDKMIN-NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYT 421

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI+ FCK G++    ++L  +L   F+ N V + +LI  LC   +I EA  +F +    
Sbjct: 422 ILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSK 481

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM------ANG------------NGEFGVV 248
            C+PD+FT+N+LI GLCR      AL L+ +M      AN              GE    
Sbjct: 482 GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541

Query: 249 -----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                      C  + +TYN +I  LCK G V+K   LF +M  + + P ++T   +I G
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC A   + A     +M+ +G  PD+VT++ +++ LCK G++ +A  L E +   G+ P+
Sbjct: 602 FCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           + TYNTLI   C     D A  L      NG + + V++N L+  + K  + E     Y+
Sbjct: 662 SITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYA 721

Query: 418 E 418
           +
Sbjct: 722 Q 722



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 40/254 (15%)

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGV------------------------------ 319
            Y  +I     A  +    RL ++M ++G+                              
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165

Query: 320 ------QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
                 +P   +++V++D L        AS +   M+ +GV+PN YT+  ++   C+ ++
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D+A  L   M  +GC+ + + Y TLI+   K   V+EAL L  EM   G  P V T+NT
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G   +++V    KL D M       +  TY   + GLCK+  + EA  L   +    
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP- 344

Query: 494 YELNIVSYNCLIDG 507
              N+V +N L++G
Sbjct: 345 ---NVVHFNTLVNG 355


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 208/397 (52%), Gaps = 7/397 (1%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L     + K       LFK        PD  T+S LIN FCK       + +L  + +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+   + ++IKGLC   R+ ++A +  +     C P V TY  L++ LC++     
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRV-DSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  + E+M          C PN VTYNT+I+G CK G +D+A  LF +M + + +PDV T
Sbjct: 121 ASLILEDMIEAG------CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G+C      +  +L  EM+  G +P+ +T++ +MD L K+GK   A  L ++M+
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            R   P+ +T+N +ID +C   ++D A +LF  M   GC+ D+ +YN +I+  C+   ++
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A  L   M   G  P VVTYN++  GL +  QV+ A ++++ +R      D  T +  I
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           DGLCKS  + +A +L R +  +    ++V+Y  LI G
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 195/355 (54%), Gaps = 6/355 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ IL   L K+        + + +  AG  P++ T++ LIN FCK+G +    V+
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +  +P+  T+  LI G C + R  + A L  +   + CEP+  TYNTL++ L +
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G  I A NL + M   +      CKP+  T+N +ID  CK G +D A ELF  M D   
Sbjct: 220 SGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ TY  +I G C AN  ++A++L   M + G  PDVVT++ I+  LCK  ++D+A  
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E++   G   +  T +TLIDG C + ++D A KL   ME NG   DVV+Y  LI+ +C
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           K   ++++L+ +SEML KG  PTV+TY+ +   L +  +V     L   M    V
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 205/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ L     K + +     L   +   G+ P    ++ +I   C  GRV    V 
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R C  P+ +T+T L+  LC  +RI +A+ +        C P+V TYNTLING C+
Sbjct: 91  YRDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+ LF +M   +      C P+  TYN +IDG CK+       +L  +M     
Sbjct: 150 LGNMDEAVVLFNQMLENS------CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +TY +++     +  + +A  L   M+ +  +P   TF++++D  CK G++D A  
Sbjct: 204 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L +LM  RG  P+ YTYN +I G C  ++ID AR+L   M   GC  DVV+YN++++  C
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V+EA  +Y  + + G    VVT +TL  GL +  +++ A KL  EM RN  A D  
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 383

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   I G CK+  + ++L  F  + D      +++Y+ +ID L
Sbjct: 384 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 197/385 (51%), Gaps = 7/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  + +N +   L  N   D+ L  ++ +      P + T++IL++  CK  R+S   ++
Sbjct: 66  PHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLI 124

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   PN VT+ +LI G C    + EA  LF +    +C PDVFTYN LI+G C+
Sbjct: 125 LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK 184

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                    L +EM     ++G  C+PN +TYNT++D L K G    A  L   M   + 
Sbjct: 185 QERPQDGAKLLQEMV----KYG--CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   T+  +I  FC     + A  LF  M D+G  PD+ T+++++   C+  ++D A +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LLE M   G  P+  TYN+++ G C   ++D A +++  + + G   DVV+ +TLI+  C
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K++ +++A  L  EM   G  P VV Y  L  G  +  Q++++L  F EM          
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 418

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           TY+  ID LCKS  V +   L + +
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 181/361 (50%), Gaps = 7/361 (1%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F +  +    + +    L    +P+++T+++LI G C      +A  L  +     
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    YNT+I GLC  G    AL  + +M          C P+ +TY  ++D LCK  
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-------CAPSVITYTILVDALCKSA 116

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A  +   M +    P+VVTY ++I GFC   + +EA  LF +M++    PDV T++
Sbjct: 117 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK  +    ++LL+ M+  G  PN  TYNTL+D    + K   A  L   M   
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C     ++N +I+ +CK   ++ A  L+  M  +G  P + TYN +  G    ++++ A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L + M       D  TYN+ + GLCK+  V EA E++  +R+  Y L++V+ + LIDG
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356

Query: 508 L 508
           L
Sbjct: 357 L 357


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 229/463 (49%), Gaps = 49/463 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P ++T+
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 90

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +ILI C C+  R+  GF  LG +++  F   A+TFT L+KGLCA+ R  +A  +  +   
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
             +C PDVF+   L+ GLC    +  AL L   MA+G G       P+ V+Y T+I+G  
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSA---PDVVSYTTVINGFF 207

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG   KA   + +M D  I+PDVVTY+S+I   C     ++A  +   M+  GV P+  
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267

Query: 325 TFSVIMDELCKNGKMDKA----------------------------------------SR 344
           T++ IM   C +G+  +A                                          
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHA 327

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+LM+  G++P+ Y YN LI  Y    K+D A  +F  M   G   D V+Y  +I   C
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  VE+A+  + +M+ +G+ P  + YN+L  GL   ++ ERA +L  EM    +  +T 
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 447

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +N+ ID  CK G V+E+ +LF  +     + +I++Y+ LIDG
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 219/445 (49%), Gaps = 36/445 (8%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R   S P V S+  +     K        S +  +    + PD+ T+S +I   CK   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD-----VF 213
                VL  ++++   PN  T+TS++ G C+  +  EA     K R    EPD     + 
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIA 307

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFG-------VVCK---------------- 250
           TY TL+ G    G  +V ++   ++   NG          ++C                 
Sbjct: 308 TYCTLLQGYATKG-ALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366

Query: 251 -------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                  P+ VTY  +I  LCK G V+ A   F +M DE ++P  + Y S+I G C  N 
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           W  A+ L +EM+D+G+  + + F+ I+D  CK G++ ++ +L +LM+  GV P+  TY+T
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LIDGYCL  K+D A KL   M S G   + V+Y TLIN YCK   + +AL L+ EM S G
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           + P ++TYN +  GLF+  +   A +L+  +  +    +  TYN  + GLCK+    +AL
Sbjct: 547 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 606

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            +F+ +     +L   ++N +ID L
Sbjct: 607 RMFQNLCLMDLKLEARTFNIMIDAL 631



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 190/372 (51%), Gaps = 6/372 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           GL PDI T+  L+  +   G +     +L  ++R+   P+   +  LI     + ++ EA
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +F+K R     PD  TY  +I  LC++G    A+  FE+M +          P  + Y
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG------LSPGNIVY 414

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N++I GLC     ++A+EL L+M D  I  + + + S+I   C      E+++LF  M+ 
Sbjct: 415 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 474

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV+PD++T+S ++D  C  GKMD+A +LL  M+  G+ PNT TY TLI+GYC   ++  
Sbjct: 475 IGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGD 534

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  LF  MES+G   D+++YN ++    + +    A  LY  +   G +  + TYN +  
Sbjct: 535 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 594

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +    + AL++F  +    +  +  T+N  ID L K G   EA +LF A   +    
Sbjct: 595 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVP 654

Query: 497 NIVSYNCLIDGL 508
           N  +Y  + + +
Sbjct: 655 NYWTYRLMAENI 666



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 17/421 (4%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSP----PPVSSFNILFGCLAKNKHYDTVLSLFK 131
           SSGQ       P EA+     +      P    P ++++  L    A       + +L  
Sbjct: 278 SSGQ-------PKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
            +   G+ PD Y ++ILI  + K G+V    +V  ++ +    P+AVT+ ++I  LC   
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           R+ +A   F +       P    YN+LI+GLC       A  L  EM +       +C  
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-L 444

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           NT+ +N+IID  CKEG V ++++LF  M    + PD++TY+++I G+C A   +EA +L 
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M+  G++P+ VT+  +++  CK  +M  A  L + M   GV+P+  TYN ++ G   T
Sbjct: 505 SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            +   A++L+V +  +G   ++ +YN +++  CKNK  ++AL ++  +    +K    T+
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N +   L ++ +   A  LF     N +  + +TY    + +   G + E  +LF ++ D
Sbjct: 625 NIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 684

Query: 492 S 492
           +
Sbjct: 685 N 685



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 189/420 (45%), Gaps = 19/420 (4%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP       +NIL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 328 LLDLMVRNGIHPDH---YVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV    +   +++    +P  + + SLI GLC  ++   A  L  +        
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 498

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +L   M    + P+ VTY ++I G+C  +   +A  LF EM   GV PD++T+++I+
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             L +  +   A  L   +   G      TYN ++ G C     D A ++F     N C+
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF----QNLCL 614

Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            D+     ++N +I+   K     EA  L+    S G+ P   TY  +   +     +E 
Sbjct: 615 MDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 674

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +LF  M  N    D+   N  +  L + G +  A      I +  + L   + +  ID
Sbjct: 675 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 734



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 39/287 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +FD M+R+   P  ++   ++ G CLA     D  + L   + S GL P+  T+  LIN 
Sbjct: 468 LFDLMVRIGVKPDIITYSTLIDGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYRTLING 525

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +CK+ R+    V+   +  S  +P+ +T+  +++GL    R   A  L+ +      + +
Sbjct: 526 YCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 585

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEM---------------------ANGNGEF----- 245
           + TYN +++GLC+   T  AL +F+ +                        NGE      
Sbjct: 586 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFV 645

Query: 246 -----GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                G+V  PN  TY  + + +  +G +++  +LFL M+D     D      ++R    
Sbjct: 646 AFSSNGLV--PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 703

Query: 301 ANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLL 346
             +   A   ++ M+D+     +  T S+ +D L   GK  +  R L
Sbjct: 704 RGEITRAGT-YLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFL 748


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 190/319 (59%), Gaps = 10/319 (3%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+ VTFT+L+ GLC E R+++A AL  +      +P    Y T+INGLC+ G T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             +M   +       K + V YN IID LCK+G    A+ LF +M D+ I PDV+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I  FC +  W +A++L  +M+++ + PDVVTFS +++ L K GK+ +A  +   M+ RG+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P T TYN++IDG+C  D+++ A+++  SM S  C  DVV+++TLIN YCK K V+  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++ EM  +GI    VTY TL  G  ++  ++ A  L + M  + VA +  T+ + +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 475 KSGFVLEALELFRAIRDSK 493
               + +A  +   ++ S+
Sbjct: 298 SKKELRKAFAILEDLQKSE 316



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 177/321 (55%), Gaps = 10/321 (3%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PD+ T + L+N  C  GRV     ++ R++     P    + ++I GLC       A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L +K      +  V  YN +I+ LC+ GH I A NLF EM +  G F     P+ +TY
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIF-----PDVITY 114

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + +ID  C+ G    A++L   M +  INPDVVT++++I         +EA+ ++ +M+ 
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G+ P  +T++ ++D  CK  +++ A R+L+ M  +  +P+  T++TLI+GYC   ++D+
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             ++F  M   G + + V+Y TLI+ +C+  D++ A  L + M+S G+ P  +T+ ++  
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294

Query: 437 GLFEIHQVERALKLFDEMRRN 457
            L    ++ +A  + ++++++
Sbjct: 295 SLCSKKELRKAFAILEDLQKS 315



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 14/297 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D M+     P     +  +   L K    ++ L+L  ++    +   +  ++ +
Sbjct: 28  QALALVDRMVEEGHQP-----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAI 82

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G   H   +   +      P+ +T++ +I   C   R  +A  L         
Sbjct: 83  IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV T++ LIN L + G    A  ++ +M    G F     P T+TYN++IDG CK+  
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLR-RGIF-----PTTITYNSMIDGFCKQDR 196

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++ AK +   M  ++ +PDVVT++++I G+C A   +    +F EM  +G+  + VT++ 
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++   C+ G +D A  LL +MI  GV PN  T+ +++   C   ++   RK F  +E
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL---RKAFAILE 310



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 31/260 (11%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP----------------- 321
           M +    PDVVT+T+++ G C      +A  L   M+++G QP                 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60

Query: 322 --------------DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
                          VV ++ I+D LCK+G    A  L   M  +G+ P+  TY+ +ID 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +C + +   A +L   M       DVV+++ LIN   K   V EA  +Y +ML +GI PT
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            +TYN++  G  +  ++  A ++ D M     + D  T++  I+G CK+  V   +E+F 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +       N V+Y  LI G
Sbjct: 241 EMHRRGIVANTVTYTTLIHG 260



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 1/156 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  I+  MLR    P  ++ +N +     K    +    +   + S    PD+ T S 
Sbjct: 163 SEAEEIYGDMLRRGIFPTTIT-YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +CK  RV +G  +   + R     N VT+T+LI G C    +  A  L        
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
             P+  T+ +++  LC       A  + E++    G
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 209/379 (55%), Gaps = 14/379 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S++IL   L+ +       +LF  +  +   PDI T+++L++ +CK+G+      +
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSL 230

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  IL++ + PN  T++ +I   C   ++ EA  +F K     C P+  T+NTLI G C+
Sbjct: 231 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 290

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELFLKMKDEN 283
            G    A+ LF EM        + CK   VTYNT+ID LCK+ G V  A +LF K++   
Sbjct: 291 AGMLEDAIKLFAEMEK------IGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P +VTY S+I+GFC A   +EA + F EM +    P+V+T+S+++D LCK  +M +A+
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAA 403

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           + LE M   G  P   TY  LI+G+C   ++  A   F  M+  GC  + V +NTLI+  
Sbjct: 404 KTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGL 463

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK +   + L L   M ++G KP V+TYN L  GL   ++VE A +LFD M     A + 
Sbjct: 464 CKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNV 520

Query: 464 YTYNNFIDGLCKSGFVLEA 482
            T+N  I GLC    V EA
Sbjct: 521 TTFNFLIRGLCAQKKVEEA 539



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 181/349 (51%), Gaps = 11/349 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N+L     K        SL K +  AG  P+++T+SI+INC+CK+ +V   + V
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ S   PNAVTF +LI G C    + +A  LF +     C+  + TYNTLI+ LC+
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 225 T-GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A++LF ++       G    P  VTYN++I G C    + +A + F +M+ + 
Sbjct: 326 KRGGVYTAVDLFNKLE------GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK- 378

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+V+TY+ +I G C      EA +   +M   G  P VVT+  +++  CK G++  A 
Sbjct: 379 CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSAL 438

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
              E M   G  PNT  +NTLIDG C  ++ +   +L   M + GC  DV++YN LI+  
Sbjct: 439 LFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGL 498

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           C    VE+A  L+  M      P V T+N L  GL    +VE A  + D
Sbjct: 499 CSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 214/435 (49%), Gaps = 46/435 (10%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           N L   L   + +D  L LFK +  AGLF P+ +T+++LI  FCK G++     V   + 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            S   PNA T  +L+ GLC   ++  A  LF + +     P   ++N L+ G    G   
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE----GFVDKAKELFLKMKDENI- 284
            AL   ++M   +          T TYN ++ GLC E      +++A E F +MK   + 
Sbjct: 120 DALAHLQDMRKSSSSVA------TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173

Query: 285 -------------------------------NPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
                                          +PD++TY  ++ G+C      EA+ L  E
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           ++  G +P+V T+S+I++  CK  K+++A  +   MI     PN  T+NTLI G+C    
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK-DVEEALSLYSEMLSKGIKPTVVTYN 432
           ++ A KLF  ME  GC   +V+YNTLI+  CK +  V  A+ L++++   G+ PT+VTYN
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +L  G  +  ++  A++ FDEM     A +  TY+  IDGLCK   + EA +    ++  
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412

Query: 493 KYELNIVSYNCLIDG 507
            Y   +V+Y  LI+G
Sbjct: 413 GYTPTVVTYGGLING 427



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 209/478 (43%), Gaps = 86/478 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+ N L   L +     + L LF+ + +    P   +H+IL+  F   GRV      
Sbjct: 65  PNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAH 124

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAE---------------------------------- 190
           L  + +S  +    T+  ++KGLC E                                  
Sbjct: 125 LQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLS 184

Query: 191 -----SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
                 R+ EA ALF+      C PD+ TYN L++G C+ G T  A +L +E+     E 
Sbjct: 185 ALSDSGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE- 240

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
                PN  TY+ II+  CK   V++A E+F+KM + N  P+ VT+ ++I GFC A    
Sbjct: 241 -----PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKN-----------GKMDKAS----------- 343
           +A +LF EM   G +  +VT++ ++D LCK             K++ A            
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 355

Query: 344 --------RLLELMIW-----RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
                   RL E M +         PN  TY+ LIDG C   ++  A K    M+++G  
Sbjct: 356 IQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
             VV+Y  LIN +CK  +++ AL  + +M   G  P  V +NTL  GL +  +    L+L
Sbjct: 416 PTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRL 475

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              M       D  TYN  I GLC +  V +A  LF  +  +    N+ ++N LI GL
Sbjct: 476 LCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAP---NVTTFNFLIRGL 530



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 11/198 (5%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  +    +EA+  FD M       P V +++IL   L K +         + + + G 
Sbjct: 357 QGFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGY 414

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P + T+  LIN FCK G +    +   ++  +   PN V F +LI GLC   R  +   
Sbjct: 415 TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L        C+PDV TYN LI+GLC       A  LF+ MA         C PN  T+N 
Sbjct: 475 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---------CAPNVTTFNF 525

Query: 259 IIDGLCKEGFVDKAKELF 276
           +I GLC +  V++A+ + 
Sbjct: 526 LIRGLCAQKKVEEARNIL 543



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 4/186 (2%)

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  L    K D+A RL + ++     PN +TYN LI G+C   ++  A  +F  M+S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G + +  + NTL+   C+   +  AL L+ EM +    PT  ++N L  G F   +V  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLC---KSGFVLE-ALELFRAIRDSKYELNIVSYN 502
           AL    +MR++  +  T TYN  + GLC   KS   LE A+E F+ ++ S  E ++ SY+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 503 CLIDGL 508
            L+  L
Sbjct: 181 ILLSAL 186



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 3/139 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           ++ H   P V ++  L     K     + L  F+++  AG  P+    + LI+  CK  R
Sbjct: 409 MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAER 468

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
            + G  +L  +      P+ +T+  LI GLC+ +R+ +A  LF      AC P+V T+N 
Sbjct: 469 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDG---MACAPNVTTFNF 525

Query: 218 LINGLCRTGHTIVALNLFE 236
           LI GLC       A N+ +
Sbjct: 526 LIRGLCAQKKVEEARNILD 544


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 225/424 (53%), Gaps = 12/424 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDIYT 144
           P++A+ +F+ M       P + ++N +   L K+ + +    L + +   G    PDI T
Sbjct: 113 PDQAVKLFENM-ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++ LIN F +  R+        ++  +   P+ +T   L+ G+C +  + EA  +    +
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +    PDV TYN++I+ LC  G  + A  + + M+         C P+ VT+NT++DG C
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---------CSPDLVTFNTLLDGFC 282

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G + +A E+  +M  ENI PDV+TYT ++ G C       A  L  E++ QG  PDV+
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            ++ ++D LCK+G++++A +L++ M  RG       Y++L+ GYC    +  AR++   M
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S   +  + +YN ++    K+  + +A+SL S+++++G  P VVTYNTL  GL + ++V
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A  L DEM       +  T  + + GLC+ G V +A  L   +   ++  N+V Y  L
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 522

Query: 505 IDGL 508
           IDGL
Sbjct: 523 IDGL 526



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 229/464 (49%), Gaps = 26/464 (5%)

Query: 35  TSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEAL--- 91
           +S +     +Y T  S L +S  L        ++ L+E  +  G+   +++T N  +   
Sbjct: 125 SSRVKPEIVTYNTVISGLCKSGNLE-----KARELLEEMIRKGGKSAPDIVTYNTLINAF 179

Query: 92  ---------CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
                    C F   ++     P V + NIL   + K+   +  L +   +  AG  PD+
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            T++ +I+  C  G+V     +L  +  SC +P+ VTF +L+ G C    +  A  +  +
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTM--SC-SPDLVTFNTLLDGFCKAGMLPRALEVLEE 296

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  PDV TY  L+NGLCR G   VA  L EE+       G +  P+ + Y +++DG
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ----GYI--PDVIAYTSLVDG 350

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK G +++A +L  +M        VV Y+S++ G+C A + ++A+ +  EM+   + P 
Sbjct: 351 LCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPP 410

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           + T+++++  L K+G + KA  L+  ++ RG  P+  TYNTLIDG C  +++  A  L  
Sbjct: 411 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD 470

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M S GC  + V+  +++   C+   V++A SL  EM  K   P VV Y +L  GL +  
Sbjct: 471 EMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 530

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +++ A  + D MR   VA D + Y   I  +   G V EA+ ++
Sbjct: 531 RMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMY 574



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 215/457 (47%), Gaps = 42/457 (9%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+  FD+          V S+N L   L K+ H+     ++K L  +G  P++ T  
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI   CK G+       L  +      P+   F  LI GL  +    +A  LF      
Sbjct: 67  ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID----- 261
             +P++ TYNT+I+GLC++G+   A  L EEM    G+      P+ VTYNT+I+     
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGK----SAPDIVTYNTLINAFYRA 182

Query: 262 ------------------------------GLCKEGFVDKAKELFLKMKDENINPDVVTY 291
                                         G+CK+G V++A E+   MK     PDV+TY
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            S+I   C A    EA  +   M      PD+VTF+ ++D  CK G + +A  +LE M  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
             + P+  TY  L++G C   ++  A  L   +   G + DV++Y +L++  CK+ ++EE
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  L  EM  +G +  VV Y++L  G      V +A ++  EM   ++    +TYN  + 
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLG 419

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GL K G + +A+ L   +    Y  ++V+YN LIDGL
Sbjct: 420 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 6/338 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +L+     P + +FN L     K       L + + +    + PD+ T++IL+N  C++G
Sbjct: 261 ILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +V   F +L  I+R  + P+ + +TSL+ GLC    I EA  L  +  V  C   V  Y+
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +L++G CR G+   A  +  EM + N        P   TYN ++ GL K+G + KA  L 
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSIN------MVPPLFTYNIVLGGLIKDGSISKAVSLI 434

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             +      PDVVTY ++I G C AN   EA  L  EM  +G  P+ VT   ++  LC+ 
Sbjct: 435 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRV 494

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++D A  L+  M  +   PN   Y +LIDG C +D++D A  +  +M   G   D  +Y
Sbjct: 495 GRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAY 554

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             LI        V EA+++Y EM+++G  P   T  TL
Sbjct: 555 RKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 213/402 (52%), Gaps = 11/402 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V++FN     L K         L  R+   G  P+ +T+ +L++  C+MG+V    ++
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLC 223
           L ++      PN V F +LI G  +  R+ EA A+  +  +   C PD+FTYNTLI GLC
Sbjct: 363 LNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+ + A  L  EM          C+PN +TY  +ID  CKEG +++A+ +  +M  + 
Sbjct: 419 KKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  + V Y  +I   C      +A  +F +M  +G +PD+ TF+ ++  LCK  K ++A 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M+  GV  NT TYNTLI  +     +  A KL   M   GC  D ++YN LI   
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+  ++E+ L+L+ +M+SKG+ P  ++ N L  GL     ++ AL+   +M    +  D 
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 652

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            TYN+ I+GLCK+G   EAL LF  ++      + ++YN LI
Sbjct: 653 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 694



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/430 (32%), Positives = 215/430 (50%), Gaps = 16/430 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G+   + PN    +F  ML    SP  V +F ++   L      D+  +L K +   G  
Sbjct: 213 GNCPKVVPN----VFYEMLSKGISPT-VYTFGVVMKALCLVNEVDSACALLKDMTRHGCV 267

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+   +  LI+   K+GRV+    +L  +L     P+  TF   I GLC   RI EAA L
Sbjct: 268 PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 327

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +  +    P+ FTY  L++GLCR G    A  L  ++ N          PN V +NT+
Sbjct: 328 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVVLFNTL 377

Query: 260 IDGLCKEGFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I+G    G +D+AK +  + M      PD+ TY ++I G C       A+ L  EM  +G
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +P+V+T+++++D  CK G++++A  +L+ M  +G+  N   YN LI   C  +K+  A 
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 497

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +F  M S GC  D+ ++N+LI   CK    EEAL LY +ML +G+    +TYNTL    
Sbjct: 498 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 557

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
                ++ ALKL ++M       D  TYN  I  LC++G + + L LF  +       N 
Sbjct: 558 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617

Query: 499 VSYNCLIDGL 508
           +S N LI+GL
Sbjct: 618 ISCNILINGL 627



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 219/425 (51%), Gaps = 9/425 (2%)

Query: 84  LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           L+   ++ C     +  H   P    +  L   L+K    + VL L + +   G  PD+ 
Sbjct: 247 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T +  I+  CKM R+     ++ R+L   FTPN+ T+  L+ GLC   ++ EA  L  K 
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK- 365

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 P+V  +NTLING    G    A  +  E         V C P+  TYNT+I GL
Sbjct: 366 ---VPNPNVVLFNTLINGYVSRGRLDEAKAVMHE-----SMLSVGCGPDIFTYNTLILGL 417

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK+G++  A+EL  +M+ +   P+V+TYT +I  FC      EA+ +  EM  +G+  + 
Sbjct: 418 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V ++ ++  LCK+ K+  A  +   M  +G  P+ +T+N+LI G C  +K + A  L+  
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G + + ++YNTLI+ + +   ++EAL L ++ML +G     +TYN L   L     
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +E+ L LF++M    +  +  + N  I+GLC++G +  ALE  R +       +IV+YN 
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657

Query: 504 LIDGL 508
           LI+GL
Sbjct: 658 LINGL 662



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 215/423 (50%), Gaps = 11/423 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +A  +   M  ++   P   S+N++   L        V ++F  + S G+ P +YT  
Sbjct: 180 PGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFG 239

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++   C +  V     +L  + R    PNA+ + +LI  L    R+ E   L  +  + 
Sbjct: 240 VVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLM 299

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDV T+N  I+GLC+      A  L + M            PN+ TY  ++ GLC+ 
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLCRM 353

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVT 325
           G VD+A+ L  K+     NP+VV + ++I G+      +EAK +  E M+  G  PD+ T
Sbjct: 354 GKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 409

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LCK G +  A  L+  M  +G  PN  TY  LID +C   +++ AR +   M 
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   + V YN LI+  CK++ V++AL+++ +M SKG KP + T+N+L  GL ++++ E
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL L+ +M    V A+T TYN  I    + G + EAL+L   +      L+ ++YN LI
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589

Query: 506 DGL 508
             L
Sbjct: 590 KAL 592



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 159/335 (47%), Gaps = 29/335 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K  +  +   L   +   G  P++ T++ILI+ FCK GR+     V
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +       NAV +  LI  LC + ++ +A  +F       C+PD+FT+N+LI GLC+
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 225 TGHTIVALNLFEEM------ANG-----------------------NGEFGVVCKPNTVT 255
                 AL L+++M      AN                        N      C  + +T
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I  LC+ G ++K   LF  M  + +NP+ ++   +I G C   +   A     +M+
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 644

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+ PD+VT++ +++ LCK G+  +A  L + +   G+ P+  TYNTLI  +C     D
Sbjct: 645 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 704

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            A  L      +G + + V++  L++ + K  D E
Sbjct: 705 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 118/275 (42%), Gaps = 33/275 (12%)

Query: 265 KEGFVDKAKELFLKMKD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           + G   +A  L L M+   +  P   +Y  V+      N       +F EM+ +G+ P V
Sbjct: 176 RAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTV 235

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            TF V+M  LC   ++D A  LL+ M   G  PN   Y TLI       +++   KL   
Sbjct: 236 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEE 295

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   GC+ DV ++N  I+  CK   + EA  L   ML +G  P   TY  L  GL  + +
Sbjct: 296 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 355

Query: 444 VERALKLFDEMRRNHV--------------------------------AADTYTYNNFID 471
           V+ A  L +++   +V                                  D +TYN  I 
Sbjct: 356 VDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           GLCK G+++ A EL   ++    E N+++Y  LID
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 450



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 40/254 (15%)

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL--- 346
            Y  +I     A ++     L ++M  +G+      F +IM    + G   +A+RLL   
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 347 ---------------------------------ELMIWRGVNPNTYTYNTLIDGYCLTDK 373
                                              M+ +G++P  YT+  ++   CL ++
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A  L   M  +GC+ + + Y TLI+   K   V E L L  EML  G  P V T+N 
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
              GL ++ ++  A KL D M       +++TY   + GLC+ G V EA  L   + +  
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP- 369

Query: 494 YELNIVSYNCLIDG 507
              N+V +N LI+G
Sbjct: 370 ---NVVLFNTLING 380


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 220/427 (51%), Gaps = 13/427 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  IF+ M       P V ++  +   L K+   D  + L   +N  G  P++ T+S+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CK GR   GF +L  + R  F P+ + + +L+ GLC   R+ EA  L        
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TYN+L+   CR+     A  L + M+    E G  C P+ + YNT+I GLC++ 
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS----ERG--CPPDVINYNTVIAGLCRDA 290

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFC----YANDWN-EAKRLFIEMMDQ-GVQP 321
            +D A+ L  +M      PDV+TY+++I G C       DW  EA    +EMM Q G  P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +  T++V+++ LC+  K  +A  LL  MI   V P+  +++ +I   C +  +D A K+F
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIF 410

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M    C  + V+Y  LI+   K  +V++A+ ++ E++ +  +P V TYN++  GL  +
Sbjct: 411 GMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGV 469

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++E A+++ + M       D  +Y   I GLC+   V EA ELF+A+    + + +  Y
Sbjct: 470 GRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVY 529

Query: 502 NCLIDGL 508
           N L++ L
Sbjct: 530 NVLVNEL 536



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 215/405 (53%), Gaps = 14/405 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            N     L +   +   + LF+        P+ +T+  LI+  CK G++   + +L  + 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P       +I+GLC   R  +A   F       C PD+ T+N L++ L ++G   
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +FE M   +      C PN VTY T+I+GLCK+G +D+A EL   M +    P+V+
Sbjct: 118 EAFQIFESMHTSSQ-----CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY+ ++ G C A   ++   L  EM  +G QPDV+ ++ +++ LCK+ ++D+A  L++LM
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G  P   TYN+L++ +C + ++D A +L   M   GC  DV++YNT+I   C++  +
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV------ERALKLFDEMRRNHVAADT 463
           ++A +L  +M++    P V+TY+T+  GL +  +V      E A ++ + M++     + 
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   I+GLC++    +AL L R + DS+   ++ S++ +I  L
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 13/419 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           + R     P   ++  L   L K    D    L   +   G+ P +  H+ +I   CK G
Sbjct: 20  LFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAG 79

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKHRVFACEPDVFTY 215
           R          +  +  TP+ +TF  L+  L    R+ EA  +F + H    C P+V TY
Sbjct: 80  RFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            T+INGLC+ G    A+ L + M N  G     C PN +TY+ +++GLCK G  DK   L
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLM-NETG-----CCPNVITYSVLVEGLCKAGRTDKGFTL 193

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +M      PDV+ Y +++ G C +   +EA  L   M+  G  P VVT++ +M+  C+
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + ++D+A RL+++M  RG  P+   YNT+I G C   ++D A+ L   M +  C+ DV++
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313

Query: 396 YNTLINWYCKNKDV------EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           Y+T+I+  CK+  V      E A  +   M   G  P   TY  +  GL    + ++AL 
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L   M  + V  D  +++  I  LCKS  +  A ++F  + + + + N V+Y  LIDGL
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 216/429 (50%), Gaps = 17/429 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  + D M R    PP V+  N +   L K   +   L  FK +      PDI T +I
Sbjct: 47  DQAYELLDEM-RDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105

Query: 148 LINCFCKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           L++   K GRV   F +   +  S  C  PN VT+T++I GLC + ++  A  L      
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C P+V TY+ L+ GLC+ G T     L +EM     +      P+ + YNT+++GLCK
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCK 218

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+A EL   M      P VVTY S++  FC +   + A RL   M ++G  PDV+ 
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS-- 383
           ++ ++  LC++ ++D A  LL+ M+     P+  TY+T+IDG C   ++D   KL  +  
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 384 ----MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
               M+  GC  +  +Y  +I   C+ +  ++AL+L   M+   + P + +++ +   L 
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           + H ++ A K+F  M       +   Y   IDGL K G V +A+ +F  + +S +   + 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVA 457

Query: 500 SYNCLIDGL 508
           +YN ++DGL
Sbjct: 458 TYNSVLDGL 466



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 46/361 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   L K++  D  L L + +  +G +P + T++ L+  FC+  +V   F +
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      P+ + + ++I GLC ++R+ +A AL  +     C PDV TY+T+I+GLC+
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323

Query: 225 TGHTIVALNL-----FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
                    L       EM    G     C PN  TY  +I+GLC+     +A  L  +M
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTG-----CPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            D  + PD+ +++ VI   C ++D + A ++F  M ++  +P+ V ++ ++D L K G++
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK-------------------- 379
           DKA R+ ELM+     P   TYN+++DG C   +I+ A +                    
Sbjct: 439 DKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 380 ---------------LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
                          LF ++E+ G   +V  YN L+N  CK K + +A  + ++++  G 
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557

Query: 425 K 425
           K
Sbjct: 558 K 558


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 233/479 (48%), Gaps = 20/479 (4%)

Query: 34  PTSSISENEPSYPTTTSKLKES-LRLTVKDRASLKKFLKERCKSSGQ--GDINLITPNEA 90
           PT + S   PS PTT      S L       A+    +  R  S+ +  G +      EA
Sbjct: 19  PTFASSHPYPSLPTTKPLTPNSRLNFAHAGVAASPNAVPHRAVSNDRLRGLVRRGDLEEA 78

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           L + + M  + PS  P     ++    A  +  +       R   A   PD+  ++ ++ 
Sbjct: 79  LRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEA------RRVLAACEPDVMAYNAMVA 132

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +C  G++     ++  +      P++ T+ +LI+GLC   R   A  +        C P
Sbjct: 133 GYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP 189

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           DV TY  L+   C+      A+ L +EM A G       C P+ +TYN +++G+C+EG V
Sbjct: 190 DVVTYTILLEATCKRSGYKQAMKLLDEMRAKG-------CAPDIITYNVVVNGICQEGRV 242

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A E    +      P+ V+Y  V++G C A  W +A++L  EM  +G  P+VVTF+++
Sbjct: 243 DDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNML 302

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LC+ G ++ A  +L+ +   G  PN+ +YN ++  +C   K+D A      M S GC
Sbjct: 303 ISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGC 362

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D+VSYNTL+   C+  +V+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+
Sbjct: 363 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALE 422

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L +EM    +  D  TY+    GLC+   + EA+  F  ++D     N V YN ++ GL
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 210/404 (51%), Gaps = 9/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +          D    L   +    + PD YT++ LI   C  GR  +  VV
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVV 178

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +LR    P+ VT+T L++  C  S   +A  L  + R   C PD+ TYN ++NG+C+
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+   + + +        C+PNTV+YN ++ GLC     + A++L  +M  +  
Sbjct: 239 EGRVDDAIEFLKSLPSHG------CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY 292

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVT+  +I   C       A  +  ++   G  P+ ++++ I+   CK  KMD+A  
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +ELM+ RG  P+  +YNTL+   C   ++D A +L   ++  GC   ++SYNT+I+   
Sbjct: 353 FVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 412

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EAL L +EM++KG++P ++TY+T+  GL    ++E A++ F +++   +  +T 
Sbjct: 413 KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTV 472

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  + GLCK      A++LF  +  +    N  +Y  LI+GL
Sbjct: 473 LYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 184/365 (50%), Gaps = 7/365 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D MLR     P V ++ IL     K   Y   + L   + + G  PDI T+++++
Sbjct: 175 ALVVLDDMLR-RGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVV 233

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  C+ GRV      L  +      PN V++  ++KGLC   R  +A  L  +       
Sbjct: 234 NGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP 293

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V T+N LI+ LCR G    A+ + +++     ++G  C PN+++YN I+   CK+  +
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIP----KYG--CTPNSLSYNPILHAFCKQKKM 347

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A      M      PD+V+Y +++   C   + + A  L  ++ D+G  P +++++ +
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GK  +A  LL  M+ +G+ P+  TY+T+  G C  D+I+ A + F  ++  G 
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGI 467

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V YN ++   CK ++   A+ L+  M+S G  P   TY  L  GL     V+ A +
Sbjct: 468 RPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARE 527

Query: 450 LFDEM 454
           L  E+
Sbjct: 528 LLGEL 532


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 237/460 (51%), Gaps = 37/460 (8%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + +++ +   L K +      +  +++ + G+
Sbjct: 236 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD +T++ LI  +   G+      V   + R    P+ VT   L+  LC   +I EA  
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGVV---- 248
           +F    +    PDVF+Y  ++NG    G  +   +LF+ M  G+G       F V+    
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFSVLIKAY 408

Query: 249 --------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                                KP+ VTY T+I  LC+ G +D A E F +M D+ + PD 
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 468

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  +I+GFC      +AK L +E+M+ G++ D+V FS I++ LCK G++  A  + +L
Sbjct: 469 YAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            +  G +P+   Y+ L+DGYCL  K++ A ++F +M S G   +VV Y TL+N YCK   
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++E LSL+ EML KGIKP+ + YN +  GLF   +   A   F EM  + +A +  TYN 
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNI 648

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + G  K+    EA+ LF+ +R    +++I++ N +I G+
Sbjct: 649 VLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/428 (32%), Positives = 214/428 (50%), Gaps = 55/428 (12%)

Query: 127 LSLFKRLNSAG-----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           ++LF R  S       L P  +T++IL++C  +  R        G++LR+    + +   
Sbjct: 95  VALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIAN 154

Query: 182 SLIKGLCAESRIMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            L+KG C   R  EA  +   HR     C PDVF+Y+ L+  LC  G +  A +L   MA
Sbjct: 155 HLLKGFCEAKRTDEALDILL-HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 213

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
            G    G VC P+ V Y T+ID   KEG V+KA +LF +M    I PD+VTY+SV+   C
Sbjct: 214 EG----GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALC 269

Query: 300 YA-----------------------------------NDWNEAKRLFIEMMDQGVQPDVV 324
            A                                     W EA R+F EM    + PDVV
Sbjct: 270 KARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 329

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKL 380
           T +++M  LCK GK+ +A  + + M  +G NP+ ++Y  +++GY    CL D  D    L
Sbjct: 330 TLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD----L 385

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M  +G   D+ +++ LI  Y     +++A+ +++EM   G+KP VVTY T+   L  
Sbjct: 386 FDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           I +++ A++ F++M    VA D Y Y+  I G C  G +L+A EL   I ++   L+IV 
Sbjct: 446 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVF 505

Query: 501 YNCLIDGL 508
           ++ +I+ L
Sbjct: 506 FSSIINNL 513



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 23/419 (5%)

Query: 47  TTTSKLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           ++T + KE++R+         + D  +L   +   CK    G I      EA  +FD M 
Sbjct: 304 SSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK---YGKIK-----EARDVFDTM- 354

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
            M    P V S+ I+    A       +  LF  +   G+ PDIYT S+LI  +   G +
Sbjct: 355 AMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGML 414

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   +      P+ VT+T++I  LC   ++ +A   F +       PD + Y+ L
Sbjct: 415 DKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 474

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  E+ N NG      + + V +++II+ LCK G +  A+ +F  
Sbjct: 475 IQGFCTHGSLLKAKELILEIMN-NG-----MRLDIVFFSSIINNLCKLGRIMDAQNIFDL 528

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             +   +PD V Y+ ++ G+C      +A R+F  M+  G++P+VV +  +++  CK G+
Sbjct: 529 TVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGR 588

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+   L   M+ +G+ P+T  YN +IDG  +  +   A+  F  M  +G   +  +YN 
Sbjct: 589 IDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNI 648

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           ++  + KN+  +EA+ L+ E+ +  +K  ++T NT+  G+F+  +VE A  LF  + R+
Sbjct: 649 VLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 707


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 220/427 (51%), Gaps = 13/427 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  IF+ M       P V ++  +   L K+   D  + L   +N  G  P++ T+S+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CK GR   GF +L  + R  F P+ + + +L+ GLC   R+ EA  L        
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TYN+L+   CR+     A  L + M+    E G  C P+ + YNT+I GLC++ 
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS----ERG--CPPDVINYNTVIAGLCRDA 290

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFC----YANDWN-EAKRLFIEMMDQ-GVQP 321
            +D A+ L  +M      PDV+TY+++I G C       DW  EA    +EMM Q G  P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +  T++V+++ LC+  K  +A  LL  MI   V P+  +++ +I   C +  +D A K+F
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIF 410

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M    C  + V+Y  LI+   K  +V++A+ ++ E++ +  +P V TYN++  GL  +
Sbjct: 411 GMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGV 469

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++E A+++ + M       D  +Y   I GLC+   V EA ELF+A+    + + +  Y
Sbjct: 470 GRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVY 529

Query: 502 NCLIDGL 508
           N L++ L
Sbjct: 530 NVLVNEL 536



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 215/405 (53%), Gaps = 14/405 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            N     L +   +   + LF+        P+ +T+  LI+  CK G++   + +L  + 
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P       +IKGLC   R  +A   F       C PD+ T+N L++ L ++G   
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +FE M   +      C PN VTY T+I+GLCK+G +D+A EL   M +    P+V+
Sbjct: 118 EAFQIFESMHTSSQ-----CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY+ ++ G C A   ++   L  EM  +G QPDV+ ++ +++ LCK+ ++D+A  L++LM
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G  P   TYN+L++ +C + ++D A +L   M   GC  DV++YNT+I   C++  +
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV------ERALKLFDEMRRNHVAADT 463
           ++A +L  +M++    P V+TY+T+  GL +  +V      E A ++ + M++     + 
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   I+GLC++    +AL L R + DS+   ++ S++ +I  L
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 207/419 (49%), Gaps = 13/419 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           + R     P   ++  L   L K    D    L   +   G+ P +  H+ +I   CK G
Sbjct: 20  LFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAG 79

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-TKHRVFACEPDVFTY 215
           R          +  +  TP+ +TF  L+  L    R+ EA  +F + H    C P+V TY
Sbjct: 80  RFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            T+INGLC+ G    A+ L + M N  G     C PN +TY+ +++GLCK G  DK   L
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLM-NETG-----CCPNVITYSVLVEGLCKAGRTDKGFTL 193

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +M      PDV+ Y +++ G C +   +EA  L   M+  G  P VVT++ +M+  C+
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + ++D+A RL+++M  RG  P+   YNT+I G C   ++D A+ L   M +  C+ DV++
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313

Query: 396 YNTLINWYCKNKDV------EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           Y+T+I+  CK+  V      E A  +   M   G  P   TY  +  GL    + ++AL 
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L   M  + V  D  +++  I  LCKS  +  A ++F  + + + + N V+Y  LIDGL
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 216/429 (50%), Gaps = 17/429 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  + D M R    PP V+  N +   L K   +   L  FK +      PDI T +I
Sbjct: 47  DQAYELLDEM-RDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105

Query: 148 LINCFCKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           L++   K GRV   F +   +  S  C  PN VT+T++I GLC + ++  A  L      
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C P+V TY+ L+ GLC+ G T     L +EM     +      P+ + YNT+++GLCK
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCK 218

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+A EL   M      P VVTY S++  FC +   + A RL   M ++G  PDV+ 
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS-- 383
           ++ ++  LC++ ++D A  LL+ M+     P+  TY+T+IDG C   ++D   KL  +  
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 384 ----MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
               M+  GC  +  +Y  +I   C+ +  ++AL+L   M+   + P + +++ +   L 
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           + H ++ A K+F  M       +   Y   IDGL K G V +A+ +F  + +S +   + 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVA 457

Query: 500 SYNCLIDGL 508
           +YN ++DGL
Sbjct: 458 TYNSVLDGL 466



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 46/361 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   L K++  D  L L + +  +G +P + T++ L+  FC+  +V   F +
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      P+ + + ++I GLC ++R+ +A AL  +     C PDV TY+T+I+GLC+
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323

Query: 225 TGHTIVALNL-----FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
                    L       EM    G     C PN  TY  +I+GLC+     +A  L  +M
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTG-----CPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            D  + PD+ +++ VI   C ++D + A ++F  M ++  +P+ V ++ ++D L K G++
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK-------------------- 379
           DKA R+ ELM+     P   TYN+++DG C   +I+ A +                    
Sbjct: 439 DKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 380 ---------------LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
                          LF ++E+ G   +V  YN L+N  CK K + +A  + ++++  G 
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557

Query: 425 K 425
           K
Sbjct: 558 K 558


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 130  FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            F  +   G+ PD   ++ LI+ FCK G +         +     TP+ +T+T++I G C 
Sbjct: 782  FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841

Query: 190  ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
               ++EA  LF +      EPD  T+  LING C+ GH   A  +   M          C
Sbjct: 842  IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------C 895

Query: 250  KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             PN VTY T+IDGLCKEG +D A EL  +M    + P++ TY S++ G C + +  EA +
Sbjct: 896  SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            L  E    G+  D VT++ +MD  CK+G+MDKA  +L+ M+ +G+ P   T+N L++G+C
Sbjct: 956  LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015

Query: 370  LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            L   ++   KL   M + G   +  ++N+L+  YC   +++ A ++Y +M S+G+ P   
Sbjct: 1016 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075

Query: 430  TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            TY  L  G  +   ++ A  LF EM+    +    TY+  I G  K    LEA E+F  +
Sbjct: 1076 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135

Query: 490  R 490
            R
Sbjct: 1136 R 1136



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 206/383 (53%), Gaps = 7/383 (1%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            EA   F  M+R    P  V  +  L     K          F  ++S  + PD+ T++ +
Sbjct: 777  EAEEAFSEMIRQGILPDTVV-YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            I+ FC++G +     +   +      P++VTFT LI G C    + +A  +        C
Sbjct: 836  ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 895

Query: 209  EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             P+V TY TLI+GLC+ G    A  L  EM      + +  +PN  TYN+I++GLCK G 
Sbjct: 896  SPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKSGN 949

Query: 269  VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +++A +L  + +   +N D VTYT+++  +C + + ++A+ +  EM+ +G+QP +VTF+V
Sbjct: 950  IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +M+  C +G ++   +LL  M+ +G+ PN  T+N+L+  YC+ + +  A  ++  M S G
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069

Query: 389  CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               D  +Y  L+  +CK ++++EA  L+ EM  KG   +V TY+ L  G  +  +   A 
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 1129

Query: 449  KLFDEMRRNHVAADTYTYNNFID 471
            ++FD+MRR  +AAD   ++ F D
Sbjct: 1130 EVFDQMRREGLAADKEIFDFFSD 1152



 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 214/412 (51%), Gaps = 6/412 (1%)

Query: 97   MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
            ++ +    P V S++ +     +    D V  L + +   GL P+ Y +  +I   C++ 
Sbjct: 714  LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773

Query: 157  RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            +++        ++R    P+ V +T+LI G C    I  A+  F +       PDV TY 
Sbjct: 774  KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833

Query: 217  TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
             +I+G C+ G  + A  LF EM      F    +P++VT+  +I+G CK G +  A  + 
Sbjct: 834  AIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887

Query: 277  LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
              M     +P+VVTYT++I G C   D + A  L  EM   G+QP++ T++ I++ LCK+
Sbjct: 888  NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 947

Query: 337  GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            G +++A +L+      G+N +T TY TL+D YC + ++D A+++   M   G    +V++
Sbjct: 948  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007

Query: 397  NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            N L+N +C +  +E+   L + ML+KGI P   T+N+L       + ++ A  ++ +M  
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067

Query: 457  NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              V  D  TY N + G CK+  + EA  LF+ ++   + +++ +Y+ LI G 
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 176/333 (52%), Gaps = 6/333 (1%)

Query: 176  NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
            N  ++  +I  +C   RI EA  L     +    PDV +Y+T++NG CR G       L 
Sbjct: 688  NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 236  EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            E M           KPN+  Y +II  LC+   + +A+E F +M  + I PD V YT++I
Sbjct: 748  EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801

Query: 296  RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
             GFC   D   A + F EM  + + PDV+T++ I+   C+ G M +A +L   M  +G+ 
Sbjct: 802  DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861

Query: 356  PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            P++ T+  LI+GYC    +  A ++   M   GC  +VV+Y TLI+  CK  D++ A  L
Sbjct: 862  PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921

Query: 416  YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
              EM   G++P + TYN++  GL +   +E A+KL  E     + ADT TY   +D  CK
Sbjct: 922  LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981

Query: 476  SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            SG + +A E+ + +     +  IV++N L++G 
Sbjct: 982  SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 7/317 (2%)

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKP 251
           + EA  +F K   +     V + N  +  L +  + T  A+ +F E      E GV    
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP----EVGVCW-- 687

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N  +YN +I  +C+ G + +A  L L M+ +   PDV++Y++V+ G+C   + ++  +L 
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M  +G++P+   +  I+  LC+  K+ +A      MI +G+ P+T  Y TLIDG+C  
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             I  A K F  M S     DV++Y  +I+ +C+  D+ EA  L+ EM  KG++P  VT+
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  G  +   ++ A ++ + M +   + +  TY   IDGLCK G +  A EL   +  
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927

Query: 492 SKYELNIVSYNCLIDGL 508
              + NI +YN +++GL
Sbjct: 928 IGLQPNIFTYNSIVNGL 944



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 8/237 (3%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + ++N +   L K+ + +  + L     +AGL  D  T++ L++ +CK G +     +
Sbjct: 932  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L  +L     P  VTF  L+ G C    + +   L          P+  T+N+L+   C 
Sbjct: 992  LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051

Query: 225  TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
              +   A  ++++M + G G       P+  TY  ++ G CK   + +A  LF +MK + 
Sbjct: 1052 RNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104

Query: 284  INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
             +  V TY+ +I+GF     + EA+ +F +M  +G+  D   F    D   K  + D
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 1161


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 228/435 (52%), Gaps = 14/435 (3%)

Query: 72  ERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLF 130
           + C ++G  D+       AL +   M R   +PPP + S+N++   L ++      L +F
Sbjct: 165 QACVAAGDLDV-------ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVF 217

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
             +   G+ P+  T++ +I+   K G +  GF +  ++L     PN VT+  L+ GLC  
Sbjct: 218 DEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRT 277

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            R+ E  AL  +    +  PD FTY+ L +GL RTG +   L+LF E        G    
Sbjct: 278 GRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG---- 333

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
               T + +++GLCK+G V KAK++F  +    + P  V Y ++I G+C   D   A  +
Sbjct: 334 --AYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F +M  + ++PD +T++ +++ LCK   + KA  L+  M   GV+P+  T+NTLID Y  
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +++    +   M+  G   DV+S+ +++  +CKN  + EA+++  +M+ K + P    
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YN++     E    E+AL L ++M+ + V+A   TYN  + GLC+S  + EA EL   +R
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 491 DSKYELNIVSYNCLI 505
           +     ++VSYN +I
Sbjct: 572 NQGLRPDVVSYNTII 586



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 208/414 (50%), Gaps = 9/414 (2%)

Query: 95  DYMLRMHPSPPP-VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           D ML  H  P P V ++N+L   L +    D   +L   + S  + PD +T+SIL +   
Sbjct: 253 DQML--HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G       +    L+      A T + L+ GLC + ++ +A  +F         P   
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            YNTLING C+      A  +FE+M + +       +P+ +TYN +I+GLCK   V KA+
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKLEMVTKAE 424

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L ++M+   ++P V T+ ++I  +  A    +   +  +M  +G++ DV++F  ++   
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CKNGK+ +A  +L+ MI++ V PN   YN++ID Y  +   + A  L   M+++G    +
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+YN L+   C++  ++EA  L   + ++G++P VV+YNT+          ++AL+L  E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           M +  +     T +  +  L  +G V +   L++ +     E +   Y  ++D 
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 200/405 (49%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +SS N+L   L     +  V + F  L +AG  PD +  + ++      G +     +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 165 LGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           L R+ RS     P+A ++  +I GL    +  +A  +F +       P+  TYNT+I+G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            + G       L ++M +         KPN VTYN ++ GLC+ G +D+ + L  +M   
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGP------KPNVVTYNVLLSGLCRTGRMDETRALMDEMASH 293

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           ++ PD  TY+ +  G     +      LF E + +GV     T S++++ LCK+GK+ KA
Sbjct: 294 SMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 353

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            ++ E+++  G+ P T  YNTLI+GYC    +  A  +F  M+S     D ++YN LIN 
Sbjct: 354 KQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK + V +A  L  EM   G+ P+V T+NTL        Q+E+   +  +M++  + +D
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++ + +   CK+G + EA+ +   +       N   YN +ID 
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 185/425 (43%), Gaps = 43/425 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E   + D M   H   P   +++ILF  L +     T+LSLF      G+    YT SI
Sbjct: 281 DETRALMDEMAS-HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSI 339

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  CK G+V+    V   ++ +   P  V + +LI G C    +  A  +F + +   
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  TYN LINGLC+      A +L  EM       GV   P+  T+NT+ID     G
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS----GV--DPSVETFNTLIDAYGTAG 453

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCY--------------------------- 300
            ++K   +   M+ + I  DV+++ SV++ FC                            
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 301 --------ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                   + D  +A  L  +M + GV   +VT+++++  LC++ ++D+A  L+  +  +
Sbjct: 514 SIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  +YNT+I   C     D A +L   M   G    + + +TL++       V + 
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDM 633

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA-ADTYTYNNFID 471
             LY +ML K ++P+   Y  +           +   L  EM    +A  DT   N+ +D
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRSNHELD 693

Query: 472 GLCKS 476
            +  S
Sbjct: 694 RIIAS 698


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/401 (33%), Positives = 208/401 (51%), Gaps = 13/401 (3%)

Query: 91  LCIFDYMLRMHPS----PPPVSSFNILFGCLAKNKHYDTVLSLFKRL---NSAGLFPDIY 143
           L +FD +LR           + S N     +A++     V S F R+   +   + P ++
Sbjct: 41  LHVFDELLRQGRGGGGGASIIRSLNRALAAVARDSPAAAV-SGFNRMARSSDGAVTPTLH 99

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+ ILI C C+ GR+  GF  LG +++  +    + FT L+K LCAE R   A  +  + 
Sbjct: 100 TYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRR 159

Query: 204 RV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                C P VF+YN L+ GLC    +  AL L   MA+  G+    C P+ V+Y+TIIDG
Sbjct: 160 MTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGD----CPPDVVSYSTIIDG 215

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L KEG  DKA   + +M +  I PDVVTY +++   C A   ++A  +   M+  GV PD
Sbjct: 216 LFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPD 275

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            +T++ I+   C +G+  +A  +LE M   GV P+  TY +L+D  C   +   ARK+  
Sbjct: 276 CITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILD 335

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           SM   G   +V++Y+TL++ Y     + E   L   M+  GI+P    ++ L     +  
Sbjct: 336 SMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQ 395

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            V+ A+ +F +MR+  +  D  TY   IDGLCKSG V +A+
Sbjct: 396 NVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V S++ +   L K    D   S +  +   G+ PD+ T++ ++   CK   +     
Sbjct: 203 PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMD 262

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL R++++   P+ +T+ S++ G C+  +  EA  +  K      EPD  TY +L++ LC
Sbjct: 263 VLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G  I A  + + M           KPN +TY+T++ G   +G + + ++L   M    
Sbjct: 323 KNGRCIEARKILDSMIKRG------LKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNG 376

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD   ++ +I       + + A  +F +M  Q + PDVVT+  ++D LCK+G++D A 
Sbjct: 377 IQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436

Query: 344 RLLE 347
             LE
Sbjct: 437 LNLE 440


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/425 (32%), Positives = 224/425 (52%), Gaps = 42/425 (9%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N I  ++A+  F  M+ M+P P  V       G +AK K Y TV+SL  +++  G+  + 
Sbjct: 63  NDIGIDDAMASFYRMIHMNPRPSFVE-LGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHND 121

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           YT +ILIN                                    LC  S I  A ++ +K
Sbjct: 122 YTLNILIN-----------------------------------SLCRLSHIHFAVSVLSK 146

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 +PD  T+ TLINGLC  G    A+ LF EMA      G    PNTVT+  ++D 
Sbjct: 147 MFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA------GRDAMPNTVTFTILVDV 200

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+G V +A+ +F  M ++ + P++ TY +++ G+C   + N+A ++F  M+ +G  P 
Sbjct: 201 LCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPS 260

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V ++S++++  CK+ ++D+A  LL  M  + + PNT TYNTL+ G C    +  A++LF 
Sbjct: 261 VHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFK 320

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M S+G + ++ +Y+ L++  CK+  +EEAL L + M  + ++P +V YN L  G+F   
Sbjct: 321 KMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAG 380

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++E A +LF ++  N +     TYN  I GL K G   EA +LFR + D  +  +  SYN
Sbjct: 381 KLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYN 440

Query: 503 CLIDG 507
            +I G
Sbjct: 441 VIIQG 445



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/264 (40%), Positives = 155/264 (58%), Gaps = 2/264 (0%)

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
           FGV    N  T N +I+ LC+   +  A  +  KM    I PD VT+T++I G C     
Sbjct: 115 FGVA--HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRI 172

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            EA  LF EM  +   P+ VTF++++D LCK G + +A  + E M  +GV PN YTYN L
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           ++GYCL  +++ A K+F  M   GC   V SY+ LIN YCK++ ++EA +L ++M  K +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P  VTYNTL  GL     +  A +LF +M  + +  +  TY+  +DGLCK G + EAL+
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L  ++++ K E +IV YN LI G+
Sbjct: 353 LLTSMQERKLEPDIVLYNILIQGM 376



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 35/275 (12%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A   F +M   N  P  V     +        ++    L  +M   GV  +  T ++
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LC+   +  A  +L  M   G+ P++ T+ TLI+G C   +I  A +LF  M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG----------- 437
            M + V++  L++  CK   V EA  ++  M  KG++P + TYN L  G           
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 438 -LFEI-----------------------HQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +FEI                        +++ A  L  +M    +  +T TYN  + GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C +  +LEA ELF+ +  S    N+ +Y+ L+DGL
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL 341


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 209/379 (55%), Gaps = 9/379 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S N L   L K   +  V  ++K +    + P++ T + +IN  CK+G+++    V+ 
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRI---MEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            +    F PN VT+ +LI G C   R+    +A A+  +       P+  T+N LI+G C
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +  +   AL +FEEM +         KP  VTYN++++GLC EG +++AK L  +M   N
Sbjct: 315 KDENLSAALKVFEEMQSQG------LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+V+TY ++I G+C      EA+ LF  +  QG+ P+V+TF+ ++   CK GKM++A 
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L ++M+ +G  PN  TYN LI G+C   K++  + L   M+  G   D V+YN LI+ +
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+ K+ ++A  L  EML KG+KP+ +TYN L  G      +  AL L  +M +    A+ 
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548

Query: 464 YTYNNFIDGLCKSGFVLEA 482
            TYN  I G C+ G + +A
Sbjct: 549 VTYNVLIQGYCRKGKLEDA 567



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 206/396 (52%), Gaps = 11/396 (2%)

Query: 117 LAKNKHYDTVLSL--FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           LA  ++  TVL L  FKR         + + + L++   K         V   ++R   +
Sbjct: 168 LAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKIS 227

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC---RTGHTIVA 231
           PN +TF ++I GLC   ++ +A  +    +V+   P+V TYNTLI+G C   R G    A
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             + +EM            PN+VT+N +IDG CK+  +  A ++F +M+ + + P VVTY
Sbjct: 288 DAILKEMVENK------VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTY 341

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            S++ G C     NEAK L  EM+   ++P+V+T++ +++  CK   +++A  L + +  
Sbjct: 342 NSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGK 401

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +G+ PN  T+NTL+ GYC   K++ A  L   M   G + +  +YN LI  +C+   +EE
Sbjct: 402 QGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEE 461

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             +L +EM  +G+K   VTYN L     E  + ++A +L DEM    +     TYN  ++
Sbjct: 462 VKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G C  G +  AL L + +       N+V+YN LI G
Sbjct: 522 GYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQG 557



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 204/390 (52%), Gaps = 10/390 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++  M+R   SP  ++ FN +   L K    +    +   +   G +P++ T++ LI+ +
Sbjct: 217 VYKEMIRRKISPNLIT-FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275

Query: 153 CKMGRVSHGF---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           CKMGRV   +    +L  ++ +  +PN+VTF  LI G C +  +  A  +F + +    +
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V TYN+L+NGLC  G    A  L +EM + N       KPN +TYN +I+G CK+  +
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN------LKPNVITYNALINGYCKKKLL 389

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+ELF  +  + + P+V+T+ +++ G+C      EA  L   M+++G  P+  T++ +
Sbjct: 390 EEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C+ GKM++   LL  M  RGV  +T TYN LI  +C   +   A +L   M   G 
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
               ++YN L+N YC   ++  AL+L  +M  +G    VVTYN L  G     ++E A  
Sbjct: 510 KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           L +EM    +  +  TY    + + + GF+
Sbjct: 570 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK-- 449
           +++++NT+IN  CK   + +A  +  +M   G  P VVTYNTL  G  ++ +V +  K  
Sbjct: 229 NLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKAD 288

Query: 450 -LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  EM  N V+ ++ T+N  IDG CK   +  AL++F  ++    +  +V+YN L++GL
Sbjct: 289 AILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 1/119 (0%)

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C + +++ + L+  Y +N      L  +        K +V++ N L   L + ++     
Sbjct: 157 CANSIIA-DMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVE 215

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++ EM R  ++ +  T+N  I+GLCK G + +A ++   ++   +  N+V+YN LIDG
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG 274


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 226/417 (54%), Gaps = 29/417 (6%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           ++M    P + ++N +   L K+   D    + + + + G+ PD   ++ LI+ FCK+G 
Sbjct: 36  MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   + +   + +    P+ + +T++I GLC   ++MEA  +F K      EPD  TY T
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 218 LINGLCRTGHTIVALNLFEEM---------------ANGNGEFGVV-------------- 248
           LI+G C++G    A +L  +M               A+G  + G V              
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            + N  TYN++++GLCK G + +A +L  +M+   + PD +T+T+++  +C   +  +A 
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM+D+G+QP V+TF+V+M+  C +G ++   RLL  M+ +G+ PNT TYN+L+  Y
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C+ + +    +++  M + G M D  +YN LI  +CK ++++EA  L+ EM  KG   T 
Sbjct: 336 CIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            +YN++  G F+  ++  A +LF+EMRR  +AAD   YN F+D     G +  ALEL
Sbjct: 396 SSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 205/405 (50%), Gaps = 6/405 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           ++     P V S++ +            VL L + +   GL P++YT++ +I   CK G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     VL  ++     P+ V +T+LI G C    I  A  LF +       PD   Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           +I GLCR G  + A  +F +M      F    +P+ VTY T+IDG CK G ++KA  L  
Sbjct: 121 VICGLCRCGKMMEADKVFNKM------FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M    + P+VVTYT++  G C     + A  L  EM  +G+Q ++ T++ +++ LCK+G
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
            + +A +L+E M   G+ P+T T+ TL+D YC T ++  A +L   M   G    V+++N
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            L+N +C +  +E+   L + ML KGI P   TYN+L       + +    +++  M   
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            V  D+ TYN  I G CK+  + EA  L + + +  + L   SYN
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYN 399



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 169/298 (56%), Gaps = 6/298 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV +Y+T+ING C  G     L L +EM           KPN  TYN+II  LCK G V
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG------LKPNLYTYNSIILLLCKSGKV 61

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A+ +  +M ++ I PD V YT++I GFC   +   A +LF EM  Q + PD + ++ +
Sbjct: 62  DDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV 121

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LC+ GKM +A ++   M  RGV P+  TY TLIDGYC + +++ A  L   M  +G 
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +VV+Y  L +  CK   V+ A  L  EM  KG++  + TYN+L  GL +   + +A+K
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L +EM    +  DT T+   +D  CK+G +++A EL R + D   +  ++++N L++G
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 182/332 (54%), Gaps = 6/332 (1%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            P+ V+++++I G C    + +   L  + ++   +P+++TYN++I  LC++G    A  
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           +  EM N     G+V  P+TV Y T+IDG CK G +  A +LF +M+ + I PD + YT+
Sbjct: 67  VLREMINQ----GIV--PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           VI G C      EA ++F +M  +GV+PD VT++ ++D  CK+G+M+KA  L   M+  G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           + PN  TY  L DG C   ++D A +L   M   G   ++ +YN+L+N  CK+ ++ +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L  EM   G+ P  +T+ TL     +  ++ +A +L  EM    +     T+N  ++G 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           C SG + +   L   + +     N  +YN L+
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 136/230 (59%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           MK     PDVV+Y++VI G+C   +  +  +L  EM  +G++P++ T++ I+  LCK+GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D A R+L  MI +G+ P+T  Y TLIDG+C    I  A KLF  ME    + D ++Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I   C+   + EA  ++++M S+G++P  VTY TL  G  +  ++E+A  L ++M ++ 
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +  TY    DGLCK G V  A EL   +     +LNI +YN L++GL
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGL 230



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 7/333 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M      P  V+ +  L     K+   +   SL  ++  +GL P++ T++ L
Sbjct: 133 EADKVFNKMFSRGVEPDEVT-YTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            +  CK+G+V     +L  +       N  T+ SL+ GLC    I +A  L  +  V   
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+ TL++  C+TG  + A  L  EM +         +P  +T+N +++G C  G 
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG------LQPTVITFNVLMNGFCMSGM 305

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++  + L   M ++ I P+  TY S+++ +C  N+      ++  M  +GV PD  T+++
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK   M +A  L + M  +G N    +YN++I G+    KI  AR+LF  M   G
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
              D   YN  ++      ++E AL L  E + 
Sbjct: 426 MAADAEIYNLFVDISYGEGNMETALELCDEAIE 458


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 220/417 (52%), Gaps = 14/417 (3%)

Query: 94  FDYMLRMHPSPPPVSSFNIL--FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
            +YM      P  V+   ++  F  + + K+   ++ +   L  +G   D  ++++LIN 
Sbjct: 92  LEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGI---LEESGAVIDANSYNVLINA 148

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +CK G +     VL     +   PNA T+ +++  LC   ++ +A  +  +     C PD
Sbjct: 149 YCKSGEIEEALRVLDH---TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPD 205

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V T   LI+  C+      A+ LF EM  G G     CKP+ VTYN +I G CKEG +D+
Sbjct: 206 VVTCTVLIDATCKESGVGQAMKLFNEM-RGKG-----CKPDVVTYNVLIKGFCKEGRLDE 259

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A     K+       DV+++  ++R  C    W +A +L   M+ +G  P VVTF+++++
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LC+ G + KA  +LE+M   G  PN+ ++N LI G+C    ID A +    M S GC  
Sbjct: 320 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+V+YN L+   CK+  V++A+ + S++ SKG  P++++YNT+  GL ++ + E A++L 
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +EM    +  D  T  + + GL + G V EA++ F  ++    + N   YN ++ GL
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGL 496



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 196/427 (45%), Gaps = 18/427 (4%)

Query: 59  TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLA 118
            V D  S    +   CKS   G+I      EAL + D+        P  ++++ +   L 
Sbjct: 135 AVIDANSYNVLINAYCKS---GEIE-----EALRVLDHT----SVAPNAATYDAVLCSLC 182

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
                   + +  R   +  +PD+ T ++LI+  CK   V     +   +      P+ V
Sbjct: 183 DRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVV 242

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+  LIKG C E R+ EA     K   + C+ DV ++N ++  LC  G  + A+ L   M
Sbjct: 243 TYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM 302

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                     C P+ VT+N +I+ LC++G + KA  +   M      P+  ++  +I+GF
Sbjct: 303 LRKG------CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGF 356

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C     + A      M+ +G  PD+VT+++++  LCK+GK+D A  +L  +  +G +P+ 
Sbjct: 357 CNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSL 416

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            +YNT+IDG     K + A +L   M   G   D+++  +++    +   V EA+  +  
Sbjct: 417 ISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHY 476

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +   GIKP    YN++ +GL +  Q   A+    +M  N       +Y   I G+   G 
Sbjct: 477 LKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGL 536

Query: 479 VLEALEL 485
             EA +L
Sbjct: 537 AEEASKL 543



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 175/366 (47%), Gaps = 7/366 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ + D  L+     P V +  +L     K       + LF  +   G  PD+ T+++L
Sbjct: 189 QAMQVLDRQLQ-SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVL 247

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FCK GR+    + L ++       + ++   +++ LC+  R M+A  L        C
Sbjct: 248 IKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGC 307

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V T+N LIN LC+ G    ALN+ E M   +G       PN+ ++N +I G C    
Sbjct: 308 FPSVVTFNILINFLCQKGLLGKALNVLEMMPK-HGH-----TPNSRSFNPLIQGFCNRKG 361

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A E    M      PD+VTY  ++   C     ++A  +  ++  +G  P +++++ 
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 421

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D L K GK + A  LLE M ++G+ P+  T  +++ G     K+  A K F  ++  G
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG 481

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +   YN+++   CK +    A+    +M++ G KPT  +Y TL  G+      E A 
Sbjct: 482 IKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEAS 541

Query: 449 KLFDEM 454
           KL +E+
Sbjct: 542 KLSNEL 547



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 125/244 (51%), Gaps = 3/244 (1%)

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L + G +++       M ++   PDVV  T++IR FC       A R+   + + G   D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             +++V+++  CK+G++++A R+L+      V PN  TY+ ++   C   K+  A ++  
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
               + C  DVV+   LI+  CK   V +A+ L++EM  KG KP VVTYN L  G  +  
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +++ A+    ++      +D  ++N  +  LC  G  ++A++L   +       ++V++N
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 503 CLID 506
            LI+
Sbjct: 316 ILIN 319



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 6/235 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+  H   P   SFN L       K  D  +   + + S G +PDI T++IL+   CK G
Sbjct: 336 MMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDG 395

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +V    V+L ++     +P+ +++ ++I GL    +   A  L  +      +PD+ T  
Sbjct: 396 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 455

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +++ GL R G    A+  F  +      FG+  KPN   YN+I+ GLCK      A +  
Sbjct: 456 SVVGGLSREGKVHEAIKFFHYLKG----FGI--KPNAFIYNSIMMGLCKAQQTSLAIDFL 509

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           + M      P   +YT++I+G  Y     EA +L  E+  +G+    +   V  D
Sbjct: 510 VDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQD 564



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 3/175 (1%)

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L +NG++++ SR LE M  +G  P+      LI  +C   +  +A ++   +E +G + D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             SYN LIN YCK+ ++EEAL +        + P   TY+ +   L +  ++++A+++ D
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              ++    D  T    ID  CK   V +A++LF  +R    + ++V+YN LI G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKG 250


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 219/424 (51%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
           +A  +FD +LR       +   N     +A++     V S + R+  AG   + P++ T+
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAV-SRYNRMARAGADEVTPNLCTY 94

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            ILI   C  GR+  GF  LG +++  F  +A+ FT L+KGLCA+ R  +A  +  +   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+VF+YN L+ GLC    +  AL L + M +  G+    C P+ V+Y T+I+G  
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFF 210

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +DKA   + +M D  I P+VVTY+S+I   C A   ++A  +   M+  GV P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ I+   C +G+  +A   L+ M   GV P+  TYN+L+D  C   +   ARK+F SM
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   ++ +Y TL+  Y     + E   L   M+  GI P    ++ L     +  +V
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A+ +F +MR+  +  DT TY   I  LCKSG V +A+  F  + D +     + YN L
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450

Query: 505 IDGL 508
           I  L
Sbjct: 451 IHSL 454



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 138/291 (47%), Gaps = 11/291 (3%)

Query: 97  MLRMHPS-----PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +L+M P      PP V S+  +     K    D     +  +   G+ P++ T+S +I  
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            CK   +     VL  ++++   PN  T+ S++ G C+  +  EA     K      EPD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V TYN+L++ LC+ G    A  +F+ M           KP   TY T++ G   +G + +
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEITTYGTLLQGYATKGALVE 357

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
              L   M    I+P+   ++ +I  +      ++A  +F +M  QG+ PD VT+  ++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            LCK+G+++ A R  E MI   ++P    YN+LI   C+ DK D A+  F+
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFL 468



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 31/239 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ P+  T++ +++ +C  G+       
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+ VT+ SL+  LC   R  EA  +F        +P++ TY TL+ G   
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 225 TGHTIVALNLFEEMANGNG------EFGV-VCK-----------------------PNTV 254
            G  +    L + M   NG       F + +C                        P+TV
Sbjct: 352 KGALVEMHGLLDLMVR-NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           TY T+I  LCK G V+ A   F +M DE ++P  + Y S+I   C  + W++AK  F++
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 93  IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           + D M+R  +HP+      F+IL    AK    D  + +F ++   GL PD  T+  +I 
Sbjct: 361 LLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GRV        +++    +P  + + SLI  LC   +  +A   F K  +   E 
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLKCWI---EA 474

Query: 211 DVFTYNTLIN 220
            V+T  +LI 
Sbjct: 475 FVWTLFSLIQ 484


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 214/404 (52%), Gaps = 10/404 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N +   LA+N+    V  LF  L      P+++T +I+I+  CK G +     
Sbjct: 166 PPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARA 221

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  R+     +P+ VT+ SLI G      + E   L ++ R   C  DV TYN LIN   
Sbjct: 222 LFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFS 281

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A + F EM       GVV   N VT++T +D  CKEG V +A +LF +M+   
Sbjct: 282 KFGRMEKAYSYFGEMKRQ----GVV--ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+  TYTS++ G C A   ++A  L  EM+ QG+ P+VVT++V++D LCK GK+ +A 
Sbjct: 336 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEAD 395

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L LM   GV  N   Y TLI G+ + +  + A  L   M++ G   DV  Y TLI   
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK++ V+EA SL  +M   G++P  V Y T+   LF+  +   A+ L  ++  +    + 
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            TY   IDGLCK+G + EA+  F  +R+   + N+ +Y  LIDG
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDG 559



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 211/419 (50%), Gaps = 7/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M  M  SP  V ++N L     K    + V  L   +  +G   D+ T++ L
Sbjct: 218 EARALFVRMKAMGCSPD-VVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNAL 276

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCF K GR+   +   G + R     N VTF++ +   C E  + EA  LF + RV   
Sbjct: 277 INCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGM 336

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+ FTY +L++G C+ G    A+ L +EM +     G+V  PN VTY  ++DGLCKEG 
Sbjct: 337 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVVTYTVMVDGLCKEGK 390

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A  +   M+   +  + + YT++I G    N+   A  L  +M ++G++ DV  +  
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK+ K+D+A  LL  M   G+ PNT  Y T++D      K   A  L   +  +G
Sbjct: 451 LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +VV+Y  LI+  CK   + EA+S +++M   G+ P V  Y  L  G  +I  + +A+
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            L +EM    ++ D   Y + IDG  K   + +A  L   + +S  +L++  Y C I G
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISG 629



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 215/428 (50%), Gaps = 17/428 (3%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSS-----FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           P+ A  + D + R   +  P  S      + L   LA +   D  +    R+    + P+
Sbjct: 109 PHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPN 168

Query: 142 IYT-HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
             T + IL+    ++ R   G +V  R+      PN  TF  +I  LC E  ++EA ALF
Sbjct: 169 TRTCNHILL----RLARNRQGGLVR-RLFDLLPVPNVFTFNIVIDFLCKEGELVEARALF 223

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + +   C PDV TYN+LI+G  + G       L  EM          C  + VTYN +I
Sbjct: 224 VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG------CAADVVTYNALI 277

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +   K G ++KA   F +MK + +  +VVT+++ +  FC      EA +LF +M  +G+ 
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+  T++ ++D  CK G++D A  LL+ M+ +G+ PN  TY  ++DG C   K+  A  +
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              ME  G   + + Y TLI+ +  N + E AL L ++M +KG++  V  Y TL  GL +
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             +V+ A  L  +M    +  +T  Y   +D L K+G   EA+ L   I DS ++ N+V+
Sbjct: 458 DQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVT 517

Query: 501 YNCLIDGL 508
           Y  LIDGL
Sbjct: 518 YCALIDGL 525



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 185/379 (48%), Gaps = 6/379 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F+       K       + LF ++   G+ P+ +T++ L++  CK GR+    V+L 
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     PN VT+T ++ GLC E ++ EA  + +       + +   Y TLI+G     
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           ++  AL+L  +M N   E  V        Y T+I GLCK+  VD+AK L  KM    + P
Sbjct: 425 NSERALDLLNQMKNKGMELDVS------LYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP 478

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + V YT+++     A   +EA  L  +++D G QP+VVT+  ++D LCK G + +A    
Sbjct: 479 NTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHF 538

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G++PN   Y  LIDG+C    ++ A  L   M   G   D V Y +LI+ Y K 
Sbjct: 539 NKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQ 598

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++++A +L ++M+  G++  +  Y     G   ++ ++ A  +  EM    +  D   Y
Sbjct: 599 ANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVY 658

Query: 467 NNFIDGLCKSGFVLEALEL 485
           N  I    K G + EA  L
Sbjct: 659 NCLIRKYQKLGNMEEASSL 677


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  +   G+ PD   ++ LI+ FCK G +         +     TP+ +T+T++I G C 
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
              ++EA  LF +      EPD  T+  LING C+ GH   A  +   M          C
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------C 452

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN VTY T+IDGLCKEG +D A EL  +M    + P++ TY S++ G C + +  EA +
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  E    G+  D VT++ +MD  CK+G+MDKA  +L+ M+ +G+ P   T+N L++G+C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           L   ++   KL   M + G   +  ++N+L+  YC   +++ A ++Y +M S+G+ P   
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY  L  G  +   ++ A  LF EM+    +    TY+  I G  K    LEA E+F  +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692

Query: 490 R 490
           R
Sbjct: 693 R 693



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 206/383 (53%), Gaps = 7/383 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   F  M+R    P  V  +  L     K          F  ++S  + PD+ T++ +
Sbjct: 334 EAEEAFSEMIRQGILPDTVV-YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FC++G +     +   +      P++VTFT LI G C    + +A  +        C
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V TY TLI+GLC+ G    A  L  EM      + +  +PN  TYN+I++GLCK G 
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKSGN 506

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A +L  + +   +N D VTYT+++  +C + + ++A+ +  EM+ +G+QP +VTF+V
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M+  C +G ++   +LL  M+ +G+ PN  T+N+L+  YC+ + +  A  ++  M S G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D  +Y  L+  +CK ++++EA  L+ EM  KG   +V TY+ L  G  +  +   A 
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686

Query: 449 KLFDEMRRNHVAADTYTYNNFID 471
           ++FD+MRR  +AAD   ++ F D
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSD 709



 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 214/412 (51%), Gaps = 6/412 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++ +    P V S++ +     +    D V  L + +   GL P+ Y +  +I   C++ 
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +++        ++R    P+ V +T+LI G C    I  A+  F +       PDV TY 
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            +I+G C+ G  + A  LF EM      F    +P++VT+  +I+G CK G +  A  + 
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M     +P+VVTYT++I G C   D + A  L  EM   G+QP++ T++ I++ LCK+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +++A +L+      G+N +T TY TL+D YC + ++D A+++   M   G    +V++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N L+N +C +  +E+   L + ML+KGI P   T+N+L       + ++ A  ++ +M  
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             V  D  TY N + G CK+  + EA  LF+ ++   + +++ +Y+ LI G 
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 176/333 (52%), Gaps = 6/333 (1%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  ++  +I  +C   RI EA  L     +    PDV +Y+T++NG CR G       L 
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           E M           KPN+  Y +II  LC+   + +A+E F +M  + I PD V YT++I
Sbjct: 305 EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GFC   D   A + F EM  + + PDV+T++ I+   C+ G M +A +L   M  +G+ 
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P++ T+  LI+GYC    +  A ++   M   GC  +VV+Y TLI+  CK  D++ A  L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM   G++P + TYN++  GL +   +E A+KL  E     + ADT TY   +D  CK
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           SG + +A E+ + +     +  IV++N L++G 
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 7/317 (2%)

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKP 251
           + EA  +F K   +     V + N  +  L +  + T  A+ +F E      E GV    
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP----EVGVCW-- 244

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N  +YN +I  +C+ G + +A  L L M+ +   PDV++Y++V+ G+C   + ++  +L 
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M  +G++P+   +  I+  LC+  K+ +A      MI +G+ P+T  Y TLIDG+C  
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             I  A K F  M S     DV++Y  +I+ +C+  D+ EA  L+ EM  KG++P  VT+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  G  +   ++ A ++ + M +   + +  TY   IDGLCK G +  A EL   +  
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 492 SKYELNIVSYNCLIDGL 508
              + NI +YN +++GL
Sbjct: 485 IGLQPNIFTYNSIVNGL 501



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 8/237 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L K+ + +  + L     +AGL  D  T++ L++ +CK G +     +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P  VTF  L+ G C    + +   L          P+  T+N+L+   C 
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             +   A  ++++M + G G       P+  TY  ++ G CK   + +A  LF +MK + 
Sbjct: 609 RNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +  V TY+ +I+GF     + EA+ +F +M  +G+  D   F    D   K  + D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 208/386 (53%), Gaps = 8/386 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +S+FN L   L K         L  ++   G+ P+++T++  I   C+ G +     ++G
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R++     P+ VT+  LI GLC  S+  EA     K      EPD FTYNTLI G C+ G
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335

Query: 227 HTIVALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
              +A  +       N  F G V  P+  TY ++IDGLC EG  ++A  LF +   + I 
Sbjct: 336 MVQLAERILV-----NAVFNGFV--PDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+V+ Y ++I+G        EA +L  EM ++G+ P+V TF+++++ LCK G +  A  L
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           +++MI +G  P+ +T+N LI GY    K+++A ++   M  NG   DV +YN+L+N  CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
               E+ +  Y  M+ KG  P + T+N L   L   H++++AL L +EM+   V  D  T
Sbjct: 509 TSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVT 568

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRD 491
           +   IDG CK+G +  A  LFR + +
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 207/405 (51%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N     L +    D  + +  RL   G  PD+ T++ LI   CK  +     V 
Sbjct: 249 PNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG+++     P++ T+ +LI G C    +  A  +          PD FTY +LI+GLC 
Sbjct: 309 LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCH 368

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  AL LF E A G G      KPN + YNT+I GL  +G + +A +L  +M ++ +
Sbjct: 369 EGETNRALALFNE-ALGKG-----IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V T+  ++ G C     ++A  L   M+ +G  PD+ TF++++       KM+ A  
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L++M+  GV+P+ YTYN+L++G C T K +   + + +M   GC  ++ ++N L+   C
Sbjct: 483 ILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH-VAADT 463
           +   +++AL L  EM +K + P  VT+ TL  G  +   ++ A  LF +M   + V+  T
Sbjct: 543 RYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  I    +   V  A +LF+ + D     +  +Y  ++DG 
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 213/456 (46%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F+ M   +   P V S+N +   L  + ++D    ++ R+   G+ PD+Y+ +I
Sbjct: 93  QEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 148 LINCFCKMGR-----------------------------------VSHGFVVLGRILRSC 172
            +  FC+  R                                      G+ + G++L S 
Sbjct: 152 RMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASG 211

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +    TF  L+  LC +  + E   L  K       P++FTYN  I GLC+ G    A+
Sbjct: 212 VSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAV 271

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +   + +         KP+ VTYN +I GLCK     +A+    K+ +E + PD  TY 
Sbjct: 272 RMVGRLIDQGP------KPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G+C       A+R+ +  +  G  PD  T+  ++D LC  G+ ++A  L    + +
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN   YNTLI G      I  A +L   M   G + +V ++N L+N  CK   V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L   M+SKG  P + T+N L  G     ++E AL++ D M  N V  D YTYN+ ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+    + +E ++ + +     N+ ++N L++ L
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESL 541



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 211/459 (45%), Gaps = 46/459 (10%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNIL---FGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           P +AL +F+ M +       +S++  +    G   K +  + VL   ++     +   +Y
Sbjct: 20  PMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVY 79

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
             ++    + + G+V     V  R+      P   ++ +++  L       +A  ++ + 
Sbjct: 80  VGAM--KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
           R     PDV+++   +   CRT     AL L   M++        C+ N V Y T++ G 
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQG------CEMNVVAYCTVVGGF 191

Query: 264 CKEGFVDKAKELFLKMKDENIN-----------------------------------PDV 288
            +E F D+  ELF KM    ++                                   P++
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY   I+G C   + + A R+   ++DQG +PDVVT++ ++  LCKN K  +A   L  
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK 311

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G+ P+++TYNTLI GYC    +  A ++ V+   NG + D  +Y +LI+  C   +
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
              AL+L++E L KGIKP V+ YNTL  GL     +  A +L  EM    +  +  T+N 
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++GLCK G V +A  L + +    Y  +I ++N LI G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 191/407 (46%), Gaps = 29/407 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N AL +F+  L      P V  +N L   L+          L   ++  GL P++ T +I
Sbjct: 373 NRALALFNEALG-KGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  CKMG VS    ++  ++   + P+  TF  LI G   + ++  A  +        
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDV+TYN+L+NGLC+T      +  ++ M          C PN  T+N +++ LC+  
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYH 545

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTF 326
            +DKA  L  +MK++++NPD VT+ ++I GFC   D + A  LF +M +   V     T+
Sbjct: 546 KLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTY 605

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++I+    +   +  A +L + M+ R + P+ YTY  ++DG+C T  +D   K  + M  
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMME 665

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NG +  + +   +IN  C    V EA  +   M+ KG+ P  V  NT+F           
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIF----------- 712

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
                 +  +  VAA      + +   C + +  E   LF  +RD +
Sbjct: 713 ------DHDKKEVAAPKLVLEDLLKKSCITYYAYEL--LFDGLRDKR 751



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 140/280 (50%), Gaps = 8/280 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
           AL +F  M   +G      K    TY +II+ L   G  +  +E+ + M+ +N+   ++ 
Sbjct: 23  ALEMFNSMRKEDG-----FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR-QNVGNHMLE 76

Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y   ++ +       EA  +F  M     +P V +++ IM  L  +G  D+A ++   
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RG+ P+ Y++   +  +C T +   A +L  +M S GC  +VV+Y T++  + +   
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            +E   L+ +ML+ G+   + T+N L   L +   V+   KL D++ +  V  + +TYN 
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FI GLC+ G +  A+ +   + D   + ++V+YN LI GL
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGL 296


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 221/418 (52%), Gaps = 10/418 (2%)

Query: 95  DYMLRMHPSPPPVSSFN--ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           D ++ M  S    +SF   IL   L K    +  + L   +   GL  D+  +S LI+ F
Sbjct: 31  DLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGF 90

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G +  G  +   +L    +PN V ++ LI G C +    EA A+         +PDV
Sbjct: 91  CSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDV 150

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +TY  +I GLC+ G    AL+LF+ M    GE     +P+TVTYN +I+GLCKEG +  A
Sbjct: 151 YTYTCMIGGLCKDGRARKALDLFDLMTE-KGE-----EPSTVTYNVLINGLCKEGCIGDA 204

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIM 330
            ++F  M ++    +VV+Y ++I G C     +EA +LF  +++ G  V+PDV+TF+ ++
Sbjct: 205 FKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVI 264

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             LCK G++DKA  + + MI RG   N +T + LI  Y  +  ID A +L+  +   G +
Sbjct: 265 QGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLV 324

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
               +Y+ +I+ +CK   +  A  L+S M   G+ PT+  YNTL   L +   +E+A +L
Sbjct: 325 PSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRL 384

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F EM+ ++   DT ++N  IDG  K+G +  A EL   ++      +  +Y+  I+ L
Sbjct: 385 FQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL 442



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 208/415 (50%), Gaps = 46/415 (11%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            KR+N   + PDI +++ +IN  CK  R+     +L  +  S   PN+ T+  L+ GLC 
Sbjct: 1   MKRIN---ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK 57

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           E R+ EA  L  + +    E DV  Y+TLI+G C  G       LF+EM     E G+  
Sbjct: 58  EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEML----EKGI-- 111

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN V Y+ +I+G CK+G   +A  +   M +  I PDV TYT +I G C      +A  
Sbjct: 112 SPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALD 171

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF  M ++G +P  VT++V+++ LCK G +  A ++ E M+ +G      +YNTLI G C
Sbjct: 172 LFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC 231

Query: 370 LTDKIDHARKLFVSMESNG--CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK----- 422
              K+D A KLF S+  +G     DV+++NT+I   CK   +++A+ +Y  M+ +     
Sbjct: 232 NNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291

Query: 423 ------------------------------GIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
                                         G+ P+  TY+ +  G  ++H +  A  LF 
Sbjct: 292 LFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFS 351

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            M+ + ++   + YN  +  LCK   + +A  LF+ +++S  E + +S+N +IDG
Sbjct: 352 RMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 201/413 (48%), Gaps = 5/413 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML    SP  V  ++ L     K   +    ++   +   G+ PD+YT++ +I   
Sbjct: 102 LFDEMLEKGISPNVVV-YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGL 160

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR      +   +      P+ VT+  LI GLC E  I +A  +F          +V
Sbjct: 161 CKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEV 220

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            +YNTLI GLC  G    A+ LF  +     E G   +P+ +T+NT+I GLCKEG +DKA
Sbjct: 221 VSYNTLIMGLCNNGKLDEAMKLFSSLL----EDGNYVEPDVITFNTVIQGLCKEGRLDKA 276

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E++  M +     ++ T   +I  +  +   ++A  L+  +   G+ P   T+SV++D 
Sbjct: 277 VEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDG 336

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK   ++ A  L   M   G++P  + YNTL+   C    ++ AR+LF  M+ + C  D
Sbjct: 337 FCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD 396

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            +S+N +I+   K  D+  A  L ++M   G+ P   TY++    L ++ Q+E A   FD
Sbjct: 397 TISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFD 456

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            M  + +  D + Y++ I G   +  + E + L R + D    L++   N ++
Sbjct: 457 SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 183/384 (47%), Gaps = 8/384 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  + G L K+      L LF  +   G  P   T+++LIN  CK G +   F +
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKI 207

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
              +L        V++ +LI GLC   ++ EA  LF+         EPDV T+NT+I GL
Sbjct: 208 FETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    A+ +++ M    G FG     N  T + +I    K G +DKA EL+ ++   
Sbjct: 268 CKEGRLDKAVEIYDTMIE-RGSFG-----NLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P   TY+ +I GFC  +  N AK LF  M   G+ P +  ++ +M  LCK   +++A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            RL + M      P+T ++N +IDG      I  A++L   M+  G   D  +Y++ IN 
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
             K   +EEA   +  M++ GI P    Y++L  G     ++E  + L  +M    V  D
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILD 501

Query: 463 TYTYNNFIDGLCKSGFVLEALELF 486
               N+ +  LC S   L  +EL 
Sbjct: 502 LEITNSILTFLCNSAEHLHVMELL 525



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ V+YNTII+GLCKE  ++KA +L ++M+  +  P+  TY  ++ G C      EA RL
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             EM  +G++ DVV +S ++   C  G +D+   L + M+ +G++PN   Y+ LI+G+C 
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                 A  +  +M   G   DV +Y  +I   CK+    +AL L+  M  KG +P+ VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA-I 489
           YN L  GL +   +  A K+F+ M       +  +YN  I GLC +G + EA++LF + +
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 490 RDSKY-ELNIVSYNCLIDGL 508
            D  Y E +++++N +I GL
Sbjct: 248 EDGNYVEPDVITFNTVIQGL 267



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 127/230 (55%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           MK  NI PD+V+Y ++I G C      +A  L +EM     +P+  T+ ++MD LCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +++A RLL  M  +G+  +   Y+TLI G+C    +D  + LF  M   G   +VV Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LIN +CK     EA ++   M  +GI+P V TY  +  GL +  +  +AL LFD M    
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               T TYN  I+GLCK G + +A ++F  + +    L +VSYN LI GL
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 171/385 (44%), Gaps = 44/385 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M      P  V+ +N+L   L K         +F+ +   G   ++ +++ L
Sbjct: 168 KALDLFDLMTEKGEEPSTVT-YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTL 226

Query: 149 INCFCKMGRVSHGFVVLGRILRSC--FTPNAVTFTSLIKGLCAESRIMEAAA-------- 198
           I   C  G++     +   +L       P+ +TF ++I+GLC E R+ +A          
Sbjct: 227 IMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286

Query: 199 -----LFTKH--------------------RV--FACEPDVFTYNTLINGLCRTGHTIVA 231
                LFT H                    RV      P   TY+ +I+G C+      A
Sbjct: 287 GSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFA 346

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             LF  M            P    YNT++  LCKE  +++A+ LF +MK+ N  PD +++
Sbjct: 347 KGLFSRMKISG------LSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
             +I G   A D + AK L  +M   G+ PD  T+S  ++ L K G+M++A    + MI 
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA 460

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G+ P+ + Y++LI G+ L D+I+    L   M   G + D+   N+++ + C + +   
Sbjct: 461 SGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLH 520

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFL 436
            + L     S+    T ++ + L +
Sbjct: 521 VMELLPNFSSESSGGTSISCDKLLM 545


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/411 (32%), Positives = 213/411 (51%), Gaps = 6/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R   + P   S N L   L+K+ +   V   F  +  AG+ P ++T++++I+  CK G 
Sbjct: 186 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           + +   +  ++     +P+ VT+ SLI G      + E A+LF + +   C PD+ TYN 
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LIN  C+      A   F EM N NG      KPN VTY+T+ID  CKEG +  A +L  
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLLX 359

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+   + P+  TYTS+I   C A +  EA +L  +M+  GV+ ++VT++ ++D LCK G
Sbjct: 360 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 419

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +M +A  +   M+  G++PN   Y  L+ GY   ++++ A K+   M       D++ Y 
Sbjct: 420 RMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYG 479

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           ++I  +C  + +EE   +  EM S+GI    V   T+    F+  +   AL  F EM+  
Sbjct: 480 SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDV 539

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V A   TY   IDGLC++G V  A++ F  +     + N+  Y  LIDGL
Sbjct: 540 GVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 203/410 (49%), Gaps = 6/410 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P V ++N L     K    + V SLF  +   G  PDI T++ LINC+CK  +
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   F     +  +   PN VT+++LI   C E  +  A  L    R     P+ FTY +
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+  C+ G+   A  L  +M       GV  K N VTY  ++DGLCK G + +A+E+F 
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVTYTALLDGLCKAGRMIEAEEVFR 429

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M  + I+P+   YT+++ G+  A    +A ++  +M +  ++PD++ +  I+   C   
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 489

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+++   +LE M  RG++ N     T+ID Y    K   A   F  M+  G    +V+Y 
Sbjct: 490 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 549

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            LI+  C+   VE A+  +  MLS G++P V  Y +L  GL   + +E A KLFDEM+  
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  D   +   IDG  K G + EAL L   + +   E ++  Y  L+ G
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 659



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 147/261 (56%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +C   +  ++ +     + G +++A E F +M++    P   +   ++     + +    
Sbjct: 155 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 214

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           ++ F +M+  G+ P V T++V++D LCK G ++ + RL   M   G++P+  TYN+LIDG
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 274

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y     ++    LF  M+  GC+ D+++YN LIN YCK + +  A   +SEM + G+KP 
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY+TL     +   ++ A+KL  +MRR  +  + +TY + ID  CK+G + EA +L  
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +  +  +LNIV+Y  L+DGL
Sbjct: 395 DMLQAGVKLNIVTYTALLDGL 415



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%)

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           N C+     ++ L + + +   +EEA   +S M +    P   + N L   L +    + 
Sbjct: 154 NICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQL 213

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             K F++M    +A   +TYN  ID LCK G +  +  LF  +R+     ++V+YN LID
Sbjct: 214 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 273

Query: 507 G 507
           G
Sbjct: 274 G 274


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 218/413 (52%), Gaps = 21/413 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  FN L   L K+ + D  + LF+ + S+ + PDI+T++ +I+  CK G +     +
Sbjct: 95  PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKAREL 154

Query: 165 LGRILRSC--FTPNAVTFTSLI-KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           L  ++R      P+ VT+ +LI  G+C +  + EA  +    ++    PDV TYN++I+ 
Sbjct: 155 LEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHA 214

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC  G  + A  + + M+         C P+ VT+NT++DG CK G + +A E+  +M  
Sbjct: 215 LCVAGRVVEAAEILKTMS---------CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 265

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           ENI PDV+TYT ++ G C       A  L  E++ QG  PDV+ ++ ++D LCK+G++++
Sbjct: 266 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 325

Query: 342 ASRLLELMIWRGV---------NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           A +L++ M  R +          P  +TYN ++ G      I  A  L   + + G + D
Sbjct: 326 AHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 385

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+YNTLI+  CK   V EA  L  EM S G  P  VT  ++  GL  + +V+ A  L  
Sbjct: 386 VVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 445

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           EM R   A +   Y + IDGLCKS  + +A  +  A+R     L+  +Y  LI
Sbjct: 446 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLI 498



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 227/464 (48%), Gaps = 46/464 (9%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+  FD+          V S+N L   L K+ H      ++K L  +G  P++ T  
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI   CK G+ +     L  +      P+   F  LI GL  +    +A  LF      
Sbjct: 67  ILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESS 126

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID-GLCK 265
              PD+FTYNT+I+GLC++G+   A  L EEM    G+      P+ VTYNT+I+ G+CK
Sbjct: 127 RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGK----SAPDIVTYNTLINAGICK 182

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIR----------------------------- 296
           +G V++A E+   MK     PDV+TY S+I                              
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNT 242

Query: 297 ---GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
              GFC A     A  +  EM  + + PDV+T++++++ LC+ G++  A  LLE ++ +G
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 302

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS---------YNTLINWYC 404
             P+   Y +L+DG C + +I+ A KL   M +   + ++VS         YN ++    
Sbjct: 303 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLI 362

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  + +A+SL S+++++G  P VVTYNTL  GL + ++V  A  L DEM       +  
Sbjct: 363 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDV 422

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T  + + GLC+ G V +A  L   +   ++  N+V Y  LIDGL
Sbjct: 423 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 466



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 57/415 (13%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDIYT 144
           P++A+ +F+ M     +P  + ++N +   L K+ + +    L + +   G    PDI T
Sbjct: 113 PDQAVKLFENMESSRVNPD-IFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVT 171

Query: 145 HSILINC-FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           ++ LIN   CK G V     +L  +  +   P+ +T+ S+I  LC   R++EAA +    
Sbjct: 172 YNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL--- 228

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
           +  +C PD+ T+NTL++G C+ G    AL + EEM   N        P+ +TY  +++GL
Sbjct: 229 KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCREN------ILPDVITYTILVNGL 282

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM--------- 314
           C+ G V  A  L  ++  +   PDV+ YTS++ G C + +  EA +L  EM         
Sbjct: 283 CRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEM 342

Query: 315 -----------------------------------MDQGVQPDVVTFSVIMDELCKNGKM 339
                                              + +G  PDVVT++ ++D LCK  ++
Sbjct: 343 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 402

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A  L + M   G  PN  T  +++ G C   ++D A  L V M       +VV Y +L
Sbjct: 403 REACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 462

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           I+  CK+  +++A  +   M  +G+      Y  L + +    +V  A+ ++DEM
Sbjct: 463 IDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 184/386 (47%), Gaps = 23/386 (5%)

Query: 67  KKFLKERCKSSGQGDINLITPN--------------EALCIFDYMLRMHPSPPPVSSFNI 112
           ++ L+E  +  G+   +++T N              EAL I D M    P+P  ++  +I
Sbjct: 152 RELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSI 211

Query: 113 LFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           +   C+A       V+   + L +    PD+ T + L++ FCK G +     VL  + R 
Sbjct: 212 IHALCVAGR-----VVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              P+ +T+T L+ GLC   ++  A  L  +       PDV  Y +L++GLC++G    A
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 326

Query: 232 LNLFEEMANGNGEFGVVC---KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             L +EM+       +V     P   TYN ++ GL K+G + KA  L   +      PDV
Sbjct: 327 HKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY ++I G C AN   EA  L  EM   G  P+ VT   ++  LC+ G++D A  L+  
Sbjct: 387 VTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 446

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +   PN   Y +LIDG C +D++D A  +  +M   G   D  +Y  LI        
Sbjct: 447 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGR 506

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTL 434
           V EA+++Y EM+++G  P   T  TL
Sbjct: 507 VAEAMAMYDEMVARGFLPDGSTSKTL 532


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 234/446 (52%), Gaps = 20/446 (4%)

Query: 64  ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           A +  F KE C+             EA  +FD ML+    P  + +FN L   L K  + 
Sbjct: 186 AVISGFYKENCQI------------EAYHLFDEMLKQGICPD-ILTFNKLIHVLCKKGNV 232

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
                LF ++   G+ P+++T +I I   C+ G +     +L  I+    TP+ +++ +L
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I G C  S+++EA     K      EP+ FTYNT+ING C+ G    A  +  +      
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK-- 350

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
             G +  P+  TY+++I+GLC +G +++A  +F +  ++     ++ Y ++++G      
Sbjct: 351 --GFI--PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGL 406

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             +A +L  +MM+ G  PD+ T++++++ LCK G +  A+ +L   I +G  P+ +T+NT
Sbjct: 407 VLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LIDGYC    +D A ++  +M S+G   DV++YNTL+N  CK + ++  +  +  ML KG
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
             P ++TYN L     +  +V  A++LF EM+   +  D  T    I GLC +G + +A 
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAY 586

Query: 484 ELFRAI-RDSKYELNIVSYNCLIDGL 508
           ELF  I ++ K+  +   +N +I+  
Sbjct: 587 ELFVTIEKEYKFSYSTAIFNIMINAF 612



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 8/395 (2%)

Query: 114 FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF 173
            G   K +  + VL+  ++   + +   +Y    ++  + + G+V     V  R+     
Sbjct: 50  LGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIG--IMRDYGRKGKVQEAVNVFERMDFYDC 107

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            P+  ++ +++  L       +A  ++ + +     PDV+T+   +   C TG    AL 
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L   M  G G     C+ N V+Y  +I G  KE    +A  LF +M  + I PD++T+  
Sbjct: 168 LLNNMP-GQG-----CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I   C   +  E+++LF ++M +GV P++ TF++ +  LC+ G +D+A+RLLE ++  G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           + P+  +YNTLI G+C   K+  A      M ++G   +  +YNT+IN +CK   ++ A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +  + + KG  P   TY++L  GL     + RA+ +F E            YN  + GL
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            K G VL+AL+L + + +     +I +YN +++GL
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 188/412 (45%), Gaps = 47/412 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA C    M+     P   + +N +     K         + +     G  PD +T+S L
Sbjct: 304 EAECYLHKMVNSGVEPNEFT-YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C  G ++    V    +   F  + + + +L+KGL  +  +++A  L        C
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKPNTVTYNTIIDGLCKE 266
            PD++TYN ++NGLC+ G            ANG  N      C P+  T+NT+IDG CK+
Sbjct: 423 SPDIWTYNLVVNGLCKMGCL--------SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +DKA E+   M    I PDV+TY +++ G C A   +     F  M+++G  P+++T+
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY 534

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME- 385
           +++++  CK+ K+ +A  L + M  RG+ P+  T  TLI G C   ++D A +LFV++E 
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEK 594

Query: 386 -----------------------------------SNGCMHDVVSYNTLINWYCKNKDVE 410
                                               + C  D  +Y  +I+ YCK  +++
Sbjct: 595 EYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            A +   E +SKG+ P+  T   +   L   H++  A+ + + M +N +  +
Sbjct: 655 LAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 187/393 (47%), Gaps = 19/393 (4%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   L+K       L L K +   G  PDI+T+++++N  CKMG +S    +L   +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+  TF +LI G C +  + +A  +          PDV TYNTL+NGLC+     
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             ++ F+ M          C PN +TYN +I+  CK+  V +A ELF +MK   + PD+V
Sbjct: 514 NVVDTFKAMLEKG------CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           T  ++I G C   + ++A  LF+ +  +         F+++++  C+   +  A +L   
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M      P+ YTY  +ID YC T  ID A    +   S G +    +   ++N  C    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL-KLFDE--MRRNHVAADTYT 465
           + EA+ + + M+  GI P  V        +FE  + E A  K+  E  ++++H+    Y+
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVN------SIFEADKKEVAAPKIVVEYLLKKSHIT--YYS 739

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           Y    DG+ ++  V+EA  L   +   K +L +
Sbjct: 740 YELLYDGI-RNRKVVEARPLLYKVAYQKAKLQL 771



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 8/280 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
           AL +F ++   +G      K    TY  +I+ L   G  +  +++  +M+ +N++  ++ 
Sbjct: 23  ALKMFNQVKTEDG-----FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  ++R +       EA  +F  M     +P V +++ IM+ L + G   +A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ P+ YT+   +  +C+T +   A +L  +M   GC  + VSY  +I+ + K   
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
             EA  L+ EML +GI P ++T+N L   L +   V+ + KLF ++ +  V  + +T+N 
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FI GLC+ G + EA  L  +I       +++SYN LI G 
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGF 296


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 221/418 (52%), Gaps = 7/418 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ + D M+     P  V+  ++L G L +N  +D    +F+ +++ G+ PD+ + ++LI
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLL-RNGRWDKAREVFRAMDACGVAPDVRSFNMLI 271

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             FC+ G +         +     TP+ V+F+ LI        +  AA    + R F   
Sbjct: 272 GGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLM 331

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD   Y  +I G CR G  + AL + +EM      FG  C P+ VTYNT+++GLCKE  +
Sbjct: 332 PDGVIYTMVIGGFCRAGLMLEALRVRDEMV----AFG--CLPDVVTYNTLLNGLCKERRL 385

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A+EL  +MK+  + PD+ T+T++I G+C   +  +A + F  + DQ ++PD+VT++ +
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D +C+ G + KA+ L + M  R + PN  TY+ LID +C   ++D+A      M + G 
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + ++++YN++I  YC++ +V +      +M    + P ++TYNTL  G  +  ++  A  
Sbjct: 506 VPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFN 565

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L   M   +V  D  TYN  I G    G + EA  +++ +     E +  +Y  +I+G
Sbjct: 566 LLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 207/382 (54%), Gaps = 8/382 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN+L G   +    +  L  +K +    + PD+ + S LI  F + G + H    
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ V +T +I G C    ++EA  +  +   F C PDV TYNTL+NGLC+
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  L+  EE+ N   E GV   P+  T+ T+I G C++G ++KA + F  + D+ +
Sbjct: 382 ERR----LSDAEELLNEMKERGV--PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VTY ++I G C   D  +A  L+ +M  + + P+ VT+S+++D  C+ G++D A  
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ M+ +G+ PN  TYN++I GYC +  +   ++    M  +  M D+++YNTLI+ Y 
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAADT 463
           K   + EA +L   M ++ ++P  VTYN +  G F +H  ++ A  ++ +M    +  D 
Sbjct: 556 KEGKMHEAFNLLKIMENENVQPDAVTYNMIISG-FSVHGNMQEADWVYKKMGARGIEPDR 614

Query: 464 YTYNNFIDGLCKSGFVLEALEL 485
           YTY + I+G   +G   ++ +L
Sbjct: 615 YTYMSMINGHVVAGNSKKSFQL 636



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 204/399 (51%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+     K   +  V ++   +    +FPD+ TH+++++   + G V     ++  +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P  VT+ S++KGL    R  +A  +F         PDV ++N LI G CR G  
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL  ++EM       G    P+ V+++ +I    + G +D A E   +M++  + PD 
Sbjct: 281 EEALRFYKEMR------GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG 334

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT VI GFC A    EA R+  EM+  G  PDVVT++ +++ LCK  ++  A  LL  
Sbjct: 335 VIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNE 394

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P+  T+ TLI GYC    I+ A + F ++       D+V+YNTLI+  C+  D
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           + +A  L+ +M S+ I P  VTY+ L     E  QV+ A    DEM    +  +  TYN+
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+SG V +  +    +R  K   ++++YN LI G
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 195/374 (52%), Gaps = 7/374 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL  +  M R     P V SF+ L G   +    D      + +   GL PD   ++++
Sbjct: 282 EALRFYKEM-RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC+ G +     V   ++     P+ VT+ +L+ GLC E R+ +A  L  + +    
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+ T+ TLI+G CR G+   AL  F+ +++         +P+ VTYNT+IDG+C++G 
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR------LRPDIVTYNTLIDGMCRQGD 454

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KA EL+  M    I P+ VTY+ +I   C     + A     EM+++G+ P+++T++ 
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+   C++G + K  + L  M    V P+  TYNTLI GY    K+  A  L   ME+  
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D V+YN +I+ +  + +++EA  +Y +M ++GI+P   TY ++  G       +++ 
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSF 634

Query: 449 KLFDEMRRNHVAAD 462
           +L DEM +  +A D
Sbjct: 635 QLHDEMLQKGLAPD 648



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 176/339 (51%), Gaps = 6/339 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L S    N  T   ++   C   +  E   + ++       PDV T+N +++   R G 
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L + M +         KP  VTYN+++ GL + G  DKA+E+F  M    + PD
Sbjct: 210 VEAAMALIDSMVSKG------IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V ++  +I GFC A +  EA R + EM  + V PDVV+FS ++    + G+MD A+  L 
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+   Y  +I G+C    +  A ++   M + GC+ DVV+YNTL+N  CK +
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +A  L +EM  +G+ P + T+ TL  G      +E+AL+ FD +    +  D  TYN
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             IDG+C+ G + +A EL+  +   +   N V+Y+ LID
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 8/301 (2%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-PNTVTYNTIIDGLCKEG 267
           E + +T N +++  C+T         F E+     E    C  P+ VT+N ++D   + G
Sbjct: 156 EVNTYTLNIMVHSYCKTLQ-------FGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A  L   M  + I P +VTY SV++G      W++A+ +F  M   GV PDV +F+
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++   C+ G++++A R  + M  R V P+  +++ LI  +    ++DHA +    M   
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G M D V Y  +I  +C+   + EAL +  EM++ G  P VVTYNTL  GL +  ++  A
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L +EM+   V  D  T+   I G C+ G + +AL+ F  I D +   +IV+YN LIDG
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448

Query: 508 L 508
           +
Sbjct: 449 M 449



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 128/231 (55%), Gaps = 12/231 (5%)

Query: 285 NPDVVTYT--SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N +V TYT   ++  +C    + E   +  EM  + V PDVVT +V++D   + G ++ A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L++ M+ +G+ P   TYN+++ G     + D AR++F +M++ G   DV S+N LI  
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAA 461
           +C+  ++EEAL  Y EM  + + P VV+++ L +GLF    +++ A +   EMR   +  
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCL-IGLFTRRGEMDHAAEYLREMREFGLMP 332

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL----NIVSYNCLIDGL 508
           D   Y   I G C++G +LEAL     +RD         ++V+YN L++GL
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALR----VRDEMVAFGCLPDVVTYNTLLNGL 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 110/220 (50%)

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P    +  +IR +  +    EA   F  ++D  V       + ++  L + G     +  
Sbjct: 87  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
             L++      NTYT N ++  YC T +      +   ME      DVV++N +++   +
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             DVE A++L   M+SKGIKP +VTYN++  GL    + ++A ++F  M    VA D  +
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +N  I G C++G + EAL  ++ +R  +   ++VS++CLI
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 221/439 (50%), Gaps = 39/439 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P   ++N++   L K +       + K + +   + PD+ T+S +IN FCK G +     
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 164 VLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           +L  ++ R    P+ VT+TS++ GLC + ++  A  +  + ++   EPD FT++ LI G 
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVC--------------------------------K 250
           C       AL L++E+   +     V                                 K
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ VTY  +IDG CK G ++KA ++   M+     P+VVTY+S++ G C A D ++A  L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F  M  +G  P+VVT++ ++  LC   K+D A  L++ M       +T +YN L+DGYC 
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM-LSKGIKPTVV 429
             +I+ A++LF  M +  C+ D ++Y  L+  +C    +EEA  L   M  + GI P VV
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+ +  G     +   A +   EM   +VA +  TY++ IDGLCK+G V  A+E+ + +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426

Query: 490 RDSKYELNIVSYNCLIDGL 508
                  ++V+Y  +I+GL
Sbjct: 427 DKP----DVVTYTIVIEGL 441



 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 230/433 (53%), Gaps = 24/433 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLN---SAGLFPDIYT 144
           +EAL ++  +L        VSS  ++ G L + +       LF+ +         PD+ T
Sbjct: 133 DEALKLYKEILTSSCRLDAVSSSALITG-LCRERRIGEAYELFQEMEMREDGAWKPDVVT 191

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++ LI+ FCK G +     +LG +      PN VT++SL+ GLC    + +A  LF +  
Sbjct: 192 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 251

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+V TY TLI+GLC       A  L +EM          C  +TV+YN ++DG C
Sbjct: 252 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT------ATCCPADTVSYNALLDGYC 305

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD--QGVQPD 322
           + G +++AK+LF +M  ++  PD +TYT ++RGFC A+   EA R  +E M    G+ PD
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPD 364

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           VVT+S+++    +  +  +A+  ++ MI R V PN  TY++LIDG C   +++HA ++  
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           +++      DVV+Y  +I   C     EEAL+L  EM++K ++P+V T+N++   L  + 
Sbjct: 425 NVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLG 480

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR----DSKYELNI 498
            ++ A KL   M  + +     TY   ++G  ++G +  A ELF  +R     S    N+
Sbjct: 481 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540

Query: 499 V---SYNCLIDGL 508
           V   +++ LI GL
Sbjct: 541 VPEQAFSALIRGL 553



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 192/343 (55%), Gaps = 9/343 (2%)

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR-VFACEPDVFTYNTLINGLCRTGH 227
           +R    PN  T+  ++ GLC      +A  +  + R   +  PD+ TY+T+ING C+ G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  +  EM   +G       P+ VTY +++DGLC++G +D+A E+  +MK + + PD
Sbjct: 61  MDRACEILREMVTRDG-----MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPD 115

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             T++++I G+C A   +EA +L+ E++    + D V+ S ++  LC+  ++ +A  L +
Sbjct: 116 KFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQ 175

Query: 348 LMIWR---GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            M  R      P+  TY  LIDG+C +  ++ A K+   ME   C+ +VV+Y++L++  C
Sbjct: 176 EMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 235

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+++AL L+  M SKG  P VVTY TL  GL   H+V+ A  L DEM      ADT 
Sbjct: 236 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTV 295

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +YN  +DG C+ G + EA +LF+ +       + ++Y CL+ G
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRG 338



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 189/390 (48%), Gaps = 43/390 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K    D  L LF+R+ S G  P++ T++ LI+  C   +V    ++
Sbjct: 222 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 281

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +  +C   + V++ +L+ G C   RI EA  LF +    +C PD  TY  L+ G C 
Sbjct: 282 MDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN 341

Query: 225 TGHTIVALNLFEEMANGNG------EFGVVCK------------------------PNTV 254
                 A  L E M    G       + +V                          PN V
Sbjct: 342 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 401

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENIN-PDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           TY+++IDGLCK G V+ A E+      +N++ PDVVTYT VI G C  +   EA  L  E
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEE 456

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+++ V+P V TF+ ++  LC+ G MD+A +LL  M   G+ P   TY TL++G+  T +
Sbjct: 457 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516

Query: 374 IDHARKLFVSME-------SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           ++ A +LF  M        S   +    +++ LI   CK +++++A+++  E+ S+  +P
Sbjct: 517 MEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 576

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
                  +  GL    + E A KL + + +
Sbjct: 577 AEEDCLAIVDGLLRAGRTEEAGKLINSISK 606



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 128/232 (55%), Gaps = 5/232 (2%)

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIMDELCKNGKMD 340
           E + P+  TY  V+ G C A   ++A  +  EM D + V PD+VT+S +++  CK G+MD
Sbjct: 3   EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62

Query: 341 KASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           +A  +L  M+ R G+ P+  TY +++DG C   K+D A ++   M+  G   D  +++ L
Sbjct: 63  RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I  +C  + V+EAL LY E+L+   +   V+ + L  GL    ++  A +LF EM     
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182

Query: 460 AA---DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            A   D  TY   IDG CKSG + +A+++   +   K   N+V+Y+ L+ GL
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 17/262 (6%)

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
            +AG+ PD+ T+SI++  + +  R       +  ++     PNAVT++SLI GLC   R+
Sbjct: 357 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 416

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
             A  +         +PDV TY  +I GLC T  T  AL L EEM N   E      P+ 
Sbjct: 417 NHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVE------PSV 466

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
            T+N++I  LC+ G +D+A +L + M    + P +VTYT+++ GF        A  LF  
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 526

Query: 314 MMDQGVQPDVVT-------FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           M  +  +            FS ++  LCK  ++DKA  ++E +  R   P       ++D
Sbjct: 527 MRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVD 586

Query: 367 GYCLTDKIDHARKLFVSMESNG 388
           G     + + A KL  S+   G
Sbjct: 587 GLLRAGRTEEAGKLINSISKVG 608



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 40/260 (15%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + + M       P V +++I+    ++ K +       + + +  + P+  T+S 
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK GRV+H   VL  + +    P+ VT+T +I+GLC   R  EA  L  +     
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
            EP V T+N++I  LCR G    A  L   MA    E G+V                   
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521

Query: 249 --------------CKPNTV---TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
                            N V    ++ +I GLCK   +DKA  +  +++     P     
Sbjct: 522 ELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 581

Query: 292 TSVIRGFCYANDWNEAKRLF 311
            +++ G   A    EA +L 
Sbjct: 582 LAIVDGLLRAGRTEEAGKLI 601


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 228/417 (54%), Gaps = 8/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD MLR     P V++FN +   L +        +L  ++   G+  + +T +I 
Sbjct: 98  DARHLFDEMLR-RDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIW 156

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C+ GR+    V L   + +   P+ VT+ +L++GLC +S++ EAA    +     C
Sbjct: 157 IRGLCEGGRLEEA-VALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD FTYNT+I+G C+      A  L ++        G V  P+ VTY ++I+GLC EG 
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFK----GFV--PDRVTYCSLINGLCAEGD 269

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V++A ELF + + +++ PD+V Y S+++G C       A ++  EM++ G  PD+ T+++
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LCK G +  A+ ++   I +G  P+ +T+NT+IDGYC   K+D A +L   M   G
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D ++YN+++N  CK    +E    + EM+ KG +P  +TYN L     +I+Q+E A 
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            +   M ++ +  DT ++N  I G C++G +  A  LF+ + +  Y     ++N LI
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 208/438 (47%), Gaps = 42/438 (9%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV----- 158
           PP   ++N +   L    ++D    ++ R+ SAG+ PD  TH++ I  FC  GR      
Sbjct: 7   PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66

Query: 159 ---------------------------SHGF---VVLGRILRSCFTPNAVTFTSLIKGLC 188
                                       HG+    +   +LR    P+  TF +++  LC
Sbjct: 67  LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  IME+ AL  K        + FT N  I GLC  G    A+ L E M          
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-------DAY 179

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P+ VTYNT++ GLCK+  V +A +   +M ++   PD  TY ++I G+C  +   EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  + + +G  PD VT+  +++ LC  G +++A  L      + + P+   YN+L+ G 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    I HA ++   M  +GC  D+ +YN +IN  CK  ++ +A  + ++ + KG  P V
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            T+NT+  G  +  +++ AL+L + M    +A D  TYN+ ++GLCK+G   E  E F  
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 489 IRDSKYELNIVSYNCLID 506
           +       N ++YN LI+
Sbjct: 420 MILKGCRPNAITYNILIE 437



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 200/411 (48%), Gaps = 29/411 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K+          +R+ + G  PD +T++ +I+ +CK   +     +
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +   F P+ VT+ SLI GLCAE  +  A  LF + +    +PD+  YN+L+ GLCR
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCR 301

Query: 225 TGHTIVALNLFEEMA---------------NGNGEFGVVCK--------------PNTVT 255
            G  + AL +  EM                NG  + G +                P+  T
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +NT+IDG CK   +D A +L  +M    I PD +TY SV+ G C A    E    F EM+
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G +P+ +T++++++  CK  ++++AS ++  M   G+ P+T ++NTLI G+C    +D
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF  ++  G      ++N LI  Y    +++ A  ++ EM+SKG KP + TY  L 
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLV 541

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            G  +   V+RA     EM          T+   ++ L  +  V EA+ + 
Sbjct: 542 DGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAII 592



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 174/359 (48%), Gaps = 6/359 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L      +  L LF    +  L PD+  ++ L+   C+ G + H   V
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++     P+  T+  +I GLC    I +AA +     V    PDVFT+NT+I+G C+
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L E M      +G+   P+ +TYN++++GLCK G   +  E F +M  +  
Sbjct: 372 RLKLDSALQLVERM----WMYGIA--PDAITYNSVLNGLCKAGKAKEVNETFEEMILKGC 425

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +TY  +I  FC  N   EA  + + M   G+ PD ++F+ ++   C+NG +D A  
Sbjct: 426 RPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYL 485

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + +  +G +    T+N LI  Y     +  A K+F  M S G   D+ +Y  L++  C
Sbjct: 486 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSC 545

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           K  +V+ A    +EM+SKG  P++ T+  +   L   H+V  A+ +   M R  V  + 
Sbjct: 546 KAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 179/361 (49%), Gaps = 11/361 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L +       L +   +   G  PDI+T++I+IN  CKMG +S   VV
Sbjct: 287 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVV 346

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +   + P+  TF ++I G C   ++  A  L  +  ++   PD  TYN+++NGLC+
Sbjct: 347 MNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G        FEEM          C+PN +TYN +I+  CK   +++A  + ++M  + +
Sbjct: 407 AGKAKEVNETFEEMILKG------CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +++ ++I GFC   D + A  LF ++ ++G      TF++++        M  A +
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   MI +G  P+ YTY  L+DG C    +D A      M S G +  + ++  ++N   
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE-MRRNHVAADT 463
            N  V EA+++   M+  G+ P VV  +T+     +  ++     L +E M++ H++  T
Sbjct: 581 MNHRVSEAVAIIHIMVRMGVVPEVV--DTIL--STDKKEIAAPKILVEELMKKGHISYPT 636

Query: 464 Y 464
           Y
Sbjct: 637 Y 637



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 171/334 (51%), Gaps = 7/334 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P A  + +++  L   +   +A  ++ +       PD  T+   I   C TG   VAL L
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
              +     E G   KP  + Y T++ GL   G    A+ LF +M   ++ PDV T+ +V
Sbjct: 68  LRSLP----ERGCDVKP--LAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNV 121

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +   C   D  E+  L  +++ +G+  +  T ++ +  LC+ G++++A  L+E M    +
Sbjct: 122 LHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-I 180

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+  TYNTL+ G C   K+  A +    M + GC+ D  +YNT+I+ YCK   ++EA  
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  + + KG  P  VTY +L  GL     VERAL+LF+E +   +  D   YN+ + GLC
Sbjct: 241 LLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC 300

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + G +L AL++   + +     +I +YN +I+GL
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 1/191 (0%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P    ++ IMD L      D+A ++   M+  GV P+  T+   I  +C+T +   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            +L  S+   GC    ++Y T++     +    +A  L+ EML + + P V T+N +   
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +   +  +  L  ++ +  ++ + +T N +I GLC+ G + EA+ L  ++ D+    +
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPD 183

Query: 498 IVSYNCLIDGL 508
           +V+YN L+ GL
Sbjct: 184 VVTYNTLMRGL 194


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 234/446 (52%), Gaps = 20/446 (4%)

Query: 64  ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           A +  F KE C+             EA  +FD ML+     P + +FN L   L K  + 
Sbjct: 186 AVISGFYKENCQI------------EAYHLFDEMLK-QGICPDILTFNKLIHVLCKKGNV 232

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
                LF ++   G+ P+++T +I I   C+ G +     +L  I+    TP+ +++ +L
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I G C  S+++EA     K      EP+ FTYNT+ING C+ G    A  +  +      
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK-- 350

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
             G +  P+  TY+++I+GLC +G +++A  +F +  ++     ++ Y ++++G      
Sbjct: 351 --GFI--PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGL 406

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             +A +L  +MM+ G  PD+ T++++++ LCK G +  A+ +L   I +G  P+ +T+NT
Sbjct: 407 VLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LIDGYC    +D A ++  +M S+G   DV++YNTL+N  CK + ++  +  +  ML KG
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
             P ++TYN L     +  +V  A++LF EM+   +  D  T    I GLC +G + +A 
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAY 586

Query: 484 ELFRAI-RDSKYELNIVSYNCLIDGL 508
           ELF  I ++ K+  +   +N +I+  
Sbjct: 587 ELFVTIEKEYKFSYSTAIFNIMINAF 612



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 8/395 (2%)

Query: 114 FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF 173
            G   K +  + VL+  ++   + +   +Y    ++  + + G+V     V  R+     
Sbjct: 50  LGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIG--IMRDYGRKGKVQEAVNVFERMDFYDC 107

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            P+  ++ +++  L       +A  ++ + +     PDV+T+   +   C TG    AL 
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L   M  G G     C+ N V+Y  +I G  KE    +A  LF +M  + I PD++T+  
Sbjct: 168 LLNNMP-GQG-----CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I   C   +  E+++LF ++M +GV P++ TF++ +  LC+ G +D+A+RLLE ++  G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           + P+  +YNTLI G+C   K+  A      M ++G   +  +YNT+IN +CK   ++ A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +  + + KG  P   TY++L  GL     + RA+ +F E            YN  + GL
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            K G VL+AL+L + + +     +I +YN +++GL
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 188/412 (45%), Gaps = 47/412 (11%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA C    M+     P   + +N +     K         + +     G  PD +T+S L
Sbjct: 304 EAECYLHKMVNSGVEPNEFT-YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C  G ++    V    +   F  + + + +L+KGL  +  +++A  L        C
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKPNTVTYNTIIDGLCKE 266
            PD++TYN ++NGLC+ G            ANG  N      C P+  T+NT+IDG CK+
Sbjct: 423 SPDIWTYNLVVNGLCKMGCL--------SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +DKA E+   M    I PDV+TY +++ G C A   +     F  M+++G  P+++T+
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY 534

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME- 385
           +++++  CK+ K+ +A  L + M  RG+ P+  T  TLI G C   ++D A +LFV++E 
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEK 594

Query: 386 -----------------------------------SNGCMHDVVSYNTLINWYCKNKDVE 410
                                               + C  D  +Y  +I+ YCK  +++
Sbjct: 595 EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNID 654

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            A +   E +SKG+ P+  T   +   L   H++  A+ + + M +N +  +
Sbjct: 655 LAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 202/448 (45%), Gaps = 25/448 (5%)

Query: 36  SSISENEPSYPTTTSKLKESLRLTVKDR----ASLKKFLKERCKSSG--QGDINLITPNE 89
           S +  NE +Y T  +   ++  +   D+    A  K F+ +    S    G  N    N 
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +F Y          +  +N L   L+K       L L K +   G  PDI+T+++++
Sbjct: 375 AMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CKMG +S    +L   +     P+  TF +LI G C +  + +A  +          
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV TYNTL+NGLC+       ++ F+ M          C PN +TYN +I+  CK+  V
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG------CTPNIITYNILIESFCKDRKV 547

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSV 328
            +A ELF +MK   + PD+VT  ++I G C   + ++A  LF+ +  +         F++
Sbjct: 548 SEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNI 607

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++  C    +  A +L   M      P+ YTY  +ID YC T  ID A    +   S G
Sbjct: 608 MINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKG 667

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            +    +   ++N  C    + EA+ + + M+  GI P  V        +FE  + E A 
Sbjct: 668 LVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN------SIFEADKKEVAA 721

Query: 449 -KLFDE--MRRNHVAADTYTYNNFIDGL 473
            K+  E  ++++H+    Y+Y    DG+
Sbjct: 722 PKIVVEYLLKKSHIT--YYSYELLYDGI 747



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 8/280 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
           AL +F ++   +G      K    TY  +I+ L   G  +  +++  +M+ +N++  ++ 
Sbjct: 23  ALKMFNQVKTEDG-----FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  ++R +       EA  +F  M     +P V +++ IM+ L + G   +A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ P+ YT+   +  +C+T +   A +L  +M   GC  + VSY  +I+ + K   
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
             EA  L+ EML +GI P ++T+N L   L +   V+ + KLF ++ +  V  + +T+N 
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FI GLC+ G + EA  L  +I       +++SYN LI G 
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGF 296


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 216/434 (49%), Gaps = 30/434 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K +  D    + +++    + PD  T++ +I+ +  +GR      +
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    P+ VTF SL+  LC   R  EAA +F        +PD+ +Y+ L++G   
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 225 TGHTIVALNLFEEMA---------------NGNGEFGVV--------------CKPNTVT 255
            G  +   NLF  M                N + + G++                PN VT
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y T+I  LC+ G +  A E   +M    + P+ V Y S+I+GFC   D  +AK L  EMM
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 316 DQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           DQG+ +P++  FS I+  LC  G++  A  +  L+I  G  P+ +T+N+LIDGYCL  K+
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A  +  +M S G   DVV+Y+TLIN Y K+  +++ L L+ EML K +KPT VTY+ +
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLV 664

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF   +   A K+F EM  +  A    TY   + GLC++    EA+ LF  +     
Sbjct: 665 LDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNL 724

Query: 495 ELNIVSYNCLIDGL 508
           +  I   N +I  L
Sbjct: 725 KFEIAILNTMIHAL 738



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 13/430 (3%)

Query: 86  TPNEALCIFDYMLRMHPSPP----PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
            P  A+ +F+ + R    P      V ++ IL  C  + +  D   + F RL  AGL  D
Sbjct: 140 APALAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTD 199

Query: 142 IYTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
               +  + C C   R      ++L R+      P+A ++ ++IK LC  SR  EA  + 
Sbjct: 200 GIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDML 259

Query: 201 TKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
            +  +   C PDV +Y  +I+GL   G    A NLF EM     + GVV  PN VTYN+I
Sbjct: 260 LRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMV----QKGVV--PNVVTYNSI 313

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +  LCK   +DKA+ +  +M D +I PD VTYT++I G+     W EA ++F EM  +G+
Sbjct: 314 VHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGL 373

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD+VTF+ +MD LCK+ +  +A+ +   +  +G  P+  +Y+ L+ GY    +      
Sbjct: 374 IPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNN 433

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF SM  NG + D   +N LIN + K   ++EAL +++EM  +G+ P VVTY T+   L 
Sbjct: 434 LFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALC 493

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNI 498
            + ++  A++   +M    +  +T  Y++ I G C  G +++A EL   + D      NI
Sbjct: 494 RMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNI 553

Query: 499 VSYNCLIDGL 508
             ++ +I  L
Sbjct: 554 TFFSSIIHSL 563



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 192/388 (49%), Gaps = 5/388 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S++IL    A    +  + +LF  +   G+  D +  +ILIN   K G +    ++
Sbjct: 410 PDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLI 469

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +PN VT+ ++I  LC   R+ +A    ++      +P+   Y++LI G C 
Sbjct: 470 FTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCT 529

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  I A  L  EM +       + +PN   +++II  LC EG V  A+++F  +     
Sbjct: 530 HGDLIKAKELVSEMMDQG-----IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+ S+I G+C     ++A  +   M+  G +PDVVT+S +++   K+G++D    
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+ + V P T TY+ ++DG     +   A+K+F  M  +G    + +Y  ++   C
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +N   +EA++L+ ++ +  +K  +   NT+   L+++ + E A  LF  +  + +  +  
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TY   I  L K G V EA  +F ++  +
Sbjct: 765 TYGVMIINLLKEGSVEEADIMFSSMEKT 792



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 188/374 (50%), Gaps = 7/374 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNIL    AK    D  L +F  +   G+ P++ T++ +I   C+MGR++     L +++
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC-EPDVFTYNTLINGLCRTGHT 228
                PN V + SLI+G C    +++A  L ++        P++  ++++I+ LC  G  
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A ++F      N    +  +P+  T+N++IDG C  G +DKA  +   M      PDV
Sbjct: 570 MNAQDVF------NLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY+++I G+  +   ++   LF EM+ + V+P  VT+S+++D L + G+   A ++   
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           MI  G   +  TY  ++ G C  +  D A  LF  + +     ++   NT+I+   K K 
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKR 743

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  L++ + + G+ P   TY  + + L +   VE A  +F  M +   A  +   N+
Sbjct: 744 REEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLND 803

Query: 469 FIDGLCKSGFVLEA 482
            I  L + G +++A
Sbjct: 804 IIRMLLQKGEIVKA 817



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 55/125 (44%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +S++ I+   L +N   D  ++LF +L +  L  +I   + +I+   K+ R      +  
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  S   PNA T+  +I  L  E  + EA  +F+      C P     N +I  L + G
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812

Query: 227 HTIVA 231
             + A
Sbjct: 813 EIVKA 817


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 188/361 (52%), Gaps = 6/361 (1%)

Query: 130  FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            F  +   G+ PD   ++ L++ FCK G +         +     TP+ +T+T++I G C 
Sbjct: 762  FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821

Query: 190  ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
               ++EA  LF +      EPD+ T+  L+NG C+ GH   A  +   M          C
Sbjct: 822  IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG------C 875

Query: 250  KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             PN VTY T+IDGLCKEG +D A EL  +M    + P++ TY S++ G C + +  EA +
Sbjct: 876  SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            L  E    G+  D VT++ +MD  CK+G+MDKA  +L  M+ +G+ P   T+N L++G+C
Sbjct: 936  LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFC 995

Query: 370  LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            L   ++   KL   M + G   +  ++N L+  YC   +++ A ++Y +M S+G++P   
Sbjct: 996  LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055

Query: 430  TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            TY  L  G      ++ A  LF EM+    +    TY+  I G  K    +EA E+F  +
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115

Query: 490  R 490
            R
Sbjct: 1116 R 1116



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 214/400 (53%), Gaps = 7/400 (1%)

Query: 107  VSSFNILFGCLAKN-KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
            V S N+    L+K+     T + +F+     G+  ++ +++I+I+  C++GR++    +L
Sbjct: 633  VDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLL 692

Query: 166  GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
              +    +TP+ ++++++I G C    + +   L  K +    +P+ +TY ++I  LCR 
Sbjct: 693  LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRI 752

Query: 226  GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                 A   F EM  G G       P+T+ Y T++DG CK G +  A + F +M   +I 
Sbjct: 753  CKLAEAEEAFSEMI-GQGIL-----PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT 806

Query: 286  PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            PDV+TYT++I GFC   D  EA +LF EM+ +G++PD++TF+ +M+  CK G +  A R+
Sbjct: 807  PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866

Query: 346  LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
               MI  G +PN  TY TLIDG C    +D A +L   M   G   ++ +YN+++N  CK
Sbjct: 867  HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 926

Query: 406  NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            + ++EEA+ L  E  + G+    VTY TL     +  ++++A ++  EM    +     T
Sbjct: 927  SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVT 986

Query: 466  YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            +N  ++G C  G + +  +L   +       N  ++NCL+
Sbjct: 987  FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 195/343 (56%), Gaps = 6/343 (1%)

Query: 129  LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
             F  ++S  + PD+ T++ +I+ FC++G +     +   +L     P+ +TFT L+ G C
Sbjct: 796  FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855

Query: 189  AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                I +A  +        C P+V TY TLI+GLC+ G    A  L  EM      + + 
Sbjct: 856  KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIG 909

Query: 249  CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             +PN  TYN+I++GLCK G +++A +L  + +   +N D VTYT+++  +C + + ++A+
Sbjct: 910  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969

Query: 309  RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             +  EM+ +G+QP +VTF+V+M+  C +G ++   +LL  M+ +G+ PN  T+N L+  Y
Sbjct: 970  EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029

Query: 369  CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
            C+ + +  A  ++  M S G   D  +Y  L+  +C  ++++EA  L+ EM  KG   +V
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSV 1089

Query: 429  VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             TY+ L  G F+  +   A ++FD+MRR+ +AAD   ++ F D
Sbjct: 1090 STYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSD 1132



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 222/437 (50%), Gaps = 41/437 (9%)

Query: 107  VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
            V+S+NI+   + +    +    L   +   G  PD+ ++S +IN +C+ G +   + ++ 
Sbjct: 669  VASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIE 728

Query: 167  RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++ +    PN+ T+ S+I  LC   ++ EA   F++       PD   Y TL++G C+ G
Sbjct: 729  KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788

Query: 227  HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                A   F EM + +        P+ +TY  II G C+ G + +A +LF +M    + P
Sbjct: 789  DIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP 842

Query: 287  DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            D++T+T ++ G+C A    +A R+   M+  G  P+VVT++ ++D LCK G +D A+ LL
Sbjct: 843  DIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 902

Query: 347  ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
              M   G+ PN +TYN++++G C +  I+ A KL    E+ G   D V+Y TL++ YCK+
Sbjct: 903  HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 962

Query: 407  KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM------------ 454
             ++++A  + +EML KG++PT+VT+N L  G      +E   KL + M            
Sbjct: 963  GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022

Query: 455  ---------RRNHVAA--------------DTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
                     R N  AA              D  TY N + G C +  + EA  LF+ ++ 
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKG 1082

Query: 492  SKYELNIVSYNCLIDGL 508
              + +++ +Y+ LI G 
Sbjct: 1083 KGFSVSVSTYSVLIKGF 1099



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 201/400 (50%), Gaps = 7/400 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK-MGRVSHGFVVLGRI 168
           F++ F  L +         +F+++ + GL   + + ++ +    K   + +   +V    
Sbjct: 601 FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF 660

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N  ++  +I  +C   RI EA  L     +    PDV +Y+T+ING CR G  
Sbjct: 661 PEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL 720

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                L E+M           KPN+ TY +II  LC+   + +A+E F +M  + I PD 
Sbjct: 721 DKVWKLIEKMKQKG------LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           + YT+++ GFC   D   A + F EM  + + PDV+T++ I+   C+ G M +A +L   
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ RG+ P+  T+  L++GYC    I  A ++   M   GC  +VV+Y TLI+  CK  D
Sbjct: 835 MLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A  L  EM   G++P + TYN++  GL +   +E A+KL  E     + ADT TY  
Sbjct: 895 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +D  CKSG + +A E+   +     +  IV++N L++G 
Sbjct: 955 LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 6/236 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + ++N +   L K+ + +  + L     +AGL  D  T++ L++ +CK G +     +
Sbjct: 912  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L  +L     P  VTF  L+ G C    + +   L          P+  T+N L+   C 
Sbjct: 972  LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI 1031

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +   A  ++++M +   E      P+  TY  ++ G C    + +A  LF +MK +  
Sbjct: 1032 RNNLKAATAIYKDMCSRGVE------PDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +  V TY+ +I+GF     + EA+ +F +M   G+  D   F    D   K  + D
Sbjct: 1086 SVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPD 1141


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 218/443 (49%), Gaps = 67/443 (15%)

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           R  +  + PDI T  ILI+C C  G ++ GF  LG+I+++    +AV FT L++ LCA+ 
Sbjct: 3   RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKK 62

Query: 192 RIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------- 242
           R  +A  +  +      C PDVF+Y+TL+ GLC       A  L   MA           
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVV 122

Query: 243 ------------GEFG----VVCK-------PNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
                       G+ G    + CK       PN VT N++IDGLCK   +DKA+ +  +M
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            DE+I P+  TY S+I G+  +  W EA R+  EM   G +P+VVT+++++D LCK+G  
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDG-------------------------------- 367
            +A  +   MI  G  P+  TY +L+ G                                
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIE 302

Query: 368 ---YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
              YC   ++D A   F+ M+  G M D+V+Y T+I+  CK   +++A+S + +M+  G+
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P ++T+ TL  G     + E+A +LF EM    +  D   +   ID L K G V EA +
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           LF  +  +  + N+VSYN +I G
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHG 445



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 207/417 (49%), Gaps = 11/417 (2%)

Query: 97  MLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDIYTHSILINC 151
           +LR  P     P V S++ L   L   K  +    L   +   G    PD+ ++S +I+ 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           F K G V   + +  ++L     PN VT  S+I GLC    + +A A+  +       P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             TYN+LI+G   +G    A+ + +EM+  +G+     +PN VTYN +ID LCK GF  +
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSR-DGQ-----RPNVVTYNMLIDCLCKSGFHAE 244

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A+E+F  M      PD  TY S++ G+    +  E   +   M+  G++ +  TFS+ + 
Sbjct: 245 AREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIY 304

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK G++D+AS     M   G  P+  TY T+IDG C   ++D A   F  M  +G   
Sbjct: 305 AYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 364

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           +++++ TLI+ +      E+A  L+ EM+ +GI P V  +  +   LF+  +V  A KLF
Sbjct: 365 NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D M R     +  +YN  I G   +G V E ++L   +     +   V++N L+DG+
Sbjct: 425 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 199/419 (47%), Gaps = 53/419 (12%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+      +A  +F  ML  H  PP V + N +   L K +  D   ++ +++    +
Sbjct: 134 EGDVG-----KAYTLFCKMLD-HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+  T++ LI+ +   G+ +    +L  + R    PN VT+  LI  LC      EA  
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEARE 247

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------EFGVV 248
           +F        +PD  TY +L++G    G+ +V +N  +++   NG          E    
Sbjct: 248 IFNSMIQSGPKPDATTYGSLLHGYATEGN-LVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 249 CK--------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           CK                    P+ VTY T+IDGLCK G +D A   F +M D+ ++P++
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +T+T++I GF     W +A+ LF EMMD+G+ PDV  F+ ++D L K GK+ +A +L +L
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G  PN  +YNT+I GY +  ++    KL   M   G     V++NTL++       
Sbjct: 427 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG------ 480

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
                     M+S G+KP V T  TL     E  ++E  L LF EM       DT T N
Sbjct: 481 ----------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 25/239 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +F+I      K    D     F ++   G  PDI T++ +I+  CK+GR+        ++
Sbjct: 298 TFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 357

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +PN +TFT+LI G     +  +A  LF +       PDV  +  +I+ L + G  
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKV 417

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF-------LK--- 278
             A  LF+ M           KPN V+YNT+I G    G V +  +L        LK   
Sbjct: 418 TEAQKLFDLMPRAGA------KPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTA 471

Query: 279 ---------MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
                    M    + PDV T  ++I   C      +   LF EM+ +  + D +T ++
Sbjct: 472 VTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 210/391 (53%), Gaps = 29/391 (7%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N +   L KN        L + +   G+FPD   ++ +I+ FCK+G VS    +   + 
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R    P+ VT+TS+I G+C   +++EA  +F +  V   EPD  TY  LI+G C+ G   
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434

Query: 230 VALNLFEEM---------------ANG---NGEFGVV-----------CKPNTVTYNTII 260
            A ++  +M               A+G   NGE  V             +PN  TYNTI+
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +GLCK G +++  +L  +M      PD +TYT+++  +C   +  +A  L   M+++ +Q
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ 554

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P +VTF+V+M+  C +G ++   RL+E M+ +G+ PN  T+N+L+  YC+ + +    ++
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           + +M   G M D  +YN LI  +CK ++++EA  L+ EM+ KG   T  TY+ L  G ++
Sbjct: 615 YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYK 674

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             +   A KLF+EMR++ + A+   Y+ F+D
Sbjct: 675 RKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 215/399 (53%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S NI+  CL +        +L  ++   G FPD+ ++ ++++ +C++G +     ++  +
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 P+   + ++I  LC    ++EA  L    R +   PD   Y T+I+G C+ G+ 
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LF+EM            P+ VTY ++I G+CK G + +A+E+F +M  + + PD 
Sbjct: 364 SAACKLFDEMRRKK------IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDE 417

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT++I G+C A +  EA  +  +M+ +G+ P+VVT++ + D LCKNG++D A+ LL  
Sbjct: 418 VTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHE 477

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+ PN YTYNT+++G C    I+   KL   M+  G   D ++Y TL++ YCK  +
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           + +A  L   ML+K ++PT+VT+N L  G      +E   +L + M    +  +  T+N+
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   C    +    E+++A+ D     +  +YN LI G
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 199/385 (51%), Gaps = 6/385 (1%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D VL L   L   GL PD Y ++ +I   CK G V     +L  + +    P+ V +T++
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I G C    +  A  LF + R     PD+ TY ++I+G+C++G  + A  +F EM     
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           E      P+ VTY  +IDG CK G + +A  +  +M  + + P+VVTYT++  G C   +
Sbjct: 414 E------PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            + A  L  EM  +G+QP+V T++ I++ LCK G +++  +L+E M   G  P+T TY T
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L+D YC   ++  A +L   M +      +V++N L+N +C +  +E+   L   ML KG
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           I P   T+N+L       + +    +++  M    V  D+ TYN  I G CK+  + EA 
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            L + + +  Y +   +Y+ LI G 
Sbjct: 648 FLHKEMVEKGYSVTAATYDALIRGF 672



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 7/400 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF-CKMGRVSHGFVVLGRI 168
           F++ F  L +N        LF +L   G+   + + ++ ++   C    +     V    
Sbjct: 174 FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEF 233

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N V+   ++  LC   ++ EA  L  +       PDV +Y  +++G CR G  
Sbjct: 234 PELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL 293

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
              L L +E+  G G      KP+   YN II  LCK G V +A++L   M+   + PD 
Sbjct: 294 DKVLKLVDEL-KGKG-----LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT+VI GFC   + + A +LF EM  + + PD+VT++ ++  +CK+GKM +A  +   
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +G+ P+  TY  LIDGYC   ++  A  +   M   G   +VV+Y  L +  CKN +
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A  L  EM  KG++P V TYNT+  GL +I  +E+ +KL +EM       DT TY  
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +D  CK G + +A EL R + + + +  +V++N L++G 
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 191/374 (51%), Gaps = 12/374 (3%)

Query: 141 DIYTHSILINCFCKMGR--VSHGFVVLGRILRSCFT---PNAVTFTSLIKGLCAESRIME 195
           DI T   L+  FC   +  VS  F +   +L   +     + + F    + L     ++E
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLE 189

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGL-CRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           A  LF K   +     V + N  ++ L C      +A+ +FEE      E GV    NTV
Sbjct: 190 AQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCW--NTV 243

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           + N ++  LC+ G V +A  L ++M D    PDVV+Y  V+ G+C   + ++  +L  E+
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             +G++PD   ++ I+  LCKNG++ +A +LL  M   GV P+   Y T+I G+C    +
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A KLF  M     + D+V+Y ++I+  CK+  + EA  +++EML KG++P  VTY  L
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G  +  +++ A  + ++M +  +  +  TY    DGLCK+G +  A EL   +     
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483

Query: 495 ELNIVSYNCLIDGL 508
           + N+ +YN +++GL
Sbjct: 484 QPNVYTYNTIVNGL 497


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/424 (31%), Positives = 222/424 (52%), Gaps = 15/424 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M R   +P PP+  ++++     +   + + + + + L++ G   D+   ++
Sbjct: 140 DALAVLDEMPRRGCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNL 197

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C  G V     +L  +      P+ V++ +++KGLC   R      L  +    A
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI+ LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 258 CPPNIVTFNTLISYLCRNG-------LFERVHEVLAQMVEHG--CTPDIRMYATIIDGIC 308

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y ++++G C A  W E + L  EM D+    D V
Sbjct: 309 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+ RG  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            + GC  + +SY  ++   C  +   +A  L S+M+ +G     +T+NTL   L +   V
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+ +
Sbjct: 489 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548

Query: 505 IDGL 508
              L
Sbjct: 549 ASAL 552



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 211/405 (52%), Gaps = 12/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + N++   +      D  L L + L S G  PD+ +++ ++   C   R      ++ 
Sbjct: 192 VGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME 251

Query: 167 RILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            ++R    PN VTF +LI  LC      R+ E  A   +H    C PD+  Y T+I+G+C
Sbjct: 252 EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH---GCTPDIRMYATIIDGIC 308

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + GH  VA  +   M +    +G+  KPN V YNT++ GLC     ++ +EL  +M D++
Sbjct: 309 KEGHLEVAHEILNRMPS----YGL--KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D VT+  ++  FC     +    L  +M+++G  PDV+T++ +++  CK G +D+A 
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+ M   G  PNT +Y  ++ G C  ++   A  L   M   GC  + +++NTLIN+ 
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   VE+A+ L  +ML  G  P +++Y+T+  GL +  + + AL+L + M    ++ +T
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y++    L + G + + +++F  I+D+    + V YN +I  L
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 206/416 (49%), Gaps = 9/416 (2%)

Query: 96  YMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++LR  PS    P V S+N +   L   K +  V  L + +      P+I T + LI+  
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G       VL +++    TP+   + ++I G+C E  +  A  +  +   +  +P+V
Sbjct: 273 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 332

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YNTL+ GLC          L  EM      F   C  + VT+N ++D  C+ G VD+ 
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEM------FDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL  +M +    PDV+TYT+VI GFC     +EA  L   M   G +P+ +++++++  
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC   +   A  L+  MI +G   N  T+NTLI+  C    ++ A +L   M  NGC  D
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           ++SY+T+I+   K    +EAL L + M++KG+ P  + Y+++   L    ++ + +++FD
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++   + +D   YN  I  LCK G    A+E    +  S    N  +Y  LI GL
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 200/394 (50%), Gaps = 7/394 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+RM   PP + +FN L   L +N  ++ V  +  ++   G  PDI  ++ +I+  
Sbjct: 249 LMEEMVRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 307

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     +L R+      PN V + +L+KGLC+  R  E   L  +     C  D 
Sbjct: 308 CKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+N L++  C+ G     + L E+M     E G  C P+ +TY T+I+G CKEG +D+A
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQML----ERG--CMPDVITYTTVINGFCKEGLIDEA 421

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L   M      P+ ++YT V++G C A  W +A+ L  +M+ QG   + +TF+ +++ 
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF 481

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G +++A  LL+ M+  G +P+  +Y+T+IDG     K D A +L   M + G   +
Sbjct: 482 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + Y+++ +   +   + + + ++  +    I+   V YN +   L +  + ERA++   
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            M  +    +  TY   I GL   GFV EA E+ 
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 149/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++   G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +++T ++KGLC+  R ++A  L ++     C  +  T+NTLIN LC+ G  
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  D+A EL   M ++ ++P+
Sbjct: 489 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK G+ ++A   L 
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G      +  A+++   + S G + 
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 645



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   L   + ++    L   +       D  T +IL++ FC+ G V     +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     P+ +T+T++I G C E  I EA  L        C+P+  +Y  ++ GLC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A +L  +M          C  N +T+NT+I+ LCK+G V++A EL  +M     
Sbjct: 450 AERWVDAEDLMSQMIQQG------CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD+++Y++VI G   A   +EA  L   M+++G+ P+ + +S I   L + G+++K  +
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + +    +  +   YN +I   C   + + A +    M S+GC+ +  +Y  LI    
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623

Query: 405 KNKDVEEALSLYSEMLSKG 423
               V+EA  + +E+ SKG
Sbjct: 624 SEGFVKEAQEMLTELCSKG 642



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 12/331 (3%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
            +V  +SLI+ LCA  R  EAA   +     A    V  YN ++ G CR G    A  L 
Sbjct: 57  GSVRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLA 113

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                      V   PN  TY  ++  LC  G +  A  +  +M      P    Y  ++
Sbjct: 114 A---------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVIL 164

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
              C    +  A R+  ++  +G   DV   +++++ +C  G +D+A  LL  +   G  
Sbjct: 165 EAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE 224

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+  +YN ++ G C+  +    ++L   M    C  ++V++NTLI++ C+N   E    +
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            ++M+  G  P +  Y T+  G+ +   +E A ++ + M    +  +   YN  + GLC 
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           +    E  EL   + D    L+ V++N L+D
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVD 375



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 3/253 (1%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN ++ G C+ G ++ A+ L   +    + P+  TY  V+R  C      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G  P    + VI++  C+ G    A R+LE +  RG   +    N +++  C    +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   + S GC  DVVSYN ++   C  K       L  EM+     P +VT+NTL 
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L      ER  ++  +M  +    D   Y   IDG+CK G +  A E+   +     +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 496 LNIVSYNCLIDGL 508
            N+V YN L+ GL
Sbjct: 330 PNVVCYNTLLKGL 342


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/402 (34%), Positives = 200/402 (49%), Gaps = 55/402 (13%)

Query: 126 VLSLFKRLNSAG-----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
            ++LF R  S       L P  YT++IL++C  +  R        G++LR+    +A+  
Sbjct: 56  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIA 115

Query: 181 TSLIKGLCAESRIMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           + L+KG C   R  EA  +   HR     C PDVF+YN L+  LC  G +  A NL   M
Sbjct: 116 SHLLKGFCEAKRTDEALDILL-HRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMM 174

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
           A G    G VC P+ V YNT+IDG  KEG V+KA +LF +M    I PD+VTY SV+   
Sbjct: 175 AEG----GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 230

Query: 299 CYA-----------------------------------NDWNEAKRLFIEMMDQGVQPDV 323
           C A                                     W EA R+F EM    + PDV
Sbjct: 231 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 290

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARK 379
           VT S++M  LCK GK+ +A  + + M  +G NP+ ++YN +++GY    CL D  D    
Sbjct: 291 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD---- 346

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF  M  +G   D  ++N  I  Y     +++A+ +++EM   G+KP VVTY T+   L 
Sbjct: 347 LFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 406

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            I +++ A++ F++M    VA D Y YN  I G C  G +L+
Sbjct: 407 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLK 448



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 12/259 (4%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N     +A  +F  M++    PP + ++N +   L K +  D   +  +++ +  +
Sbjct: 198 EGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 251

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++ LI  +   G+      V   + R    P+ VT + L+  LC   +I EA  
Sbjct: 252 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 311

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +F    +    PDVF+YN ++NG    G  +   +LF+ M  G+G       P+  T+N 
Sbjct: 312 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDG-----IAPDFYTFNV 365

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            I      G +DKA  +F +M+D  + PDVVTY +VI   C     ++A   F +M+DQG
Sbjct: 366 QIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 425

Query: 319 VQPDVVTFSVIMDELCKNG 337
           V PD   ++ ++   C +G
Sbjct: 426 VAPDKYAYNCLIQGFCTHG 444



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 9/231 (3%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++P   TY  ++     A+    A   F +++  G++ D +  S ++   C+  + D+A 
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA- 131

Query: 344 RLLELMIWR----GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG--CMHDVVSYN 397
             L++++ R    G  P+ ++YN L+   C   K   A  L   M   G  C  DVV+YN
Sbjct: 132 --LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYN 189

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           T+I+ + K  DV +A  L+ EM+ +GI P +VTYN++   L +   +++A     +M   
Sbjct: 190 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 249

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V  + +TYNN I G   +G   EA+ +F+ +R      ++V+ + L+  L
Sbjct: 250 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 300



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 7/187 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R H   P V + ++L G L K         +F  +   G  PD+++++I+
Sbjct: 273 EAVRVFKEM-RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 331

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N +   G +     +   +L     P+  TF   IK       + +A  +F + R    
Sbjct: 332 LNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGV 391

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY T+I  LCR G    A+  F +M +     GV   P+   YN +I G C  G 
Sbjct: 392 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ----GVA--PDKYAYNCLIQGFCTHGI 445

Query: 269 VDKAKEL 275
           + K + +
Sbjct: 446 LLKTQGI 452



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 2/121 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P   +FN+     A     D  + +F  +   G+ PD+ T+  +I   
Sbjct: 347 LFDLMLG-DGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 405

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKHRVFACEPD 211
           C++G++        +++     P+   +  LI+G C    +++   + F  + + A   D
Sbjct: 406 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMALHLD 465

Query: 212 V 212
           +
Sbjct: 466 I 466


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 209/377 (55%), Gaps = 8/377 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IF  ML    SP  +S F+ L G  ++N H D  L  F+ + ++GL PD   ++IL
Sbjct: 308 EAKDIFSDMLHRGVSPDLIS-FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN +C+ G +S    +  ++L      + V + +++ GLC +  + +A ALF +      
Sbjct: 367 INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+ TLI+G C+ G+   AL+LF  M   N       KP+ VTYN +IDG CK   
Sbjct: 427 VPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN------IKPDIVTYNILIDGFCKTTE 480

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++KA EL+ +M    I P+ ++Y  ++ G+C     +EA RL+ EM+ +G++P +VT + 
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C++G + KA   L  MI  GV P++ TYNTLI+G+   + +D A  L   ME+ G
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+YN ++N +C+   ++EA  +  +M+ +GI P   TY TL  G      ++ A 
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAF 660

Query: 449 KLFDEM-RRNHVAADTY 464
           +  DEM +R  V  D +
Sbjct: 661 RFHDEMLQRGFVPDDDF 677



 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 214/432 (49%), Gaps = 33/432 (7%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NI+   L K+   D V      +   G+F DI T++ LIN +C+ G +   F V+ 
Sbjct: 185 VYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMN 244

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P   T+ ++I GLC + R + A  +F +       PD  TYNTL+   CR  
Sbjct: 245 SMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNN 304

Query: 227 HTIVALNLFEEM------------------ANGNGEF-------------GVVCKPNTVT 255
           + + A ++F +M                  ++ NG               G+V  P+ V 
Sbjct: 305 NFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV--PDNVI 362

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  +I+G C+ G + +A E+  KM ++    DVV Y +++ G C      +A  LF EM+
Sbjct: 363 YTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMV 422

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++GV PD  TF+ ++   CK G M KA  L  +M  + + P+  TYN LIDG+C T +++
Sbjct: 423 ERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEME 482

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +L+  M S     + +SY  L+N YC    V EA  L+ EM+ KGIKPT+VT NT+ 
Sbjct: 483 KANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G      + +A +   +M    V  D+ TYN  I+G  K  ++ +A  L   +     +
Sbjct: 543 KGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQ 602

Query: 496 LNIVSYNCLIDG 507
            ++V+YN +++G
Sbjct: 603 PDVVTYNVILNG 614



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 207/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L K   Y     +F  + S GL PD  T++ L+   C+         +
Sbjct: 253 PTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDI 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L    +P+ ++F+SLI        + +A   F   +     PD   Y  LING CR
Sbjct: 313 FSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCR 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + ++M     E G  C  + V YNTI++GLCK+  +  A  LF +M +  +
Sbjct: 373 NGMMSEALEIRDKML----EQG--CALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+T++I G C   +  +A  LF  M  + ++PD+VT+++++D  CK  +M+KA+ 
Sbjct: 427 VPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANE 486

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI R + PN  +Y  L++GYC    +  A +L+  M   G    +V+ NT+I  YC
Sbjct: 487 LWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ D+ +A     +M+S+G+ P  +TYNTL  G  +   +++A  L ++M    +  D  
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVV 606

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  ++G C+ G + EA  + R + +   + +  +Y  LI+G
Sbjct: 607 TYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 200/398 (50%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L     + +  +     FK L   G    I   + L+    KMG V   + V   I 
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           RS    N  T   ++  LC + +I +               D+ TYNTLIN  CR G   
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +   M+ G G      KP   TYN +I+GLCK+G   +AK +F +M    ++PD  
Sbjct: 238 EAFEVMNSMS-GKG-----LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY +++   C  N++ EAK +F +M+ +GV PD+++FS ++    +NG +D+A      M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G+ P+   Y  LI+GYC    +  A ++   M   GC  DVV+YNT++N  CK K +
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            +A +L+ EM+ +G+ P   T+ TL  G  +   + +AL LF  M + ++  D  TYN  
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           IDG CK+  + +A EL+  +   K   N +SY  L++G
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 7/390 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ ML +  SP   +++N L     +N ++     +F  +   G+ PD+ + S LI   
Sbjct: 277 VFNEMLSIGLSPD-TTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVS 335

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G +    +    +  S   P+ V +T LI G C    + EA  +  K     C  DV
Sbjct: 336 SRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV 395

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YNT++NGLC+      A  LF+EM     E GVV  P+  T+ T+I G CKEG + KA
Sbjct: 396 VAYNTILNGLCKKKLLADANALFDEMV----ERGVV--PDFCTFTTLIHGHCKEGNMGKA 449

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF  M  +NI PD+VTY  +I GFC   +  +A  L+ EM+ + + P+ ++++++++ 
Sbjct: 450 LSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C  G + +A RL + MI +G+ P   T NT+I GYC +  +  A +    M S G   D
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD 569

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            ++YNTLIN + K + +++A  L ++M +KG++P VVTYN +  G     +++ A  +  
Sbjct: 570 SITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILR 629

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           +M    +  D  TY   I+G      + EA
Sbjct: 630 KMIERGIDPDRSTYTTLINGYVSQDNLKEA 659



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 208/401 (51%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +++ N L G L K    D    ++  +  +G+  ++YT +I++N  CK  ++      L 
Sbjct: 150 INACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLI 209

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + +     + VT+ +LI   C E  + EA  +         +P +FTYN +INGLC+ G
Sbjct: 210 DMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKG 269

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             + A  +F EM        +   P+T TYNT++   C+     +AK++F  M    ++P
Sbjct: 270 RYVRAKGVFNEM------LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSP 323

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+++++S+I         ++A   F +M   G+ PD V ++++++  C+NG M +A  + 
Sbjct: 324 DLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIR 383

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+ +G   +   YNT+++G C    +  A  LF  M   G + D  ++ TLI+ +CK 
Sbjct: 384 DKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKE 443

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++ +ALSL+  M  K IKP +VTYN L  G  +  ++E+A +L++EM    +  +  +Y
Sbjct: 444 GNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISY 503

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              ++G C  GFV EA  L+  +     +  +V+ N +I G
Sbjct: 504 AILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKG 544



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D     +LI  + +  +++ G      + R  F  +     SL+ GL     +  A  ++
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +      E +V+T N ++N LC+  H I  +  F       G F      + VTYNT+I
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKD-HKIDDVKPFLIDMEQKGIFA-----DIVTYNTLI 227

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +  C+EG + +A E+   M  + + P + TY +VI G C    +  AK +F EM+  G+ 
Sbjct: 228 NAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLS 287

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD  T++ ++ E C+N    +A  +   M+ RGV+P+  ++++LI        +D A   
Sbjct: 288 PDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY 347

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M+++G + D V Y  LIN YC+N  + EAL +  +ML +G    VV YNT+  GL +
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCK 407

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
              +  A  LFDEM    V  D  T+   I G CK G + +AL LF  +     + +IV+
Sbjct: 408 KKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVT 467

Query: 501 YNCLIDG 507
           YN LIDG
Sbjct: 468 YNILIDG 474



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 143/252 (56%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N+++ GL K G+VD A E++ ++    I  +V T   ++   C  +  ++ K   I+M  
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G+  D+VT++ +++  C+ G + +A  ++  M  +G+ P  +TYN +I+G C   +   
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+ +F  M S G   D  +YNTL+   C+N +  EA  ++S+ML +G+ P ++++++L  
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG 333

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
                  +++AL  F +M+ + +  D   Y   I+G C++G + EALE+   + +    L
Sbjct: 334 VSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL 393

Query: 497 NIVSYNCLIDGL 508
           ++V+YN +++GL
Sbjct: 394 DVVAYNTILNGL 405



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 71/149 (47%)

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            ++ LI  Y    K++     F  +   G +  + + N+L+    K   V+ A  +Y+E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              GI+  V T N +   L + H+++       +M +  + AD  TYN  I+  C+ G +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EA E+  ++     +  + +YN +I+GL
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGL 265



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 1/127 (0%)

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
            +SM S  C  D + ++ LI  Y + + + E    +  +  KG   ++   N+L  GL +
Sbjct: 104 LISMSST-CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVK 162

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           +  V+ A ++++E+ R+ +  + YT N  ++ LCK   + +       +       +IV+
Sbjct: 163 MGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVT 222

Query: 501 YNCLIDG 507
           YN LI+ 
Sbjct: 223 YNTLINA 229


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 217/423 (51%), Gaps = 17/423 (4%)

Query: 88  NEALCIFDYMLRMHP-SPPPVSSFNILFGCL-AKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           ++AL + D +  ++P SP  V     L   L A  +  D      + L ++G  PD+  +
Sbjct: 84  DDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADA----RRVLAASG--PDVMVY 137

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + ++  +C  G++     ++  +      P+A T+ +LI+GLC   R   A A+      
Sbjct: 138 NAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C PDV TY  L+   C+      A+ L +EM +        C P+ VTYN +++G+C+
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG------CAPDIVTYNVVLNGICQ 248

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG V+ A E    +      P+ V+Y  V++G   A  W +A++L  EM  +G  P+VVT
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F++++  LC+ G ++ A  +LE M   G  PN+ +YN L+  +C   KI  A +    M 
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S GC  D+VSYNTL+   C+N +V+ A+ L  ++  KG  P +++YNT+  GL +  + +
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL+L DEM    +  D  TY+    GLC+   + EA+  F  ++D         YN ++
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488

Query: 506 DGL 508
            GL
Sbjct: 489 LGL 491



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 6/385 (1%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P  P   ++N L   L         L++ + +   G  PD+ T++IL+   CK       
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +L  +      P+ VT+  ++ G+C E R+ +A         + CEP+  +YN ++ G
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           L        A  L EEMA+        C PN VT+N +I  LC+ G V+ A E+  +M  
Sbjct: 281 LFTAERWEDAEKLMEEMAHKG------CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+ ++Y  ++  FC     ++A      M+ +G  PD+V+++ ++  LC+NG++D 
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  LL  +  +G +P   +YNT+IDG     K   A +L   M S G   D+++Y+T+ +
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+   +EEA+  + ++   GI+PT   YN + LGL +  +   A+ LF  M  +    
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP 514

Query: 462 DTYTYNNFIDGLCKSGFVLEALELF 486
           +  TY   ++GL   G V EA ELF
Sbjct: 515 NESTYTILVEGLAYEGLVKEARELF 539



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD YT++ LI   C  GR S+   VL  + R    P+ VT+T L++  C  S   +A  L
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C PD+ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV+YN +
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPS----YG--CEPNTVSYNIV 277

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           + GL      + A++L  +M  +   P+VVT+  +I   C       A  +  +M   G 
Sbjct: 278 LKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGC 337

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+ ++++ ++   CK  K+ KA   +ELM+ RG  P+  +YNTL+   C   ++D A +
Sbjct: 338 TPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIE 397

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   ++  GC   ++SYNT+I+   K    +EAL L  EM SKG++P ++TY+T+  GL 
Sbjct: 398 LLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC 457

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              ++E A++ F +++   +      YN  + GLCK      A++LF  +  S    N  
Sbjct: 458 REDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNES 517

Query: 500 SYNCLIDGL 508
           +Y  L++GL
Sbjct: 518 TYTILVEGL 526



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 183/365 (50%), Gaps = 7/365 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + + M R     P V ++ IL     K   Y   + L   ++  G  PDI T+++++
Sbjct: 185 ALAVLEDMFR-RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVL 243

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  C+ GRV      L  +      PN V++  ++KGL    R  +A  L  +     C 
Sbjct: 244 NGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCP 303

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V T+N LI+ LCR G    A+ + E+M     ++G  C PN+++YN ++   CK+  +
Sbjct: 304 PNVVTFNMLISFLCRRGLVEPAMEVLEQMP----QYG--CTPNSLSYNPLLHAFCKQKKI 357

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            KA E    M      PD+V+Y +++   C   + + A  L  ++ D+G  P +++++ +
Sbjct: 358 HKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTV 417

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GK  +A  LL+ M  +G+ P+  TY+T+  G C  D+I+ A + F  ++  G 
Sbjct: 418 IDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGI 477

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
                 YN ++   CK ++   A+ L++ M+S G  P   TY  L  GL     V+ A +
Sbjct: 478 RPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARE 537

Query: 450 LFDEM 454
           LF ++
Sbjct: 538 LFAQL 542



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 6/284 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+NI+   L   + ++    L + +   G  P++ T ++LI+  C+ G V     V
Sbjct: 269 PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEV 328

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ +   TPN++++  L+   C + +I +A           C PD+ +YNTL+  LCR
Sbjct: 329 LEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCR 388

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   VA+ L  ++ +        C P  ++YNT+IDGL K G   +A EL  +M  + +
Sbjct: 389 NGEVDVAIELLHQLKDKG------CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGL 442

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD++TY+++  G C  +   EA R F ++ D G++P    ++ I+  LCK  +   A  
Sbjct: 443 QPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAID 502

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           L   MI  G  PN  TY  L++G      +  AR+LF  + S G
Sbjct: 503 LFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 219/441 (49%), Gaps = 53/441 (12%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL ++  M   HP  P   ++  L   L+K       + + + + SA   PD  T ++++
Sbjct: 134 ALGVYRQMNDAHP--PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVV 191

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKHRVF 206
              C   RV     ++  +L      NA+T+++L+ GLC   R+ EA AL       R F
Sbjct: 192 QSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGF 251

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD+ TY+T+I+GLC+ G    A+++FEEM+         C P  +TYN++I G C+ 
Sbjct: 252 T--PDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---------CAPTAITYNSLIGGYCRA 300

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A  L  KM D+N  PDV+TYT+++  FC     ++A  LF +M+   + PDVVTF
Sbjct: 301 GDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 360

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LC  G+M+ A  LLE +  RG  P  YTYN ++DGYC ++++  A +L     S
Sbjct: 361 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS 420

Query: 387 NGCMHDVVSYNTLI-------------------------------------NWYCKNKDV 409
            G + + V+YN L+                                     +  C++   
Sbjct: 421 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 480

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A+  Y EM+ +G  P   T+ T+   L + HQ ++A +L +EM +        T +  
Sbjct: 481 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 540

Query: 470 IDGLCKSGFVLEALELFRAIR 490
           +   C++G + +A EL   +R
Sbjct: 541 VSAYCRAGMIQKADELASELR 561



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 201/406 (49%), Gaps = 13/406 (3%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP PV   N +   L   +   T ++LF ++   G   +  T+  LI+  CK   +    
Sbjct: 43  SPDPVE-LNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAM 100

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  +      P  +    +I GLC   R+  A  ++ +    A  PD  TY  L++GL
Sbjct: 101 GLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGL 159

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            + G    A+ + +EM +          P+  T   ++  LC    VD A+EL  +M   
Sbjct: 160 SKAGRLRDAVQVLQEMVSARH------VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 213

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFI-EMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            +  + +TY++++ G C     +EA  L + E+  +G  PD+VT+S ++D LCK G++  
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  + E M      P   TYN+LI GYC    +D A +L   M  + C  DV++Y TL++
Sbjct: 274 AVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMS 330

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +CK   +++A  L+ +M++  + P VVT+ +L  GL    ++E AL+L +E+ R     
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             YTYN  +DG CKS  V +A EL    R   +  N V+YN L+ G
Sbjct: 391 TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAG 436



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 187/375 (49%), Gaps = 13/375 (3%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSH-GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
           AG   D  T ++++       ++ H G ++L  I     +P+ V   +++  LC      
Sbjct: 4   AGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTT 63

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
            A ALF K            YN LI+ LC+      A+ L  +M +          P T+
Sbjct: 64  TAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRG------MNPGTL 116

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            +N +I GLC+ G +  A  ++ +M D +  PD +TYT ++ G   A    +A ++  EM
Sbjct: 117 LHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEM 175

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +     PD  T +V++  LC   ++D A  L+E M+ RG+  N  TY+ L+DG C  +++
Sbjct: 176 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 235

Query: 375 DHARKLFVS-MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           D A  L +  +   G   D+V+Y+T+I+  CK   + +A+ ++ EM      PT +TYN+
Sbjct: 236 DEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNS 292

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G      ++ A++L  +M  ++ A D  TY   +   CK G + +A ELF+ +  +K
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352

Query: 494 YELNIVSYNCLIDGL 508
              ++V++  L+DGL
Sbjct: 353 LSPDVVTFTSLVDGL 367



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 3/182 (1%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDK-ASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           M+D G   D  TF+V++  L  + K+      LL+ +  RG++P+    NT++   C   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
               A  LF  M   G ++    YN LI+  CK + ++EA+ L  +M S+G+ P  + +N
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +  GL    ++  AL ++ +M   H   D  TY   + GL K+G + +A+++ + +  +
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 493 KY 494
           ++
Sbjct: 179 RH 180



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/105 (19%), Positives = 45/105 (42%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P P  V+ + I+   L ++   D  +  ++ +   G  P   T + ++   CK  +    
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
             +L  +++   TP   T  +++   C    I +A  L ++ R++
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 220/407 (54%), Gaps = 10/407 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN++   + K    D  + +F+ +      PD++T+  L++  CK  R+    ++
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L  + +  CF P++VTF  LI GLC +  ++    L     +  C P+  TYNT+INGLC
Sbjct: 246 LDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A++L + M          C PN VTY T+I+GL K+G       L   +++  
Sbjct: 305 LKGKLDKAVSLLDRMVASK------CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            + +   Y+++I G        EA  L+ +M+++G QP++V +S ++D LC+ GK+D+A 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M+ +G  PN +TY++LI G+  T     A +++  M  N C+ + + Y+ LI+  
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAA 461
           C++  + EA+ +++ ML +G++P VV Y+++  GL     VE  LKLF+EM  + +    
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TYN  +  LCK   +  A++L  ++ D     ++++ N  ++ L
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 211/443 (47%), Gaps = 59/443 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+ +F  M  +    P V ++  L   L K    D  + L   +   G FP   T ++
Sbjct: 205 DRAIEVFREMA-IQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 263

Query: 148 LINCFCKMG---RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           LIN  CK G   RV+   +V    L+ C  PN VT+ ++I GLC + ++ +A +L  +  
Sbjct: 264 LINGLCKKGDMVRVTK--LVDNMFLKGC-VPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 320

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLF---EEMANGNGEFGVV------------- 248
              C P+  TY TLINGL + G ++  ++L    EE  +   E+                
Sbjct: 321 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 380

Query: 249 -------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                        C+PN V Y+ +IDGLC+EG +D+AKE+  +M ++   P+  TY+S+I
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           +GF    +  +A R++ EM      P+ + +SV++  LC++GK+ +A  +   M+ RG+ 
Sbjct: 441 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 500

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           P+   Y+++I G C    ++   KLF  M  + +    DVV+YN L+   CK   +  A+
Sbjct: 501 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 560

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFE------------------IHQVER---ALKLFD 452
            L + ML +G  P ++T N     L E                  +H+ +R   A K+ +
Sbjct: 561 DLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIE 620

Query: 453 EMRRNHVAADTYTYNNFIDGLCK 475
            M +  +  +  T+   I  LCK
Sbjct: 621 VMLQKFLPPNASTWERIIPELCK 643



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 181/335 (54%), Gaps = 6/335 (1%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           +PN ++F  +IK +C    +  A  +F +  +  CEPDVFTY TL++GLC+      A+ 
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L +EM          C P++VT+N +I+GLCK+G + +  +L   M  +   P+ VTY +
Sbjct: 245 LLDEMQIEG------CFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G C     ++A  L   M+     P+ VT+  +++ L K G+      LL  +  RG
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            + N Y Y+TLI G    +K + A  L+  M   GC  ++V Y+ LI+  C+   ++EA 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +  EM++KG  P   TY++L  G F+    ++A++++ EM +N+   +   Y+  I GL
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C+ G + EA+ ++  +       ++V+Y+ +I GL
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 160/302 (52%), Gaps = 4/302 (1%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F C   V ++N+++N + + G    AL  +E    G         PN +++N +I  +CK
Sbjct: 145 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS----PNVLSFNLVIKAMCK 200

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G VD+A E+F +M  +   PDV TY +++ G C  +  +EA  L  EM  +G  P  VT
Sbjct: 201 LGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT 260

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+V+++ LCK G M + ++L++ M  +G  PN  TYNT+I+G CL  K+D A  L   M 
Sbjct: 261 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 320

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++ C+ + V+Y TLIN   K     + + L S +  +G       Y+TL  GLF+  + E
Sbjct: 321 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 380

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ L+ +M       +   Y+  IDGLC+ G + EA E+   + +     N  +Y+ LI
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440

Query: 506 DG 507
            G
Sbjct: 441 KG 442



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 147/280 (52%), Gaps = 7/280 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL--KMKDENINPDV 288
           A+ LF  M +   EF   C+    ++N++++ + +EG   +A E +        NI+P+V
Sbjct: 134 AIELFGRMVD---EFQ--CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 188

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +++  VI+  C     + A  +F EM  Q  +PDV T+  +MD LCK  ++D+A  LL+ 
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 248

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G  P++ T+N LI+G C    +    KL  +M   GC+ + V+YNT+IN  C    
Sbjct: 249 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 308

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++A+SL   M++    P  VTY TL  GL +  +    + L   +      A+ Y Y+ 
Sbjct: 309 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 368

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I GL K     EA+ L++ + +   + NIV Y+ LIDGL
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 65/346 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + D M+     P  V+   ++ G + + +  D V  L   L   G   + Y +S 
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV-HLLSSLEERGHHANEYAYST 368

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K  +      +  +++     PN V +++LI GLC E ++ EA  +  +     
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+ FTY++LI G  +TG++  A+ +++EMA  N      C PN + Y+ +I GLC++G
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN------CVPNEICYSVLIHGLCEDG 482

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ--GVQPDVVT 325
            + +A  ++  M    + PDVV Y+S+I G C A       +LF EM+ Q    QPDVVT
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542

Query: 326 FSVIMDELCK-----------NGKMDK--------------------------------- 341
           +++++  LCK           N  +D+                                 
Sbjct: 543 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDEL 602

Query: 342 ------------ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                       A++++E+M+ + + PN  T+  +I   C   K+ 
Sbjct: 603 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 218/418 (52%), Gaps = 9/418 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I + ML+   +P   S FNIL    A+ +  D  ++ F+ +      PD++T  IL++C 
Sbjct: 141 IHEEMLKAGIAPNTFS-FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 153 CKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           CK G     F V   ++   F P +    T++++ L    R+ EA  +F +       PD
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
              YNT+I+GL + GH   AL + + M          C P  VTY  +++ LCK G +++
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNM------LAKACVPTEVTYGILVNSLCKAGTLER 313

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A+ELF  M      P+ V YTS+I GF  +    EA  LF EM++ G +PDV+T +V++D
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK+G  ++A++  E M+  G  PN  TY T+I G     ++ +A ++   M ++GC  
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL-KL 450
           D V+Y  L++ +CK   ++EA  L  E+      P +  Y++L  GL +   VE+ L  L
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL 493

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F++ +      D     + I GLCK+G + EA  +F+ +     + +  +YN LI+GL
Sbjct: 494 FEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/408 (33%), Positives = 200/408 (49%), Gaps = 9/408 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   ++N +   LAK  H    L +   + +    P   T+ IL+N  CK G +     
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +  S F PN+V +TSLI G     R+ EA +LF +       PDV T+  +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           ++G+   A   FEEM  G       CKPN VTY TII GL K G V  A  +   M    
Sbjct: 377 KSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA- 342
             PD VTY  ++ GFC     +EA +L  E+      P++  +S +++ LC  G ++K  
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L E         +     ++I G C T ++D A ++F  M S GC  D  +YN LIN 
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 403 YCKNKD--VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
            C++++  VE A +L  ++   G  P  VTY  L +GL +I +V+RA+K+ +E       
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           AD   Y     GLC  G V  A+ LF+ +       +  +Y C+I+GL
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 198/422 (46%), Gaps = 46/422 (10%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F+ M+R    P  V+   I+ G L+K         + K + + G FPD  T+  L++ FC
Sbjct: 388 FEEMMRGGCKPNVVTYTTIIQG-LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC-------------------AES--- 191
           K+GR+     +L  + +   +PN   ++SL+ GLC                   AE+   
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDP 506

Query: 192 --------------RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV--ALNLF 235
                         R+ EA  +F +     C+PD  TYN LINGLCR+    V  A  L 
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALL 566

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            ++        V   P+ VTY  +  GLCK G VD+A ++  +      N DVV YT++ 
Sbjct: 567 HDLEK------VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G CY    + A  LF EM+ QG  PD   +  I++ L K  K++ A +  + MI +G  
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQK 680

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVVSYNTLINWYCKNKDVEEALS 414
           P   TY  L+   C    +D A   F SM + G  +  V+ Y+ LI+ +CK   V+ AL 
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALK 740

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ +M+S+G  PT VT  +LF GL    + E+A +L  EM          T+   +DGL 
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800

Query: 475 KS 476
           KS
Sbjct: 801 KS 802



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 216/464 (46%), Gaps = 54/464 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +FD M+     P  V +  ++   L K+ +++     F+ +   G  P++ T++ 
Sbjct: 347 KEACSLFDEMVEAGYRPD-VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405

Query: 148 LINCFCKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +I    K+GRV++ F ++ G I   CF P++VT+  L+ G C   R+ EAA L  +    
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---GVVCKPNTVTYNTIIDGL 263
           +  P++  Y++L+NGLC  G     L+   E +    E    G+ C        +II GL
Sbjct: 465 SSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC--------SIIVGL 516

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD---QGVQ 320
           CK G +D+A  +F +M  E   PD  TY  +I G C + + N  +R F  + D    G  
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEKVGYL 575

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD VT++ +   LCK G++D+A ++LE    RG N +   Y  L  G C   ++D A  L
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL-- 438
           F  M   G   D  +Y  +IN   K K +E+A   + EM+ KG KPTV TY  L   L  
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695

Query: 439 ----------FE------------------IH------QVERALKLFDEMRRNHVAADTY 464
                     FE                  IH      +V+ ALKLF++M          
Sbjct: 696 AGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T  +  DGL +SG   +A EL + +       +  ++  ++DGL
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 190/385 (49%), Gaps = 6/385 (1%)

Query: 125 TVLSLFKRLN-SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           T +S F+     AG   D++T++ L+N        S  + +   +L++   PN  +F  L
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I+      R  +A   F   +   C+PD+ T+  L++ LC+ G    A  +F EM     
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM---- 216

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
             G V  P+   +  ++  L K   V +A+E+F +M+     PD + Y ++I G   A  
Sbjct: 217 AMGFV-PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA ++   M+ +   P  VT+ ++++ LCK G +++A  L  +M   G  PN+  Y +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G+  + ++  A  LF  M   G   DV+++  +I+  CK+ + E+A   + EM+  G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            KP VVTY T+  GL +I +V  A ++   M  +    D+ TY   +DG CK G + EA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +L   +       N+  Y+ L++GL
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGL 480



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 10/296 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +EA  IF  M+      P  +++NIL    C ++    +   +L   L   G  PD  T+
Sbjct: 523 DEACRIFQRMVS-EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + L    CK+G V     +L       +  + V +T+L  GLC + ++  A +LF +   
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PD   Y  +INGL +      A   F+EM  G G+     KP   TY  ++  LC 
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMI-GKGQ-----KPTVATYTALVQALCH 695

Query: 266 EGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            G VD+A   F  M     +   V+ Y ++I GFC A   + A +LF +M+ +G  P  V
Sbjct: 696 AGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           T + + D L ++GK +KA  LL+ M   G  P+  T+  ++DG   +D+     KL
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 206/412 (50%), Gaps = 14/412 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP  S+FN L   LA+      +  LF  +  A + P++ T+ IL+   CK GRV     
Sbjct: 134 PPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193

Query: 164 VLGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR---VFACEPDVFTYNTL 218
           VL  +    S   P+ V   +++ GLC   R+ +A   F + R   V  C P+  TYN L
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVK-FVEERMRSVHGCAPNTVTYNCL 252

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
            +  CR G+  +A  L  +M            PN VT NTI+ GLC  G V  A E F +
Sbjct: 253 AHAFCRAGNVGMACELVAKMEKER------VTPNAVTLNTIVGGLCWVGRVGAALEFFRE 306

Query: 279 MKD--ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +        + VTY++++  F + N+   A  LF EM+D+G  PD + +  ++  L + 
Sbjct: 307 KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQA 366

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++D A  +   M   G   +   YN LI G+C   +++ A +L   M+  G   DV +Y
Sbjct: 367 GRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTY 426

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           NTL++  CK  D      L  +M+  G +P+VVT+ TL  G  ++ Q++ AL++F  M  
Sbjct: 427 NTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDE 486

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  +T  YN  ID LCKS     A+ELF  +R+     N+ ++N L+ GL
Sbjct: 487 SGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGL 538



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 184/417 (44%), Gaps = 43/417 (10%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTV 126
            +K  CK+   GD        AL + D M        P  V   NI+ G     +    V
Sbjct: 178 LVKGLCKAGRVGD--------ALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAV 229

Query: 127 LSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
             + +R+ S  G  P+  T++ L + FC+ G V     ++ ++ +   TPNAVT  +++ 
Sbjct: 230 KFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVG 289

Query: 186 GLCAESRIMEAAALFTKHRVFACEP--DVFTYNTLINGLCRTGHTIVALNLFEEMAN-GN 242
           GLC   R+  A   F + R    E   +  TY+TL+     T +  VA+ LF EM + GN
Sbjct: 290 GLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGN 349

Query: 243 GEFGVVC----------------------------KPNTVTYNTIIDGLCKEGFVDKAKE 274
               ++                             + +   YN +I G C+   +++A E
Sbjct: 350 SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYE 409

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L  +MK+  + PDV TY +++ G C A D+     L  +M+D G +P VVTF  ++   C
Sbjct: 410 LLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYC 469

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G++D+A R+   M   G+ PNT  YNTLID  C +     A +LF  M       +V 
Sbjct: 470 KVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVT 529

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           ++N L+         E+A  L   M      P  VT + L   L  I + +R LK F
Sbjct: 530 TFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR-LKHF 585



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +F  M+    SP  +  F ++ G L +    D   S+   +  AG   D   ++ILI
Sbjct: 337 AMELFHEMVDEGNSPDAIMYFTMISG-LTQAGRLDDAWSMATSMKKAGFQLDAKAYNILI 395

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             FC+  R++  + +LG +  +   P+  T+ +L+ GLC     +    L  K     C 
Sbjct: 396 GGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCR 455

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V T+ TLI+G C+ G    AL +F  M     E G+  +PNTV YNT+ID LCK    
Sbjct: 456 PSVVTFGTLIHGYCKVGQIDEALRIFRSM----DESGI--QPNTVIYNTLIDFLCKSRDT 509

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A ELF +M+++++  +V T+ ++++G    N   +A  L   M +    PD VT  ++
Sbjct: 510 SLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDIL 569

Query: 330 MDELCKNGKMDKASRLLE 347
           M+ L   G+ D+    ++
Sbjct: 570 MEWLPVIGETDRLKHFMQ 587



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D AR L  S+ +     D  ++NTL++   +  D+     L++ M    ++P VVTY  L
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 435 FLGLFEIHQVERALKLFDEMR--RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             GL +  +V  AL + D M    + V  D    NN +DGLCK+G + +A++       S
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 493 KY--ELNIVSYNCL 504
            +    N V+YNCL
Sbjct: 239 VHGCAPNTVTYNCL 252


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 206/384 (53%), Gaps = 8/384 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFV 163
           + SFN     +A++     V SLF R+  AG   + PD+ T+SILI C C+ GR+  GF 
Sbjct: 58  IYSFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFA 116

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGL 222
            LG +++  F   A+TF  L+KGLCA+ R  +A  +  +     +C PDVF+   L+ GL
Sbjct: 117 ALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 176

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C    +  AL L   MA+  G       P+ V+Y T+I+G  KEG  DKA   + +M D 
Sbjct: 177 CDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 233

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I+P+VVTY+S+I   C A   ++A  +   M+  GV PD +T++ I+   C +G+  +A
Sbjct: 234 RISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 293

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
              L+ M   GV PN  TY +L++  C   +   ARK+F SM   G   D+ +Y TL+  
Sbjct: 294 IGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQG 353

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           Y     + E  +L   M+  GI+P    +N L     +  +V++A+ +F +MR++ +  +
Sbjct: 354 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 413

Query: 463 TYTYNNFIDGLCKSGFVLEALELF 486
              Y   ID LCKSG V +A+  F
Sbjct: 414 VVCYGTVIDVLCKSGSVDDAMLYF 437



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 144/300 (48%), Gaps = 8/300 (2%)

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           ++++N  +  + R      A++LF  MA    +      P+  TY+ +I   C+ G +D 
Sbjct: 58  IYSFNRTLTDVARD-SPAAAVSLFNRMARAGAD---EVTPDLCTYSILIGCCCRAGRLDL 113

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIM 330
                  +  +    + +T+  +++G C     ++A  + +  M +    PDV + ++++
Sbjct: 114 GFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILL 173

Query: 331 DELCKNGKMDKASRLLELMI---WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             LC   +  +A  LL +M      G  P+  +Y T+I+G+      D A   +  M   
Sbjct: 174 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 233

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +VV+Y+++I   CK + +++A+ + + M+  G+ P  +TYN++  G     Q + A
Sbjct: 234 RISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 293

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +    +MR + V  +  TY + ++ LCK+G   EA ++F ++     E +I +Y  L+ G
Sbjct: 294 IGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQG 353


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/417 (33%), Positives = 208/417 (49%), Gaps = 11/417 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D ML M  +   V++FN +   L    H      L  R+   G  P + T+  L
Sbjct: 233 EAATLLDEMLLMGCAAD-VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFL 291

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +   C+  +    + +LGR+       N V   ++I+G  AE ++  A  L+       C
Sbjct: 292 LRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGC 347

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TYN L++GLC+ G    A+ + +EM     E G  C PN VTY+T++   C+ G 
Sbjct: 348 PPDVHTYNILMHGLCKLGRCGSAVRMLDEME----EKG--CAPNIVTYSTLLHSFCRNGM 401

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            D A+ +  +M  +  + +   Y  +I         +EA RL  EM  QG +PD+ T++ 
Sbjct: 402 WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNT 461

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  LC N +MD+A  +   ++  GV  N  TYNTLI     + +     +L   M  +G
Sbjct: 462 IIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  DVVSYN LI   CK  +V+ ++ L  EM++KGIKP   +YN L   L +  +V  AL
Sbjct: 522 CPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDAL 581

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +L  EM    +  D  TYN  I+GLCK G+   AL L   + +     +IV+YN LI
Sbjct: 582 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 206/446 (46%), Gaps = 25/446 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             AL + D M R     P   S+N +   LA+   +   L L++R+    + P  +T  +
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 185

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
                C++GR      +L  + R    P+AV + ++I  L A+  + EAA L  +  +  
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMA-------------------------NGN 242
           C  DV T+N ++ GLC  GH   A  L + M                             
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
              G V + N V  NT+I G   EG + +A EL+  M  +   PDV TY  ++ G C   
Sbjct: 306 AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
               A R+  EM ++G  P++VT+S ++   C+NG  D A  +L+ M  +G + N+  YN
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            +I       K+D A +L   M+S GC  D+ +YNT+I   C N  ++EA  ++  +L +
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G+    +TYNTL   L    + +  L+L +EM  +    D  +YN  I  LCK G V  +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           + L   +     + N  SYN LI+ L
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINEL 571



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 187/365 (51%), Gaps = 7/365 (1%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++ GCLA+ K       L++ + S G  PD++T++IL++  CK+GR      +L  +   
Sbjct: 322 VIRGCLAEGK-LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK 380

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              PN VT+++L+   C      +A A+  +        +   YN +I  L + G    A
Sbjct: 381 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEA 440

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           + L +EM +        CKP+  TYNTII  LC    +D+A+ +F  + +E +  + +TY
Sbjct: 441 MRLVQEMKSQG------CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITY 494

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I    ++  W E  RL  EM+  G   DVV+++ ++  LCK G +D++  LLE M+ 
Sbjct: 495 NTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +G+ PN ++YN LI+  C   K+  A +L   M + G   D+V+YNTLIN  CK      
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 614

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           AL+L  ++ ++ + P +VTYN L     ++  ++ A  L D+     +  +  T+   + 
Sbjct: 615 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674

Query: 472 GLCKS 476
              + 
Sbjct: 675 NFVRQ 679


>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
          Length = 458

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 208/397 (52%), Gaps = 8/397 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFV 163
           + SFN     +A++     V SLF R+  AG   + PD+ T+SILI C C+ GR+  GF 
Sbjct: 58  IYSFNRTLTDVARDSPAAAV-SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFA 116

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGL 222
            LG +++  F   A+TF  L+KGLCA+ R  +A  +  +     +C PDVF+   L+ GL
Sbjct: 117 ALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGL 176

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C    +  AL L   MA+  G       P+ V+Y T+I+G  KEG  DKA   + +M   
Sbjct: 177 CDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGR 233

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I+P+VVTY+S+I   C A   ++A  +   M+  GV PD +T+S I+   C +G+  + 
Sbjct: 234 RISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKED 293

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
              L  M   GV PN  TY +L++  C   +   ARK+F SM   G   D+ +Y TL+  
Sbjct: 294 IGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQG 353

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           Y     + E  +L   M+  GI+P    +N L     +  +V++A+ +F +MR++ +  +
Sbjct: 354 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 413

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              Y   ID LCKSG V +A+  F  + D     NI+
Sbjct: 414 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 8/272 (2%)

Query: 88  NEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
            EAL +   M   R   SPP V S+  +     K    D   S +  +    + P++ T+
Sbjct: 183 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTY 242

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           S +I   CK   +     VL  ++++   P+ +T++S++ G C+  +  E      K R 
Sbjct: 243 SSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRS 302

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              EP+V TY +L+N LC+ G    A  +F+ M     E      P+  TY T++ G   
Sbjct: 303 DGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLE------PDIATYRTLLQGYAT 356

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G + +   L   M    I PD   +  +I  +      ++A  +F +M   G+ P+VV 
Sbjct: 357 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 416

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +  ++D LCK+G +D A    E MI  G+ PN
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 448



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 144/300 (48%), Gaps = 8/300 (2%)

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           ++++N  +  + R      A++LF  MA    +      P+  TY+ +I   C+ G +D 
Sbjct: 58  IYSFNRTLTDVARD-SPAAAVSLFNRMARAGAD---EVTPDLCTYSILIGCCCRAGRLDL 113

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIM 330
                  +  +    + +T+  +++G C     ++A  + +  M +    PDV + ++++
Sbjct: 114 GFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILL 173

Query: 331 DELCKNGKMDKASRLLELMI---WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             LC   +  +A  LL +M      G  P+  +Y T+I+G+      D A   +  M   
Sbjct: 174 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGR 233

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +VV+Y+++I   CK + +++A+ + + M+  G+ P  +TY+++  G     Q +  
Sbjct: 234 RISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKED 293

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +   ++MR + V  +  TY + ++ LCK+G   +A ++F ++     E +I +Y  L+ G
Sbjct: 294 IGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQG 353



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 29/220 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L K +  D  + +   +   G+ PD  T+S +++ +C  G+       
Sbjct: 237 PNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGT 296

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      PN VT+ SL+  LC   R  +A  +F        EPD+ TY TL+ G   
Sbjct: 297 LNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYAT 356

Query: 225 TG-----HTIVALNLFEEMANGNGEFGV-VCK-----------------------PNTVT 255
            G     H ++ L +   +   +  F + +C                        PN V 
Sbjct: 357 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 416

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           Y T+ID LCK G VD A   F +M DE + P+++   S +
Sbjct: 417 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIILSVSSV 456


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/401 (33%), Positives = 214/401 (53%), Gaps = 9/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           ++S N L   L K      +  ++K +    + P++ T +I IN  CK G+++    V+ 
Sbjct: 165 LNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIE 224

Query: 167 RILRSCFTPNAVTFTSLIKGLC---AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            I    F+PN VT+ +LI G C   +  ++  A A+  +       P+  T+NTLI+G C
Sbjct: 225 DIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFC 284

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +  + + A N FEEM           KPN VTYN++I+GL   G +D+A  L+ KM    
Sbjct: 285 KDENVLAAKNAFEEMQRQG------LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P++VT+ ++I GFC      EA++LF ++ +Q + P+ +TF+ ++D  CK G M++  
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L   M+  G+ PN  TYN LI G C    +  A+KL   ME+     DVV+YN LI  +
Sbjct: 399 ALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGW 458

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK+ +  +A  L  EML+ G+KP  VTYNTL  G      ++ ALK+  +M +    A+ 
Sbjct: 459 CKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANV 518

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
            TYN  I G CK+G + +A  L   + +     N  +Y+ +
Sbjct: 519 VTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 190/368 (51%), Gaps = 32/368 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
           P +++FNI    L K    +    + + + + G  P+I T++ LI+  CK G     +  
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 163 -VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +L  +L +   PN +TF +LI G C +  ++ A   F + +    +P++ TYN+LING
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVV---------CK--------------------PN 252
           L   G    A+ L+++M     +  +V         CK                    PN
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            +T+NT+ID  CK G +++   L   M DE I P+V TY  +I G C   +   AK+L  
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLN 437

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM +  ++ DVVT+++++   CK+G+  KA +LL  M+  GV PN  TYNTL+DGYC+  
Sbjct: 438 EMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG 497

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A K+   ME  G   +VV+YN LI  +CK   +E+A  L +EML KG+ P   TY+
Sbjct: 498 NLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557

Query: 433 TLFLGLFE 440
            + L + E
Sbjct: 558 VVRLEMLE 565



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 206/396 (52%), Gaps = 12/396 (3%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFP--DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           L KN+ + TV S+F  L   G  P  +     +L+  +     +     V  R+    F 
Sbjct: 104 LVKNEKH-TVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFK 162

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
            +  +   L+  L   +   E   ++ +      +P++ T+N  INGLC+ G    A ++
Sbjct: 163 LSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDV 222

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK---AKELFLKMKDENINPDVVTY 291
            E++      +G    PN VTYNT+IDG CK+G   K   A  +  +M    I P+ +T+
Sbjct: 223 IEDIK----AWGF--SPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITF 276

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I GFC   +   AK  F EM  QG++P++VT++ +++ L  NGK+D+A  L + M+ 
Sbjct: 277 NTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVG 336

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G+ PN  T+N LI+G+C    I  ARKLF  +     + + +++NT+I+ +CK   +EE
Sbjct: 337 LGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEE 396

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             +L++ ML +GI P V TYN L  GL     V  A KL +EM    + AD  TYN  I 
Sbjct: 397 GFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIG 456

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G CK G   +A +L   + +   + N V+YN L+DG
Sbjct: 457 GWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDG 492



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 198/384 (51%), Gaps = 11/384 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
            +F+R+   G    + + + L++   K         V   +++    PN  TF   I GL
Sbjct: 151 EVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGL 210

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR---TGHTIVALNLFEEM-ANGNG 243
           C   ++ +A  +    + +   P++ TYNTLI+G C+    G    A  + +EM AN   
Sbjct: 211 CKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK-- 268

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
               +C PN +T+NT+IDG CK+  V  AK  F +M+ + + P++VTY S+I G      
Sbjct: 269 ----IC-PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            +EA  L+ +M+  G++P++VTF+ +++  CK   + +A +L + +  + + PN  T+NT
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +ID +C    ++    L  SM   G   +V +YN LI   C+N++V  A  L +EM +  
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           +K  VVTYN L  G  +  +  +A KL  EM    V  +  TYN  +DG C  G +  AL
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 484 ELFRAIRDSKYELNIVSYNCLIDG 507
           ++   +       N+V+YN LI G
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKG 527



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 142/255 (55%), Gaps = 3/255 (1%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N ++  L K     + + ++ +M    I P++ T+   I G C A   N+A+ +  ++  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 317 QGVQPDVVTFSVIMDELCKNG---KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            G  P++VT++ ++D  CK G   KM +A  +L+ M+   + PN  T+NTLIDG+C  + 
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A+  F  M+  G   ++V+YN+LIN    N  ++EA++L+ +M+  G+KP +VT+N 
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +   ++ A KLFD++    +  +  T+N  ID  CK+G + E   L  ++ D  
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408

Query: 494 YELNIVSYNCLIDGL 508
              N+ +YNCLI GL
Sbjct: 409 IFPNVSTYNCLIAGL 423



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 6/183 (3%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNP--NTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +D+L KN K   +S    L++  G  P  N    + L+  Y    +I  A ++F  ++  
Sbjct: 101 LDKLVKNEKHTVSSVFHSLLLG-GDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDY 159

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    + S N L++   K  +  E   +Y EM+ + I+P + T+N    GL +  ++ +A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCK---SGFVLEALELFRAIRDSKYELNIVSYNCL 504
             + ++++    + +  TYN  IDG CK   +G +  A  + + +  +K   N +++N L
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTL 279

Query: 505 IDG 507
           IDG
Sbjct: 280 IDG 282


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 213/428 (49%), Gaps = 8/428 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           I+L    EA+  F  M R    P    S N L    AK    D V   FK +  AG  P 
Sbjct: 71  IDLGMLEEAIQCFSKMKRFRVFPK-TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 129

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           ++T++I+I+C CK G V     +   +      P+ VT+ S+I G     R+ +    F 
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           + +   CEPDV TYN LIN  C+ G   + L  + EM  GNG      KPN V+Y+T++D
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVD 243

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
             CKEG + +A + ++ M+   + P+  TYTS+I   C   + ++A RL  EM+  GV+ 
Sbjct: 244 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 303

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT++ ++D LC   +M +A  L   M   GV PN  +YN LI G+     +D A +L 
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ++  G   D++ Y T I   C  + +E A  + +EM   GIK   + Y TL    F+ 
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 423

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVS 500
                 L L DEM+   +     T+   IDGLCK+  V +A++ F  I  D   + N   
Sbjct: 424 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 483

Query: 501 YNCLIDGL 508
           +  +IDGL
Sbjct: 484 FTAMIDGL 491



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    F+ LF  L      +  +  F ++    +FP   + + L++ F K+G+       
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   P   T+  +I  +C E  +  A  LF + +     PD  TYN++I+G  +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     +  FEEM +      + C+P+ +TYN +I+  CK G +    E + +MK   +
Sbjct: 178 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 231

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y++++  FC      +A + +++M   G+ P+  T++ ++D  CK G +  A R
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 291

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+  GV  N  TY  LIDG C  +++  A +LF  M++ G + ++ SYN LI+ + 
Sbjct: 292 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 351

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K+++ AL L +E+  +GIKP ++ Y T   GL  + ++E A  + +EM+   + A++ 
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   +D   KSG   E L L   +++   E+ +V++  LIDGL
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 7/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ L     K       +  +  +   GL P+ YT++ LI+  CK+G +S  F +
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+     N VT+T+LI GLC   R+ EA  LF K       P++ +YN LI+G  +
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   AL L  E+  G G      KP+ + Y T I GLC    ++ AK +  +MK+  I
Sbjct: 353 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + + YT+++  +  + +  E   L  EM +  ++  VVTF V++D LCKN  + KA  
Sbjct: 407 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 466

Query: 345 LLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
               +    G+  N   +  +IDG C  ++++ A  LF  M   G + D  +Y +L++  
Sbjct: 467 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 526

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +V EAL+L  +M   G+K  ++ Y +L  GL   +Q+++A    +EM    +  D 
Sbjct: 527 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 586

Query: 464 YTYNNFIDGLCKSGFVLEALEL 485
               + +    + G + EA+EL
Sbjct: 587 VLCISVLKKHYELGCIDEAVEL 608



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 142/261 (54%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC P    ++ +   L   G +++A + F KMK   + P   +   ++  F      ++ 
Sbjct: 55  VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           KR F +M+  G +P V T+++++D +CK G ++ A  L E M +RG+ P+T TYN++IDG
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +    ++D     F  M+   C  DV++YN LIN +CK   +   L  Y EM   G+KP 
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VV+Y+TL     +   +++A+K + +MRR  +  + YTY + ID  CK G + +A  L  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +     E N+V+Y  LIDGL
Sbjct: 295 EMLQVGVEWNVVTYTALIDGL 315


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/408 (34%), Positives = 215/408 (52%), Gaps = 19/408 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S N     L +       L+LF+   +    P+ +T+ ILI  F   G +     +L 
Sbjct: 22  VFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLE 81

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA--CEPDVFTYNTLINGLCR 224
            +  S F  NAV  T+L+KGLC   R++EA   F   R  A  C PDV TY  L++ LC+
Sbjct: 82  EMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF---RAMAKDCAPDVMTYTALVHALCK 138

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G    A  +  EM A G       C P+TVT++T+IDGLCK G  ++A  +   +    
Sbjct: 139 AGKFDEAQGMLREMVAQG-------CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191

Query: 284 INPDVVTYTSVIRGFCYANDWNE---AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +      + ++I+  C  N +N    A ++   ++ +G  P V+ F+++++  CK   +D
Sbjct: 192 MGNSDAAFETIIQRLC--NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 249

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A +LLE+MI +G  PN +T+  LI G C  +++  A++L   M   GC  +VV+Y+T+I
Sbjct: 250 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVI 309

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N  CK   V++A  L+  M  +   P VVT+N L  GL +  ++E A +L+  MR    A
Sbjct: 310 NGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 369

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE-LNIVSYNCLIDG 507
            D  TYN+ IDGLCKS  V EA +LF+ I +S     N V+Y+ L  G
Sbjct: 370 PDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 211/444 (47%), Gaps = 46/444 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
           P V ++  L   L K   +D    + + + + G  PD  T S LI+  CK G     F  
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 163 ----------------------------------VVLGRILRSCFTPNAVTFTSLIKGLC 188
                                              VLG ++   FTP  + F  +I G C
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               +  A  L        C P+VFT+  LI GLC+      A  L E+M  G       
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG------ 297

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C PN VTY+T+I+GLCK+G VD A ELF  M+  N  P+VVT+  +I G C A    EA+
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP-NTYTYNTLIDG 367
           +L+  M + G  PD++T++ ++D LCK+ ++D+A +L + +   GV+  N  TY+TL  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y    ++  A ++F  +   G   D+ +Y +LI  YCK     E + L  EM SKG  P 
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V T + +  GLFE +  ERA++LFD M       D   YN  ++G+ ++    +AL +  
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537

Query: 488 AI---RDSKYELNIVSYNCLIDGL 508
            +   RD K+  +  + + L++ L
Sbjct: 538 QVIDKRDRKFNPSSSAVDALVESL 561



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 181/358 (50%), Gaps = 43/358 (12%)

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC  +R  EA ALF       C P+ FTY  LI G    G   +A+ L EEM +   E  
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFE-- 89

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                N V + T++ GLC  G V +A E F  M  ++  PDV+TYT+++   C A  ++E
Sbjct: 90  ----GNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDE 144

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN----------- 355
           A+ +  EM+ QG  PD VTFS ++D LCK G  ++A R+LE +I RG+            
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 356 -------------------------PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
                                    P    +N +I+G+C    +D A KL   M   GC+
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V ++  LI   CK   V EA  L  +M+  G  P VVTY+T+  GL +  QV+ A +L
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F  M R +   +  T+N  IDGLCK+  + EA +L+  +R++    +I++YN LIDGL
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 382



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 196/438 (44%), Gaps = 43/438 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F IL   L K         L +++   G  P++ T+S +IN  CK G+V   + +
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    PN VT   LI GLC   RI EA  L+ + R   C PD+ TYN+LI+GLC+
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     A  LF+ +         V   N VTY+T+  G    G +  A  +F  + D+  
Sbjct: 385 SFQVDEAFQLFQTIPESG-----VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 439

Query: 285 NPDVVTYTSVIRGFCY-----------------------------------ANDWNEAKR 309
           +PD+ TYTS+I  +C                                     N    A +
Sbjct: 440 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 499

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW---RGVNPNTYTYNTLID 366
           LF  M  +G   D + ++++++ + +  K DKA  +LE +I    R  NP++   + L++
Sbjct: 500 LFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVE 559

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
             C   K D A++L   M   G    V SYN L++   + +  +EA  ++  M+S G  P
Sbjct: 560 SLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAP 619

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            + T N +   L    +V+ A +L   M +     D  T N  I G CKSG    A +L 
Sbjct: 620 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLL 679

Query: 487 RAIRDSKYELNIVSYNCL 504
             + ++  E N  +++ L
Sbjct: 680 EEMTEAGLEPNDTTHDLL 697



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 179/384 (46%), Gaps = 11/384 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M R +  PP V + NIL   L K K  +    L+ R+   G  PDI T++ 
Sbjct: 319 DDAYELFQLMERRN-CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK  +V   F +   I  S  +  NAVT+++L  G  A  R+ +A  +F+     
Sbjct: 378 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 437

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD+ TY +LI   C+T   +  + L EEMA+          P   T + ++ GL + 
Sbjct: 438 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG------FPPRVNTLSAVLGGLFEG 491

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDV 323
              ++A +LF  M       D + Y  V+ G   A+  ++A  +    I+  D+   P  
Sbjct: 492 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSS 551

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
                +++ LC+ GK D A +LL  M  RG      +YN L+ G     + D A ++F +
Sbjct: 552 SAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEA 611

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S G   ++ + N +I+W C    V++A  L   M   G  P + T NTL  G  +  +
Sbjct: 612 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 671

Query: 444 VERALKLFDEMRRNHVAADTYTYN 467
            + A KL +EM    +  +  T++
Sbjct: 672 ADLARKLLEEMTEAGLEPNDTTHD 695



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 2/234 (0%)

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           LF       +  +V +    +   C  N   EA  LF   M +   P+  T+ +++    
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
             G +D A +LLE M   G   N   + TL+ G C   ++  A + F +M  + C  DV+
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVM 127

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  L++  CK    +EA  +  EM+++G  P  VT++TL  GL +    E+A ++ +++
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 455 RRNHVAADTYTYNNFIDGLC-KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  +      +   I  LC K   V  A ++   +    +   ++ +N +I+G
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 4/189 (2%)

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           D  E   LF +     V  +V + +  +D LC+  +  +A  L    + R   PN +TY 
Sbjct: 2   DKPELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYG 61

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G+     +D A +L   M+S+G   + V + TL+   C    V EAL  +  M +K
Sbjct: 62  ILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AK 120

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
              P V+TY  L   L +  + + A  +  EM     A DT T++  IDGLCK G   +A
Sbjct: 121 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180

Query: 483 LELFRAIRD 491
              FR + D
Sbjct: 181 ---FRVLED 186



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           H+V S N  ++  C+    +EAL+L+   +++   P   TY  L  G      ++ A++L
Sbjct: 20  HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQL 79

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +EM+ +    +   +   + GLC +G V+EALE FRA+       ++++Y  L+  L
Sbjct: 80  LEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAP-DVMTYTALVHAL 136


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 215/403 (53%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L K++ +D    +F+ ++   + PD+ + +ILI  FC++G V      
Sbjct: 225 PGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKF 284

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     TP+ V+F+ LI        +  A A   + +     PD   Y  +I G CR
Sbjct: 285 YKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCR 344

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL + +EM       G  C P+ VTYNT+++GLCK+  +  A++L  +M++  +
Sbjct: 345 AGSMSEALRVRDEMV------GFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ T+T++I G+C   ++  A +LF  ++ Q ++PDVVT++ ++D +C+ G + KA+ 
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  R + PN  TY+ LID +C   +++ A      M   G + ++ +YN++I  YC
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ +V++      +M    + P ++T+NTL  G  +   +  A  +F+ M +  V  D  
Sbjct: 519 RSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAV 578

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+G  + G + +A  +F+ + DS  E +  +Y  LI+G
Sbjct: 579 TYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 206/399 (51%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+     K   +D   ++   +    +FPD+ TH++LI+   + G V     ++  +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 P  VT+ S++KGLC   R  +A  +F      +  PDV ++N LI G CR G  
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+  ++EM +          P+ V+++ +I    + G +D A     +MK   + PD 
Sbjct: 279 KEAVKFYKEMQH------RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDG 332

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V YT VI GFC A   +EA R+  EM+  G  PDVVT++ +++ LCK  ++  A +LL  
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE 392

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV P+  T+ TLI GYC     ++A +LF ++       DVV+YN+LI+  C+  D
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           + +A  L+ +M ++ I P  +TY+ L     E  QVE A    DEM +     +  TYN+
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+SG V +  +  + +R      +++++N LI G
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 201/381 (52%), Gaps = 6/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFNIL G   +       +  +K +    + PD+ + S LI  F + G + H    
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ V +T +I G C    + EA  +  +   F C PDV TYNTL+NGLC+
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A  L  EM     E GV   P+  T+ T+I G C++G  + A +LF  +  + +
Sbjct: 380 QHRLLDAEKLLNEME----ERGVT--PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY S+I G C   D  +A  L+ +M  + + P+ +T+S+++D  C+ G+++ A  
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFG 493

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ M+ +G  PN  TYN++I GYC +  +   ++    M  +    D++++NTLI+ Y 
Sbjct: 494 FLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYI 553

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +++  A ++++ M  + ++P  VTYN +  G  E   ++ A ++F  M  + +  D Y
Sbjct: 554 KEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRY 613

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
           TY + I+G   +G   +A +L
Sbjct: 614 TYMSLINGHVTAGNSKQAFQL 634



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 201/420 (47%), Gaps = 42/420 (10%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA   F  +L  H  P P S+ N L   L++          ++ + S+    + YT +
Sbjct: 103 PREAFEAFRLLLD-HRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLN 161

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+++ +CK         V+  + + C                                VF
Sbjct: 162 IMVHSYCKTLEFDGADTVISEMEKRC--------------------------------VF 189

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV T+N LI+   R G    A+ L + MAN         KP  VTYN+++ GLCK 
Sbjct: 190 ---PDVVTHNVLIDARFRAGDVDAAIALVDSMANRG------LKPGIVTYNSVLKGLCKH 240

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              DKAKE+F  M   ++ PDV ++  +I GFC   +  EA + + EM  + V PDVV+F
Sbjct: 241 RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++    + G+MD A   L  M   G+ P+   Y  +I G+C    +  A ++   M  
Sbjct: 301 SCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC+ DVV+YNTL+N  CK   + +A  L +EM  +G+ P + T+ TL  G       E 
Sbjct: 361 FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFEN 420

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+LFD + R  +  D  TYN+ IDG+C+ G + +A EL+  +   +   N ++Y+ LID
Sbjct: 421 ALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILID 480



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 184/358 (51%), Gaps = 6/358 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SF+ L G  ++    D   +  + +   GL PD   ++++I  FC+ G +S    V
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ VT+ +L+ GLC + R+++A  L  +       PD+ T+ TLI+G CR
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL LF+ +           +P+ VTYN++IDG+C++G + KA EL+  M    I
Sbjct: 415 QGNFENALQLFDTLLRQR------LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +TY+ +I   C      +A     EM+ +G  P++ T++ I+   C++G + K  +
Sbjct: 469 LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQ 528

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ M    V P+  T+NTLI GY   + +  A  +F  ME      D V+YN +IN + 
Sbjct: 529 FLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFS 588

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +  ++++A  ++  M   GI+P   TY +L  G       ++A +L DEM     A D
Sbjct: 589 EQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 155/300 (51%), Gaps = 6/300 (2%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           E + +T N +++  C+T     A  +  EM            P+ VT+N +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A  L   M +  + P +VTY SV++G C    +++AK +F  M    V PDV +F++
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ G++ +A +  + M  R V P+  +++ LI  +    ++DHA      M+  G
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D V Y  +I  +C+   + EAL +  EM+  G  P VVTYNTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KL +EM    V  D  T+   I G C+ G    AL+LF  +   +   ++V+YN LIDG+
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 10/257 (3%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N ++  L + G+   A+E +  +   +   +  T   ++  +C   +++ A  +  EM  
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + V PDVVT +V++D   + G +D A  L++ M  RG+ P   TYN+++ G C   + D 
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+++F +M+      DV S+N LI  +C+  +V+EA+  Y EM  + + P VV+++ L +
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL-I 304

Query: 437 GLFEIH-QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           GLF    +++ A     EM+   +  D   Y   I G C++G + EAL     +RD    
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR----VRDEMVG 360

Query: 496 L----NIVSYNCLIDGL 508
                ++V+YN L++GL
Sbjct: 361 FGCLPDVVTYNTLLNGL 377



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 116/233 (49%)

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           +E+   +   +  P    +  +IR +  +    EA   F  ++D  V       + ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L + G    A     L++      N YT N ++  YC T + D A  +   ME      D
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV++N LI+   +  DV+ A++L   M ++G+KP +VTYN++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            M +  VA D  ++N  I G C+ G V EA++ ++ ++      ++VS++CLI
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 218/419 (52%), Gaps = 10/419 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSILI 149
           +FD +LR       +   N     +A++     V S + R+  AG   + P++YT+S+LI
Sbjct: 34  VFDELLR-RGKGATIYGLNRALDDVARHSPAAAV-SRYNRMARAGADEVTPNLYTYSVLI 91

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKHRVFAC 208
            C C+ GR+  GF  LG +++  F   A+TFT L+KGLCA+ R  +A  +   +     C
Sbjct: 92  GCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQLGC 151

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+VF+   L+ GLC    +  AL L + M +  G+    C P+ V YNT+I+G  KEG 
Sbjct: 152 IPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVLYNTVINGFFKEGD 207

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            DKA   + +M D+ I PDVVTY+S+I   C A   ++A  +   M+  GV P+  T++ 
Sbjct: 208 PDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNS 267

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+   C +G++ +A   L++M   GV P+  T N L+D  C   +   ARK+F SM   G
Sbjct: 268 IVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCG 327

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +Y TL+  Y     + E   L   M+  GI+P    +N L     +  +V+ A+
Sbjct: 328 LKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAM 387

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +F +MR+  ++ +   Y   ID LCK G V +A+   + + +     +I+ Y  LI G
Sbjct: 388 LVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHG 446



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 121/230 (52%), Gaps = 3/230 (1%)

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM-D 340
           + + P++ TY+ +I   C A   +        ++ +G + + +TF+ ++  LC + +  D
Sbjct: 78  DEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 137

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG--CMHDVVSYNT 398
               +L  M   G  PN ++   L+ G C  ++   A +L   M  +G  C  DVV YNT
Sbjct: 138 AMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNT 197

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +IN + K  D ++A + Y EM  +GI P VVTY+++   L +   +++A+++ + M +N 
Sbjct: 198 VINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V  +  TYN+ + G C SG + EA+   + +     E ++V+ N L+D L
Sbjct: 258 VMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYL 307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 34/284 (11%)

Query: 97  MLRMHPS-----PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +L+M P      PP V  +N +     K    D   + +  +   G+ PD+ T+S +I  
Sbjct: 177 LLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAA 236

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            CK   +     VL  ++++   PN  T+ S++ G C+  ++ EA            EPD
Sbjct: 237 LCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPD 296

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFGVVC------- 249
           V T N L++ LC+      A  +F  M                 G    G +        
Sbjct: 297 VVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLD 356

Query: 250 -------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                  +PN   +N +I    K+  VD+A  +F KM+ + ++P+ V Y +VI   C   
Sbjct: 357 LMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLG 416

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
              +A     +M+++G+ PD++ ++ ++   C   K +KA  L+
Sbjct: 417 RVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 207/381 (54%), Gaps = 6/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +  L     K+ +      LF  +    + PD  T++ +I+  C+ G+V     +
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+ VT+T+LI G C    + EA +L  +       P+V TY  L++GLC+
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   +A  L  EM+    E G+  +PN  TYN +I+GLCK G +++A +L  +M     
Sbjct: 475 CGEVDIANELLHEMS----EKGL--QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TYT+++  +C   +  +A  L   M+D+G+QP +VTF+V+M+  C +G ++   R
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ M+ +G+ PN  T+N+L+  YC+ + +    +++  M + G + D  +YN LI  +C
Sbjct: 589 LIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC 648

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K ++++EA  L+ EM+ KG   T  +YN+L  G ++  + E A KLF+EMR +   A+  
Sbjct: 649 KARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKE 708

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
            Y+ F+D   + G     LEL
Sbjct: 709 IYDIFVDVNYEEGNWENTLEL 729



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 212/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++++     + +    VL L + L   GL P+ YT++ +I+  CK GRV     V
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ V +T+LI G      +     LF + +     PD  TY ++I+GLC+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  LF EM +         KP+ VTY  +IDG CK G + +A  L  +M ++ +
Sbjct: 405 AGKVVEARKLFSEMLSKG------LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTYT+++ G C   + + A  L  EM ++G+QP+V T++ +++ LCK G +++A +
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+E M   G  P+T TY T++D YC   ++  A +L   M   G    +V++N L+N +C
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +  +E+   L   ML KGI P   T+N+L       + +   ++++  M    V  DT 
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTN 638

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I G CK+  + EA  L + + +  + L   SYN LI G 
Sbjct: 639 TYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 202/381 (53%), Gaps = 6/381 (1%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           T   +F+  +  G+  +  +++I+++  C++G+V     +L ++      P+ V+++ ++
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIV 294

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            G C   ++ +   L  + +    +P+ +TYN++I+ LC+TG  + A  +   M N    
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR-- 352

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                 P+ V Y T+I G  K G V    +LF +MK + I PD VTYTS+I G C A   
Sbjct: 353 ----IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            EA++LF EM+ +G++PD VT++ ++D  CK G+M +A  L   M+ +G+ PN  TY  L
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTAL 468

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +DG C   ++D A +L   M   G   +V +YN LIN  CK  ++E+A+ L  EM   G 
Sbjct: 469 VDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P  +TY T+     ++ ++ +A +L   M    +     T+N  ++G C SG + +   
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588

Query: 485 LFRAIRDSKYELNIVSYNCLI 505
           L + + D     N  ++N L+
Sbjct: 589 LIKWMLDKGIMPNATTFNSLM 609



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 206/388 (53%), Gaps = 20/388 (5%)

Query: 133 LNSAGLFPDIYTHSILIN---CFCKMGRVSHGFVVLG---RILRS------CFTPNAVTF 180
           L +  LF  +  + +L++   C   + R+S+ F  +    R+ R       C+  N V++
Sbjct: 198 LEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCW--NTVSY 255

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
             ++  LC   ++ EA +L  +       PDV +Y+ +++G C+       L L EE+  
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                    KPN  TYN+II  LCK G V +A+++   MK++ I PD V YT++I GF  
Sbjct: 316 KG------LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           + + +   +LF EM  + + PD VT++ ++  LC+ GK+ +A +L   M+ +G+ P+  T
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT 429

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y  LIDGYC   ++  A  L   M   G   +VV+Y  L++  CK  +V+ A  L  EM 
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            KG++P V TYN L  GL ++  +E+A+KL +EM       DT TY   +D  CK G + 
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           +A EL R + D   +  IV++N L++G 
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGF 577



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 183/361 (50%), Gaps = 7/361 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R    P  V+  +++ G     K  +    LF  + S GL PD  T++ LI+ +
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEA-RKLFSEMLSKGLKPDEVTYTALIDGY 437

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +   F +  +++    TPN VT+T+L+ GLC    +  A  L  +      +P+V
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LINGLC+ G+   A+ L EEM +  G F     P+T+TY TI+D  CK G + KA
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEM-DLAGFF-----PDTITYTTIMDAYCKMGEMAKA 551

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL   M D+ + P +VT+  ++ GFC +    + +RL   M+D+G+ P+  TF+ +M +
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C    M     + + M  +GV P+T TYN LI G+C    +  A  L   M   G    
Sbjct: 612 YCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLT 671

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             SYN+LI  + K K  EEA  L+ EM + G       Y+      +E    E  L+L D
Sbjct: 672 AASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCD 731

Query: 453 E 453
           E
Sbjct: 732 E 732



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI-VA 231
           +  + + F    + L     ++EA  LF K   +     V + N  +  L  +   I  A
Sbjct: 177 WGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTA 236

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             +F E +    E GV    NTV+YN I+  LC+ G V +A  L ++M+     PDVV+Y
Sbjct: 237 FRVFREYS----EVGVCW--NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSY 290

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           + ++ G+C      +  +L  E+  +G++P+  T++ I+  LCK G++ +A ++L +M  
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           + + P+   Y TLI G+  +  +    KLF  M+    + D V+Y ++I+  C+   V E
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  L+SEMLSKG+KP  VTY  L  G  +  +++ A  L ++M    +  +  TY   +D
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G V  A EL   + +   + N+ +YN LI+GL
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGL 507


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 220/407 (54%), Gaps = 10/407 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN++   + K    D  + +F+ +      PD++T+  L++  CK  R+    ++
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L  + +  CF P++VTF  LI GLC +  ++    L     +  C P+  TYNT+INGLC
Sbjct: 230 LDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A++L + M          C PN VTY T+I+GL K+G       L   +++  
Sbjct: 289 LKGKLDKAVSLLDRMVASK------CVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            + +   Y+++I G        EA  L+ +M+++G QP++V +S ++D LC+ GK+D+A 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M+ +G  PN +TY++LI G+  T     A +++  M  N C+ + + Y+ LI+  
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAA 461
           C++  + EA+ +++ ML +G++P VV Y+++  GL     VE  LKLF+EM  + +    
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TYN  +  LCK   +  A++L  ++ D     ++++ N  ++ L
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 211/443 (47%), Gaps = 59/443 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+ +F  M  +    P V ++  L   L K    D  + L   +   G FP   T ++
Sbjct: 189 DRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNV 247

Query: 148 LINCFCKMG---RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           LIN  CK G   RV+   +V    L+ C  PN VT+ ++I GLC + ++ +A +L  +  
Sbjct: 248 LINGLCKKGDMVRVTK--LVDNMFLKGC-VPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 304

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLF---EEMANGNGEFGVV------------- 248
              C P+  TY TLINGL + G ++  ++L    EE  +   E+                
Sbjct: 305 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 364

Query: 249 -------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                        C+PN V Y+ +IDGLC+EG +D+AKE+  +M ++   P+  TY+S+I
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           +GF    +  +A R++ EM      P+ + +SV++  LC++GK+ +A  +   M+ RG+ 
Sbjct: 425 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 484

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           P+   Y+++I G C    ++   KLF  M  + +    DVV+YN L+   CK   +  A+
Sbjct: 485 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 544

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFE------------------IHQVER---ALKLFD 452
            L + ML +G  P ++T N     L E                  +H+ +R   A K+ +
Sbjct: 545 DLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIE 604

Query: 453 EMRRNHVAADTYTYNNFIDGLCK 475
            M +  +  +  T+   I  LCK
Sbjct: 605 VMLQKFLPPNASTWERIIPELCK 627



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 181/335 (54%), Gaps = 6/335 (1%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           +PN ++F  +IK +C    +  A  +F +  +  CEPDVFTY TL++GLC+      A+ 
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L +EM          C P++VT+N +I+GLCK+G + +  +L   M  +   P+ VTY +
Sbjct: 229 LLDEMQIEG------CFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G C     ++A  L   M+     P+ VT+  +++ L K G+      LL  +  RG
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            + N Y Y+TLI G    +K + A  L+  M   GC  ++V Y+ LI+  C+   ++EA 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +  EM++KG  P   TY++L  G F+    ++A++++ EM +N+   +   Y+  I GL
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C+ G + EA+ ++  +       ++V+Y+ +I GL
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 497



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 4/303 (1%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F C   V ++N+++N + + G    AL  +E    G         PN +++N +I  +CK
Sbjct: 129 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS----PNVLSFNLVIKAMCK 184

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G VD+A E+F +M  +   PDV TY +++ G C  +  +EA  L  EM  +G  P  VT
Sbjct: 185 LGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT 244

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+V+++ LCK G M + ++L++ M  +G  PN  TYNT+I+G CL  K+D A  L   M 
Sbjct: 245 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 304

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++ C+ + V+Y TLIN   K     + + L S +  +G       Y+TL  GLF+  + E
Sbjct: 305 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 364

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ L+ +M       +   Y+  IDGLC+ G + EA E+   + +     N  +Y+ LI
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424

Query: 506 DGL 508
            G 
Sbjct: 425 KGF 427



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 147/280 (52%), Gaps = 7/280 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL--KMKDENINPDV 288
           A+ LF  M +   EF   C+    ++N++++ + +EG   +A E +        NI+P+V
Sbjct: 118 AIELFGRMVD---EFQ--CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 172

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +++  VI+  C     + A  +F EM  Q  +PDV T+  +MD LCK  ++D+A  LL+ 
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G  P++ T+N LI+G C    +    KL  +M   GC+ + V+YNT+IN  C    
Sbjct: 233 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 292

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++A+SL   M++    P  VTY TL  GL +  +    + L   +      A+ Y Y+ 
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I GL K     EA+ L++ + +   + NIV Y+ LIDGL
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 392



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 65/346 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ + D M+     P  V+   ++ G + + +  D V  L   L   G   + Y +S 
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV-HLLSSLEERGHHANEYAYST 352

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K  +      +  +++     PN V +++LI GLC E ++ EA  +  +     
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+ FTY++LI G  +TG++  A+ +++EMA  N      C PN + Y+ +I GLC++G
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN------CVPNEICYSVLIHGLCEDG 466

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ--GVQPDVVT 325
            + +A  ++  M    + PDVV Y+S+I G C A       +LF EM+ Q    QPDVVT
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526

Query: 326 FSVIMDELCK-----------NGKMDK--------------------------------- 341
           +++++  LCK           N  +D+                                 
Sbjct: 527 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDEL 586

Query: 342 ------------ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                       A++++E+M+ + + PN  T+  +I   C   K+ 
Sbjct: 587 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 204/398 (51%), Gaps = 6/398 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S N +   L K      V S++K +    +  ++ T  ++IN  CK+G+      V+  +
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
               F+P+ +T+ ++I G C   ++ +A AL  +       P+  T+N LI+G CR  + 
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  +FEEM           +PN VTYN++I+GLC  G +D+A  L  KM    + P+V
Sbjct: 316 TAAKKVFEEMQRQG------LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY ++I GFC      EA+ +  ++  +G+ P+V+TF+ ++D   K G+MD A  L  +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  GV PN  TYN LI G+C    +  ARKL   ME NG   D+V+YN L++  CK  +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
             +A+ L  EM   G+ P+ +TYN L  G F       AL +   M +    A+  TYN 
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            I G C  G + EA  L   + +     N  +Y+ L D
Sbjct: 550 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 587



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/397 (34%), Positives = 208/397 (52%), Gaps = 9/397 (2%)

Query: 113 LFGCLAKNKHYD--TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           L    AKN HY   T+      L S G    I    +L+  + K G +        R   
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIV-DMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
             F  +A++   ++  L  E RI    +++ +        +V T++ +INGLC+ G    
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A ++ E+M      +G    P+ +TYNTIIDG CK G + KA  L  +M  + I+P+ +T
Sbjct: 248 AGDVVEDMK----AWGF--SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           +  +I GFC   +   AK++F EM  QG+QP+VVT++ +++ LC NGK+D+A  L + M 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G+ PN  TYN LI+G+C    +  AR++   +   G   +V+++NTLI+ Y K   ++
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A  L S ML  G+ P V TYN L +G      V+ A KL  EM  N + AD  TYN  +
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D LCK G   +A+ L   + +     + ++YN LIDG
Sbjct: 482 DALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG 518



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 198/397 (49%), Gaps = 6/397 (1%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           ++L     KN   D  L  F R    G      + + ++    K GR+     V   ++R
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
                N VTF  +I GLC   +  +A  +    + +   P V TYNT+I+G C+ G    
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  L +EM            PN +T+N +IDG C++  V  AK++F +M+ + + P+VVT
Sbjct: 283 ADALLKEMV------AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S+I G C     +EA  L  +M   G++P+VVT++ +++  CK   + +A  +L+ + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RG+ PN  T+NTLID Y    ++D A  L   M   G   +V +YN LI  +C+  +V+
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA  L  EM   G+K  +VTYN L   L +  +  +A++L DEM    +     TYN  I
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           DG  + G    AL +   +       NIV+YN LI G
Sbjct: 517 DGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 185/363 (50%), Gaps = 41/363 (11%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F+++   L K   +     + + + + G  P + T++ +I+ +CK G++     +L 
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     PN +TF  LI G C +  +  A  +F + +    +P+V TYN+LINGLC  G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL----------- 275
               AL L ++M+      G+  KPN VTYN +I+G CK+  + +A+E+           
Sbjct: 349 KLDEALGLQDKMS------GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 276 ---------------------FL---KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
                                FL    M D  + P+V TY  +I GFC   +  EA++L 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM   G++ D+VT+++++D LCK G+  KA RLL+ M   G+NP+  TYN LIDGY   
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFRE 522

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                A  +   ME  G   ++V+YN LI  +C    +EEA  L +EML KG+ P   TY
Sbjct: 523 GNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582

Query: 432 NTL 434
           + L
Sbjct: 583 DIL 585



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 230/498 (46%), Gaps = 35/498 (7%)

Query: 21  RCNFSSSFP-------HTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRAS-LKKFLKE 72
           RC  S+ FP       +T+ P SS +    +  + T       +L  K   S LK  +KE
Sbjct: 12  RC-LSTRFPSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKE 70

Query: 73  RCKSSGQGDI--NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
              SS    +  +   P+  LC F +  +   +   V  F  L   LA  K+Y+ + +L 
Sbjct: 71  TNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALL 130

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
                          S   N       + H   VLG    S    N++    L+      
Sbjct: 131 --------------DSFAKNAHYSNSTIFHSLSVLG----SWGCANSIIVDMLVWAYVKN 172

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             +  A   F +   +       + N ++  L + G   V  ++++EM       GV   
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR--RIGV--- 227

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            N VT++ +I+GLCK G   KA ++   MK    +P V+TY ++I G+C A    +A  L
Sbjct: 228 -NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADAL 286

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             EM+ + + P+ +TF++++D  C++  +  A ++ E M  +G+ PN  TYN+LI+G C 
Sbjct: 287 LKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS 346

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+D A  L   M   G   +VV+YN LIN +CK K ++EA  +  ++  +G+ P V+T
Sbjct: 347 NGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +NTL     +  +++ A  L   M    V  +  TYN  I G C+ G V EA +L + + 
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466

Query: 491 DSKYELNIVSYNCLIDGL 508
            +  + ++V+YN L+D L
Sbjct: 467 GNGLKADLVTYNILVDAL 484



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 110/271 (40%), Gaps = 58/271 (21%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D M  M   P  V ++N L     K K       +   +   GL P++ T + 
Sbjct: 351 DEALGLQDKMSGMGLKPN-VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF------- 200
           LI+ + K GR+   F++   +L +   PN  T+  LI G C E  + EA  L        
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 201 --------------------TKHRV--------FACEPDVFTYNTLINGLCRTGHTIVAL 232
                               T+  V            P   TYN LI+G  R G++  AL
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           N+   M           + N VTYN +I G C +G +++A  L  +M ++ + P+  TY 
Sbjct: 530 NVRTLMEKKGR------RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY- 582

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            ++R                EMM++G  PD+
Sbjct: 583 DILRD---------------EMMEKGFIPDI 598


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 216/401 (53%), Gaps = 9/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +S+FN L   L K         L  ++   G+ P+++T+++ I   C+ G +     ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     P+ +T+ +LI GLC  S+  EA     K      EPD +TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 227 HTIVALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
              +A     E   G+  F G V  P+  TY ++IDGLC EG  ++A  LF +   + I 
Sbjct: 336 MVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+V+ Y ++I+G        EA +L  EM ++G+ P+V TF+++++ LCK G +  A  L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           +++MI +G  P+ +T+N LI GY    K+++A ++   M  NG   DV +YN+L+N  CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
               E+ +  Y  M+ KG  P + T+N L   L    +++ AL L +EM+   V  D  T
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDS-KYELNIVSYNCLI 505
           +   IDG CK+G +  A  LFR + ++ K   +  +YN +I
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 200/396 (50%), Gaps = 15/396 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++   P P  ++  N+++G L KN  +        ++ + GL PD YT++ LI  +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYG-LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            V     ++G  + + F P+  T+ SLI GLC E     A ALF +      +P+V  YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TLI GL   G  + A  L  EM+    E G++  P   T+N +++GLCK G V  A  L 
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLV 449

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M  +   PD+ T+  +I G+        A  +   M+D GV PDV T++ +++ LCK 
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            K +      + M+ +G  PN +T+N L++  C   K+D A  L   M++     D V++
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            TLI+ +CKN D++ A +L+ +M     +  +  TYN +     E   V  A KLF EM 
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629

Query: 456 RNHVAADTYTYNNFIDGLCKSG-------FVLEALE 484
              +  D YTY   +DG CK+G       F+LE +E
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 214/456 (46%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F+ M   +   P V S+N +   L  + ++D    ++ R+   G+ PD+Y+ +I
Sbjct: 93  QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 148 LINCFCKMGR-----------------------------------VSHGFVVLGRILRSC 172
            +  FCK  R                                    + G+ + G++L S 
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +    TF  L++ LC +  + E   L  K       P++FTYN  I GLC+ G    A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +   +           KP+ +TYN +I GLCK     +A+    KM +E + PD  TY 
Sbjct: 272 RMVGCLIEQGP------KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G+C       A+R+  + +  G  PD  T+  ++D LC  G+ ++A  L    + +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN   YNTLI G      I  A +L   M   G + +V ++N L+N  CK   V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L   M+SKG  P + T+N L  G     ++E AL++ D M  N V  D YTYN+ ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+    + +E ++ + +     N+ ++N L++ L
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 29/385 (7%)

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           + + G+V     V  R+      P   ++ +++  L       +A  ++ + R     PD
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV----------------- 254
           V+++   +   C+T     AL L   M++   E  VV     V                 
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205

Query: 255 ------------TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                       T+N ++  LCK+G V + ++L  K+    + P++ TY   I+G C   
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           + + A R+   +++QG +PDV+T++ ++  LCKN K  +A   L  M+  G+ P++YTYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           TLI GYC    +  A ++      NG + D  +Y +LI+  C   +   AL+L++E L K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           GIKP V+ YNTL  GL     +  A +L +EM    +  +  T+N  ++GLCK G V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
             L + +    Y  +I ++N LI G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHG 470



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 163/335 (48%), Gaps = 12/335 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FNIL   L K         L K + S G FPDI+T +ILI+ +    ++ +   +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L +   P+  T+ SL+ GLC  S+  +    +       C P++FT+N L+  LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-N 283
                 AL L EEM N +        P+ VT+ T+IDG CK G +D A  LF KM++   
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++    TY  +I  F    +   A++LF EM+D+ + PD  T+ +++D  CK G ++   
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           + L  M+  G  P+  T   +I+  C+ D++  A  +   M   G + + V  NT+ +  
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICDV- 714

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             +K    A  L  E L K    T   Y  LF GL
Sbjct: 715 --DKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 8/280 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
           AL +F  M     E G   K    TY ++I+ L   G  +  +E+ + M+ EN+   ++ 
Sbjct: 23  ALEMFNSMRK---EVGF--KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLE 76

Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y   ++ +       EA  +F  M     +P V +++ IM  L  +G  D+A ++   
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RG+ P+ Y++   +  +C T +   A +L  +M S GC  +VV+Y T++  + +   
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
             E   L+ +ML+ G+   + T+N L   L +   V+   KL D++ +  V  + +TYN 
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FI GLC+ G +  A+ +   + +   + ++++YN LI GL
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M   +       ++NI+     +  +      LF+ +    L PD YT+ +++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + FCK G V+ G+  L  ++ + F P+  T   +I  LC E R+ EAA +   HR+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII--HRM 698


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 220/424 (51%), Gaps = 15/424 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M R   +P PP+  ++++     +   + + + + + L++ G   D+   ++
Sbjct: 140 DALAVLDEMPRRGCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNL 197

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C  G V     +L  +      P+ V++ +++KGLC   R      L  +    A
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI+ LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 258 CPPNIVTFNTLISYLCRNG-------LFERVHEVLAQMAEHG--CTPDIRMYATIIDGIC 308

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +  A E+  +M    + P+VV Y ++++G C A  W E + L  EM D+    D V
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            + GC  + +SY  ++   C  +   +A  L S+M+ +G     +T+NTL   L +   V
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+ +
Sbjct: 489 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548

Query: 505 IDGL 508
              L
Sbjct: 549 ASAL 552



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 209/405 (51%), Gaps = 12/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + N++   +      D  L L + L S G  PD+ +++ ++   C   R      ++ 
Sbjct: 192 VGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME 251

Query: 167 RILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            ++R    PN VTF +LI  LC      R+ E  A   +H    C PD+  Y T+I+G+C
Sbjct: 252 EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEH---GCTPDIRMYATIIDGIC 308

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + GH  VA  +   M +    +G+  KPN V YNT++ GLC     ++ +EL  +M D++
Sbjct: 309 KEGHLKVAHEILNRMPS----YGL--KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D VT+  ++  FC     +    L  +M+  G  PDV+T++ +++  CK G +D+A 
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+ M   G  PNT +Y  ++ G C  ++   A  L   M   GC  + +++NTLIN+ 
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   VE+A+ L  +ML  G  P +++Y+T+  GL +  + + AL+L + M    ++ +T
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 542

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y++    L + G + + +++F  I+D+    + V YN +I  L
Sbjct: 543 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 204/416 (49%), Gaps = 9/416 (2%)

Query: 96  YMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++LR  PS    P V S+N +   L   K +  V  L + +      P+I T + LI+  
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G       VL ++     TP+   + ++I G+C E  +  A  +  +   +  +P+V
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNV 332

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YNTL+ GLC          L  EM      F   C  + VT+N ++D  C+ G VD+ 
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEM------FDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL  +M      PDV+TYT+VI GFC     +EA  L   M   G +P+ +++++++  
Sbjct: 387 IELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC   +   A  L+  MI +G   N  T+NTLI+  C    ++ A +L   M  NGC  D
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           ++SY+T+I+   K    +EAL L + M++KG+ P  + Y+++   L    ++ + +++FD
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++   + +D   YN  I  LCK G    A+E    +  S    N  +Y  LI GL
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 200/395 (50%), Gaps = 9/395 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+RM   PP + +FN L   L +N  ++ V  +  ++   G  PDI  ++ +I+  
Sbjct: 249 LMEEMVRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGI 307

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     +L R+      PN V + +L+KGLC+  R  E   L  +     C  D 
Sbjct: 308 CKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 367

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
            T+N L++  C+ G     + L E+M  +G       C P+ +TY T+I+G CKEG +D+
Sbjct: 368 VTFNILVDFFCQNGLVDRVIELLEQMLVHG-------CMPDVITYTTVINGFCKEGLIDE 420

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A  L   M      P+ ++YT V++G C A  W +A+ L  +M+ QG   + +TF+ +++
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK G +++A  LL+ M+  G +P+  +Y+T+IDG     K D A +L   M + G   
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           + + Y+++ +   +   + + + ++  +    I+   V YN +   L +  + ERA++  
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             M  +    +  TY   I GL   GFV EA E+ 
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 149/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++   G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +++T ++KGLC+  R ++A  L ++     C  +  T+NTLIN LC+ G  
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  D+A EL   M ++ ++P+
Sbjct: 489 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 541

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK G+ ++A   L 
Sbjct: 542 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 601

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G      +  A+++   + S G + 
Sbjct: 602 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 645



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 153/365 (41%), Gaps = 47/365 (12%)

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           V  +SLI+ LCA  R  EAA   +     A    V  YN ++ G CR G    A  L   
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLAA- 114

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                    V   PN  TY  ++  LC  G +  A  +  +M      P    Y  ++  
Sbjct: 115 --------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEA 166

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C    +  A R+  ++  +G   DV   +++++ +C  G +DKA  LL  +   G  P+
Sbjct: 167 ACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPD 226

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN---KDVEEALS 414
             +YN ++ G C+  +    ++L   M    C  ++V++NTLI++ C+N   + V E L+
Sbjct: 227 VVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLA 286

Query: 415 LYSE--------------------------------MLSKGIKPTVVTYNTLFLGLFEIH 442
             +E                                M S G+KP VV YNTL  GL    
Sbjct: 287 QMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + E   +L  EM       D  T+N  +D  C++G V   +EL   +       ++++Y 
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYT 406

Query: 503 CLIDG 507
            +I+G
Sbjct: 407 TVING 411



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 3/253 (1%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN ++ G C+ G ++ A+ L   +    + P+  TY  V+R  C      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G  P    + VI++  C+ G    A R+LE +  RG   +    N +++  C    +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   + S GC  DVVSYN ++   C  K       L  EM+     P +VT+NTL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L      ER  ++  +M  +    D   Y   IDG+CK G +  A E+   +     +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 496 LNIVSYNCLIDGL 508
            N+V YN L+ GL
Sbjct: 330 PNVVCYNTLLKGL 342


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 202/370 (54%), Gaps = 7/370 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ +I+ FCK  R+     VL R+ R  F+P+ VT   +I   C + +I  A  +
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 200 FTKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           F +  +   C+P + TY  LI      G    AL L +EM +   E      P+T TYN 
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLE------PDTFTYNV 155

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I  GLCKEG VD+A E    +      PDV+TY  ++R       W+E ++   E+  +G
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +P+VVT+S+++  LC++GK++++  L+++M  +G+ P+ Y Y+ LI  +C   K+D A 
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +    M  +G + D+V+YNT++   CKN + + A+ ++ ++   G  P V +YNT+   L
Sbjct: 276 EFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           +      RAL +  +M    +  D  TYN+ I  LC+ G V EA+ L   +   +++ NI
Sbjct: 336 WSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNI 395

Query: 499 VSYNCLIDGL 508
           VSY  ++ GL
Sbjct: 396 VSYKTVLLGL 405



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 205/427 (48%), Gaps = 36/427 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K    ++  ++  R+   G  PD+ TH+I+I  FC  G++     V
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 165 LGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
              +L+  +C  P  +T+T LI+    E  I EA  L  +      EPD FTYN +  GL
Sbjct: 102 FEELLKDNNC-KPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 223 CRTG-----------------------HTIVALNLFEEMANGNGE------FGVVCKPNT 253
           C+ G                       + I+   L  +     GE      F   C+PN 
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           VTY+ +I  LC++G ++++  L   MK++ + PD   Y  +I  FC     + A      
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  G  PD+V ++ IM  LCKNG  D A  +   +   G  PN  +YNT++     +  
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A  +   M S G   DV++YN+LI+  C++  V+EA+ L ++MLS   +P +V+Y T
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           + LGL + H+++ A+++   M  N    +  TY   I+G+  SG   +A+EL     +S 
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL----ANSL 456

Query: 494 YELNIVS 500
           Y +N +S
Sbjct: 457 YIMNAIS 463



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 141/260 (54%), Gaps = 1/260 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP+   YN +I G CK   ++ AK +  +MK +  +PDVVT+  +I  FC     + A +
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 310 LFIEMM-DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +F E++ D   +P ++T++++++     G +D+A +LL+ M+ RG+ P+T+TYN +  G 
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K+D A +   ++ S GC  DV++YN L+         +E     SE+ S+G +P V
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY+ L   L    ++E ++ L   M+   +  D Y Y+  I   C+ G +  A+E    
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +    +  +IV+YN ++  L
Sbjct: 281 MICDGFLPDIVNYNTIMAAL 300



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 122/231 (52%), Gaps = 2/231 (0%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  ++  PDV+  T +I+GF  + + ++A R+ + ++++  +PDV  ++ ++   CK  +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRV-MGILEKHGKPDVFAYNAVISGFCKANR 59

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS-MESNGCMHDVVSYN 397
           ++ A  +L+ M  +G +P+  T+N +I  +C   KID A K+F   ++ N C   +++Y 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            LI  Y     ++EAL L  EMLS+G++P   TYN +  GL +  +V+RA +    +   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               D  TYN  +  L   G   E  +    I     E N+V+Y+ LI  L
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSL 230


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 9/418 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I + ML+   +P   S FNIL    A+ +  D  ++ F+ +      PD++T  IL++C 
Sbjct: 141 IHEEMLKAGIAPNTFS-FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 153 CKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           CK G     F V   ++   F P +    T++++ L    R+ EA  +F +       PD
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
              YNT+I+GL + GH   AL + + M          C P  VTY  +++ LCK G +++
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNM------LAKACVPTEVTYGILVNSLCKAGTLER 313

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A+ELF  M      P+ V YTS+I GF  +    EA  LF EM++ G +PDV+T +V++D
Sbjct: 314 AEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID 373

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK+G  ++A++  E M+  G  PN  TY T+I G     ++ +A ++   M ++GC  
Sbjct: 374 GLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP 433

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL-KL 450
           D V+Y  L++ +CK   ++EA  L  E+      P +  Y++L  GL +   VE  L  L
Sbjct: 434 DSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDL 493

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F++ +      D     + I GLCK+G + EA  +F+ +     + +  +YN LI+GL
Sbjct: 494 FEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/408 (33%), Positives = 199/408 (48%), Gaps = 9/408 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   ++N +   LAK  H    L +   + +    P   T+ IL+N  CK G +     
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +  S F PN+V +TSLI G     R+ EA +LF +       PDV T+  +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           ++G+   A   FEEM  G       CKPN VTY TII GL K G V  A  +   M    
Sbjct: 377 KSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA- 342
             PD VTY  ++ GFC     +EA +L  E+      P++  +S ++  LC  G ++   
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L E       N +     ++I G C T ++D A ++F  M S GC  D  +YN LIN 
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 403 YCKNKD--VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
            C++++  VE A +L  ++   G  P  VTY  L +GL +I +V+RA+K+ +E       
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           AD   Y     GLC  G V  A+ LF+ +       +  +Y C+I+GL
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 197/422 (46%), Gaps = 46/422 (10%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F+ M+R    P  V+   I+ G L+K         + K + + G FPD  T+  L++ FC
Sbjct: 388 FEEMMRGGCKPNVVTYTTIIQG-LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC-------------------AE---- 190
           K+GR+     +L  + +   +PN   ++SL+KGLC                   AE    
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP 506

Query: 191 -------------SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV--ALNLF 235
                         R+ EA  +F +     C+PD  TYN LINGLCR+    V  A  L 
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALL 566

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            ++        V   P+ VTY  +  GLCK G VD+A ++  +      N DVV YT++ 
Sbjct: 567 HDLEM------VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G CY    + A  LF EM+ QG  PD   +  I++ L K  K++ A +  + MI +G  
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK 680

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVVSYNTLINWYCKNKDVEEALS 414
           P   TY  L+   C    +D A   F  M + G  +  V+ Y+ LI+ +CK   V+ AL 
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALK 740

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ +M+S+G  PT VT  +LF GL    + E+A +L  EM          T+   +DGL 
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800

Query: 475 KS 476
           KS
Sbjct: 801 KS 802



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 219/464 (47%), Gaps = 54/464 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +FD M+     P  V +  ++   L K+ +++     F+ +   G  P++ T++ 
Sbjct: 347 KEACSLFDEMVEAGYRPD-VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405

Query: 148 LINCFCKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +I    K+GRV++ F ++ G I   CF P++VT+  L+ G C   R+ EAA L  +    
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALN-LFEE--MANGNGEFGVVCKPNTVTYNTIIDGL 263
           +  P++  Y++L+ GLC  G     L+ LFE+   A  N + G+ C        +II GL
Sbjct: 465 SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--------SIIVGL 516

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD---QGVQ 320
           CK G +D+A  +F +M  E   PD  TY  +I G C + + N  +R F  + D    G  
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEMVGYL 575

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD VT++ +   LCK G++D+A ++LE    RG N +   Y  L  G C   ++D A  L
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL-- 438
           F  M   G   D  +Y  +IN   K K +E+A   + EM+ KG KPTV TY  L   L  
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695

Query: 439 ----------FE------------------IH------QVERALKLFDEMRRNHVAADTY 464
                     FE                  IH      +V+ ALKLF++M          
Sbjct: 696 AGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T  +  DGL +SG   +A EL + +       +  ++  ++DGL
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 189/385 (49%), Gaps = 6/385 (1%)

Query: 125 TVLSLFKRLN-SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           T +S F+     AG   D++T++ L+N        S  + +   +L++   PN  +F  L
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I+      R  +A   F   +   C+PD+ T+  L++ LC+ G    A  +F EM     
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM---- 216

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
             G V  P+   +  ++  L K   V +A+E+F +M+     PD + Y ++I G   A  
Sbjct: 217 AMGFV-PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA ++   M+ +   P  VT+ ++++ LCK G +++A  L  +M   G  PN+  Y +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G+  + ++  A  LF  M   G   DV+++  +I+  CK+ + E+A   + EM+  G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            KP VVTY T+  GL +I +V  A ++   M  +    D+ TY   +DG CK G + EA 
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +L   +       N+  Y+ L+ GL
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGL 480



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 12/297 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +EA  IF  M+      P  +++NIL    C ++    +   +L   L   G  PD  T+
Sbjct: 523 DEACRIFQRMVS-EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + L    CK+G V     +L       +  + V +T+L  GLC + ++  A +LF +   
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PD   Y  +INGL +      A   F+EM  G G+     KP   TY  ++  LC 
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI-GKGQ-----KPTVATYTALVQALCH 695

Query: 266 EGFVDKAKELFLKM--KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            G VD+A   F  M  + E +   V+ Y ++I GFC A   + A +LF +M+ +G  P  
Sbjct: 696 AGNVDEAFHRFEGMLARGELVG-SVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           VT + + D L ++GK +KA  LL+ M   G  P+  T+  ++DG   +D+     KL
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 221/424 (52%), Gaps = 15/424 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M R   +P PP+  ++++     +   + + + + + L++ G   D+   ++
Sbjct: 177 DALAVLDEMPRRGCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNL 234

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C  G V     +L  +      P+ V++ +++KGLC   R      L  +    A
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI+ LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 295 CPPNIVTFNTLISYLCRNG-------LFERVHEVLAQMVEHG--CTPDIRMYATIIDGIC 345

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y ++++G C A  W E + L  EM D+    D V
Sbjct: 346 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 405

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            + GC  + +SY  ++   C  +   +A  L S+M+ +G     +T+NTL   L +   V
Sbjct: 466 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 525

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+ +
Sbjct: 526 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 585

Query: 505 IDGL 508
              L
Sbjct: 586 ASAL 589



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 210/405 (51%), Gaps = 12/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + N++   +      D  L L + L S G  PD+ +++ ++   C   R      ++ 
Sbjct: 229 VGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELME 288

Query: 167 RILRSCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            ++R    PN VTF +LI  LC      R+ E  A   +H    C PD+  Y T+I+G+C
Sbjct: 289 EMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEH---GCTPDIRMYATIIDGIC 345

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + GH  VA  +   M +    +G+  KPN V YNT++ GLC     ++ +EL  +M D++
Sbjct: 346 KEGHLEVAHEILNRMPS----YGL--KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D VT+  ++  FC     +    L  +M++ G  PDV+T++ +++  CK G +D+A 
Sbjct: 400 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 459

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+ M   G  PNT +Y  ++ G C  ++   A  L   M   GC  + +++NTLIN+ 
Sbjct: 460 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 519

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   VE+A+ L  +ML  G  P +++Y+T+  GL +  + + AL+L + M    ++ +T
Sbjct: 520 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNT 579

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y++    L + G + + +++F  I+D+    + V YN +I  L
Sbjct: 580 IIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 624



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 206/416 (49%), Gaps = 9/416 (2%)

Query: 96  YMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++LR  PS    P V S+N +   L   K +  V  L + +      P+I T + LI+  
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G       VL +++    TP+   + ++I G+C E  +  A  +  +   +  +P+V
Sbjct: 310 CRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNV 369

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YNTL+ GLC          L  EM      F   C  + VT+N ++D  C+ G VD+ 
Sbjct: 370 VCYNTLLKGLCSAERWEETEELLAEM------FDKDCPLDDVTFNILVDFFCQNGLVDRV 423

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL  +M +    PDV+TYT+VI GFC     +EA  L   M   G +P+ +++++++  
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 483

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC   +   A  L+  MI +G   N  T+NTLI+  C    ++ A +L   M  NGC  D
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           ++SY+T+I+   K    +EAL L + M++KG+ P  + Y+++   L    ++ + +++FD
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++   + +D   YN  I  LCK G    A+E    +  S    N  +Y  LI GL
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 200/394 (50%), Gaps = 7/394 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+RM   PP + +FN L   L +N  ++ V  +  ++   G  PDI  ++ +I+  
Sbjct: 286 LMEEMVRMA-CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGI 344

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     +L R+      PN V + +L+KGLC+  R  E   L  +     C  D 
Sbjct: 345 CKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDD 404

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+N L++  C+ G     + L E+M     E G  C P+ +TY T+I+G CKEG +D+A
Sbjct: 405 VTFNILVDFFCQNGLVDRVIELLEQML----EHG--CMPDVITYTTVINGFCKEGLIDEA 458

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L   M      P+ ++YT V++G C A  W +A+ L  +M+ QG   + +TF+ +++ 
Sbjct: 459 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF 518

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G +++A  LL+ M+  G +P+  +Y+T+IDG     K D A +L   M + G   +
Sbjct: 519 LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 578

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + Y+++ +   +   + + + ++  +    I+   V YN +   L +  + ERA++   
Sbjct: 579 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 638

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            M  +    +  TY   I GL   GFV EA E+ 
Sbjct: 639 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 149/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++   G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +++T ++KGLC+  R ++A  L ++     C  +  T+NTLIN LC+ G  
Sbjct: 466 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 525

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  D+A EL   M ++ ++P+
Sbjct: 526 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 578

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK G+ ++A   L 
Sbjct: 579 TIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLA 638

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G      +  A+++   + S G + 
Sbjct: 639 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 682



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   L   + ++    L   +       D  T +IL++ FC+ G V     +
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     P+ +T+T++I G C E  I EA  L        C+P+  +Y  ++ GLC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A +L  +M          C  N +T+NT+I+ LCK+G V++A EL  +M     
Sbjct: 487 AERWVDAEDLMSQMIQQG------CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 540

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD+++Y++VI G   A   +EA  L   M+++G+ P+ + +S I   L + G+++K  +
Sbjct: 541 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 600

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + +    +  +   YN +I   C   + + A +    M S+GC+ +  +Y  LI    
Sbjct: 601 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 660

Query: 405 KNKDVEEALSLYSEMLSKG 423
               V+EA  + +E+ SKG
Sbjct: 661 SEGFVKEAQEMLTELCSKG 679



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 12/331 (3%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
            +V  +SLI+ LCA  R  EAA   +     A    V  YN ++ G CR G    A  L 
Sbjct: 94  GSVRLSSLIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLESARRLA 150

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                      V   PN  TY  ++  LC  G +  A  +  +M      P    Y  ++
Sbjct: 151 A---------AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVIL 201

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
              C    +  A R+  ++  +G   DV   +++++ +C  G +D+A  LL  +   G  
Sbjct: 202 EAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCE 261

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+  +YN ++ G C+  +    ++L   M    C  ++V++NTLI++ C+N   E    +
Sbjct: 262 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 321

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            ++M+  G  P +  Y T+  G+ +   +E A ++ + M    +  +   YN  + GLC 
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           +    E  EL   + D    L+ V++N L+D
Sbjct: 382 AERWEETEELLAEMFDKDCPLDDVTFNILVD 412



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 3/253 (1%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN ++ G C+ G ++ A+ L   +    + P+  TY  V+R  C      +A  +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G  P    + VI++  C+ G    A R+LE +  RG   +    N +++  C    +D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   + S GC  DVVSYN ++   C  K       L  EM+     P +VT+NTL 
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L      ER  ++  +M  +    D   Y   IDG+CK G +  A E+   +     +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 496 LNIVSYNCLIDGL 508
            N+V YN L+ GL
Sbjct: 367 PNVVCYNTLLKGL 379


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 185/344 (53%), Gaps = 6/344 (1%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           +++ L+    K GR  H +     +L +   PN  T+  L++ LC   R  EA ++F   
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C P+VF+Y+ LI GLCR      A  L  EM +G  +      PN VTY +++ GL
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVVTYGSLLSGL 132

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G + +A +LF +M      PD V Y  +I GF    D  EA RLF EM+++G  P V
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++    + G+  +   L + M+ +G  PN +T+N L+DG+C    +  A +LF+ 
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S GC  DVVSYNTLI   C      EA  L  EM+  G+ P +V+YN L  G  +   
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           ++ A+KLF E+ ++ +  D ++Y+  ID LC++G V  A  +F+
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 200/394 (50%), Gaps = 6/394 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L + + ++   S+F+ + + G  P+++++SILI   C+  +V     +
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN VT+ SL+ GLC   ++ EA  LF++     C PD   YN LI+G  +
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  LFEEM          C P   TYN+++ G  ++G   + + LF  M  +  
Sbjct: 170 KGDMGEAYRLFEEMLEKG------CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++ T+ +++ GFC   D  EA RLF+EM   G  PDVV+++ ++  +C  GK  +A R
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQR 283

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  MI  GV P+  +YN LIDGY  +  +DHA KLF  +  +G   D  SY+T+I+  C
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   V  A  ++ +M++ G  P       L +GL    ++  + +LF  M +        
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            YN  +  LCK+    +  E+F  + +  +  ++
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 204/397 (51%), Gaps = 6/397 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+N L   LAK+   D V   +  + +AG  P+ YT+  L+   C+  R      V   +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                +PN  +++ LI GLC   ++ EAA L  +      +P+V TY +L++GLC+ G  
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A++LF  M          C P+ V YN +IDG  K+G + +A  LF +M ++   P V
Sbjct: 139 KEAVDLFSRMVYRG------CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY S++ GF    ++   + LF +M+ QG  P++ TF+ ++D  CK G M +A RL   
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G  P+  +YNTLI G C   K   A++L   M  +G   D+VSYN LI+ Y K+  
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A+ L+ E+   G++P   +Y+T+   L    +V  A  +F +M  N  A D      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + GLC+   + E+ ELF+A+   +    I  YN L+
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 173/336 (51%), Gaps = 6/336 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           +    +++  L++ L    R       +       C P+ +TY  L+  LC+      A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           ++F  MA         C PN  +Y+ +I GLC+   VD+A EL  +M D    P+VVTY 
Sbjct: 73  SVFRGMAAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S++ G C      EA  LF  M+ +G  PD V ++V++D   K G M +A RL E M+ +
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G  P  +TYN+L+ G+    +    + LF  M   GC+ ++ ++N L++ +CK  D+ EA
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+ EM S G  P VV+YNTL  G+    +   A +L  EM R+ V  D  +YN  IDG
Sbjct: 247 HRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             KSG +  A++LF  I  S  E +  SY+ +ID L
Sbjct: 307 YSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 7/325 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F  M+     PP    +N+L    +K         LF+ +   G  P ++T++ 
Sbjct: 139 KEAVDLFSRMV-YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F + G       +   +LR    PN  TF +L+ G C    ++EA  LF + R   
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV +YNTLI G+C  G    A  L  EM            P+ V+YN +IDG  K G
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG------VGPDIVSYNILIDGYSKSG 311

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +LF ++    + PD  +Y+++I   C A     A  +F +M+  G  PD     
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC+  ++ ++  L + M+     P    YN L+   C   + D   ++F  +   
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEA 412
           G   DV     ++    ++ D + A
Sbjct: 432 GFSPDVEISKVILETLRRSDDKDAA 456


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 198/378 (52%), Gaps = 7/378 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F+ ML  +P PP +  FN L   + + K Y+TV+SLFK +   G+  ++ T SI
Sbjct: 22  DDALASFNRMLDRNPQPP-IIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +  V +GF V G+ L+  F P+ V FT+LI G+C   +   AA L  +  +  
Sbjct: 81  LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV T N+L+ G C  G       +F  M +         KP+  +Y+  I+G CK  
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG------LKPDVYSYSIFINGYCKVE 194

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A ELF +M    + P+ VTY ++I+  C A    +A+ LF +M   G+ PD++ +S
Sbjct: 195 KIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK G +D+   L + M  R V P+   Y  +I+G C + K+  A+++   +   
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV +Y  L++  C+   + EAL L+ +M   G  P   +YN L  G  + +     
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTV 374

Query: 448 LKLFDEMRRNHVAADTYT 465
           ++L  EM      AD  T
Sbjct: 375 VQLIHEMADRGFYADAVT 392



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 179/352 (50%), Gaps = 6/352 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G +        R+L     P  + F  L+  +    +     +LF +      + +V T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           + LIN  C   H     ++F +            KP+ V + T+IDG+C+ G  + A  L
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRG------FKPDVVIFTTLIDGVCRIGKTELAAGL 132

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +M      PDVVT  S++RG+C     ++ +++F  M+ +G++PDV ++S+ ++  CK
Sbjct: 133 LKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCK 192

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             K+D+A  L + M  RGV PN  TYNTLI   C   +   A+ LF  M + G   D+++
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+TL++ +CK  +++E L L+ EM  + +KP +V Y  +  G+    +V+ A ++   + 
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLI 312

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +  D +TY   +DGLC+ G ++EAL LFR + +        SYN L+ G
Sbjct: 313 VEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 6/300 (2%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P +  +N L++ + R       ++LF+EM     EF  + K N  T + +I+  C    
Sbjct: 37  QPPIIEFNRLLSSVVRMKKYETVVSLFKEM-----EFRGI-KYNVCTLSILINCFCFLHH 90

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD    +F K       PDVV +T++I G C       A  L  EM   G  PDVVT + 
Sbjct: 91  VDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNS 150

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M   C  GK+DK  ++  LM+ +G+ P+ Y+Y+  I+GYC  +KID A +LF  M   G
Sbjct: 151 LMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRG 210

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + + V+YNTLI   C+     +A  L+ +M + G+ P ++ Y+TL  G  +   ++  L
Sbjct: 211 VVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEML 270

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF EM+R  V  D   Y   I+G+C+S  V +A E+   +     + ++ +Y  L+DGL
Sbjct: 271 VLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGL 330



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 150/276 (54%)

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           NL + +A+ N       +P  + +N ++  + +    +    LF +M+   I  +V T +
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            +I  FC+ +  +    +F + + +G +PDVV F+ ++D +C+ GK + A+ LL+ M   
Sbjct: 80  ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G  P+  T N+L+ GYC   KID  RK+F  M S G   DV SY+  IN YCK + ++EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + L+ EM  +G+ P  VTYNTL   L +  +   A  LF +M    ++ D   Y+  +DG
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            CK G + E L LF+ ++    + ++V Y  +I+G+
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGM 295



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 29/261 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N L          D V  +F  + S GL PD+Y++SI IN +CK+ ++     +
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PNAVT+ +LIK LC   R  +A  LF K       PD+  Y+TL++G C+
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCK 262

Query: 225 TGHTIVALNLFEEMA---------------NGNGEFGVV--------------CKPNTVT 255
            G+    L LF+EM                NG      V               KP+  T
Sbjct: 263 QGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHT 322

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  ++DGLC+EG + +A  LF KM+++   P   +Y  +++G    ND +   +L  EM 
Sbjct: 323 YTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMA 382

Query: 316 DQGVQPDVVTFSVIMDELCKN 336
           D+G   D VT + + D L  N
Sbjct: 383 DRGFYADAVTRTFLKDFLPGN 403



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 103/209 (49%)

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
           Y  + ++A   F  M+D+  QP ++ F+ ++  + +  K +    L + M +RG+  N  
Sbjct: 17  YFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVC 76

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           T + LI+ +C    +D+   +F      G   DVV + TLI+  C+    E A  L  EM
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G  P VVT N+L  G     ++++  K+F  M    +  D Y+Y+ FI+G CK   +
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EA+ELF  +       N V+YN LI  L
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKAL 225


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 199/404 (49%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S N     L+K    D     F+ +  AG+ P ++T++I+I   CK G +     +
Sbjct: 95  PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++ +   TP+ VT+ +LI G      + E+  LF + +   CEPDV TYN LIN  C+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A   F EM + +       KPN ++Y+T+ID LCKEG +  A + F+ M    +
Sbjct: 215 FKGMLRAFEFFREMKDKD------LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGL 268

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TY+S+I   C A +  EA  L  EM+ + V  ++VT++ ++D LC+ G M++A  
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   GV PN   Y  LI G+     +D A +LF  M       D++ + T++   C
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               +EE   + +EM   GI    V Y TL    F+      A+ L +EMR         
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T+   IDGLCK G V EA+  F  + D   + N+  Y  LIDGL
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGL 492



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 206/419 (49%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F+ M +M  +P  V+ +N L     K    D  + LF+ +   G  PD+ T++ LI
Sbjct: 151 ARSLFEQMKKMGLTPDIVT-YNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALI 209

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N FCK   +   F     +      PN +++++LI  LC E  +  A   F         
Sbjct: 210 NSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLL 269

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+ FTY++LI+  C+ G+   A  L +EM   + +       N VTY T++DGLC+EG +
Sbjct: 270 PNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDL------NIVTYTTLLDGLCEEGMM 323

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+ELF  M    + P++  YT++I G       ++A  LF EM ++ ++PD++ +  I
Sbjct: 324 NEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTI 383

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LC   K+++   ++  M   G+  N   Y TL+D Y        A  L   M   G 
Sbjct: 384 VWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGT 443

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              VV++  LI+  CK   V+EA+  +  M    ++P V  Y  L  GL + + +  A K
Sbjct: 444 EVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKK 503

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LFDEM+  ++  D   Y   IDG  K G   EAL +   + +   EL++ +Y  L+ GL
Sbjct: 504 LFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGL 562



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 188/381 (49%), Gaps = 6/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ L   L K       +  F  +   GL P+ +T+S LI+  CK G +   F++
Sbjct: 235 PNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFML 294

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+     N VT+T+L+ GLC E  + EA  LF         P++  Y  LI+G  +
Sbjct: 295 ADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIK 354

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ LF EM   +       KP+ + + TI+ GLC E  +++ K +  +MK+  I
Sbjct: 355 VRSMDKAMELFNEMREKD------IKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGI 408

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + V YT+++  +  A +  EA  L  EM D G +  VVTF  ++D LCK G + +A  
Sbjct: 409 GANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIY 468

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
               M    + PN   Y  LIDG C  + I  A+KLF  M+    + D ++Y  +I+   
Sbjct: 469 YFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNL 528

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ + +EAL++ ++M+  GI+  +  Y +L  GL +  QV++A K   EM    +  D  
Sbjct: 529 KHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDET 588

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
                +    + G + EA+EL
Sbjct: 589 LCTRLLRKHYELGNIDEAIEL 609



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 142/261 (54%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC P    ++ +   L + G ++ A + FL+M    + P   +  + +     A + + +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           +  F +M+  G+ P V T+++++  +CK G M  A  L E M   G+ P+  TYNTLIDG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y     +D +  LF  M+  GC  DV++YN LIN +CK K +  A   + EM  K +KP 
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V++Y+TL   L +   ++ A+K F +M R  +  + +TY++ ID  CK+G + EA  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +     +LNIV+Y  L+DGL
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGL 317



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + D ML+ H     V+   +L G L +    +    LF+ +  AG+ P++  ++ 
Sbjct: 289 GEAFMLADEMLQEHVDLNIVTYTTLLDG-LCEEGMMNEAEELFRAMGKAGVTPNLQAYTA 347

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K+  +     +   +      P+ + + +++ GLC+ES++ E   + T+ +   
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESG 407

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +   Y TL++   + G+   A+NL EEM +   E  VV      T+  +IDGLCK G
Sbjct: 408 IGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV------TFCALIDGLCKRG 461

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A   F +M D ++ P+V  YT++I G C  N   +AK+LF EM D+ + PD + ++
Sbjct: 462 LVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYT 521

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K+G   +A  +   M+  G+  + Y Y +L+ G     ++  ARK    M   
Sbjct: 522 AMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGK 581

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           G + D      L+  + +  +++EA+ L +E++ KG+
Sbjct: 582 GIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 53/121 (43%)

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           N C+     ++ L +   +   +E A   +  M    + P   + N     L +  + + 
Sbjct: 56  NVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDL 115

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           +   F +M    +A   +TYN  I  +CK G +L A  LF  ++      +IV+YN LID
Sbjct: 116 SRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175

Query: 507 G 507
           G
Sbjct: 176 G 176


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 222/451 (49%), Gaps = 31/451 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F  M R     P V ++N++   L K +  D    + +++ + G  PD  T+S 
Sbjct: 282 GKACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSC 340

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ +  +GR+     +   + +    PN VT  S +  LC   R  EAA  F       
Sbjct: 341 MIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKG 400

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------------NGEFGVV---- 248
            +PD+F+Y TL++G    G     + LF  M +NG                + G+V    
Sbjct: 401 HKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAM 460

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+ VTY+T+I    + G +  A E F +M    I P+   Y+S+I+GF
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520

Query: 299 CYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           C      +AK L  EM+++G+ +PD+V FS +++ LCK+G++  A  + +L    G  P 
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             T+N+LIDGYCL  K+D A K+  +ME  G   D+V+YNTL++ Y KN  + + L+L+ 
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           EM  KG+KP  VTY  +  GLF   +   A K F EM  +        Y   + GLC++ 
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EA+ LF+ +     + +I   N +I+ +
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAM 731



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 216/455 (47%), Gaps = 64/455 (14%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT--------VLSLFKRL--N 134
           ++ ++A  +FD + R   +P P  S N     LA+               L+LF R+   
Sbjct: 88  LSRDDAHHMFDELFR-QATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVCRE 146

Query: 135 SAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
            AG     P   T++IL++C C+  R   G  + G ILR+    + +T  +L+K LC  +
Sbjct: 147 EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYAN 206

Query: 192 RIMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           R  EA  +   HR+    C P+  +Y+ ++  LC    +  AL+L + MA   G     C
Sbjct: 207 RTEEAVNVLL-HRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGG----AC 261

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ V Y+T+I G   EG   KA  LF +M  + + PDVVTY  +I   C A   ++A+ 
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321

Query: 310 LFIEMMDQGVQPDVVTFSVI-----------------------------------MDELC 334
           +  +M   G QPD VT+S +                                   +  LC
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKIDHARKLFVSMESNGCM 390
           K+G+  +A+   + M  +G  P+ ++Y TL+ GY    C  D I     LF SM+SNG  
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG----LFNSMKSNGIA 437

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +   +  LI+ Y K   V++A+ +++EM  +G+ P VVTY+T+      + ++  A++ 
Sbjct: 438 ANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           F++M    +  +T  Y++ I G C  G +++A EL
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKEL 532



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 216/480 (45%), Gaps = 37/480 (7%)

Query: 65  SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLR----MHPSPPPVSSFNILFGCLAKN 120
           SL  FL    +++         P  AL +F+ + R       + P   ++NIL  C  + 
Sbjct: 111 SLNGFLAALARATSSSACITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRA 170

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVT 179
           +  D  L+LF  +   GL  D  T + L+ C C   R      V+L R+      PNAV+
Sbjct: 171 RRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVS 230

Query: 180 FTSLIKGLCAESRIMEAAALFT--KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           ++ ++K LC  S    A  L      +  AC PDV  Y+T+I+G    G T  A +LF E
Sbjct: 231 YSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHE 290

Query: 238 MANGNGEFGVV---------CK--------------------PNTVTYNTIIDGLCKEGF 268
           M     +  VV         CK                    P+TVTY+ +I G    G 
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A ++F +MK   + P++VT  S +   C      EA   F  M  +G +PD+ ++  
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++      G       L   M   G+  N + +  LI  Y     +D A  +F  M+  G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+Y+T+I+ + +   + +A+  +++M+++GI+P    Y+++  G      + +A 
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530

Query: 449 KLFDEMRRNHVA-ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +L  EM    +   D   +++ I+ LCK G V++A ++F    D      ++++N LIDG
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDG 590



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 214/454 (47%), Gaps = 22/454 (4%)

Query: 47  TTTSKLKESLRL--TVKDRA------SLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
            T  +LKE+ ++   +K R       +   FL   CK             EA   FD M 
Sbjct: 346 ATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG--------RSKEAAEFFDSMT 397

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
                P   S   +L G  A    +  ++ LF  + S G+  + +  +ILI+ + K G V
Sbjct: 398 AKGHKPDIFSYCTLLHG-YASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMV 456

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   + +   +P+ VT++++I       R+ +A   F +      +P+   Y+++
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSI 516

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  EM N       + +P+ V ++++I+ LCK+G V  A ++F  
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKG-----IPRPDIVFFSSVINSLCKDGRVMDAHDIFDL 571

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             D    P V+T+ S+I G+C     ++A ++   M   GV+PD+VT++ ++D   KNG+
Sbjct: 572 ATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGR 631

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           ++    L   M  +GV PNT TY  ++ G     +   ARK F  M  +G    V  Y  
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++   C+N   +EA+ L+ ++ +  +K ++   NT+   ++++ + E A +LF  +  + 
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +  +  TY   I  L K G V +A  +F ++  S
Sbjct: 752 LLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 186/374 (49%), Gaps = 7/374 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F IL    AK    D  + +F  +   G+ PD+ T+S +I+ F +MGR++       +++
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHT 228
                PN   ++S+I+G C    +++A  L ++        PD+  ++++IN LC+ G  
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A ++F+ +A   GE     +P  +T+N++IDG C  G +DKA ++   M+   + PD+
Sbjct: 563 MDAHDIFD-LATDIGE-----RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDI 616

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY +++ G+      N+   LF EM  +GV+P+ VT+ +++  L + G+   A +    
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           MI  G       Y  ++ G C  +  D A  LF  + +      +   NT+IN   K + 
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  L++ + + G+ P   TY  + + L +   VE A  +F  M ++ +   +   N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 469 FIDGLCKSGFVLEA 482
            I  L + G + +A
Sbjct: 797 IIRMLLEKGEIAKA 810



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 186/403 (46%), Gaps = 9/403 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N     L K+         F  + + G  PDI+++  L++ +   G  +    +
Sbjct: 368 PNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGL 427

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +    N   FT LI        + +A  +FT+ +     PDV TY+T+I+   R
Sbjct: 428 FNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR 487

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G    A+  F +M A G        +PNT  Y++II G C  G + KAKEL  +M ++ 
Sbjct: 488 MGRLTDAMEKFNQMVARG-------IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 284 I-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           I  PD+V ++SVI   C      +A  +F    D G +P V+TF+ ++D  C  GKMDKA
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            ++L+ M   GV P+  TYNTL+DGY    +I+    LF  M+  G   + V+Y  ++  
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
             +      A   + EM+  G   TV  Y  +  GL   +  + A+ LF ++   +V   
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFS 720

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
               N  I+ + K     EA ELF  I  S    N  +Y  +I
Sbjct: 721 ITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 3/226 (1%)

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA-SR 344
           P   TY  ++   C A   +    LF  ++  G++ D +T + ++  LC   + ++A + 
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG--CMHDVVSYNTLINW 402
           LL  M   G  PN  +Y+ ++   C       A  L   M   G  C  DVV+Y+T+I+ 
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +    +  +A SL+ EM  +G+KP VVTYN +   L +   +++A  +  +M  +    D
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T TY+  I G    G + EA ++FR ++      NIV+ N  +  L
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASL 380


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 219/433 (50%), Gaps = 30/433 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP + +F ++          D+ LSL + +   G  P+   +  LI+   K  RV+    
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      P+A TF  +I GLC   RI EAA +  +  +    PD  TY  L+NGLC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333

Query: 224 RTGHTIVALNLFEE----------------------------MANGNGEFGVVCKPNTVT 255
           + G    A +LF                              +++    +G+V  P+  T
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV--PDVCT 391

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I G  KEG V  A E+   M+++   P+V +YT ++ GFC     +EA  +  EM 
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G++P+ V F+ ++   CK  ++ +A  +   M  +G  P+ YT+N+LI G C  D+I 
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           HA  L   M S G + + V+YNTLIN + +  +++EA  L +EM+ +G     +TYN+L 
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL    +V++A  LF++M R+  A    + N  I+GLC+SG V EA+E  + +      
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631

Query: 496 LNIVSYNCLIDGL 508
            +IV++N LI+GL
Sbjct: 632 PDIVTFNSLINGL 644



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/422 (32%), Positives = 215/422 (50%), Gaps = 12/422 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL + + M  M    P   +FN +   L K    +    +  R+   G  PD  T+  
Sbjct: 269 NEALQLLEEMFLMG-CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-F 206
           L+N  CK+GRV     +  RI +    P  V F +LI G     R+ +A A+ +     +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV TYN+LI G  + G   +AL +  +M N        CKPN  +Y  ++DG CK 
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG------CKPNVYSYTILVDGFCKL 437

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A  +  +M  + + P+ V +  +I  FC  +   EA  +F EM  +G +PDV TF
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LC+  ++  A  LL  MI  GV  NT TYNTLI+ +    +I  ARKL   M  
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D ++YN+LI   C+  +V++A SL+ +ML  G  P+ ++ N L  GL     VE 
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A++   EM       D  T+N+ I+GLC++G + + L +FR ++      + V++N L+ 
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677

Query: 507 GL 508
            L
Sbjct: 678 WL 679



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 216/423 (51%), Gaps = 11/423 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +   +   M  ++   P   S+N++   L     +    ++F  + S  + P ++T  
Sbjct: 162 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++  FC +  +     +L  + +    PN+V + +LI  L   +R+ EA  L  +  + 
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PD  T+N +I GLC+       +N   +M N     G    P+ +TY  +++GLCK 
Sbjct: 282 GCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDITYGYLMNGLCKI 335

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
           G VD AK+LF ++      P++V + ++I GF      ++AK +  +M+   G+ PDV T
Sbjct: 336 GRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++    K G +  A  +L  M  +G  PN Y+Y  L+DG+C   KID A  +   M 
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++G   + V +N LI+ +CK   + EA+ ++ EM  KG KP V T+N+L  GL E+ +++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL L  +M    V A+T TYN  I+   + G + EA +L   +      L+ ++YN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571

Query: 506 DGL 508
            GL
Sbjct: 572 KGL 574



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 194/359 (54%), Gaps = 6/359 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +   M+  +   P V ++N L     K       L +   + + G  P++Y+++I
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK+G++   + VL  +      PN V F  LI   C E RI EA  +F +     
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PDV+T+N+LI+GLC       AL L  +M +     GVV   NTVTYNT+I+   + G
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTVTYNTLINAFLRRG 543

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A++L  +M  +    D +TY S+I+G C A + ++A+ LF +M+  G  P  ++ +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LC++G +++A    + M+ RG  P+  T+N+LI+G C   +I+    +F  +++ 
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           G   D V++NTL++W CK   V +A  L  E +  G  P   T++ L   +     ++R
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 136/276 (49%), Gaps = 10/276 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FN L     K       + +F+ +   G  PD+YT + LI+  C++  + H   +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP-DVFTYNTLINGLC 223
           L  ++      N VT+ +LI        I EA  L  +  VF   P D  TYN+LI GLC
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLC 575

Query: 224 RTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           R G    A +LFE+M  +G+        P+ ++ N +I+GLC+ G V++A E   +M   
Sbjct: 576 RAGEVDKARSLFEKMLRDGHA-------PSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              PD+VT+ S+I G C A    +   +F ++  +G+ PD VTF+ +M  LCK G +  A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             LL+  I  G  PN  T++ L+      + +D  R
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 5/254 (1%)

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y  +I  L   G       L ++MKDE I      + S++R +  A    +  RL +EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172

Query: 315 MD-QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            +    +P   +++V+++ L        A+ +   M+ R + P  +T+  ++  +C  ++
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ID A  L   M  +GC+ + V Y TLI+   K   V EAL L  EM   G  P   T+N 
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           + LGL +  ++  A K+ + M     A D  TY   ++GLCK G V  A +LF  I   +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352

Query: 494 YELNIVSYNCLIDG 507
               IV +N LI G
Sbjct: 353 ----IVIFNTLIHG 362



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 39/327 (11%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y  LI  L   G       L  +M +     G+V K +   + +I+    K GF  +  
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDE----GIVFKESL--FISIMRDYDKAGFPGQTT 166

Query: 274 ELFLKMKD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            L L+M++  +  P   +Y  V+      N    A  +F +M+ + + P + TF V+M  
Sbjct: 167 RLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 226

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C   ++D A  LL  M   G  PN+  Y TLI      ++++ A +L   M   GC+ D
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF- 451
             ++N +I   CK   + EA  + + ML +G  P  +TY  L  GL +I +V+ A  LF 
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346

Query: 452 -------------------------------DEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                                          D +    +  D  TYN+ I G  K G V 
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
            ALE+   +R+   + N+ SY  L+DG
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDG 433


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/420 (33%), Positives = 214/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+   + M + + SP  V+ +N +   L K         L   + S GL P+  T++IL
Sbjct: 226 DAVEFLNVMGKYNCSPDNVT-YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  +CKMG +     V+  + ++   P+  T+  LI GLC E RI EA  L  +      
Sbjct: 285 VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL 344

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV +YNTLING         A  L EEM+    E GV  KPN VT+N ++   CKEG 
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGK 398

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A     KM++   +PD VTY ++I G+C A +  EA R   EM  + ++ D VT + 
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  LC+  K+++A +LL     RG   +  +Y TLI GY     +D A KL+  M+   
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            +   V+YN +I   C+    E+A+S  +E+L  G+ P   TYNT+  G      VE+A 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  ++M  N    D +T N  + GLC  G + +AL+LF         ++ V+YN LI  L
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 229/455 (50%), Gaps = 18/455 (3%)

Query: 56  LRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG 115
           LRLT   +A L   +    +S GQ       P+ A  IF  M R+   P  ++  N L  
Sbjct: 128 LRLTSPSKALLDTAIGAYVQS-GQ-------PHHAFQIFKKMKRLRLRPNLLTC-NTLLN 178

Query: 116 CLAKNKHYDTVLSLFKRLNSA---GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
            L +     +V    +  N A   G+ P++ T +I+I  +C   +       L  + +  
Sbjct: 179 SLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN 238

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +P+ VT+ +++  LC + R+ +A  L    +     P+  TYN L+ G C+ G    A 
Sbjct: 239 CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           N+ E M   N        P+  TYN +I+GLC EG +++A +L  +M++  + PDVV+Y 
Sbjct: 299 NVIELMTQNN------LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYN 352

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G    +  +EA +L  EM ++GV+P+ VT ++++   CK GKMD AS  +  M   
Sbjct: 353 TLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES 412

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G +P+  TYNTLI+GYC    +  A +    M       D V+ NT++   C+ K +EEA
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L S    +G     V+Y TL +G F+   V+RALKL+DEM+   +   T TYN  I G
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LC+ G   +A+     + +S    +  +YN ++ G
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 191/382 (50%), Gaps = 6/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L      +    L   + +  L PD+ +++ LIN   +  ++S  F +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNAVT   ++K  C E ++ +A+   TK       PD  TYNTLING C+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A    +EM   N       K ++VT NTI+  LC+E  +++A +L    +    
Sbjct: 431 AGNMGEAFRTMDEMGRKN------MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V+Y ++I G+    + + A +L+ EM ++ + P  VT++ I+  LC+ GK ++A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  ++  G+ P+  TYNT++ GYC    ++ A +    M  N    DV + N L+   C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               +E+AL L++  +SKG     VTYNTL   L +  +++ A  L  EM    +  D Y
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 465 TYNNFIDGLCKSGFVLEALELF 486
           TYN  I  L  SG + EA E  
Sbjct: 665 TYNAIITALTDSGRIREAEEFM 686



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 173/405 (42%), Gaps = 53/405 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + + M      P  V+  NI+     K    D   +   ++  +G  PD  T++ 
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVT-HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +CK G +   F  +  + R     ++VT  ++++ LC E ++ EA  L +  R   
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK-------- 250
              D  +Y TLI G  + G+   AL L++EM            N   G +C+        
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+  TYNTI+ G C+EG V+KA +   KM + +  PDV T   ++RG 
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      +A +LF   + +G   D VT++ ++  LCK G++D A  LL  M  + + P+ 
Sbjct: 604 CMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDH 663

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCM-----------------------HDVVS 395
           YTYN +I     + +I  A +    M   G +                          V+
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVA 723

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           Y+  I   C     ++A+ ++ E   KGI     TY  L  GL +
Sbjct: 724 YSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 30/274 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL ++D M      P  V+ +N + G L +    +  +S    L  +GL PD  T++ 
Sbjct: 505 DRALKLWDEMKEKEIIPSTVT-YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++ +C+ G V   F    +++ + F P+  T   L++GLC E  + +A  LF       
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  TYNTLI  LC+ G    A NL  EM     E G    P+  TYN II  L   G
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHYTYNAIITALTDSG 677

Query: 268 FVDKAKELFLKMKDENINPD-----------------------VVTYTSVIRGFCYANDW 304
            + +A+E   KM ++   P                         V Y+  I+  C    +
Sbjct: 678 RIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKY 737

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            +A R+F E   +G+  D  T+  +MD L K  K
Sbjct: 738 KDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG---YCLTDKIDHA 377
           P        +    ++G+   A ++ + M    + PN  T NTL++    Y  +  +  +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           R+ F      G + +V ++N +I  YC     ++A+   + M      P  VTYNT+   
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  ++  A  L  +M+   +  +  TYN  + G CK G++ EA  +   +  +    +
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 498 IVSYNCLIDGL 508
           + +YN LI+GL
Sbjct: 313 VWTYNMLINGL 323



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 3/165 (1%)

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN---W 402
           L L I R  +P+    +T I  Y  + +  HA ++F  M+      ++++ NTL+N    
Sbjct: 123 LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR 182

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           Y  +  V  +   +++ +  GI P V T+N +  G    ++ + A++  + M + + + D
Sbjct: 183 YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPD 242

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             TYN  +D LCK G + +A +L   ++      N  +YN L+ G
Sbjct: 243 NVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287



 Score = 45.4 bits (106), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 23/144 (15%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L   L K    D   +L   +    L PD YT++ +I      GR+      + ++
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 169 LRSCFTPNAV-----------------------TFTSLIKGLCAESRIMEAAALFTKHRV 205
           L     P  V                        ++  IK LC E +  +A  +F + + 
Sbjct: 690 LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749

Query: 206 FACEPDVFTYNTLINGLCRTGHTI 229
                D  TY  L++GL +   +I
Sbjct: 750 KGITVDKSTYINLMDGLIKRRKSI 773


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 213/428 (49%), Gaps = 8/428 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           I+L    EA+  F  M R    P    S N L    AK    D V   FK +  AG  P 
Sbjct: 203 IDLGMLEEAIQCFSKMKRFRVFPK-TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           ++T++I+I+C CK G V     +   +      P+ VT+ S+I G     R+ +    F 
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           + +   CEPDV TYN LIN  C+ G   + L  + EM  GNG      KPN V+Y+T++D
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVD 375

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
             CKEG + +A + ++ M+   + P+  TYTS+I   C   + ++A RL  EM+  GV+ 
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT++ ++D LC   +M +A  L   M   GV PN  +YN LI G+     +D A +L 
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ++  G   D++ Y T I   C  + +E A  + +EM   GIK   + Y TL    F+ 
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVS 500
                 L L DEM+   +     T+   IDGLCK+  V +A++ F  I  D   + N   
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615

Query: 501 YNCLIDGL 508
           +  +IDGL
Sbjct: 616 FTAMIDGL 623



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    F+ LF  L      +  +  F ++    +FP   + + L++ F K+G+       
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   P   T+  +I  +C E  +  A  LF + +     PD  TYN++I+G  +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     +  FEEM +      + C+P+ +TYN +I+  CK G +    E + +MK   +
Sbjct: 310 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y++++  FC      +A + +++M   G+ P+  T++ ++D  CK G +  A R
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+  GV  N  TY  LIDG C  +++  A +LF  M++ G + ++ SYN LI+ + 
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K+++ AL L +E+  +GIKP ++ Y T   GL  + ++E A  + +EM+   + A++ 
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   +D   KSG   E L L   +++   E+ +V++  LIDGL
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 7/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ L     K       +  +  +   GL P+ YT++ LI+  CK+G +S  F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+     N VT+T+LI GLC   R+ EA  LF K       P++ +YN LI+G  +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   AL L  E+  G G      KP+ + Y T I GLC    ++ AK +  +MK+  I
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + + YT+++  +  + +  E   L  EM +  ++  VVTF V++D LCKN  + KA  
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598

Query: 345 LLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
               +    G+  N   +  +IDG C  ++++ A  LF  M   G + D  +Y +L++  
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +V EAL+L  +M   G+K  ++ Y +L  GL   +Q+++A    +EM    +  D 
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718

Query: 464 YTYNNFIDGLCKSGFVLEALEL 485
               + +    + G + EA+EL
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 142/261 (54%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC P    ++ +   L   G +++A + F KMK   + P   +   ++  F      ++ 
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           KR F +M+  G +P V T+++++D +CK G ++ A  L E M +RG+ P+T TYN++IDG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +    ++D     F  M+   C  DV++YN LIN +CK   +   L  Y EM   G+KP 
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VV+Y+TL     +   +++A+K + +MRR  +  + YTY + ID  CK G + +A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +     E N+V+Y  LIDGL
Sbjct: 427 EMLQVGVEWNVVTYTALIDGL 447


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 224/487 (45%), Gaps = 72/487 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             AL + D M R     P   S+N++   LA+   +   L L++R+    + P  +T  +
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
                C++GR      +L  + R    P+AV + ++I  L A+  + EAA L  +  +  
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK-- 265
           C  DV T+N L+ GLC  G    A  L + M          C P+ VTY  ++ GLC+  
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG------CMPSVVTYGFLLQGLCRTR 296

Query: 266 -----------------------------EGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
                                        EG + +A EL+  M  +   PDV TY+ ++ 
Sbjct: 297 QADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMH 356

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C    +  A R+  EM ++G  P++VT+S ++   C+NG  D A  +L+ M+ +G + 
Sbjct: 357 GLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSM 416

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA---- 412
           N+  YN +I   C   K+D A +L   M+S GC  D+ +YNT+I   C N  +EEA    
Sbjct: 417 NSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIF 476

Query: 413 -------------------------------LSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
                                          L L SEML  G +  V++YN L   L + 
Sbjct: 477 RNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKE 536

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             V+R++ L +EM    +  + ++YN  I+ LCK+G V +ALEL + + +     +IV+Y
Sbjct: 537 GNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTY 596

Query: 502 NCLIDGL 508
           N LI+GL
Sbjct: 597 NTLINGL 603



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 206/417 (49%), Gaps = 11/417 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D ML M  +   V++FN L   L           L  R+ + G  P + T+  L
Sbjct: 230 EAAMLLDEMLLMGCAAD-VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFL 288

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +   C+  +      +LGR+       N V   ++I+G   E ++  A  L+       C
Sbjct: 289 LQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGC 344

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TY+ L++GLC+ G    A+ + +EM     E G  C PN VTY+T++   C+ G 
Sbjct: 345 PPDVHTYSILMHGLCKLGRFGSAVRMLDEME----EKG--CAPNIVTYSTLLHSFCRNGM 398

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            D A+ +  +M  +  + +   Y  +I   C     ++A RL  EM  QG +PD+ T++ 
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC N  M++A  +   +I  GV  N  TYNTLI       +     +L   M  +G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  DV+SYN LI   CK  +V+ +++L  EM++KGIKP   +YN L   L +  +V  AL
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL 578

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +L  EM    +  D  TYN  I+GLCK G+   AL L   + +     +IV+YN LI
Sbjct: 579 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 187/371 (50%), Gaps = 7/371 (1%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++ GCL + K       L++ + S G  PD++T+SIL++  CK+GR      +L  +   
Sbjct: 319 VIRGCLTEGK-LARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEK 377

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              PN VT+++L+   C      +A A+  +        +   YN +I  LC+ G    A
Sbjct: 378 GCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQA 437

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             L +EM +        CKP+  TYNT+I  LC    +++A+ +F  + +E +  + +TY
Sbjct: 438 TRLVQEMKSQG------CKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I        W E  RL  EM+  G Q DV++++ ++  LCK G +D++  LLE M+ 
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +G+ PN ++YN LI+  C   K+  A +L   M + G   D+V+YNTLIN  CK      
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 611

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           AL+L  ++ ++ + P +VTYN L     ++  ++ A  L D+     +  +  T+   + 
Sbjct: 612 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671

Query: 472 GLCKSGFVLEA 482
              +    LE 
Sbjct: 672 NFVRQTVNLEG 682


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/405 (33%), Positives = 212/405 (52%), Gaps = 10/405 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N +  CLA+ +  +    LF++L +    P+++T +I+I+  CK G ++    
Sbjct: 160 PPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARA 215

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L R+     +P+ VT+ SLI G      + E   L  + R   C PDV TYN L+N  C
Sbjct: 216 LLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFC 275

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A + F EM       GV+   N VT++T +D  CK G V +A +LF +M+ + 
Sbjct: 276 KFGRMERAYSYFAEMKRE----GVM--ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKG 329

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+ VTYT ++ G C A   ++A  L  EM+ QGV  +VVT++V++D LCK GK+ +A 
Sbjct: 330 MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAE 389

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +  LM   G+  N   Y TLI G+ +    + A  L   M+  G   DV  Y  LI   
Sbjct: 390 DVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGL 449

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C  + ++EA SL ++M   G+KP  V Y  +    F+  +   A+ L  +M  +    + 
Sbjct: 450 CNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNI 509

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   +DGLCK+G + EA+  F  + D   E N+ +Y  L+DGL
Sbjct: 510 VTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 205/402 (50%), Gaps = 12/402 (2%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S  + L   LA     D  +    R+    + P+  T + ++ C  +  R S    +  R
Sbjct: 129 SVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLAR-ERSSE---LAWR 184

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +      PN  TF  +I  LC E  + EA AL  + +   C PDV TYN+LI+G  + G 
Sbjct: 185 LFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGE 244

Query: 228 TIVALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                   EE+    GE  G  C+P+ VTYN +++  CK G +++A   F +MK E +  
Sbjct: 245 -------LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VVT+++ +  FC      EA +LF +M  +G++P+ VT++ ++D  CK G++D A  L 
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+ +GV  N  TY  L+DG C   K+  A  +F  ME  G   + + Y TLI+ +   
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVY 417

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K+ E ALSL SEM  KG++  V  Y  L  GL  + +++ A  L ++M    +  +   Y
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            N +D   K+    EA+ L + + DS +  NIV+Y  L+DGL
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGL 519



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 201/404 (49%), Gaps = 8/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K    + V  L   +   G  PD+ T++ L+NCFCK GR+   +  
Sbjct: 227 PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSY 286

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R     N VTF++ +   C    + EA  LF + R+   +P+  TY  L++G C+
Sbjct: 287 FAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCK 346

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL L  EM             N VTY  ++DGLCKEG V +A+++F  M+   I
Sbjct: 347 AGRLDDALVLTNEMVQQGVPL------NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGI 400

Query: 285 NPDVVTYTSVIRG-FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             + + YT++I G F Y N    A  L  EM D+G++ DV  +  ++  LC   K+D+A 
Sbjct: 401 RANELLYTTLIHGHFVYKNS-ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAK 459

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M   G+ PN   Y  ++D      K   A  L   M  +G   ++V+Y  L++  
Sbjct: 460 SLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGL 519

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   ++EA+S +++M+  G++P V  Y  L  GL +  ++++A+ L DEM    ++ D 
Sbjct: 520 CKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDN 579

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               + +DG  K G + +A  L   + +S  +L++  Y C + G
Sbjct: 580 VVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWG 623



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F+       KN      + LF ++   G+ P+  T++ L++  CK GR+    V+  
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +++     N VT+T L+ GLC E ++ EA  +F          +   Y TLI+G     
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           ++  AL+L  EM +   E  V        Y  +I GLC    +D+AK L  KM +  + P
Sbjct: 419 NSERALSLLSEMKDKGMELDVS------LYGALIWGLCNLQKLDEAKSLLNKMDECGLKP 472

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + V YT+++     A   +EA  L  +MMD G +P++VT+  ++D LCK G +D+A    
Sbjct: 473 NNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHF 532

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+  G+ PN   Y  L+DG C   ++D A  L   M   G   D V   +L++ + K 
Sbjct: 533 NKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQ 592

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++++A +L ++M++ G++  +  Y     G   ++ ++ A ++  EM  N +  D   Y
Sbjct: 593 GNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVY 652

Query: 467 NNFIDGLCKSGFVLEA 482
           N  I+   K G + EA
Sbjct: 653 NCLINKCQKLGNMEEA 668


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 207/406 (50%), Gaps = 28/406 (6%)

Query: 118 AKNKHYDTVLSLFKRLNSAG-----------LFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           A+     T  +L K+L+++G             PD+  ++ ++  +C  G+V        
Sbjct: 93  ARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMMAGYCGAGQVDAAR---- 148

Query: 167 RILRSC----FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
              R C       +A T  +LI+GLC   R   A A+  +     C PDV TY  L+   
Sbjct: 149 ---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEAT 205

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A+ L +EM +        C P+ VTYN +++G+C+EG VD A E    +   
Sbjct: 206 CKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 259

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              P+ V+Y  V++G C A  W +A+ L  EM  +G  P+VVTF++++  LC+ G ++ A
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +LE +   G +PN+ +YN L+  +C   K+D A      M S GC  D+VSYNTL+  
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C++ +V+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM    +  D
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 439

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY+    GLC+   + +A+  F  ++D     N V YN +I GL
Sbjct: 440 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 200/368 (54%), Gaps = 6/368 (1%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D YT   LI   C  GR ++   VL  +LR    P+ VT+T L++  C  S   +A  L 
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + R   C PD+ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV+YN ++
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTVSYNIVL 272

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            GLC     + A+EL  +M  +   P+VVT+  +I   C       A  +  ++   G  
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+ ++++ ++   CK  KMDKA   L+LM+ RG  P+  +YNTL+   C + ++D A +L
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              ++  GC   ++SYNT+I+   K    +EAL L +EM+SKG++P ++TY+T+  GL  
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             ++E A++ F +++   +  +T  YN  I GLCK      A++LF  +  +    N  +
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 512

Query: 501 YNCLIDGL 508
           Y  LI+GL
Sbjct: 513 YTILIEGL 520



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 185/365 (50%), Gaps = 7/365 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D MLR     P V ++ IL     K   Y   + L   +   G  PDI T+++++
Sbjct: 179 ALAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 237

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  C+ GRV      L  +      PN V++  ++KGLC   R  +A  L  +     C 
Sbjct: 238 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 297

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V T+N LI+ LCR G    AL + E++     ++G  C PN+++YN ++   CK+  +
Sbjct: 298 PNVVTFNMLISFLCRKGLVEPALEVLEQIP----KYG--CSPNSLSYNPLLHAFCKQKKM 351

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DKA      M      PD+V+Y +++   C + + + A  L  ++ D+G  P +++++ +
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 411

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GK  +A  LL  M+ +G+ P+  TY+T+  G C  D+I+ A + F  ++  G 
Sbjct: 412 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V YN +I   CK ++   A+ L++ M+  G  P   TY  L  GL     ++ A  
Sbjct: 472 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 531

Query: 450 LFDEM 454
           L DE+
Sbjct: 532 LLDEL 536



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 62/150 (41%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           + L+     P + S+N +   L K       L L   + S GL PDI T+S +    C+ 
Sbjct: 394 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 453

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            R+       G++      PN V + ++I GLC       A  LF       C P+  TY
Sbjct: 454 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 513

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEF 245
             LI GL   G    A +L +E+ +   E 
Sbjct: 514 TILIEGLAYEGLIKEARDLLDELCSRGEEI 543


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 219/433 (50%), Gaps = 30/433 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP + +F ++   L      D+ LS+ + +   G  P+   +  LI+   K  RV+    
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 267

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +      P+A TF  +I GLC   RI EAA +  +  +    PD  TY  L+NGLC
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327

Query: 224 RTGHTIVALNLFEEMANGNG----------------------------EFGVVCKPNTVT 255
           + G    A +LF  +                                  +G+V  P+  T
Sbjct: 328 KIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV--PDVCT 385

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN++I G  K+G V  A E+   M+++   P+V +YT ++ GFC     +EA  L  EM 
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G++P+ V F+ ++   CK  ++ +A  +   M  +G  P+ YT+N+LI G C  D+I 
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           HA  L   M S G + + V+YNTLIN + +  +++EA  L +EM+ +G     +TYN+L 
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL    +V++A  LF++M R+ +   + + N  I+GLC+SG V EA+E  + +      
Sbjct: 566 KGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST 625

Query: 496 LNIVSYNCLIDGL 508
            +IV++N LI+GL
Sbjct: 626 PDIVTFNSLINGL 638



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 218/422 (51%), Gaps = 12/422 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL + + M  M    P   +FN +   L K    +    +  R+   G  PD  T+  
Sbjct: 263 NEALQLLEEMFLMG-CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-F 206
           L+N  CK+GRV     +  RI +    P +V F +LI G     R+ +A A+ +     +
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV TYN+LI G  + G   +AL +  +M N        CKPN  +Y  ++DG CK 
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG------CKPNVYSYTILVDGFCKL 431

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A  L  +M  + + P+ V +  +I  FC  +   EA  +F EM  +G +PDV TF
Sbjct: 432 GKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 491

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LC+  ++  A  LL  MI  GV  NT TYNTLI+ +    +I  ARKL   M  
Sbjct: 492 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 551

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + D ++YN+LI   C+  +V++A SL+ +ML  G+ P+ ++ N L  GL     VE 
Sbjct: 552 QGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A++   EM       D  T+N+ I+GLC++G + + L +FR ++      + V+YN L+ 
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671

Query: 507 GL 508
            L
Sbjct: 672 WL 673



 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 213/423 (50%), Gaps = 11/423 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +   +   M  ++   P   S+N++   L     +    ++F  + S  + P ++T  
Sbjct: 156 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 215

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++   C +  V     VL  + +    PN+V + +LI  L   +R+ EA  L  +  + 
Sbjct: 216 VVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 275

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PD  T+N +I GLC+       +N   +M N     G    P+ +TY  +++GLCK 
Sbjct: 276 GCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFT--PDDITYGYLMNGLCKI 329

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
           G VD AK+LF ++      P  V + ++I GF      ++AK +  +M+   G+ PDV T
Sbjct: 330 GRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++    K G +  A  +L  M  +G  PN Y+Y  L+DG+C   KID A  L   M 
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++G   + V +N LI+ +CK   + EA+ ++ EM  KG KP V T+N+L  GL E+ +++
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL L  +M    V A+T TYN  I+   + G + EA +L   +      L+ ++YN LI
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565

Query: 506 DGL 508
            GL
Sbjct: 566 KGL 568



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 196/359 (54%), Gaps = 6/359 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +   M+  +   P V ++N L     K       L + + + + G  P++Y+++I
Sbjct: 364 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTI 423

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK+G++   + +L  +      PN V F  LI   C E RI EA  +F +     
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PDV+T+N+LI+GLC       AL L  +M +     GVV   NTVTYNT+I+   + G
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTVTYNTLINAFLRRG 537

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A++L  +M  +    D +TY S+I+G C A + ++A+ LF +M+  G+ P  ++ +
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LC++G +++A    + M+ RG  P+  T+N+LI+G C   +I+    +F  +++ 
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           G   D V+YNTL++W CK   V +A  L  E +  G  P   T++ L   L     ++R
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y  +I  L   G       L ++MKDE I      + S++R +  A    +  RL +EM
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 166

Query: 315 MD-QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            +    +P   +++V+++ L        A+ +   M+ R + P  +T+  ++   C  ++
Sbjct: 167 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNE 226

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A  +   M  +GC+ + V Y TLI+   K   V EAL L  EM   G  P   T+N 
Sbjct: 227 VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 286

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           + LGL +  ++  A K+ + M       D  TY   ++GLCK G V  A +LF  I    
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPT 346

Query: 494 YELNIVSYNCLIDG 507
                V +N LI G
Sbjct: 347 S----VIFNTLIHG 356


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 216/430 (50%), Gaps = 14/430 (3%)

Query: 87  PNEALCIFDYMLRMHPSP----PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           P+ A+ +F+ + R    P    P V ++NIL  C  +        +LF R    GL  D+
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDV 154

Query: 143 YTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
              +IL+ C C   R      V+L R+      P+ +++++++K LC +SR   A  L  
Sbjct: 155 IVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLH 214

Query: 202 K--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               +   C P+V +YNT+I+G  R G    A NLF EM     + GVV  P+ VTY++ 
Sbjct: 215 TMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMM----QQGVV--PDVVTYSSY 268

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ID LCK   +DKA+ +  +M      PD VTY  +I G+     W E   +F EM  +G+
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD+ T +  M  LCK+GK  +A+   + M  +G  P+  TY+ L+ GY     +     
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF SME NG + D   YN LI+ Y K   ++EA+ ++++M  +G+ P   TY T+     
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNI 498
            + ++  A+  F++M    +  DT  YN+ I G C  G +++A EL   +        N 
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508

Query: 499 VSYNCLIDGL 508
           V +N +I+ L
Sbjct: 509 VFFNSIINSL 518



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 221/472 (46%), Gaps = 71/472 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+N +     +        +LF  +   G+ PD+ T+S  I+  CK   +    +V
Sbjct: 225 PNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELV 284

Query: 165 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 189
           L +++ + F P+ VT+  +I G                                   LC 
Sbjct: 285 LRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCK 344

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------ 243
             +  EAA  F        +PD+ TY+ L++G    G+ +  LNLF  M  GNG      
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM-EGNGIVADHS 403

Query: 244 --------------------------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
                                     E GV+  P+  TY T+I    + G +  A + F 
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVM--PDAWTYGTVIAAFSRMGRLADAMDKFN 461

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKN 336
           +M    + PD + Y S+I+GFC   +  +AK L  EMM +G+ +P+ V F+ I++ LCK 
Sbjct: 462 QMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKE 521

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++ +A  + +L+I  G  P+  T+N+LIDGY L  K++ A  +  +M S G   DVV+Y
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           + L++ YC+N  +++ L L+ EMLSKG+KPT +TY  +  GLF   +   A K+  EM  
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    D  T    + GLC++    EA+ LF+ +     + NI   N +ID +
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 6/404 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   FD M      P  V+   +L G  A+    D +L+LF  +   G+  D   ++IL
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD-MLNLFNSMEGNGIVADHSVYNIL 408

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ + K G +    ++  ++      P+A T+ ++I       R+ +A   F +      
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PD   YN+LI G C  G+ + A  L  EM +       + +PNTV +N+II+ LCKEG 
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG-----IPRPNTVFFNSIINSLCKEGR 523

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A+++F  +      PDV+T+ S+I G+       +A  +   M+  G++PDVVT+S 
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  C+NG++D    L   M+ +GV P T TY  ++ G     +   A+K+   M  +G
Sbjct: 584 LLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +   ++   C+N   +EA++L+ ++ +  +K  +   NT+   ++++ + E A 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAN 703

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +LFD +    +  +  TY   I  L K G V EA  +F  +  S
Sbjct: 704 ELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKS 747



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 187/376 (49%), Gaps = 7/376 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S +NIL     K    D  + +F ++   G+ PD +T+  +I  F +MGR++       +
Sbjct: 403 SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQ 462

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC-EPDVFTYNTLINGLCRTG 226
           ++     P+ + + SLI+G C    +++A  L ++        P+   +N++IN LC+ G
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             + A ++F+ + +  GE     +P+ +T+N++IDG    G ++KA  +   M    I P
Sbjct: 523 RVVEAQDIFDLVIH-IGE-----RPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DVVTY++++ G+C     ++   LF EM+ +GV+P  +T+ +I+  L  +G+   A ++ 
Sbjct: 577 DVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI  G   +  T   ++ G C  +  D A  LF  + +     ++   NT+I+   K 
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           +  EEA  L+  + + G+ P   TY  +   L +   VE A  +F  M ++  A  +   
Sbjct: 697 RKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 467 NNFIDGLCKSGFVLEA 482
           NN I  L + G + +A
Sbjct: 757 NNIIRVLLEKGEISKA 772


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/401 (33%), Positives = 211/401 (52%), Gaps = 11/401 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +IL    AKN         FKR +  GL   + + + L++   K+G +     V   ++R
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT-- 228
               P  ++F  +I GLC   ++ +A  +    +V     +V TYNTLI+G C+ G    
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216

Query: 229 -IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              A  + +EM A+G      +C PN VT+N +IDG CK+  V  A ++F +M  + + P
Sbjct: 217 MYKADAILKEMRADG------IC-PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VVTY S+I G C     NEA  L  +M++  ++P+++T + +++  CKN  + +A  L 
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  +G+ PN  TYN LID YC  + ++ A  L+  M   G   DV +YN LI   C+ 
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D+E A +L SEM +K +K  ++TYN L   L    ++++AL+L DEM R  +     TY
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  IDG CK G +  AL L   +       N+ +YN LI G
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKG 490



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 218/410 (53%), Gaps = 14/410 (3%)

Query: 95  DYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           DY L++      V+S N L   L K      +  ++K +    + P + + +I+IN  CK
Sbjct: 121 DYGLKLS-----VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI---MEAAALFTKHRVFACEPD 211
           +G+++    ++  +     + N +T+ +LI G C   +I    +A A+  + R     P+
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             T+N LI+G C+  +   A+ +F EM N  G      KPN VTYN++I+GLC  G V++
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEM-NRQG-----VKPNVVTYNSLINGLCNNGKVNE 289

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A  L  +M +  + P+++T+ +++ GFC      +A  LF +M  QG+ P+V T+++++D
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK+  M+ A  L  +M+ +GV P+  TYN LI G C    ++ AR L   M++     
Sbjct: 350 AYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+++YN LI+  C   ++++AL L  EM  KG+KP+ +TYNT+  G  +   +  AL L 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +M +    A+  TYN  I G CK   + +A  L   + +     N ++Y
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 197/390 (50%), Gaps = 10/390 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++  M+R    P  +S FNI+   L K    +    + + +   G+  ++ T++ LI+ +
Sbjct: 150 VYKEMIRRRIEPTLIS-FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208

Query: 153 CKMGRVSHGF---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           CKMG++   +    +L  +      PN VTF  LI G C +  +  A  +F +      +
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V TYN+LINGLC  G    A  L ++M N         KPN +T+N +++G CK   V
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNS------CLKPNIITHNALLNGFCKNKMV 322

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A ELF  M  + I P+V TY  +I  +C   +  +A  L+  M+ +GV PDV T++ +
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LC+ G ++ A  L+  M  + +  +  TYN LID  C   ++  A +L   M   G 
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
               ++YNT+I+ YCK  ++  AL+L S+M   G    V TYN L  G  +  ++E A  
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           L +EM    +  +  TY    + + + GFV
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 173/340 (50%), Gaps = 11/340 (3%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F  N++    L+       R       F +   +  +  V + N L++GL + G      
Sbjct: 89  FCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDME 148

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +++EM     E      P  +++N +I+GLCK G ++KA ++   MK   ++ +V+TY 
Sbjct: 149 FVYKEMIRRRIE------PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYN 202

Query: 293 SVIRGFCYANDWNE---AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           ++I G+C      +   A  +  EM   G+ P+ VTF++++D  CK+  +  A ++   M
Sbjct: 203 TLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM 262

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINWYCKNKD 408
             +GV PN  TYN+LI+G C   K++ A  L   M  N C+  +++++N L+N +CKNK 
Sbjct: 263 NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM-VNSCLKPNIITHNALLNGFCKNKM 321

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V++A  L+ +M  +GI P V TYN L     +   +E A  L+  M    V  D  TYN 
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I GLC+ G +  A  L   +     + ++++YN LID L
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 62/129 (48%)

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           ++ +S+  +    + +  + L+  Y KN         +      G+K +V + N L  GL
Sbjct: 79  QILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGL 138

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++ ++     ++ EM R  +     ++N  I+GLCK G + +A ++   ++      N+
Sbjct: 139 VKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANV 198

Query: 499 VSYNCLIDG 507
           ++YN LIDG
Sbjct: 199 ITYNTLIDG 207


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/420 (33%), Positives = 214/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+   + M + + SP  V+ +N +   L K         L   + S GL P+  T++IL
Sbjct: 226 DAVEFLNVMGKYNCSPDNVT-YNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  +CKMG +     V+  + ++   P+  T+  LI GLC E RI EA  L  +      
Sbjct: 285 VYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKL 344

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV +YNTLING         A  L EEM+    E GV  KPN VT+N ++   CKEG 
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGK 398

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A     KM++   +PD VTY ++I G+C A +  EA R   EM  + ++ D VT + 
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  LC+  K+++A +LL     RG   +  +Y TLI GY     +D A KL+  M+   
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            +   V+YN +I   C+    E+A+S  +E+L  G+ P   TYNT+  G      VE+A 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  ++M  N    D +T N  + GLC  G + +AL+LF         ++ V+YN LI  L
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL 638



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 229/455 (50%), Gaps = 18/455 (3%)

Query: 56  LRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG 115
           LRLT   +A L   +    +S GQ       P+ A  IF  M R+   P  ++  N L  
Sbjct: 128 LRLTSPSKALLDTAIGAYVQS-GQ-------PHHAFQIFKKMKRLRLRPNLLTC-NTLLN 178

Query: 116 CLAKNKHYDTVLSLFKRLNSA---GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
            L +     +V    +  N A   G+ P++ T +I+I  +C   +       L  + +  
Sbjct: 179 SLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN 238

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +P+ VT+ +++  LC + R+ +A  L    +     P+  TYN L+ G C+ G    A 
Sbjct: 239 CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           N+ E M   N        P+  TYN +I+GLC EG +++A +L  +M++  + PDVV+Y 
Sbjct: 299 NVIELMTQNN------LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYN 352

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G    +  +EA +L  EM ++GV+P+ VT ++++   CK GKMD AS  +  M   
Sbjct: 353 TLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEES 412

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G +P+  TYNTLI+GYC    +  A +    M       D V+ NT++   C+ K +EEA
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L S    +G     V+Y TL +G F+   V+RALKL+DEM+   +   T TYN  I G
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LC+ G   +A+     + +S    +  +YN ++ G
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 191/382 (50%), Gaps = 6/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L      +    L   + +  L PD+ +++ LIN   +  ++S  F +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNAVT   ++K  C E ++ +A+   TK       PD  TYNTLING C+
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A    +EM   N       K ++VT NTI+  LC+E  +++A +L    +    
Sbjct: 431 AGNMGEAFRTMDEMGRKN------MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V+Y ++I G+    + + A +L+ EM ++ + P  VT++ I+  LC+ GK ++A  
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  ++  G+ P+  TYNT++ GYC    ++ A +    M  N    DV + N L+   C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               +E+AL L++  +SKG     VTYNTL   L +  +++ A  L  EM    +  D Y
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 465 TYNNFIDGLCKSGFVLEALELF 486
           TYN  I  L  SG + EA E  
Sbjct: 665 TYNAIITALTDSGRIREAEEFM 686



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 174/405 (42%), Gaps = 53/405 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + + M      P  V+  NI+     K    D   +   ++  +G  PD  T++ 
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVT-HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +CK G +   F  +  + R     ++VT  ++++ LC E ++ EA  L +  R   
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK-------- 250
              D  +Y TLI G  + G+   AL L++EM            N   G +C+        
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+  TYNTI+ G C+EG V+KA +   KM + +  PDV T   ++RG 
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      +A +LF   + +G   D VT++ ++  LCK G++D A  LL  M  + + P+ 
Sbjct: 604 CMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDH 663

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD-----------------------VVS 395
           YTYN +I     + +I  A +    M   G + D                        V+
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVA 723

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           Y+  I   C     ++A+ ++ E   KGI     TY  L  GL +
Sbjct: 724 YSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 120/274 (43%), Gaps = 30/274 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL ++D M      P  V+ +N + G L +    +  +S    L  +GL PD  T++ 
Sbjct: 505 DRALKLWDEMKEKEIIPSTVT-YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++ +C+ G V   F    +++ + F P+  T   L++GLC E  + +A  LF       
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  TYNTLI  LC+ G    A NL  EM     E G    P+  TYN II  L   G
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHYTYNAIITALTDSG 677

Query: 268 FVDKAKELFLKMKDENINPD-----------------------VVTYTSVIRGFCYANDW 304
            + +A+E   KM ++   PD                        V Y+  I+  C    +
Sbjct: 678 RIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKY 737

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            +A R+F E   +G+  D  T+  +MD L K  K
Sbjct: 738 KDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG---YCLTDKIDHA 377
           P        +    ++G+   A ++ + M    + PN  T NTL++    Y  +  +  +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           R+ F      G + +V ++N +I  YC     ++A+   + M      P  VTYNT+   
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  ++  A  L  +M+   +  +  TYN  + G CK G++ EA  +   +  +    +
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 498 IVSYNCLIDGL 508
           + +YN LI+GL
Sbjct: 313 VWTYNMLINGL 323



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 3/165 (1%)

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN---W 402
           L L I R  +P+    +T I  Y  + +  HA ++F  M+      ++++ NTL+N    
Sbjct: 123 LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR 182

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           Y  +  V  +   +++ +  GI P V T+N +  G    ++ + A++  + M + + + D
Sbjct: 183 YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPD 242

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             TYN  +D LCK G + +A +L   ++      N  +YN L+ G
Sbjct: 243 NVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287



 Score = 45.8 bits (107), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 23/144 (15%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L   L K    D   +L   +    L PD YT++ +I      GR+      + ++
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 169 LRSCFTPNAV-----------------------TFTSLIKGLCAESRIMEAAALFTKHRV 205
           L     P+ V                        ++  IK LC E +  +A  +F + + 
Sbjct: 690 LEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749

Query: 206 FACEPDVFTYNTLINGLCRTGHTI 229
                D  TY  L++GL +   +I
Sbjct: 750 KGITVDKSTYINLMDGLIKRRKSI 773


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 212/397 (53%), Gaps = 7/397 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +   M+     P  V    ++ G   K  H  T    F  + S  + PD  T++ L
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHG-FFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  F + G+V     +   ++     P+ VT+T+LI   C    ++ A +L  +      
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++ TY  LI+GLC+ G    A  L +EM     +       N   YN++++G+CK G 
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL------NVCIYNSMVNGICKAGN 518

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A +L  +M+   I+PD +TYT+VI  +C   D ++A +L  EM+D+G+QP VVTF+V
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M+  C  G ++   RLL  M+ +G+ P+  TYNTL+  +C+ + ++   K++  M + G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D  +YN LI  +CK ++++EA  LY EM+ KG  PTV +YN L    ++  ++  A 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           +LF+EMR + + AD   YN F+D   + G V   L L
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 213/433 (49%), Gaps = 41/433 (9%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +S+NI+   L +         L  +++     PD+ ++S +I+ +C +G +     ++  
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +      PN  T+ S+I  LC   +  EA  +  +       PD   Y TLI+G  + GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A   F+EM +          P+ +TY T+I G  + G V + + LF +M    + PD
Sbjct: 379 VRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VTYT++I  +C A +   A  L  EM+  G+ P++VT+  ++D LCK+G++D A+ LL+
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G+  N   YN++++G C    I+ A KL   ME  G   D ++Y T+I+ YC+  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLG------------------------------ 437
           D+++A  L  EML +G++PTVVT+N L  G                              
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 438 -LFEIHQVERAL----KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L + H +  ++    K++  MR   VA D+ TYN  I G CK+  + EA  L++ + + 
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672

Query: 493 KYELNIVSYNCLI 505
            Y   + SYN LI
Sbjct: 673 GYVPTVTSYNALI 685



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 184/360 (51%), Gaps = 7/360 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD ML    SP  ++   ++ G     K  +   +LF  + S GL PD  T++ LI+ +C
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ-NLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K G + + F +   +++   TPN VT+ +LI GLC    +  A  L  + R    + +V 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            YN+++NG+C+ G+   A+ L +EM            P+ +TY T+ID  C+ G +DKA 
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAG------IDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L  +M D  + P VVT+  ++ GFC      +  RL   M+++G+ PD +T++ +M + 
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C    M+  +++ + M  +GV P++ TYN LI G+C    +  A  L+  M   G +  V
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            SYN LI  + K K + EA  L+ EM   G+      YN      +E   VE  L L DE
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 173/337 (51%), Gaps = 10/337 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI-VA 231
           + PN + F    + L     + EA  L  K   +     V + N  ++ +      I +A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           + +F        E+G+    NT +YN II  LC+ G V +A  L ++M   +  PDVV+Y
Sbjct: 246 IKVF-------CEYGISW--NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           ++VI G+C+  +  +A +L  +M  +G++P+  T++ I+  LCK GK  +A ++L  M+ 
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           + + P+   Y TLI G+     +  A K F  M S     D ++Y TLI  + +   V E
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             +L+ EM+S+G+KP  VTY TL     +  ++  A  L +EM +  +  +  TY   ID
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G +  A EL   +R    +LN+  YN +++G+
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 216/401 (53%), Gaps = 32/401 (7%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           + P+P    ++N +   L K         + + + S G+ PD   ++ LI+ FCK+G VS
Sbjct: 219 LKPNP---YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 275

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
             + +   + +   +P+ +T+T++I GLC   R+MEA  LF +      EPD  TY  LI
Sbjct: 276 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 335

Query: 220 NGLCRTGHTIVALNLFEEM---------------ANGNGEFGVV----------CKP--- 251
           +G C+ G    A +L  +M               A+G  + G V          C+    
Sbjct: 336 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 395

Query: 252 -NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            N  TYN++++GLCK G +D+A +L   M+    +PD VTYT+++  +C + +   A  L
Sbjct: 396 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 455

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M+D+ +QP VVTF+V+M+  C +G ++   +LL+ M+ +G+ PN  TYN+LI  YC+
Sbjct: 456 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 515

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
            + +    +++  M + G + D  +YN LI  +CK ++++EA  L+ +M+ KG   TV +
Sbjct: 516 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 575

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           YN L  G ++  +   A +LF++MRR  + AD   YN F D
Sbjct: 576 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 201/387 (51%), Gaps = 12/387 (3%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           + VL L + +   GL P+ YT++ +I   CK G+V+    VL  ++     P+ V +T+L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I G C    +  A  LF + +     PD  TY  +I GLC+TG  + A  LF EM     
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM----- 319

Query: 244 EFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
               VCK   P+ VTY  +IDG CKEG + +A  L  +M    + P++VTYT++  G C 
Sbjct: 320 ----VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
             + + A  L  EM  +G++ ++ T++ +++ LCK G +D+A +L++ M   G +P+  T
Sbjct: 376 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y TL+D YC + ++  A +L   M        VV++N L+N +C +  +E+   L   ML
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            KGI P   TYN+L       + +    +++  M    V  D  TYN  I G CK+  + 
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 555

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           EA  L R +    + L + SYN LI G
Sbjct: 556 EAWFLHRDMVGKGFNLTVSSYNALIKG 582



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 183/375 (48%), Gaps = 7/375 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M +   SP  ++   ++ G L +         LF  +    L PD  T++ LI+ +
Sbjct: 280 LFDEMQKRKISPDFITYTAVICG-LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G++   F +  ++L+   TPN VT+T+L  GLC    +  A  L  +      E ++
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +TYN+L+NGLC+ G+   A+ L ++M            P+ VTY T++D  CK   + +A
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH------PDAVTYTTLMDAYCKSREMVRA 452

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL  +M D  + P VVT+  ++ GFC +    + ++L   M+++G+ P+  T++ ++ +
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C    M   + +   M  +GV P+  TYN LI G+C    +  A  L   M   G    
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V SYN LI  + K K   EA  L+ +M  +G+      YN      ++  ++E  L+L D
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCD 632

Query: 453 EMRRNHVAADTYTYN 467
           E     +  D  T N
Sbjct: 633 EAIEKCLVGDIQTKN 647



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 78/143 (54%)

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +DG  +  K +   KL   M+  G   +  +YN +I   CK   V EA  +  EM+S+GI
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P  V Y TL  G  ++  V  A +LFDEM++  ++ D  TY   I GLC++G V+EA +
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           LF  +   + E + V+Y  LIDG
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDG 337



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 82/187 (43%), Gaps = 21/187 (11%)

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+ ++    K  K +R L    W  VNPN            L   +  ARKLF  M + G
Sbjct: 131 IVAQIATASKDLKMARKLIQDFW--VNPN------------LDVGVSFARKLFDKMLNYG 176

Query: 389 CMHDVVSYNTLINWYCKNKDV-------EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +  V S N  I+   ++ D        E  L L  EM  KG+KP   TYN + L L + 
Sbjct: 177 LLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 236

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +V  A ++  EM    +A D   Y   IDG CK G V  A  LF  ++  K   + ++Y
Sbjct: 237 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 296

Query: 502 NCLIDGL 508
             +I GL
Sbjct: 297 TAVICGL 303


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 215/421 (51%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA   F Y ++     P + + N L     K    +    L+  +    +   +YT +I
Sbjct: 168 DEAFECF-YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNI 226

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  CK G++      +G +  S   PN VT+ +++ G C+  R+  A A+ T  +   
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD FTY +LI+G+C+ G    A  +FEEM           +P+ V YNT+IDG C +G
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG------LRPSAVIYNTLIDGFCNKG 340

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A     +M  + I+P + TY S+I         +EA+ +  E+ ++G+ PD +T++
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  C+     KA  L + M+  G+ P   TY +L+      +++  A  LF  + S 
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV+ +N LI+ +C N +V+ A  L  +M    + P  VT+NT+  G     +VE A
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LFDEM+R  +  D  ++N  I G  + G + +A  +   + D+ +   +++YN L+ G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580

Query: 508 L 508
           L
Sbjct: 581 L 581



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 207/413 (50%), Gaps = 9/413 (2%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           + LR+  S   V +FNI+   L K             + ++G+ P+I T++ +++ +C  
Sbjct: 213 FRLRIKSS---VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           GRV     +L  + R    P++ T+ SLI G+C + R+ EA+ +F +       P    Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           NTLI+G C  G+  +A    +EM            P   TYN++I  L  E   D+A+ +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKG------ISPTMSTYNSLIHALFMEQRTDEAECM 383

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +++++ I+PD +TY  +I G+C   +  +A  L  EM+  G++P   T++ ++  L K
Sbjct: 384 IKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             +M +A  L + +   GV P+   +N LIDG+C    +  A +L   M+      D V+
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +NT++  +C+   VEEA  L+ EM  +GIKP  +++NTL  G      ++ A ++ +EM 
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                    TYN  + GLCK+     A EL + +       +  +Y  LI+G+
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 205/421 (48%), Gaps = 14/421 (3%)

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----GLFPDIYTHS 146
           LC+   ++   PSP P  + ++L   L      +++  +F+ L ++    G    I    
Sbjct: 100 LCLAIVIVARLPSPKP--ALHLLKQALGGGT-TNSIREIFEFLAASRDRLGFKSSIVFDY 156

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++ +C C M R    F     +      P   T  SL+      +R   A  L+ +    
Sbjct: 157 LIKSC-CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRL 215

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +  V+T+N +IN LC+ G    A +    M       GV  KPN VTYNTI+ G C  
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNTIVHGYCSS 269

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V+ A  +   MK + I PD  TY S+I G C      EA ++F EM+ +G++P  V +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  C  G +D AS   + M+ +G++P   TYN+LI    +  + D A  +   ++ 
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D ++YN LIN YC+  + ++A  L+ EML+ GIKPT  TY +L   L + ++++ 
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  LF ++    V  D   +N  IDG C +  V  A EL + +   K   + V++N ++ 
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 507 G 507
           G
Sbjct: 510 G 510



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 8/339 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   + K    +    +F+ +   GL P    ++ LI+ FC  G +      
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+   +P   T+ SLI  L  E R  EA  +  + +     PD  TYN LING CR
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             +   A  L +EM A+G        KP   TY +++  L K+  + +A +LF K+  E 
Sbjct: 409 CANAKKAFLLHDEMLASG-------IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PDV+ + ++I G C  ++   A  L  +M    V PD VTF+ IM   C+ GK+++A 
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M  RG+ P+  ++NTLI GY     I  A ++   M   G    V++YN L+   
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           CKN++ + A  L  EM+SKG+ P   TY TL  G+ +++
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 6/204 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L+K         LFK++ S G+ PD+   + LI+  C    V   F +
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFEL 488

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R    P+ VTF ++++G C E ++ EA  LF + +    +PD  ++NTLI+G  R
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSR 548

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  EM +          P  +TYN ++ GLCK    D A+EL  +M  + +
Sbjct: 549 RGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 285 NPDVVTYTSVIRGFCYANDWNEAK 308
            PD  TY ++I G    N  +E K
Sbjct: 603 TPDDTTYFTLIEGIAKVNIPDENK 626


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 201/420 (47%), Gaps = 10/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL ++  M+     PP   +F +    L +    D  L+L + +   G  PD   +  +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 216

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  G V+    +L  +L      +  TF  +++G+C   R+ EAA L  +     C
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V TY  L+ GLCR            +        G V + N V +NT+I G   EG 
Sbjct: 277 MPGVMTYGFLLQGLCRV----------RQADEARAMLGRVPELNVVLFNTVIGGCLAEGK 326

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A EL+  M  +   PD  TY+ ++ G C       A RL  EM  +G  P+VVT+++
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 386

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CKNG  D    LLE M  +G+  N+  YN +I   C   ++D A  L   M S G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+ SYNT+I   C N+ +EEA  ++  +L +G+    +TYNT+   L    + + A+
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L  EM  +  + D  +YN  I  +CK G V  +L L   + +   + N VSYN LI  L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 199/407 (48%), Gaps = 23/407 (5%)

Query: 112 ILFGCLAKNKHYDTVLS-------------LFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           +L GC A    +D V+              L  R+ + G  P + T+  L+   C++ + 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +LGR+       N V F ++I G  AE ++ EA  L+    +  C+PD  TY+ L
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++GLC+ G    A+ L  EM            PN VTY  ++   CK G  D  + L  +
Sbjct: 353 MHGLCKLGRIGSAVRLLREMEKKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  + +  +   Y  +I   C     +EA  L  EM  QG  PD+ +++ I+  LC N +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           M++A  + E ++  GV  N  TYNT+I       +   A +L   M  +GC  DVVSYN 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI   CK+ +V+ +L L  EM  KGIKP  V+YN L   L +  +V  AL+L  +M    
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A D  TYN  I+GLCK G++  AL L   + +     +I++YN LI
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 173/327 (52%), Gaps = 8/327 (2%)

Query: 110 FN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           FN ++ GCLA+ K  +    L++ +   G  PD +T+SIL++  CK+GR+     +L  +
Sbjct: 314 FNTVIGGCLAEGKLAEAT-ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +  F PN VT+T ++   C      +  AL  +        +   YN +I  LC+ G  
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L +EM +        C P+  +YNTII  LC    +++A+ +F  + +E +  + 
Sbjct: 433 DEAMGLIQEMRSQG------CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TY ++I        W +A RL  EM+  G   DVV+++ ++  +CK+G +D++  LLE 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+ PN  +YN LI   C   ++  A +L   M + G   D+V+YNTLIN  CK   
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLF 435
           +  AL+L  ++ ++ + P ++TYN L 
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILI 633



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+N L   + K+ + D  L L + +   G+ P+  +++ILI+  CK  RV     +  
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           ++L     P+ VT+ +LI GLC    +  A  L  K       PD+ TYN LI+  C+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+NIL   L K +     L L K++ + GL PDI T++ LIN  CKMG +     +L ++
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
                 P+ +T+  LI   C    + +AA L  +     C
Sbjct: 618 HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 180/341 (52%), Gaps = 6/341 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  P++Y  +IL++ FCK+G V +  +V   I R    P+ V+F +LI G C    + E 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L +        PDVFTY+ LINGLC+      A  LF+EM     E G+V  PN VT+
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC----EMGLV--PNGVTF 334

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            T+IDG CK G +D A   F  MKD  I PD++TY ++I G C   D  EA++L  EM+ 
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G +PD +TF+ +MD  CK+G MD A  + + M+  G+  +   +  LI G C   ++  
Sbjct: 395 NGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A ++   M S G   D  +Y  +I+ +CK  DV+    L  EM   G  P VVTYN L  
Sbjct: 455 AERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMN 514

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           G  +  Q++ A  L   M    V  +  T+N  +DG CK G
Sbjct: 515 GFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 180/334 (53%), Gaps = 6/334 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V  FNIL     K         +F  ++  GL P + + + LI+ +C+   V  GFV
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +     +P+  T+++LI GLC ESR+ EA  LF +       P+  T+ TLI+G C
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G   +AL  FE M +         +P+ +TYN +I+GLC++G + +A++L  +M    
Sbjct: 343 KHGKIDLALRNFEIMKDRG------IRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD +T+T+++ G C   D + A  +   M+++G++ D V F+ ++  LC++G++  A 
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R+L+ M+  G  P+  TY  +ID +C    +    KL   M+ +G +  VV+YN L+N +
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           CK   ++ A  L   ML+  + P  +T+N L  G
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 164/302 (54%), Gaps = 6/302 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN L     ++K+ +    L   + S  + PD++T+S LIN  CK  RV     +
Sbjct: 259 PSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL 318

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN VTFT+LI G C   +I  A   F   +     PD+ TYN LINGLCR
Sbjct: 319 FDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCR 378

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L  EM  GNG      KP+ +T+ T++DG CK+G +D A E+  +M +E I
Sbjct: 379 DGDLKEARKLLNEMI-GNG-----FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V +T++I G C      +A+R+  +M+  G +PD  T+++++D  CK G +   ++
Sbjct: 433 ELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAK 492

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G  P   TYN L++G+C   ++ +A+ L  +M +   + + +++N L++ +C
Sbjct: 493 LLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC 552

Query: 405 KN 406
           K+
Sbjct: 553 KH 554



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 177/340 (52%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L   + PN   F  L+ G C    +M A  +F +       P V ++NTLI+G CR+ +
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKN 276

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L   M +          P+  TY+ +I+GLCKE  V++A  LF +M +  + P+
Sbjct: 277 VEEGFVLKSVMESER------ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPN 330

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VT+T++I G C     + A R F  M D+G++PD++T++ +++ LC++G + +A +LL 
Sbjct: 331 GVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLN 390

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            MI  G  P+  T+ TL+DG C    +D A ++   M   G   D V++  LI+  C++ 
Sbjct: 391 EMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDG 450

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V +A  +  +MLS G KP   TY  +     +   V+   KL  EM+R+       TYN
Sbjct: 451 RVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYN 510

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++G CK G +  A  L  A+ + +   N +++N L+DG
Sbjct: 511 ALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 6/303 (1%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           +   P+V+ +N L++G C+ G  + A  +F+E++          +P+ V++NT+I G C+
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRG------LRPSVVSFNTLISGYCR 273

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              V++   L   M+ E I+PDV TY+++I G C  +   EA  LF EM + G+ P+ VT
Sbjct: 274 SKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVT 333

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D  CK+GK+D A R  E+M  RG+ P+  TYN LI+G C    +  ARKL   M 
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI 393

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            NG   D +++ TL++  CK+ D++ AL +   M+ +GI+   V +  L  GL    +V 
Sbjct: 394 GNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVR 453

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A ++  +M       D  TY   ID  CK G V    +L + ++       +V+YN L+
Sbjct: 454 DAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513

Query: 506 DGL 508
           +G 
Sbjct: 514 NGF 516



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 130/235 (55%)

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           E +L++ D    P+V  +  ++ GFC   D   A+ +F E+  +G++P VV+F+ ++   
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C++  +++   L  +M    ++P+ +TY+ LI+G C   +++ A  LF  M   G + + 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V++ TLI+  CK+  ++ AL  +  M  +GI+P ++TYN L  GL     ++ A KL +E
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M  N    D  T+   +DG CK G +  ALE+   + +   EL+ V++  LI GL
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%)

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           L  +  H  + ++ +   G   +V  +N L++ +CK  DV  A  ++ E+  +G++P+VV
Sbjct: 203 LNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVV 262

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           ++NTL  G      VE    L   M    ++ D +TY+  I+GLCK   V EA  LF  +
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322

Query: 490 RDSKYELNIVSYNCLIDG 507
            +     N V++  LIDG
Sbjct: 323 CEMGLVPNGVTFTTLIDG 340



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 7/140 (5%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +F  L   L ++        + K + SAG  PD  T++++I+CFCK G V  G  +L  +
Sbjct: 438 AFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            R    P  VT+ +L+ G C + ++  A  L          P+  T+N L++G C+ G +
Sbjct: 498 QRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSS 557

Query: 229 IVALNLFEEMANGNGEFGVV 248
            V   +F      NGE G+V
Sbjct: 558 -VDFKIF------NGEKGLV 570



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 1/155 (0%)

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK-NKDVEEAL 413
           N +   ++ LI  Y  ++ I+ A +    ++ N     V   + L+    K N+      
Sbjct: 152 NHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCW 211

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             Y E+L  G  P V  +N L  G  +I  V  A  +FDE+ R  +     ++N  I G 
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C+S  V E   L   +   +   ++ +Y+ LI+GL
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGL 306


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 216/401 (53%), Gaps = 32/401 (7%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           + P+P    ++N +   L K         + + + S G+ PD   ++ LI+ FCK+G VS
Sbjct: 319 LKPNP---YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
             + +   + +   +P+ +T+T++I GLC   R+MEA  LF +      EPD  TY  LI
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435

Query: 220 NGLCRTGHTIVALNLFEEM---------------ANGNGEFGVV----------CKP--- 251
           +G C+ G    A +L  +M               A+G  + G V          C+    
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495

Query: 252 -NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            N  TYN++++GLCK G +D+A +L   M+    +PD VTYT+++  +C + +   A  L
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 555

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M+D+ +QP VVTF+V+M+  C +G ++   +LL+ M+ +G+ PN  TYN+LI  YC+
Sbjct: 556 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 615

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
            + +    +++  M + G + D  +YN LI  +CK ++++EA  L+ +M+ KG   TV +
Sbjct: 616 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 675

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           YN L  G ++  +   A +LF++MRR  + AD   YN F D
Sbjct: 676 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +S+NI+   L +         L  ++   G  PD+ ++S +IN +C++G +     ++  
Sbjct: 254 ASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEE 313

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +      PN  T+  +I  LC   ++ EA  +  +       PD   Y TLI+G C+ G+
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  LF+EM            P+ +TY  +I GLC+ G V +A +LF +M  + + PD
Sbjct: 374 VSSAYRLFDEMQKRK------ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VTYT++I G+C      EA  L  +M+  G+ P++VT++ + D LCK G++D A+ LL 
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G+  N YTYN+L++G C    ID A KL   ME  G   D V+Y TL++ YCK++
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++  A  L  +ML + ++PTVVT+N L  G      +E   KL   M    +  +  TYN
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + I   C    +    E++R +       +  +YN LI G
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 132/406 (32%), Positives = 207/406 (50%), Gaps = 12/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ +     +      VL L + +   GL P+ YT++ +I   CK G+V+    V
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+ V +T+LI G C    +  A  LF + +     PD  TY  +I GLC+
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           TG  + A  LF EM         VCK   P+ VTY  +IDG CKEG + +A  L  +M  
Sbjct: 406 TGRVMEADKLFHEM---------VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 456

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             + P++VTYT++  G C   + + A  L  EM  +G++ ++ T++ +++ LCK G +D+
Sbjct: 457 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 516

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +L++ M   G +P+  TY TL+D YC + ++  A +L   M        VV++N L+N
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +C +  +E+   L   ML KGI P   TYN+L       + +    +++  M    V  
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TYN  I G CK+  + EA  L R +    + L + SYN LI G
Sbjct: 637 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 682



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 206/406 (50%), Gaps = 9/406 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK-MGRVSHG 161
           S P V  F+I F  L +    D    LF ++ + GL   + + ++ I+   + +  +   
Sbjct: 180 SDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIA 237

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             V           N  ++  +   LC   R++EA  L  +  +  C PDV +Y+T+ING
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G     L L EEM           KPN  TYN +I  LCK G V +A+ +  +M  
Sbjct: 298 YCQVGELQRVLKLIEEMQIKG------LKPNPYTYNGVILLLCKTGKVAEAERVLREMIS 351

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           E I PD V YT++I GFC   + + A RLF EM  + + PD +T++ ++  LC+ G++ +
Sbjct: 352 EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +L   M+ + + P+  TY  LIDGYC   K+  A  L   M   G   ++V+Y  L +
Sbjct: 412 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK  +V+ A  L  EM  KG++  + TYN+L  GL +   +++A+KL  +M       
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TY   +D  CKS  ++ A EL R + D + +  +V++N L++G
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577



 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 218/420 (51%), Gaps = 10/420 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKN-KHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +EA  +FD ML  +     V S N+    L+++       L +F      G+  +  +++
Sbjct: 199 DEARKLFDKMLN-YGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYN 257

Query: 147 ILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           I+ +  C++GRV     +L ++ LR C  P+ ++++++I G C    +     L  + ++
Sbjct: 258 IITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVINGYCQVGELQRVLKLIEEMQI 316

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              +P+ +TYN +I  LC+TG    A  +  EM +     G+   P+ V Y T+IDG CK
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE----GIA--PDGVIYTTLIDGFCK 370

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G V  A  LF +M+   I+PD +TYT+VI G C      EA +LF EM+ + ++PD VT
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++D  CK GKM +A  L   M+  G+ PN  TY  L DG C   ++D A +L   M 
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   ++ +YN+L+N  CK  ++++A+ L  +M   G  P  VTY TL     +  ++ 
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 550

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           RA +L  +M    +     T+N  ++G C SG + +  +L + + +     N  +YN LI
Sbjct: 551 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 610



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 183/375 (48%), Gaps = 7/375 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M +   SP  ++   ++ G L +         LF  +    L PD  T++ LI+ +
Sbjct: 380 LFDEMQKRKISPDFITYTAVICG-LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G++   F +  ++L+   TPN VT+T+L  GLC    +  A  L  +      E ++
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +TYN+L+NGLC+ G+   A+ L ++M            P+ VTY T++D  CK   + +A
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH------PDAVTYTTLMDAYCKSREMVRA 552

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            EL  +M D  + P VVT+  ++ GFC +    + ++L   M+++G+ P+  T++ ++ +
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C    M   + +   M  +GV P+  TYN LI G+C    +  A  L   M   G    
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V SYN LI  + K K   EA  L+ +M  +G+      YN      ++  ++E  L+L D
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCD 732

Query: 453 EMRRNHVAADTYTYN 467
           E     +  D  T N
Sbjct: 733 EAIEKCLVGDIQTKN 747


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/469 (32%), Positives = 225/469 (47%), Gaps = 53/469 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHY------DTVLSLFKRLNSAGLFP 140
           ++AL + D ML+     PP S + +I+F  L+K          + ++ L  +     +FP
Sbjct: 209 DDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFP 268

Query: 141 DIYTHSILINCFCKMGR------VSHGFVVLGRILR--SC-------------------- 172
           +    + LI+  C+ GR      V HG + LG ++   SC                    
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLL 328

Query: 173 -------FTPNAVTFTSLIKGLCAESRIMEAAALFTK-----HRVFACEPDVFTYNTLIN 220
                    PN VTF  LI  LC   R+ EA  +F K        F  EPDV TYNTLI+
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G     L L E M +        C PNTVTYN +IDG CK   ++ A+ELF +M 
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPR-----CMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            + + P+VVT  +++ G C     N A   F EM  +G++ + VT++ ++   C    ++
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA  L + M+  G +P+   Y TLI G     K+D A  +   M+  G   D+VS+N LI
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N +C+   ++EA  +  EM + GIKP  VTYNTL     +      A +L  +M +  + 
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRD-SKYELNIVSYNCLIDGL 508
               TY   I   C +G + EA+++FR +   SK   N V YN LI+ L
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/412 (33%), Positives = 202/412 (49%), Gaps = 42/412 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLN---SAGLF--PDIYTHSILINCFCKMGRVS 159
           P V +F IL   L K +  D  L +F+++N   S G    PD+ T++ LI+  CK+GR  
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 160 HGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            G  ++ R +RS   C  PN VT+  LI G C  S I  A  LF +       P+V T N
Sbjct: 398 EGLGLVER-MRSQPRCM-PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFG------------------------------ 246
           TL++G+C+ G    A+  F EM  G G  G                              
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEM-QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
             C P+ + Y T+I GL + G +D+A  +  KMK+   +PD+V++  +I GFC  N  +E
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  +  EM + G++PD VT++ ++    K G    A RL++ M+  G+ P   TY  LI 
Sbjct: 575 AYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIH 634

Query: 367 GYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            YCL   +D A K+F  M S   +  + V YN LIN  C+   V+ ALSL  +M  KG+K
Sbjct: 635 AYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVK 694

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           P   T+N +F GL E + + +A +L D M  +    D  T     + L   G
Sbjct: 695 PNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 228/474 (48%), Gaps = 65/474 (13%)

Query: 89  EALCIFDYMLRMHP-SPPPVSSFNI--LFGCLAKNKH-YDTVLSLFKRLNSAGLFPDIYT 144
           +AL  F+++    P    P+ SF +  +F   ++  + ++ +L LFK   S  +   +  
Sbjct: 102 KALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNA 161

Query: 145 HSILINCFCKMGRVSHGFVVL-----------------------GRI------------L 169
            ++LI CF +   V   F+V                        GR+             
Sbjct: 162 ATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQP 221

Query: 170 RSCFTPNA----VTFTSLIK-----GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           ++ F PN+    + F++L K         E  I+   + F +H VF   P+      LI+
Sbjct: 222 KAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVF---PNSIWLTQLIS 278

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LCR+G T  A ++     +G  + G V +    + N ++  L +     +   L  +MK
Sbjct: 279 RLCRSGRTDRAWDVL----HGLMKLGGVME--AASCNALLTALGRAREFKRMNTLLAEMK 332

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG------VQPDVVTFSVIMDELC 334
           + +I P+VVT+  +I   C     +EA  +F E M+ G      V+PDV+T++ ++D LC
Sbjct: 333 EMDIQPNVVTFGILINHLCKFRRVDEALEVF-EKMNGGESNGFLVEPDVITYNTLIDGLC 391

Query: 335 KNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           K G+ ++   L+E M  +    PNT TYN LIDGYC    I+ AR+LF  M  +G   +V
Sbjct: 392 KVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNV 451

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+ NTL++  CK+  +  A+  ++EM  KG+K   VTY  L      ++ +E+A++LFDE
Sbjct: 452 VTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDE 511

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           M     + D   Y   I GL ++G +  A  +   ++++ +  +IVS+N LI+G
Sbjct: 512 MLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 153/311 (49%), Gaps = 8/311 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M +    PP V + N L   + K+   +  +  F  +   GL  +  T++ LI  F
Sbjct: 438 LFDQMNK-DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C +  +     +   +L +  +P+A+ + +LI GL    ++  A+ + +K +     PD+
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            ++N LING CR      A  + +EM N         KP+ VTYNT+I    K G    A
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAG------IKPDGVTYNTLISHFSKTGDFSTA 610

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMD 331
             L  KM  E + P VVTY ++I  +C   + +EA ++F +M     V P+ V ++++++
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LC+  ++D A  L++ M  +GV PNT T+N +  G    + +  A +L   M  + C  
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730

Query: 392 DVVSYNTLINW 402
           D ++   L  W
Sbjct: 731 DYITMEILTEW 741



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 6/253 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +FD ML    SP  +  + ++ G L++    D    +  ++  AG  PDI + ++L
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISG-LSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN FC+  ++   + +L  +  +   P+ VT+ +LI           A  L  K      
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V TY  LI+  C  G+   A+ +F +M++ +        PNTV YN +I+ LC++  
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK-----VPPNTVIYNILINSLCRKNQ 677

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A  L   MK + + P+  T+ ++ +G    N  ++A  L   M +    PD +T  +
Sbjct: 678 VDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEI 737

Query: 329 IMDELCKNGKMDK 341
           + + L   G+  K
Sbjct: 738 LTEWLSAVGETAK 750


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/344 (34%), Positives = 185/344 (53%), Gaps = 6/344 (1%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           +++ L+    K GR  H +     +L +   PN  T+  L++ LC   R  EA ++F   
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C P+VF+Y+ LI GLCR      A  L  EM +G  +      PN VTY +++ GL
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVVTYGSLLSGL 132

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G + +A +LF +M      PD V Y  +I GF    D  EA RLF EM+++G  P V
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++    + G+  +   L + M+ +G  PN +T+N L+DG+C    +  A +LF+ 
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S GC  DVVSYNTL+   C      EA  L  EM+  G+ P +V+YN L  G  +   
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           ++ A+KLF E+ ++ +  D ++Y+  ID LC++G V  A  +F+
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 200/394 (50%), Gaps = 6/394 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L + + ++   S+F+ + + G  P+++++SILI   C+  +V     +
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN VT+ SL+ GLC   ++ EA  LF++     C PD   YN LI+G  +
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  LFEEM          C P   TYN+++ G  ++G   + + LF  M  +  
Sbjct: 170 KGDMGEAYRLFEEMLEKG------CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++ T+ +++ GFC   D  EA RLF+EM   G  PDVV+++ +M  +C  GK  +A R
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQR 283

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  MI  GV P+  +YN LIDGY  +  +DHA KLF  +  +G   D  SY+T+I+  C
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   V  A  ++ +M++ G  P       L +GL    ++  + +LF  M +        
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            YN  +  LCK+    +  E+F  + +  +  ++
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 203/397 (51%), Gaps = 6/397 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+N L   LAK+   D V   +  +  AG  P+ YT+  L+   C+  R      V   +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                +PN  +++ LI GLC   ++ EAA L  +      +P+V TY +L++GLC+ G  
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A++LF  M          C P+ V YN +IDG  K+G + +A  LF +M ++   P V
Sbjct: 139 KEAVDLFSRMVYRG------CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY S++ GF    ++   + LF +M+ QG  P++ TF+ ++D  CK G M +A RL   
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G  P+  +YNTL+ G C   K   A++L   M  +G   D+VSYN LI+ Y K+  
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A+ L+ E+   G++P   +Y+T+   L    +V  A  +F +M  N  A D      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + GLC+   + E+ ELF+A+   +    I  YN L+
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 173/336 (51%), Gaps = 6/336 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           +    +++  L++ L    R       +       C P+ +TY  L+  LC+      A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           ++F  MA         C PN  +Y+ +I GLC+   VD+A EL  +M D    P+VVTY 
Sbjct: 73  SVFRGMAAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S++ G C      EA  LF  M+ +G  PD V ++V++D   K G M +A RL E M+ +
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G  P  +TYN+L+ G+    +    + LF  M   GC+ ++ ++N L++ +CK  D+ EA
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+ EM S G  P VV+YNTL  G+    +   A +L  EM R+ V  D  +YN  IDG
Sbjct: 247 HRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDG 306

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             KSG +  A++LF  I  S  E +  SY+ +ID L
Sbjct: 307 YSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 7/325 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F  M+     PP    +N+L    +K         LF+ +   G  P ++T++ 
Sbjct: 139 KEAVDLFSRMV-YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F + G       +   +LR    PN  TF +L+ G C    ++EA  LF + R   
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV +YNTL+ G+C  G    A  L  EM            P+ V+YN +IDG  K G
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG------VGPDIVSYNILIDGYSKSG 311

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +LF ++    + PD  +Y+++I   C A     A  +F +M+  G  PD     
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC+  ++ ++  L + M+     P    YN L+   C   + D   ++F  +   
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEA 412
           G   DV     ++    ++ D E A
Sbjct: 432 GFSPDVEISKVILETLRRSDDKEAA 456


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 211/397 (53%), Gaps = 7/397 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +   M+     P  V    ++ G   K  H  T    F  + S  + PD  T++ L
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHG-FFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  F + G+V     +   ++     P+ VT+T+LI   C    ++ A +L  +      
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P++ TY  LI+GLC+ G    A  L +EM     +       N   YN++++G+CK G 
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL------NVCIYNSMVNGICKAGN 518

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A +L  +M+   I+PD +TYT+VI  +C   D ++A +L  EM+D+G+QP VVTF+V
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M+  C  G ++   RLL  M+ +G+ P+  TYNTL+  +C+ + ++   K++  M + G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D  +YN LI  +CK ++++EA  LY EM+ KG  PTV +YN L    ++  +   A 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           +LF+EMR + + AD   YN F+D   + G V   L L
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 199/403 (49%), Gaps = 6/403 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V S++ +             L L   +   GL P+ YT++ +I   CK+G+     
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            VL  ++     P+ V +T+LI G      +  A   F +       PD  TY TLI G 
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            + G  I   NLF EM +         KP+ VTY T+ID  CK G +  A  L  +M   
Sbjct: 409 GQGGKVIEPQNLFHEMISRG------LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P++VTY ++I G C   + + A  L  EM  +G+Q +V  ++ +++ +CK G +++A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +L++ M   G++P+  TY T+ID YC    ID A KL   M   G    VV++N L+N 
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C    +E+   L   ML KGI P  +TYNTL       + +    K++  MR   VA D
Sbjct: 583 FCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD 642

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           + TYN  I G CK+  + EA  L++ + +  Y   + SYN LI
Sbjct: 643 SNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 183/360 (50%), Gaps = 7/360 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD ML    SP  ++   ++ G     K  +   +LF  + S GL PD  T++ LI+ +C
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ-NLFHEMISRGLKPDEVTYTTLIDVYC 444

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K G + + F +   +++   TPN VT+ +LI GLC    +  A  L  + R    + +V 
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            YN+++NG+C+ G+   A+ L +EM            P+ +TY T+ID  C+ G +DKA 
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAG------IDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L  +M D  + P VVT+  ++ GFC      +  RL   M+++G+ PD +T++ +M + 
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C    M+  +++ + M  +GV P++ TYN LI G+C    +  A  L+  M   G +  V
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            SYN LI  + K +   EA  L+ EM   G+      YN      +E   VE  L L DE
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 173/337 (51%), Gaps = 10/337 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI-VA 231
           + PN + F    + L     + EA  L  K   +     V + N  ++ +      I +A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           + +F        E+G+    NT +YN II  LC+ G V +A  L ++M   +  PDVV+Y
Sbjct: 246 IKVF-------CEYGISW--NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           ++VI G+C+  +  +A +L  +M  +G++P+  T++ I+  LCK GK  +A ++L  M+ 
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           + + P+   Y TLI G+     +  A K F  M S     D ++Y TLI  + +   V E
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIE 416

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
             +L+ EM+S+G+KP  VTY TL     +  ++  A  L +EM +  +  +  TY   ID
Sbjct: 417 PQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID 476

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G +  A EL   +R    +LN+  YN +++G+
Sbjct: 477 GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 235/519 (45%), Gaps = 93/519 (17%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT----- 125
           +ER +S   G      P++A  +FD +L    +P P    N L   LA+           
Sbjct: 114 RERLRSGTLG------PDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVP 167

Query: 126 --VLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
              + LFKR++        P IYT++ILINC+ +  R   G  V GR+LR+   P+  ++
Sbjct: 168 ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 227

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            +LI G   E  + +A  LF K       P+V TY++LINGLC+T     A  +  +M  
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV- 286

Query: 241 GNGEFGVVCKPNTVTYNTIIDG-----------------------------------LCK 265
                G   +PN +TYN +I G                                   LCK
Sbjct: 287 -----GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 341

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G + +A+++F  M  +   PDV++Y +++ G+  A        LF  M+ +GV PD   
Sbjct: 342 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 401

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ +++   + G MDK+  + E M  +GVNP+  T++T+I  +C   ++D A + F  M 
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI--------------------- 424
             G   D   Y+ LI   C  +D+ +A  L S+MLSKGI                     
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 521

Query: 425 ---------------KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
                          +P ++T+N+L  G   +  ++ A+ L D M    V  D YTYN  
Sbjct: 522 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 581

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +DG CK G + +AL LFR +   +  L  VSYN ++ GL
Sbjct: 582 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 620



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 229/487 (47%), Gaps = 66/487 (13%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+  L +F  +LR    P  V S+N L    +K    D    LF ++   G+ P++ T+S
Sbjct: 205 PDLGLPVFGRLLRTGLGPD-VFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYS 263

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG-------------------- 186
            LIN  CK   +     VL +++ +   PN +T+  LI G                    
Sbjct: 264 SLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSS 323

Query: 187 ---------------LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
                          LC   RI EA  +F    +   +PDV +Y  L++G    G     
Sbjct: 324 LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGM 383

Query: 232 LNLFEEMA---------------NGNGEFGVVCK--------------PNTVTYNTIIDG 262
            NLF  M                N     G++ K              P+ +T++T+I  
Sbjct: 384 DNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISA 443

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            C+ G +D A E F  M D  + PD   Y+ +I+G C   D  +AK L  +M+ +G+ P 
Sbjct: 444 FCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP 503

Query: 323 VVTF-SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
            + F + I++ LCK G++ +   +++L+I  G  PN  T+N+L+DGYCL   +  A  L 
Sbjct: 504 CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 563

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            SMES G   D+ +YNTL++ YCK+  +++AL+L+ +ML K +  T V+YN +  GLF+ 
Sbjct: 564 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 623

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +   A ++F EM  + +A   +TY   + GLC++    EA  L   +     + +I+++
Sbjct: 624 RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 683

Query: 502 NCLIDGL 508
           N +I  +
Sbjct: 684 NIVIRAM 690



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 210/459 (45%), Gaps = 32/459 (6%)

Query: 47  TTTSKLKESLR--------LTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           +T+   KES+R        L V D  +   F+   CK    G I      EA  IFD M+
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK---HGRIK-----EARDIFDSMV 356

Query: 99  RMHPSPPPVSSFNILFG-----CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
              P P  +S   +L G     C+A   +      LF  +   G+ PD +  + LIN + 
Sbjct: 357 LKGPKPDVISYGALLHGYATAGCIAGMDN------LFNVMVCEGVVPDRHVFNTLINAYA 410

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           ++G +    ++   + +    P+ +TF+++I   C   R+ +A   F         PD  
Sbjct: 411 RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTA 470

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y+ LI G C     + A  L  +M +       +  P    + +II+ LCKEG V + K
Sbjct: 471 VYSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKEGRVAEGK 525

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           ++   +      P+++T+ S++ G+C   +  EA  L   M   GV+PD+ T++ ++D  
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK+G++D A  L   M+ + V   + +YN ++ G     +   A+++F  M  +G    +
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 645

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +Y T++   C+N   +EA  L  ++ S  +K  ++T+N +   +F++ + + A +LF  
Sbjct: 646 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 705

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +    +     TY   I  L K     +A  LF ++  S
Sbjct: 706 ISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 744



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 154/361 (42%), Gaps = 31/361 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD-IYTHS 146
           ++A+  F++M+     PP  + ++ L       +       L   + S G+ P  I   +
Sbjct: 451 DDAMEKFNHMIDTG-VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 509

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +IN  CK GRV+ G  V+  I+ +   PN +TF SL+ G C    + EA  L       
Sbjct: 510 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 569

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFG----VVC 249
             EPD++TYNTL++G C+ G    AL LF +M +              +G F     +V 
Sbjct: 570 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 629

Query: 250 KP------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           K             +  TY T++ GLC+    D+A  L  K+   N+  D++T+  VIR 
Sbjct: 630 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 689

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
                   EAK LF  +   G+ P ++T+ V++  L K    + A  L   M      P+
Sbjct: 690 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 749

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           +   N +I       ++  A      ++  G + +  + + LI  +  N    E + L  
Sbjct: 750 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLP 809

Query: 418 E 418
           E
Sbjct: 810 E 810


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 235/519 (45%), Gaps = 93/519 (17%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT----- 125
           +ER +S   G      P++A  +FD +L    +P P    N L   LA+           
Sbjct: 43  RERLRSGTLG------PDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVP 96

Query: 126 --VLSLFKRLNSAG---LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
              + LFKR++        P IYT++ILINC+ +  R   G  V GR+LR+   P+  ++
Sbjct: 97  ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 156

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            +LI G   E  + +A  LF K       P+V TY++LINGLC+T     A  +  +M  
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV- 215

Query: 241 GNGEFGVVCKPNTVTYNTIIDG-----------------------------------LCK 265
                G   +PN +TYN +I G                                   LCK
Sbjct: 216 -----GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G + +A+++F  M  +   PDV++Y +++ G+  A        LF  M+ +GV PD   
Sbjct: 271 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 330

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ +++   + G MDK+  + E M  +GVNP+  T++T+I  +C   ++D A + F  M 
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI--------------------- 424
             G   D   Y+ LI   C  +D+ +A  L S+MLSKGI                     
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 450

Query: 425 ---------------KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
                          +P ++T+N+L  G   +  ++ A+ L D M    V  D YTYN  
Sbjct: 451 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 510

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +DG CK G + +AL LFR +   +  L  VSYN ++ GL
Sbjct: 511 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 549



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 229/487 (47%), Gaps = 66/487 (13%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+  L +F  +LR    P  V S+N L    +K    D    LF ++   G+ P++ T+S
Sbjct: 134 PDLGLPVFGRLLRTGLGPD-VFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYS 192

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG-------------------- 186
            LIN  CK   +     VL +++ +   PN +T+  LI G                    
Sbjct: 193 SLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSS 252

Query: 187 ---------------LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
                          LC   RI EA  +F    +   +PDV +Y  L++G    G     
Sbjct: 253 LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGM 312

Query: 232 LNLFEEMA---------------NGNGEFGVVCK--------------PNTVTYNTIIDG 262
            NLF  M                N     G++ K              P+ +T++T+I  
Sbjct: 313 DNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISA 372

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            C+ G +D A E F  M D  + PD   Y+ +I+G C   D  +AK L  +M+ +G+ P 
Sbjct: 373 FCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPP 432

Query: 323 VVTF-SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
            + F + I++ LCK G++ +   +++L+I  G  PN  T+N+L+DGYCL   +  A  L 
Sbjct: 433 CIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 492

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            SMES G   D+ +YNTL++ YCK+  +++AL+L+ +ML K +  T V+YN +  GLF+ 
Sbjct: 493 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 552

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +   A ++F EM  + +A   +TY   + GLC++    EA  L   +     + +I+++
Sbjct: 553 RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 612

Query: 502 NCLIDGL 508
           N +I  +
Sbjct: 613 NIVIRAM 619



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 210/459 (45%), Gaps = 32/459 (6%)

Query: 47  TTTSKLKESLR--------LTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYML 98
           +T+   KES+R        L V D  +   F+   CK    G I      EA  IFD M+
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK---HGRIK-----EARDIFDSMV 285

Query: 99  RMHPSPPPVSSFNILFG-----CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
              P P  +S   +L G     C+A   +      LF  +   G+ PD +  + LIN + 
Sbjct: 286 LKGPKPDVISYGALLHGYATAGCIAGMDN------LFNVMVCEGVVPDRHVFNTLINAYA 339

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           ++G +    ++   + +    P+ +TF+++I   C   R+ +A   F         PD  
Sbjct: 340 RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTA 399

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y+ LI G C     + A  L  +M +       +  P    + +II+ LCKEG V + K
Sbjct: 400 VYSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKEGRVAEGK 454

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           ++   +      P+++T+ S++ G+C   +  EA  L   M   GV+PD+ T++ ++D  
Sbjct: 455 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 514

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK+G++D A  L   M+ + V   + +YN ++ G     +   A+++F  M  +G    +
Sbjct: 515 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 574

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +Y T++   C+N   +EA  L  ++ S  +K  ++T+N +   +F++ + + A +LF  
Sbjct: 575 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 634

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +    +     TY   I  L K     +A  LF ++  S
Sbjct: 635 ISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 673



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 154/361 (42%), Gaps = 31/361 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD-IYTHS 146
           ++A+  F++M+     PP  + ++ L       +       L   + S G+ P  I   +
Sbjct: 380 DDAMEKFNHMIDTG-VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 438

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +IN  CK GRV+ G  V+  I+ +   PN +TF SL+ G C    + EA  L       
Sbjct: 439 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 498

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFG----VVC 249
             EPD++TYNTL++G C+ G    AL LF +M +              +G F     +V 
Sbjct: 499 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 558

Query: 250 KP------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           K             +  TY T++ GLC+    D+A  L  K+   N+  D++T+  VIR 
Sbjct: 559 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 618

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
                   EAK LF  +   G+ P ++T+ V++  L K    + A  L   M      P+
Sbjct: 619 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 678

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           +   N +I       ++  A      ++  G + +  + + LI  +  N    E + L  
Sbjct: 679 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLP 738

Query: 418 E 418
           E
Sbjct: 739 E 739


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 207/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L   L  +  ++    ++K+L   G   D + +++LI  F + G++     +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T+  L+  L    R+ EA + F         P++ TYN L++   +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G   +AL LF EM           +P+ VTYN ++D LC  G V  A++LF KM  +  
Sbjct: 183 VGQLDMALGLFAEMKRRG------FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD  TY++++ G   +    EA ++F EM+D+GV  D+V ++ ++  L K G MD+  +
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ M  +G +P+ +++NT++D     +K D AR++F  M  +GC  D++SYN LI+ Y 
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +  D  +A  +  EM+  G  P   TYN+L   L    QV+ A  + +EM       D  
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  +D L K G    A  LF+ ++D   E + +SY   IDGL
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 201/397 (50%), Gaps = 6/397 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N+L     ++   D+ + +F+ +   G  PD YT+  L+N   K GRV         +
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L    TPN  T+  L+       ++  A  LF + +    +P V TYN L++ LC  G  
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LF +M  G+G     C P++ TY+T+++GL K G V++A ++F +M D  +  D+
Sbjct: 222 GAARKLFHKM-TGDG-----CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V Y S++     A + +   +L  EM  +G  PD  +F+ IMD L K  K D A  +   
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G  P+  +YN LID Y        AR++   M   G + +  +YN+LI+W   +  
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V+EA ++  EM + G +P VVTYN L   L +  + +RA +LF +M+   V  DT +Y  
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            IDGL     + EAL LF+ ++     ++   Y  LI
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 201/390 (51%), Gaps = 7/390 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+ +F  M ++  S P   ++  L   L K        S F  +   GL P+I T+++
Sbjct: 117 DSAMEMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNL 175

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F K+G++     +   + R  F P+ VT+  L+  LC+  R+  A  LF K     
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD +TY+TL+NGL ++G    A  +F EM +     GV    + V YN+++  L K G
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR----GVAV--DLVNYNSLLATLAKAG 289

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+  +L  +M  +  +PD  ++ +++     AN  + A+ +F  M++ G +PD+++++
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D   + G   +A ++LE M+  G  P T TYN+LI       ++D A  +   ME+ 
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  DVV+YN L++   K  + + A  L+ +M  KG++P  ++Y     GL    +++ A
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           L LF +M+      D   Y   I    ++G
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 41/328 (12%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           T   LI    R   +  A +LF +  +        C P    +  +ID L   G  ++A+
Sbjct: 32  TLVKLITAYGRGNKSGDAFDLFNQAES------FACSPTVHAFTKLIDILVNSGEFERAE 85

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            ++ K+  +    D   Y  +IR F  +   + A  +F EM  +G +PD  T+  +++ L
Sbjct: 86  LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145

Query: 334 CKNGKMDKASRLLELMIWRGVNPN--TY-------------------------------- 359
            K G++ +A    + M+ RG+ PN  TY                                
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSV 205

Query: 360 -TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN L+D  C   ++  ARKLF  M  +GC  D  +Y+TL+N   K+  VEEA  ++ E
Sbjct: 206 VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE 265

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ +G+   +V YN+L   L +   ++R  KL  EM R     D +++N  +D L K+  
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLID 506
              A E+F  + +S  + +++SYN LID
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILID 353



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 140/260 (53%), Gaps = 2/260 (0%)

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           G   +PNT+    +I    +      A +LF + +    +P V  +T +I     + ++ 
Sbjct: 25  GRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFE 82

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
            A+ ++ +++ +G Q D   ++V++    ++G++D A  +   M  +G  P+ YTY  L+
Sbjct: 83  RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLV 142

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +      ++  AR  F +M   G   ++ +YN L++ + K   ++ AL L++EM  +G +
Sbjct: 143 NALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ 202

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P+VVTYN L   L    +V  A KLF +M  +  + D+YTY+  ++GL KSG V EA ++
Sbjct: 203 PSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 486 FRAIRDSKYELNIVSYNCLI 505
           FR + D    +++V+YN L+
Sbjct: 263 FREMVDRGVAVDLVNYNSLL 282



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%)

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L   G +D  + L  +M  E       T   +I  +   N   +A  LF +       P 
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT 64

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           V  F+ ++D L  +G+ ++A  + + ++ +G   + + YN LI  +  + ++D A ++F 
Sbjct: 65  VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M+  G   D  +Y  L+N   K   V+EA S +  ML +G+ P + TYN L     ++ 
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           Q++ AL LF EM+R        TYN  +D LC +G V  A +LF  +       +  +Y+
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244

Query: 503 CLIDGL 508
            L++GL
Sbjct: 245 TLVNGL 250


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 210/401 (52%), Gaps = 5/401 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M+      P   SF  L     ++   + V +L   +   G   D  T ++++  F
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ GR      +  R+L     PN V +T+ I GLC  + + +A  +  +      +P+V
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +T+ +LINGLC+ G T  A  LF ++   +       KPN  TY  +I G CKEG + +A
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSY-----KPNVHTYTVMIGGYCKEGKLARA 345

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           + L  +M ++ + P+  TYT++I G C    +N A  L  +M  +G QP++ T++ ++D 
Sbjct: 346 EMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDG 405

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK GK+ +A ++L +   +G+  +  TY  +I  +C    I +A  LF  M  NGC  D
Sbjct: 406 LCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPD 465

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y TLI  YC+ + +EE+  L+ + L+  + PT  TY ++  G  ++ +   AL++F+
Sbjct: 466 IHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFE 525

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
            M +N   AD+ TY   I GLCK   + EA  L+  + D +
Sbjct: 526 RMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKR 566



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 201/425 (47%), Gaps = 12/425 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTH 145
           P  A  +F+  +R H  P  V + N +         +     +F  +    GL PD  + 
Sbjct: 131 PEAADMVFE--MRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSF 188

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
             LI   C+ GR+     +L  +    F  +  T T +++  C + R  + + LF +   
Sbjct: 189 RALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLE 248

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLC 264
               P+V  Y   I+GLC+  +   A  + EEM A G        KPN  T+ ++I+GLC
Sbjct: 249 MGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKG-------LKPNVYTHTSLINGLC 301

Query: 265 KEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           K G+ ++A  LFLK+ K  +  P+V TYT +I G+C       A+ L   M++QG+ P+ 
Sbjct: 302 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 361

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++   CK G  + A  L+  M   G  PN YTYN LIDG C   KI  A K+   
Sbjct: 362 NTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRM 421

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
             + G   D V+Y  +I  +CK   +  AL L++ M   G  P + TY TL     +  Q
Sbjct: 422 ANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQ 481

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +E + KLFD+     +     TY + I G CK G    AL +F  +  +  + + ++Y  
Sbjct: 482 MEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGA 541

Query: 504 LIDGL 508
           LI GL
Sbjct: 542 LISGL 546



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 203/421 (48%), Gaps = 23/421 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  ML M  +PP V ++      L K  +      + + + + GL P++YTH+ LIN  
Sbjct: 242 LFRRMLEM-GTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGL 300

Query: 153 CKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           CK+G     F +  ++++S  + PN  T+T +I G C E ++  A  L  +       P+
Sbjct: 301 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 360

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             TY TLI+G C+ G    A  L  +M     +      PN  TYN +IDGLCK+G + +
Sbjct: 361 TNTYTTLISGHCKEGSFNCAFELMNKMRREGFQ------PNIYTYNALIDGLCKKGKIQE 414

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ++     ++ +  D VTYT +I   C       A  LF  M + G  PD+ T++ ++ 
Sbjct: 415 AYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIA 474

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             C+  +M+++ +L +  +   + P   TY ++I GYC   K   A ++F  M  NGC  
Sbjct: 475 RYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQA 534

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA---- 447
           D ++Y  LI+  CK   +EEA +LY  ML K + P  VT  TL    FE  + E+A    
Sbjct: 535 DSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL---AFEYCRREKAVVAV 591

Query: 448 --LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L   D+ R+NH      T N  +  L   G V +A    +   D    ++ ++Y   I
Sbjct: 592 SILDRLDKRRKNH------TVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFI 645

Query: 506 D 506
           +
Sbjct: 646 N 646



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 9/325 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             A  +F  +++     P V ++ ++ G   K         L  R+   GL P+  T++ 
Sbjct: 307 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 366

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G  +  F ++ ++ R  F PN  T+ +LI GLC + +I EA  +        
Sbjct: 367 LISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  TY  +I   C+ GH   AL+LF  MA  NG     C P+  TY T+I   C++ 
Sbjct: 427 LQLDKVTYTVMITEHCKQGHITYALDLFNRMAE-NG-----CHPDIHTYTTLIARYCQQR 480

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++++++LF K     + P   TYTS+I G+C       A R+F  M+  G Q D +T+ 
Sbjct: 481 QMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYG 540

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK  ++++A  L E M+ + + P   T  TL   YC  +K   A  +   ++  
Sbjct: 541 ALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKR 600

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEA 412
              H V   N L+        VE+A
Sbjct: 601 RKNHTV---NVLVRKLSAIGHVEDA 622


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/454 (33%), Positives = 222/454 (48%), Gaps = 43/454 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F+ ML M    P   ++N+L     K+        L   + +  L P  +T+S+L
Sbjct: 399 KAMSLFNEML-MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C    +     VL +++R+   PN   + +LIK    ESR   A  L         
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+F YN LI GLCR      A  L  +M    GE G+  KPN  TY   I+   K G 
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDM----GEKGI--KPNAHTYGAFINLYSKSGE 571

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A+  F  M    I P+ V YT +I+G C   +  EA   F  M+++G+ PD+  +S 
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 329 IMDELCKNGK-----------------------------------MDKASRLLELMIWRG 353
           I+  L KNGK                                   ++KAS+L + M+  G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           +NPN   YNTLI+G C   ++  AR+LF  +E    + DVV+Y+T+I+ YCK+ ++ EA 
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+ EM+SKGI P    Y  L  G  +   +E+AL LF E ++  V + +  +N+ ID  
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSF 810

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G V+EA ELF  + D K   NIV+Y  LID 
Sbjct: 811 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/420 (31%), Positives = 216/420 (51%), Gaps = 9/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL I D M+        V ++N + G +AK       +SLF  +  AGL PD +T+++L
Sbjct: 364 EALRIKDEMIT-RGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLL 422

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ + K   ++    +L  +     TP+  T++ LI GLC  S + +A  +  +      
Sbjct: 423 IDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV 482

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +P+VF Y TLI    +     +A+ L + M ANG         P+   YN +I GLC+  
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG-------VLPDLFCYNCLIIGLCRAK 535

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++AK L + M ++ I P+  TY + I  +  + +   A+R F +M+  G+ P+ V ++
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++   C  G   +A    + M+ +G+ P+   Y+ +I       K   A  +F+     
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV  YN+LI+ +CK  D+E+A  LY EML  GI P +V YNTL  GL ++ +V +A
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LFDE+    +  D  TY+  IDG CKSG + EA +LF  +       +   Y  LIDG
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 199/382 (52%), Gaps = 7/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++       +K+         FK + S+G+ P+   ++ILI   C +G        
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+   ++++I  L    +  EA  +F K       PDVF YN+LI+G C+
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK 673

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L++EM + NG       PN V YNT+I+GLCK G V KA+ELF +++++++
Sbjct: 674 EGDIEKASQLYDEMLH-NG-----INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY+++I G+C + +  EA +LF EM+ +G+ PD   + +++D   K G ++KA  
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L      + V  +   +N+LID +C   K+  AR+LF  M       ++V+Y  LI+ Y 
Sbjct: 788 LFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 846

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K + +EEA  L+ +M ++ I P  +TY +L L   +I    + + LF +M    +A D  
Sbjct: 847 KAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAI 906

Query: 465 TYNNFIDGLCKSGFVLEALELF 486
            Y       CK G  LEAL+L 
Sbjct: 907 AYGVMASAYCKEGKSLEALKLL 928



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 210/439 (47%), Gaps = 41/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N   G L +    D  L + K +   GL PD +T+++L++ FCK  R     ++
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  S   PN  T+T+LI G   E  I EA  +  +      + +V TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++LF EM     E      P+T TYN +IDG  K   + KA EL  +MK   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGLE------PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TY+ +I G C+++D  +A  +  +M+  GV+P+V  +  ++    +  + + A  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL++MI  GV P+ + YN LI G C   K++ A+ L V M   G   +  +Y   IN Y 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 405 KNKDVE-----------------------------------EALSLYSEMLSKGIKPTVV 429
           K+ +++                                   EALS +  ML KG+ P + 
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            Y+ +   L +  + + A+ +F +  +  V  D + YN+ I G CK G + +A +L+  +
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 490 RDSKYELNIVSYNCLIDGL 508
             +    NIV YN LI+GL
Sbjct: 688 LHNGINPNIVVYNTLINGL 706



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 206/400 (51%), Gaps = 7/400 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L + K  +    L   +   G+ P+ +T+   IN + K G +      
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L S   PN V +T LIKG C     +EA + F         PD+  Y+ +I+ L +
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A+ +F +      + GVV  P+   YN++I G CKEG ++KA +L+ +M    I
Sbjct: 639 NGKTKEAMGVFLKFL----KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NP++V Y ++I G C   +  +A+ LF E+ ++ + PDVVT+S I+D  CK+G + +A +
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + MI +G++P+ Y Y  LIDG      ++ A  LF   +    +  + ++N+LI+ +C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFC 811

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  V EA  L+ +M+ K + P +VTY  L     +   +E A +LF +M   ++  +T 
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           TY + +    + G   + + LF+ +       + ++Y  +
Sbjct: 872 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVM 911



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 191/383 (49%), Gaps = 15/383 (3%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           ++  +  A + PD+YT++ +I   CK+G V  G +VL  + + C  PN  T+ + I GLC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLC 287

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               + EA  +          PD  TY  L++G C+   +  A  +FE M +        
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG------ 341

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----DVVTYTSVIRGFCYANDW 304
             PN  TY  +IDG  KEG +++A    L++KDE I      +VVTY ++I G   A + 
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEA----LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A  LF EM+  G++PD  T+++++D   K+  M KA  LL  M  R + P+ +TY+ L
Sbjct: 398 AKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I G C +  +  A ++   M  NG   +V  Y TLI  Y +    E A+ L   M++ G+
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P +  YN L +GL    +VE A  L  +M    +  + +TY  FI+   KSG +  A  
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
            F+ +  S    N V Y  LI G
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKG 600



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 196/380 (51%), Gaps = 9/380 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           S+F    S G FP +   + L+    K   +   + V G ++ +   P+  T+T++IK  
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFG 246
           C    +++   + ++     C+P++FTYN  I GLC+TG    AL + +  M  G G   
Sbjct: 253 CKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG--- 308

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               P+  TY  ++DG CK+    +AK +F  M    +NP+  TYT++I GF    +  E
Sbjct: 309 ----PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A R+  EM+ +G++ +VVT++ ++  + K G+M KA  L   M+  G+ P+T+TYN LID
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GY  +  +  A +L   M++        +Y+ LI+  C + D+++A  +  +M+  G+KP
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V  Y TL     +  + E A++L   M  N V  D + YN  I GLC++  V EA  L 
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 487 RAIRDSKYELNIVSYNCLID 506
             + +   + N  +Y   I+
Sbjct: 545 VDMGEKGIKPNAHTYGAFIN 564



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV+TY  +I   C+ G  I    +  EM          CKPN  TYN  I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A E+   M ++ + PD  TYT ++ GFC      EAK +F  M   G+ P+  T++ +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K G +++A R+ + MI RG+  N  TYN +I G     ++  A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D  +YN LI+ Y K+ D+ +A  L +EM ++ + P+  TY+ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + D+M RN V  + + Y   I    +      A+EL + +  +    ++  YNCLI GL
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 53/344 (15%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNG--------------EFGVVCKPNTVTYNTI 259
           +Y+ L   LC +G    A N+ E++                   EFG     N   ++  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFG---GSNLTVFDIF 178

Query: 260 IDGLCKEGFVDKAKELFL-----------------------------------KMKDENI 284
           ID     GF+++A  +F+                                    M +  I
Sbjct: 179 IDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI 238

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV TYT+VI+  C   D  + K +  E M++  +P++ T++  +  LC+ G +D+A  
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + +LM+ +G+ P+ +TY  L+DG+C   +   A+ +F SM S+G   +  +Y  LI+ + 
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  ++EEAL +  EM+++G+K  VVTYN +  G+ +  ++ +A+ LF+EM    +  DT+
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTW 417

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  IDG  KS  + +A EL   ++  K   +  +Y+ LI GL
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 48/378 (12%)

Query: 79   QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
            +GDI      +A  ++D ML  +   P +  +N L   L K         LF  +    L
Sbjct: 674  EGDIE-----KASQLYDEMLH-NGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727

Query: 139  FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             PD+ T+S +I+ +CK G ++  F +   ++    +P+   +  LI G   E  + +A +
Sbjct: 728  VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787

Query: 199  LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
            LF + +  +    +  +N+LI+  C+ G  I A  LF++M +          PN VTY  
Sbjct: 788  LFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK------LTPNIVTYTI 840

Query: 259  IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            +ID   K   +++A++LFL M+  NI P+ +TYTS++  +    +  +   LF +M  +G
Sbjct: 841  LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900

Query: 319  VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +  D + + V+    CK GK  +A +LL                +L++G  L D +    
Sbjct: 901  IACDAIAYGVMASAYCKEGKSLEALKLLN--------------KSLVEGIKLEDDV---- 942

Query: 379  KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
                             ++ LI   CK K +   L L SEM  + +  +  T NTL LG 
Sbjct: 943  -----------------FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGF 985

Query: 439  FEIHQVERALKLFDEMRR 456
            ++    + A K+   M+R
Sbjct: 986  YKSGNEDEASKVLGVMQR 1003


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/419 (33%), Positives = 207/419 (49%), Gaps = 12/419 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ + + M  M    P V +FN +   L K         L  R+       D      
Sbjct: 252 NEAMKLLEEMFLMG-CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  C+MG+V     +L +I      PN V + +LI G     R  EA  L  K+ V A
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 208 C-EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             EPD FT+N +I+GLC+ G+ + AL   +EM     E      PN +TY  +IDG CK+
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE------PNVITYTILIDGFCKQ 420

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  ++A ++   M  + ++ + V Y  +I   C      +A +++ EM  +G +PD+ TF
Sbjct: 421 GHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTF 480

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LCKN KM++A  L   M+  GV  NT TYNTLI  +   + I  A KL   M  
Sbjct: 481 NSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  D ++YN LI   CK    E+ L L  +M  + I P++ + N L        +V  
Sbjct: 541 RGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVND 600

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           AL+   +M +  +  D  TYN+ I+GLCK G   EAL LF  ++      + V+YN LI
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 217/446 (48%), Gaps = 26/446 (5%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +A  +   M  ++   P   S+N++   L          ++F  + S G+ P +YT  
Sbjct: 145 PGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFG 204

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++  FC +  V     +L  + +    PN++ +  LI  L   +R+ EA  L  +  + 
Sbjct: 205 VVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLM 264

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM---------------ANGNGEFGVVCK- 250
            CEPDV T+N +I+GLC+ G    A  L + M                +G    G V + 
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324

Query: 251 ---------PNTVTYNTIIDGLCKEGFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCY 300
                    PNTV YNT+I+G    G  ++AK+L  K M      PD  T+  +I G C 
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                 A     EM+ +G +P+V+T+++++D  CK G  ++AS+++  M  +G++ NT  
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN LI   C   KI  A +++  M S GC  D+ ++N+LI   CKN  +EEAL LY +ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            +G+    VTYNTL      +  +++A KL  EMR      D  TYN  I  LCK+G   
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564

Query: 481 EALELFRAIRDSKYELNIVSYNCLID 506
           + L L   +   +   +I S N LI+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILIN 590



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 164/341 (48%), Gaps = 31/341 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FNI+   L K  +  + L     +   G  P++ T++ILI+ FCK G       V
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +     + N V +  LI  LC + +I +A  ++ +     C+PD++T+N+LI GLC+
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 225 TGHTIVALNLFEEM------AN------------------------GNGEFGVVCKPNTV 254
                 AL L+ +M      AN                        G   F   C  + +
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG-CPLDNI 548

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TYN +I  LCK G  +K   L  +M  E I P + +   +I  FC     N+A +   +M
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           + +G+ PD+VT++ +++ LCK G+  +A  L   +  +G++P+  TYNTLI  YC     
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           + A +L     SNG + + ++++ LIN++ KN    E  ++
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTI 709



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 134/269 (49%), Gaps = 12/269 (4%)

Query: 245 FGVVC-KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           +GV C +P   +YN +++ L        A  +F  M    I+P V T+  V++ FC  N+
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            + A  L  +M   G  P+ + + +++  L +N ++++A +LLE M   G  P+  T+N 
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I G C   +I  A KL   M       D +    L++  C+   V+EA +    MLSK 
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLSKI 331

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA----DTYTYNNFIDGLCKSGFV 479
             P  V YNTL  G     + E A    D + +N V A    D +T+N  IDGLCK G++
Sbjct: 332 PNPNTVLYNTLINGYVVSGRFEEAK---DLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYL 388

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + ALE    +    +E N+++Y  LIDG 
Sbjct: 389 VSALEFLDEMVKKGFEPNVITYTILIDGF 417



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 9/256 (3%)

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y  +ID L   G      +L  +MKDE        +  ++R +  A    +A RL ++M
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155

Query: 315 MDQGV---QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
              GV   +P   +++V+++ L        A  +   M+ RG++P  YT+  ++  +C+ 
Sbjct: 156 W--GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV 213

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           +++D A  L   M  +GC+ + + Y  LI+   +N  V EA+ L  EM   G +P V T+
Sbjct: 214 NEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N +  GL +  ++  A KL D M      AD       + GLC+ G V EA  +   I +
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN 333

Query: 492 SKYELNIVSYNCLIDG 507
                N V YN LI+G
Sbjct: 334 P----NTVLYNTLING 345


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 219/425 (51%), Gaps = 16/425 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M R   +P PP+    +   C A    +   + + + L+  G   D+   ++
Sbjct: 129 DALAVLDDMARRGCAPTPPMYHVTLEAACRASG--FRGAVGVLRDLHGRGCALDVGNCNL 186

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++   C  G V     +L  +L S    P+ V++ ++++GLC   R      L  +    
Sbjct: 187 VLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAA 246

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGL 263
            C P++ T++TLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+
Sbjct: 247 GCPPNIVTFSTLIGHLCRNG-------LFERVHEVHAQMAEHG--CAPDVRMYATIIDGV 297

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CKE  ++ A+ +  +M    ++P+VV Y ++++G C A+ W EA+ L  EM D+    D 
Sbjct: 298 CKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDD 357

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VTF++++D LC+NG +D+   +LE M+  G  P+  TY T+I+G+C    ID A  L  S
Sbjct: 358 VTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRS 417

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M + GC  + VSY  ++   C  +   +A  L S+M+ +G  P  VT+NTL   L +   
Sbjct: 418 MAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           VE+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   +       N + Y+ 
Sbjct: 478 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS 537

Query: 504 LIDGL 508
           +   L
Sbjct: 538 IASAL 542



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 209/421 (49%), Gaps = 6/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +   +L      P V S+N +   L   + +  V  L + + +AG  P+I T S 
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+ G       V  ++      P+   + ++I G+C E R+  A  +  +   + 
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V  YNTL+ GLC       A  L  EM      F   C  + VT+N ++D LC+ G
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEM------FDKDCPLDDVTFNILVDFLCQNG 371

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+  E+  +M +    PDV+TYT+VI GFC     +EA  L   M   G +P+ V+++
Sbjct: 372 LVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYT 431

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  LC   +   A  L+  MI +G  PN  T+NTLI+  C    ++ A +L   M  N
Sbjct: 432 IVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 491

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D++SY+T+I+   K  + +EAL L + M+ KG+ P  + Y+++   L    ++ + 
Sbjct: 492 GCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKV 551

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++F+ ++   V +D   YN  I  LCK G    A+E    +  S    N  +Y  LI G
Sbjct: 552 IQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRG 611

Query: 508 L 508
           L
Sbjct: 612 L 612



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 196/383 (51%), Gaps = 6/383 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP + +F+ L G L +N  ++ V  +  ++   G  PD+  ++ +I+  CK  R+     
Sbjct: 249 PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARG 308

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L R+     +PN V + +L+KGLC+  R  EA  L  +     C  D  T+N L++ LC
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G     + + E+M     E G  C P+ +TY T+I+G CKEG +D+A  L   M    
Sbjct: 369 QNGLVDRVIEVLEQML----EHG--CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+ V+YT V++G C A  W +A+ L  +M+ QG  P+ VTF+ +++ LCK G +++A 
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+ M+  G +P+  +Y+T+IDG       D A +L   M   G   + + Y+++ +  
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
                + + + ++  +    ++   V YN +   L +  + +RA++    M  +    + 
Sbjct: 543 SGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNE 602

Query: 464 YTYNNFIDGLCKSGFVLEALELF 486
            TY   I GL   GFV EA E+ 
Sbjct: 603 STYTILIRGLASEGFVKEAQEIL 625



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 150/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL   L +N   D V+ + +++   G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 359 TFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM 418

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN V++T ++KGLC+  R ++A  L ++     C P+  T+NTLIN LC+ G  
Sbjct: 419 AACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 478

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  D+A EL   M  + ++P+
Sbjct: 479 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  V+ D V ++ ++  LCK G+ D+A   L 
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA 591

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G      +  A+++   + S G + 
Sbjct: 592 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALR 635



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 13/328 (3%)

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            ++LI+ LCA  R  EAA   +     A    V  YN ++ G CR G    A  L     
Sbjct: 50  LSALIRSLCAAGRTAEAARALSAAGGGA---GVVAYNAMVAGYCRAGQLAAARRLAAS-- 104

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                  V   PN  TY  ++  LC  G +  A  +   M      P    Y   +   C
Sbjct: 105 -------VPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAAC 157

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL-ELMIWRGVNPNT 358
            A+ +  A  +  ++  +G   DV   ++++  +C  G +D+A RLL +L+   G  P+ 
Sbjct: 158 RASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDV 217

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            +YN ++ G C+  +  H + L   M + GC  ++V+++TLI   C+N   E    ++++
Sbjct: 218 VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQ 277

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M   G  P V  Y T+  G+ +  ++E A  + + M    ++ +   YN  + GLC +  
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLID 506
             EA  L   + D    L+ V++N L+D
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVD 365



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 4/219 (1%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y +++ G+C A    +            V P+  T+  ++  LC  G++  A  +L+ M 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RG  P    Y+  ++  C       A  +   +   GC  DV + N ++   C    V+
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 411 EALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           EA+ L  ++L S G +P VV+YN +  GL    +      L +EM       +  T++  
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I  LC++G      E+   + +     ++  Y  +IDG+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGV 297


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 203/369 (55%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD YT++ LI   C  GR ++   VL  +LR    P+ VT+T L++  C  S   +A  L
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             + R   C PD+ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV+YN +
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTVSYNIV 143

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           + GLC     + A+EL  +M  +   P+VVT+  +I   C       A  +  ++   G 
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 203

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+ ++++ ++   CK  KMDKA   L+LM+ RG  P+  +YNTL+   C + ++D A +
Sbjct: 204 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 263

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   ++  GC   ++SYNT+I+   K    +EAL L +EM+SKG++P ++TY+T+  GL 
Sbjct: 264 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 323

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              ++E A++ F +++   +  +T  YN  I GLCK      A++LF  +  +    N  
Sbjct: 324 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 383

Query: 500 SYNCLIDGL 508
           +Y  LI+GL
Sbjct: 384 TYTILIEGL 392



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 185/365 (50%), Gaps = 7/365 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D MLR     P V ++ IL     K   Y   + L   +   G  PDI T+++++
Sbjct: 51  ALAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  C+ GRV      L  +      PN V++  ++KGLC   R  +A  L  +     C 
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 169

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V T+N LI+ LCR G    AL + E++     ++G  C PN+++YN ++   CK+  +
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIP----KYG--CTPNSLSYNPLLHAFCKQKKM 223

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DKA      M      PD+V+Y +++   C + + + A  L  ++ D+G  P +++++ +
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D L K GK  +A  LL  M+ +G+ P+  TY+T+  G C  D+I+ A + F  ++  G 
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V YN +I   CK ++   A+ L++ M+  G  P   TY  L  GL     ++ A  
Sbjct: 344 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 403

Query: 450 LFDEM 454
           L DE+
Sbjct: 404 LLDEL 408



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 154/296 (52%), Gaps = 9/296 (3%)

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN ++ G C  G    A  L  EM           +P+  TYNT+I GLC  G    A
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANA 51

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +  +M      PDVVTYT ++   C  + + +A +L  EM D+G  PD+VT++V+++ 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           +C+ G++D A   L+ +   G  PNT +YN ++ G C  ++ + A +L   M   GC  +
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV++N LI++ C+   VE AL +  ++   G  P  ++YN L     +  ++++A+   D
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M       D  +YN  +  LC+SG V  A+EL   ++D      ++SYN +IDGL
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 63/149 (42%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           + L+     P + S+N +   L K       L L   + S GL PDI T+S +    C+ 
Sbjct: 266 HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 325

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            R+       G++      PN V + ++I GLC       A  LF       C P+  TY
Sbjct: 326 DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY 385

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGE 244
             LI GL   G    A +L +E+ +  GE
Sbjct: 386 TILIEGLAYEGLIKEARDLLDELCSRAGE 414


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA   F Y ++     P + + N L     K    +    L+  +    +   +YT +I
Sbjct: 168 DEAFECF-YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNI 226

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  CK G++      +G +  S   PN VT+ +++ G C+  R+  A A+ T  +   
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD FTY +LI+G+C+ G    A  +FEEM           +P+ V YNT+IDG C +G
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG------LRPSAVIYNTLIDGFCNKG 340

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A     +M  + I+P + TY S+I         +EA+ +  E+ ++G+ PD +T++
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  C+     KA  L + M+  G+ P   TY +L+      +++  A  LF  + S 
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D + +N LI+ +C N +V+ A  L  +M    + P  VT+NT+  G     +VE A
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEA 520

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LFDEM+R  +  D  ++N  I G  + G + +A  +   + D+ +   +++YN L+ G
Sbjct: 521 RELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580

Query: 508 L 508
           L
Sbjct: 581 L 581



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 207/413 (50%), Gaps = 9/413 (2%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           + LR+  S   V +FNI+   L K             + ++G+ P+I T++ +++ +C  
Sbjct: 213 FRLRIKSS---VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           GRV     +L  + R    P++ T+ SLI G+C + R+ EA+ +F +       P    Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           NTLI+G C  G+  +A    +EM            P   TYN++I  L  E   D+A+ +
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKG------ISPTMSTYNSLIHALFMEQRTDEAECM 383

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +++++ I+PD +TY  +I G+C   +  +A  L  EM+  G++P   T++ ++  L K
Sbjct: 384 IKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             +M +A  L + +   GV P+   +N LIDG+C    +  A +L   M+      D V+
Sbjct: 444 KNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVT 503

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +NT++  +C+   VEEA  L+ EM  +GIKP  +++NTL  G      ++ A ++ +EM 
Sbjct: 504 FNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEML 563

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                    TYN  + GLCK+     A EL + +       +  +Y  LI+G+
Sbjct: 564 DTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 202/420 (48%), Gaps = 12/420 (2%)

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTHSI 147
           LC+   ++   PSP P  + ++L   L      +++  +F+ L ++     F        
Sbjct: 100 LCLAIVIVARLPSPKP--ALHLLRQALGGGT-TNSIREIFEFLAASRDRLGFKSSIVFDY 156

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C M R    F     +      P   T  SL+      +R   A  L+ +     
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +  V+T+N +IN LC+ G    A +    M       GV  KPN VTYNTI+ G C  G
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNTIVHGYCSSG 270

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A  +   MK + I PD  TY S+I G C      EA ++F EM+ +G++P  V ++
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  C  G +D AS   + M+ +G++P   TYN+LI    +  + D A  +   ++  
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN LIN YC+  + ++A  L+ EML+ GIKPT  TY +L   L + ++++ A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF ++    V  D   +N  IDG C +  V  A EL + +   K   + V++N ++ G
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 167/339 (49%), Gaps = 8/339 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   + K    +    +F+ +   GL P    ++ LI+ FC  G +      
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+   +P   T+ SLI  L  E R  EA  +  + +     PD  TYN LING CR
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             +   A  L +EM A+G        KP   TY +++  L K+  + +A +LF K+  E 
Sbjct: 409 CANAKKAFLLHDEMLASG-------IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD + + ++I G C  ++   A  L  +M    V PD VTF+ IM   C+ GK+++A 
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M  RG+ P+  ++NTLI GY     I  A ++   M   G    V++YN L+   
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           CKN++ + A  L  EM+SKG+ P   TY TL  G+ +++
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 6/204 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L+K         LFK++ S G+ PD    + LI+  C    V   F +
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFEL 488

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R    P+ VTF ++++G C E ++ EA  LF + +    +PD  ++NTLI+G  R
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSR 548

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +  EM +          P  +TYN ++ GLCK    D A+EL  +M  + +
Sbjct: 549 RGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602

Query: 285 NPDVVTYTSVIRGFCYANDWNEAK 308
            PD  TY ++I G    N  +E K
Sbjct: 603 TPDDTTYFTLIEGIAKVNIPDENK 626


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 225/435 (51%), Gaps = 14/435 (3%)

Query: 72  ERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLF 130
           + C ++G  D+       AL +   M R   +PPP + S+N++   L ++      L +F
Sbjct: 165 QACVAAGDLDV-------ALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVF 217

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
             +   G+ P+  T++ +I+   K G +  GF +  ++L     PN VT+  L+ GLC  
Sbjct: 218 DEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRA 277

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            R+ E   L  +    +  PD FTY+ L +GL RTG +   L+LF E        G    
Sbjct: 278 GRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLG---- 333

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
               T + +++GLCK+G V KA+++   +    + P  V Y ++I G+C   D   A  +
Sbjct: 334 --AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F +M  + ++PD +T++ +++ LCK   + KA  L+  M   GV+P+  T+NTLID Y  
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +++    +   M+  G   DV+S+ +++  +CKN  + EA+++  +M+ K + P    
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YN++     E    E+A  L ++M+ + V+A   TYN  + GLC+S  + EA EL   +R
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 491 DSKYELNIVSYNCLI 505
           +     ++VSYN +I
Sbjct: 572 NQGLRPDVVSYNTII 586



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 206/409 (50%), Gaps = 7/409 (1%)

Query: 100 MHPSPPP-VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           +H  P P + ++N+L   L +    D    L   + S  +FPD +T+SIL +   + G  
Sbjct: 256 LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 315

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +    L+      A T + L+ GLC + ++ +A  +          P    YNTL
Sbjct: 316 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 375

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ING C+      A  +FE+M + +       +P+ +TYN +I+GLCK   V KA++L ++
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M+   ++P V T+ ++I  +  A    +   +  +M  +G++ DV++F  ++   CKNGK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + +A  +L+ MI++ V PN   YN++ID Y  +   + A  L   M+++G    +V+YN 
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           L+   C++  ++EA  L   + ++G++P VV+YNT+          ++AL+L  EM +  
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +     TY+  +  L  +G V +   L++ +     E +   Y  ++D 
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 201/405 (49%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +SS N+L   L     +  V + F  L +AG  PD +  + ++      G +     +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 165 LGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           + R+ RS     P+A ++  +I GL    +  +A  +F +       P+  TYNT+I+G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            + G       L ++M +         KPN VTYN ++ GLC+ G +D+ + L  +M   
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGP------KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH 293

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           ++ PD  TY+ +  G     +      LF E + +GV     T S++++ LCK+GK+ KA
Sbjct: 294 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 353

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            ++LE+++  G+ P T  YNTLI+GYC    +  A  +F  M+S     D ++YN LIN 
Sbjct: 354 EQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK + V +A  L  EM   G+ P+V T+NTL        Q+E+   +  +M++  + +D
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++ + +   CK+G + EA+ +   +       N   YN +ID 
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 185/425 (43%), Gaps = 43/425 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E   + D M   H   P   +++ILF  L +     T+LSLF      G+    YT SI
Sbjct: 281 DETRVLMDEMAS-HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 339

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  CK G+V+    VL  ++ +   P  V + +LI G C    +  A  +F + +   
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  TYN LINGLC+      A +L  EM            P+  T+NT+ID     G
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG------VDPSVETFNTLIDAYGTAG 453

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCY--------------------------- 300
            ++K   +   M+ + I  DV+++ SV++ FC                            
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 301 --------ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                   + D  +A  L  +M + GV   +VT+++++  LC++ ++D+A  L+  +  +
Sbjct: 514 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  +YNT+I   C     D A +L   M   G    + +Y+TL++       V + 
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 633

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA-ADTYTYNNFID 471
             LY +ML K ++P+   Y  +           +   L  EM    +A  DT   N+ +D
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRSNHELD 693

Query: 472 GLCKS 476
            +  S
Sbjct: 694 RIIAS 698


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/376 (35%), Positives = 205/376 (54%), Gaps = 19/376 (5%)

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T+ ILI  F   G +     +L  +  + F  NAV  T+L+KGLC   R++EA  
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 199 LFTKHRVFA--CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVT 255
            F   R  A  C PDV TY  L++ LC+ G    A  +  EM A G       C P+TVT
Sbjct: 66  HF---RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG-------CAPDTVT 115

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE---AKRLFI 312
           ++T+IDGLCK G  ++A  +   +    +      + ++I+  C  N +N    A ++  
Sbjct: 116 FSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC--NKYNSVELASKVLG 173

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            ++ +G  P V+ F+++++  CK   +D A +LLE+MI +G  PN +T+  LI G C  +
Sbjct: 174 VVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN 233

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           ++  A++L   M + GC  +VV+Y+T+IN  CK   V++A  L+  M  +   P VVT+N
Sbjct: 234 RVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHN 293

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  GL +  ++E A +L+  MR    A D  TYN+ IDGLCKS  V EA +LF+ I +S
Sbjct: 294 ILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPES 353

Query: 493 KYE-LNIVSYNCLIDG 507
                N V+Y+ L  G
Sbjct: 354 GVSAANAVTYSTLFHG 369



 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 217/460 (47%), Gaps = 48/460 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL  F  M +     P V ++  L   L K   +D    + + + + G  PD  T S L
Sbjct: 62  EALEHFRAMAK--DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 149 INCFCKMGRVSHGF------------------------------------VVLGRILRSC 172
           I+  CK G     F                                     VLG ++   
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           FTP  + F  +I G C    +  A  L        C P+VFT+  LI GLC+      A 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L E+M  G       C PN VTY+T+I+GLCK+G VD A ELF  M+  N  P+VVT+ 
Sbjct: 240 QLLEKMVTGG------CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHN 293

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            +I G C A    EA++L+  M + G  PD++T++ ++D LCK+ ++D+A +L + +   
Sbjct: 294 ILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPES 353

Query: 353 GVN-PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           GV+  N  TY+TL  GY    ++  A ++F  +   G   D+ +Y +LI  YCK     E
Sbjct: 354 GVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVE 413

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            + L  EM SKG  P V T + +  GLFE +  ERA++LFD M       D   YN  ++
Sbjct: 414 VVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVE 473

Query: 472 GLCKSGFVLEALELFRAI---RDSKYELNIVSYNCLIDGL 508
           G+ ++    +AL +   +   RD K+  +  + + L++ L
Sbjct: 474 GMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESL 513



 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 206/404 (50%), Gaps = 11/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ IL    +     D  + L + + S G   +   H+ L+   C  GRV      
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + + C  P+ +T+T+L+  LC   +  EA  +  +     C PD  T++TLI+GLC+
Sbjct: 67  FRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 225 TGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLC-KEGFVDKAKELFLKMKDE 282
            G    A  + E+ +  G G        +   + TII  LC K   V+ A ++   +  +
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGN-------SDAAFETIIQRLCNKYNSVELASKVLGVVIAK 178

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              P V+ +  VI GFC A D + A +L   M+++G  P+V TF++++  LCK  ++ +A
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +LLE M+  G +PN  TY+T+I+G C   ++D A +LF  ME   C  +VV++N LI+ 
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV-AA 461
            CK K +EEA  LY  M   G  P ++TYN+L  GL +  QV+ A +LF  +  + V AA
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 358

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  TY+    G    G + +A  +F  + D  +  ++ +Y  LI
Sbjct: 359 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 175/337 (51%), Gaps = 43/337 (12%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+ FTY  LI G    G   +A+ L EEM + NG  G     N V + T++ GLC  G
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS-NGFEG-----NAVVHTTLMKGLCDAG 58

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A E F  M  ++  PDV+TYT+++   C A  ++EA+ +  EM+ +G  PD VTFS
Sbjct: 59  RVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFS 117

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVN-------------------------------- 355
            ++D LCK G  ++A R+LE +I RG+                                 
Sbjct: 118 TLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIA 177

Query: 356 ----PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
               P    +N +I+G+C    +D A KL   M   GC+ +V ++  LI   CK   V E
Sbjct: 178 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  L  +M++ G  P VVTY+T+  GL +  QV+ A +LF  M R +   +  T+N  ID
Sbjct: 238 AQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK+  + EA +L+  +R++    +I++YN LIDGL
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 334



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 192/378 (50%), Gaps = 10/378 (2%)

Query: 135 SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
           + G  P +   +++IN FCK   +   + +L  ++     PN  TFT LI GLC  +R+ 
Sbjct: 177 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA  L  K     C P+V TY+T+INGLC+ G    A  LF+ M   N      C PN V
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVV 290

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T+N +IDGLCK   +++A++L+ +M++    PD++TY S+I G C +   +EA +LF  +
Sbjct: 291 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350

Query: 315 MDQGVQ-PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            + GV   + VT+S +       G+M  A R+  +++ +G +P+  TY +LI  YC T +
Sbjct: 351 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
                +L   M S G    V + + ++    +    E A+ L+  M ++G     + YN 
Sbjct: 411 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 470

Query: 434 LFLGLFEIHQVERALKLFDEM---RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +  G+    +  +AL + +++   R       +   +  ++ LC+ G   +A +L   + 
Sbjct: 471 VVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS 530

Query: 491 DSKYELNIVSYNCLIDGL 508
           +  +   + SYN L+ GL
Sbjct: 531 ERGFAAAVSSYNGLLSGL 548



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 206/408 (50%), Gaps = 10/408 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  FN++     K K  D+   L + +   G  P+++T +ILI   CK  RV     +
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++    +PN VT++++I GLC + ++ +A  LF       C P+V T+N LI+GLC+
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L+  M     E G  C P+ +TYN++IDGLCK   VD+A +LF  + +  +
Sbjct: 302 AKRIEEARQLYHRMR----ETG--CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 355

Query: 285 N-PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  + VTY+++  G+       +A R+F  ++D+G  PD+ T++ ++ E CK  +  +  
Sbjct: 356 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 415

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+E M  +G  P   T + ++ G    +  + A +LF SM + GC  D + YN ++   
Sbjct: 416 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 475

Query: 404 CKNKDVEEALSLYSEMLSK---GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
            +     +AL++  +++ K      P+    + L   L ++ + + A +L  +M     A
Sbjct: 476 ARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFA 535

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           A   +YN  + GL +     EA ++F A+  +     I + N +I  L
Sbjct: 536 AAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWL 583



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 197/438 (44%), Gaps = 43/438 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F IL   L K         L +++ + G  P++ T+S +IN  CK G+V   + +
Sbjct: 217 PNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYEL 276

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    PN VT   LI GLC   RI EA  L+ + R   C PD+ TYN+LI+GLC+
Sbjct: 277 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +     A  LF+ +         V   N VTY+T+  G    G +  A  +F  + D+  
Sbjct: 337 SFQVDEAFQLFQTIPESG-----VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 391

Query: 285 NPDVVTYTSVIRGFCY-----------------------------------ANDWNEAKR 309
           +PD+ TYTS+I  +C                                     N    A +
Sbjct: 392 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 451

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI---WRGVNPNTYTYNTLID 366
           LF  M  +G   D + ++++++ + +  K +KA  +LE +I    R  NP++   + L++
Sbjct: 452 LFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVE 511

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
             C   + D A++L   M   G    V SYN L++   + +  +EA  ++  M+S G  P
Sbjct: 512 SLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAP 571

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            + T N +   L    +V+ A +L   M +     D  T N  I G CKSG    A +L 
Sbjct: 572 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLL 631

Query: 487 RAIRDSKYELNIVSYNCL 504
             + ++  E N  +++ L
Sbjct: 632 EEMTEAGLEPNDTTHDLL 649



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 179/384 (46%), Gaps = 11/384 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M R +  PP V + NIL   L K K  +    L+ R+   G  PDI T++ 
Sbjct: 271 DDAYELFQLMERRN-CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK  +V   F +   I  S  +  NAVT+++L  G  A  R+ +A  +F+     
Sbjct: 330 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD+ TY +LI   C+T   +  + L EEMA+          P   T + ++ GL + 
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG------FPPRVNTLSAVLGGLFEG 443

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDV 323
              ++A +LF  M       D + Y  V+ G   A+  N+A  +    I+  D+   P  
Sbjct: 444 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSS 503

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
                +++ LC+ G+ D A +LL  M  RG      +YN L+ G     + D A ++F +
Sbjct: 504 SAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA 563

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S G   ++ + N +I+W C    V++A  L   M   G  P + T NTL  G  +  +
Sbjct: 564 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 623

Query: 444 VERALKLFDEMRRNHVAADTYTYN 467
            + A KL +EM    +  +  T++
Sbjct: 624 ADLARKLLEEMTEAGLEPNDTTHD 647


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 206/440 (46%), Gaps = 13/440 (2%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            L+ R  S+ QG +          ++  M+     PP   +F +    L +    D  L+
Sbjct: 124 LLQRRPVSASQGGLPRA---RRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALA 180

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L + +   G  PD   +  +I+  C  G V+    +L  +L      +  TF  +++G+C
Sbjct: 181 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 240

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R+ EAA L  +     C P V TY  L+ GLCR            +        G V
Sbjct: 241 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRV----------RQADEARAMLGRV 290

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            + N V +NT+I G   EG + +A EL+  M  +   PD  TY+ ++ G C       A 
Sbjct: 291 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 350

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           RL  EM  +G  P+VVT+++++   CKNG  D    LLE M  +G+  N+  YN +I   
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   ++D A  L   M S GC  D+ SYNT+I   C N+ +EEA  ++  +L +G+    
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TYNT+   L    + + A++L  EM  +  + D  +YN  I  +CK G V  +L L   
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + +   + N VSYN LI  L
Sbjct: 531 MAEKGIKPNNVSYNILISEL 550



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 199/407 (48%), Gaps = 23/407 (5%)

Query: 112 ILFGCLAKNKHYDTVLS-------------LFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           +L GC A    +D V+              L  R+ + G  P + T+  L+   C++ + 
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +LGR+       N V F ++I G  AE ++ EA  L+    +  C+PD  TY+ L
Sbjct: 281 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++GLC+ G    A+ L  EM            PN VTY  ++   CK G  D  + L  +
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  + +  +   Y  +I   C     +EA  L  EM  QG  PD+ +++ I+  LC N +
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           M++A  + E ++  GV  N  TYNT+I       +   A +L   M  +GC  DVVSYN 
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 510

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI   CK+ +V+ +L L  EM  KGIKP  V+YN L   L +  +V  AL+L  +M    
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A D  TYN  I+GLCK G++  AL L   + +     +I++YN LI
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 173/327 (52%), Gaps = 8/327 (2%)

Query: 110 FN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           FN ++ GCLA+ K  +    L++ +   G  PD +T+SIL++  CK+GR+     +L  +
Sbjct: 298 FNTVIGGCLAEGKLAEAT-ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 356

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +  F PN VT+T ++   C      +  AL  +        +   YN +I  LC+ G  
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L +EM +        C P+  +YNTII  LC    +++A+ +F  + +E +  + 
Sbjct: 417 DEAMGLIQEMRSQG------CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TY ++I        W +A RL  EM+  G   DVV+++ ++  +CK+G +D++  LLE 
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+ PN  +YN LI   C   ++  A +L   M + G   D+V+YNTLIN  CK   
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 590

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLF 435
           +  AL+L  ++ ++ + P ++TYN L 
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNILI 617



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+N L   + K+ + D  L L + +   G+ P+  +++ILI+  CK  RV     +  
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           ++L     P+ VT+ +LI GLC    +  A  L  K       PD+ TYN LI+  C+
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+NIL   L K +     L L K++ + GL PDI T++ LIN  CKMG +     +L ++
Sbjct: 542 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
                 P+ +T+  LI   C    + +AA L  +     C
Sbjct: 602 HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 641


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 84  LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           L  PNEAL  F Y+++     P + + N +     K         L+  +    +   +Y
Sbjct: 159 LKKPNEALECF-YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLY 217

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T +I+IN  CK G++      +G +      PN VT+ ++I G C   +   A  +F   
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
           +    EPD +TYN+ I+GLC+ G    A  L  +M  G    G+V  PN VTYN +IDG 
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG----GLV--PNAVTYNALIDGY 331

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C +G +DKA     +M  + I   +VTY   I          +A  +  EM ++G+ PD 
Sbjct: 332 CNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDA 391

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT +++++  C+ G   +A  LL+ M+ +G+ P   TY +LI      +++  A  LF  
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ++  G + D++ +N LI+ +C N +++ A  L  EM +  + P  +TYNTL  G     +
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           VE A +L DEM+R  +  D  +YN  I G  K G + +A  +   +  + ++  I++YN 
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571

Query: 504 LIDGL 508
           LI GL
Sbjct: 572 LIQGL 576



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 200/370 (54%), Gaps = 8/370 (2%)

Query: 105 PPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P V ++N I+ G   + K +     +F+ +   GL PD YT++  I+  CK GR+     
Sbjct: 249 PNVVTYNTIIHGHCLRGK-FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ ++L     PNAVT+ +LI G C +  + +A A   +         + TYN  I+ L 
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALF 367

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A N+ +EM     E G++  P+ VT+N +I+G C+ G   +A  L  +M  + 
Sbjct: 368 MEGRMGDADNMIKEMR----EKGMM--PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P +VTYTS+I      N   EA  LF ++  +G+ PD++ F+ ++D  C NG +D+A 
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +LL+ M    V P+  TYNTL+ GYC   K++ AR+L   M+  G   D +SYNTLI+ Y
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  D+++A  +  EM++ G  PT++TYN L  GL +  + E A +L  EM    +  D 
Sbjct: 542 SKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601

Query: 464 YTYNNFIDGL 473
            TY + I+ +
Sbjct: 602 STYLSIIEAM 611



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 209/429 (48%), Gaps = 17/429 (3%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           ++L T + A+C+  Y L   PSP P  S N++   +       T  ++F  L  A    D
Sbjct: 91  LDLATSSLAICVL-YRL---PSPKP--SINLIQRLILSPTC--TNRTIFDELALARDRVD 142

Query: 142 IYT---HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             T     +L+  +C++ + +        I    F PN  T   ++      +R   A  
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ +         ++T+N +IN LC+ G    A      M       GV  KPN VTYNT
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMET----LGV--KPNVVTYNT 256

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           II G C  G   +A+ +F  MKD+ + PD  TY S I G C      EA  L  +M++ G
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG 316

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + P+ VT++ ++D  C  G +DKA    + MI +G+  +  TYN  I    +  ++  A 
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +   M   G M D V++N LIN YC+  D + A  L  EM+ KGI+PT+VTY +L   L
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            + ++++ A  LF ++++  +  D   +N  IDG C +G +  A +L + + + K   + 
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496

Query: 499 VSYNCLIDG 507
           ++YN L+ G
Sbjct: 497 ITYNTLMQG 505



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 73/151 (48%)

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           T  ++ L+  YC   K + A + F  ++  G + ++ + N +++ + K    + A  LY+
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           EM    I+ ++ T+N +   L +  ++++A +    M    V  +  TYN  I G C  G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               A  +F+ ++D   E +  +YN  I GL
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGL 296


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 225/419 (53%), Gaps = 7/419 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +EAL +   M R   +PPP + S+N++   L ++      L +F  +   G+ P+  T++
Sbjct: 175 DEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYN 234

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I+   K G +  GF +  ++L+    PN VT+  L+ GLC   R+ E  AL  +   +
Sbjct: 235 TMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY 294

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
           +  PD FTY+ L +GL RTG +   L+LF E      + GV+      T + +++GLCK+
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESL----KKGVII--GAYTCSILLNGLCKD 348

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V KA+++   +    + P    Y ++I G+C   D   A  +F +M  + ++PD +T+
Sbjct: 349 GKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITY 408

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + +++ LCK   + +A  L+  M   GV+P+  T+NTLID Y    +++    +   M+ 
Sbjct: 409 NALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQD 468

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   +V+S+ +++  +CKN  + EA+++  +M+ K + P    YN++     E    E+
Sbjct: 469 KGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQ 528

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           A  L ++M+ + V+A  +TYN  + GLCK+  + EA EL   + +     ++VSYN +I
Sbjct: 529 AFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 193/375 (51%), Gaps = 6/375 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L +    D   +L   + S  + PD +T+SIL +   + G       +
Sbjct: 263 PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSL 322

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G  L+      A T + L+ GLC + ++ +A  +          P    YNTLING C+
Sbjct: 323 FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQ 382

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++FE+M + +       +P+ +TYN +I+GLCK   + +A++L ++M+   +
Sbjct: 383 VRDLQGAFSIFEQMKSRH------IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGV 436

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P V T+ ++I  +  A    +   +  +M D+G++ +V++F  ++   CKNGK+ +A  
Sbjct: 437 DPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVA 496

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ MI + V PN   YN++ID Y  +   + A  L   M+S+G    + +YN L+   C
Sbjct: 497 ILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLC 556

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  ++EA  L   + ++G++P VV+YNT+          +RAL+L  EM +  +     
Sbjct: 557 KNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLR 616

Query: 465 TYNNFIDGLCKSGFV 479
           TY+  +  L  +G V
Sbjct: 617 TYHPLLSALGSAGRV 631



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 200/405 (49%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +SS N+L   L     +  V + F  L +AG  PD +  +  +      G +     +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 165 LGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           L R+ RS     P+A ++  +I GL    +  +A  +F +       P+  TYNT+I+G 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            + G       L ++M   +G      KPN VTYN ++ GLC+ G +D+ + L  +M   
Sbjct: 241 VKGGDLEAGFRLRDQMLQ-DGR-----KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY 294

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           ++ PD  TY+ +  G     D      LF E + +GV     T S++++ LCK+GK+ KA
Sbjct: 295 SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA 354

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            ++LE+++  G+ P T  YNTLI+GYC    +  A  +F  M+S     D ++YN LIN 
Sbjct: 355 EQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALING 414

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK + + EA  L  EM   G+ P+V T+NTL        Q+E+   +  +M+   + ++
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++ + +   CK+G + EA+ +   +       N   YN +ID 
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDA 519



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 41/364 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ILF  L +     T+LSLF      G+    YT SIL+N  CK G+V+    V
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   P    + +LI G C    +  A ++F + +     PD  TYN LINGLC+
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L  EM            P+  T+NT+ID   + G ++K   +   M+D+ I
Sbjct: 418 MEMITEAEDLVMEMEKSG------VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD---------------------- 322
             +V+++ SV++ FC      EA  +  +M+ + V P+                      
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531

Query: 323 -------------VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                        + T+++++  LCKN ++D+A  L+  +  +G+ P+  +YNT+I   C
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACC 591

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                D A +L   M        + +Y+ L++       V +   LY  M+ K ++P+  
Sbjct: 592 NKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSS 651

Query: 430 TYNT 433
            Y T
Sbjct: 652 IYGT 655


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 202/420 (48%), Gaps = 10/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL ++  M+     PP   +F +    L +    +  L+L + +   G  PD   +  +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTV 216

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  G V+    +L  +L      +  TF  +++G+C   R+ EAA L  +     C
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V TY  L+ GLCR            +        G V + N V +NT+I G   EG 
Sbjct: 277 MPGVMTYGFLLQGLCRV----------RQADEARAMLGRVPELNVVLFNTVIGGCLAEGK 326

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A EL+  M  +   PD  TY+ ++ G C     + A RL  EM  +G  P+VVT+++
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTI 386

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CKNG  D    LLE M  +G+  N+  YN +I   C   ++D A  L   M S G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+ SYNT+I   C N+ +EEA  ++  +L +G+    +TYNT+   L    + + A+
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L  EM  +  + D  +YN  I  +CK G V  +L L   + +   + N VSYN LI  L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 199/407 (48%), Gaps = 23/407 (5%)

Query: 112 ILFGCLAKNKHYDTVLS-------------LFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           +L GC A    +D V+              L  R+ + G  P + T+  L+   C++ + 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +LGR+       N V F ++I G  AE ++ EA  L+    +  C+PD  TY+ L
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++GLC+ G    A+ L  EM            PN VTY  ++   CK G  D  + L  +
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKG------FAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  + +  +   Y  +I   C     +EA  L  EM  QG  PD+ +++ I+  LC N +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           M++A  + E ++  GV  N  TYNT+I       +   A +L   M  +GC  DVVSYN 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI   CK+ +V+ +L L  EM  KGIKP  V+YN L   L +  +V  AL+L  +M    
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A D  TYN  I+GLCK G++  AL L   + +     +I++YN LI
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 174/327 (53%), Gaps = 8/327 (2%)

Query: 110 FN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           FN ++ GCLA+ K  +    L++ +   G  PD +T+SIL++  CK+GR+S    +L  +
Sbjct: 314 FNTVIGGCLAEGKLAEAT-ELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +  F PN VT+T ++   C      +  AL  +        +   YN +I  LC+ G  
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L +EM +        C P+  +YNTII  LC    +++A+ +F  + +E +  + 
Sbjct: 433 DEAMGLIQEMRSQG------CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TY ++I        W +A RL  EM+  G   DVV+++ ++  +CK+G +D++  LLE 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+ PN  +YN LI   C   ++  A +L   M + G   D+V+YNTLIN  CK   
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLF 435
           +  AL+L  ++ ++ + P ++TYN L 
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILI 633



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           +H     V S+N L   + K+ + D  L L + +   G+ P+  +++ILI+  CK  RV 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               +  ++L     P+ VT+ +LI GLC    +  A  L  K       PD+ TYN LI
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 220 NGLCRT 225
           +  C+ 
Sbjct: 634 SWHCKV 639



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 9/147 (6%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    +K  CK    G+++      +L + + M      P  VS +NIL   L K +
Sbjct: 520 DVVSYNGLIKAMCK---DGNVD-----RSLVLLEEMAEKGIKPNNVS-YNILISELCKER 570

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                L L K++ + GL PDI T++ LIN  CKMG +     +L ++      P+ +T+ 
Sbjct: 571 RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYN 630

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFAC 208
            LI   C    + +AA L  +     C
Sbjct: 631 ILISWHCKVRLLDDAAMLLNRAMAAVC 657


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 219/403 (54%), Gaps = 7/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++IL    A     +    L   ++ +G+ PDI+ ++ +I+C  K G++      
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      P+AVTF + I G     ++ EAA  F +       P+   Y  LING  +
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+ + AL++F  +       GV+  P+  T +  I GL K G V +A ++F ++K++ +
Sbjct: 591 AGNLMEALSIFRRLH----ALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 644

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV TY+S+I GFC   +  +A  L  EM  +G+ P++  ++ ++D LCK+G + +A +
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 704

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G+ P++ TY+T+IDGYC ++ +  A  LF  M S G       YN L++  C
Sbjct: 705 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC 764

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+E+A++L+ EML KG   T +++NTL  G  +  +++ A +LF EM    +  D  
Sbjct: 765 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 823

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   ID  CK+G + EA  LF+ +++    ++ V+Y  L+ G
Sbjct: 824 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 866



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 218/417 (52%), Gaps = 8/417 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D M + +  P  VS +  +   L   K       L +++  +GL P++  +SILI
Sbjct: 422 ALELLDEMEKRNLVPSAVS-YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             +   GR+     +L  +  S   P+   + ++I  L    ++ EA+    + +    +
Sbjct: 481 MAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 540

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD  T+   I G  +TG    A   F+EM +     G++  PN   Y  +I+G  K G +
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLD----HGLM--PNNPLYTVLINGHFKAGNL 594

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  +F ++    + PDV T ++ I G        EA ++F E+ ++G+ PDV T+S +
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G+++KA  L + M  +G+ PN + YN L+DG C +  I  ARKLF  M   G 
Sbjct: 655 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D V+Y+T+I+ YCK+++V EA SL+ EM SKG++P    YN L  G  +   +E+A+ 
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           LF EM +   A  T ++N  IDG CKS  + EA +LF+ +   +   + V+Y  +ID
Sbjct: 775 LFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA   F+ M +    P   ++ + L     +    D VL +   + S G+  ++ T+++
Sbjct: 315 NEAKLTFEEMQKTGLKPD-YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G++     +L  ++     PN+ TF  LI+G C E  +  A  L  +     
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   +Y  +INGLC      +A  L E+M           KPN V Y+ +I     EG
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSILIMAYASEG 487

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A+ L   M    + PD+  Y ++I     A    EA    +E+  +G++PD VTF 
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +    K GKM +A++  + M+  G+ PN   Y  LI+G+     +  A  +F  + + 
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHAL 607

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV + +  I+   KN  V+EAL ++SE+  KG+ P V TY++L  G  +  +VE+A
Sbjct: 608 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 667

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L DEM    +A + + YN  +DGLCKSG +  A +LF  + +   E + V+Y+ +IDG
Sbjct: 668 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 206/436 (47%), Gaps = 42/436 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F       +K          F  +   GL P+   +++LIN   K G +     +
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 600

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+      P+  T ++ I GL    R+ EA  +F++ +     PDVFTY++LI+G C+
Sbjct: 601 FRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 660

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM            PN   YN ++DGLCK G + +A++LF  M ++ +
Sbjct: 661 QGEVEKAFELHDEMCLKG------IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++I G+C + +  EA  LF EM  +GVQP    ++ ++   CK G M+KA  
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+ +G    T ++NTLIDGYC + KI  A +LF  M +   M D V+Y T+I+W+C
Sbjct: 775 LFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 833

Query: 405 KNKDVEEA-----------------------------------LSLYSEMLSKGIKPTVV 429
           K   +EEA                                    +L+ +M++KG+KP  V
Sbjct: 834 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY  +     +   +  A KL DE+    +      ++  I  LCK   + EA +L   +
Sbjct: 894 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953

Query: 490 RDSKYELNIVSYNCLI 505
            +   + ++ + N L+
Sbjct: 954 GELGLKPSLAACNTLV 969



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 202/405 (49%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ I+   L + K  +     F+ +   GL PD    S LI+ F + G +    + 
Sbjct: 296 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE-VLR 354

Query: 165 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  ++ SC  P N +T+  LI GLC   ++ +AA +        C+P+  T+  LI G C
Sbjct: 355 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R  +   AL L +EM   N        P+ V+Y  +I+GLC    +  A +L  KM    
Sbjct: 415 REHNMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+VV Y+ +I  +       EA+RL   M   GV PD+  ++ I+  L K GKM++AS
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L  +  RG+ P+  T+   I GY  T K+  A K F  M  +G M +   Y  LIN +
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  ++ EALS++  + + G+ P V T +    GL +  +V+ ALK+F E++   +  D 
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +TY++ I G CK G V +A EL   +       NI  YN L+DGL
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 199/404 (49%), Gaps = 12/404 (2%)

Query: 89  EALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           EAL IF    R+H     P V + +     L KN      L +F  L   GL PD++T+S
Sbjct: 596 EALSIFR---RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 652

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+ FCK G V   F +   +      PN   + +L+ GLC    I  A  LF      
Sbjct: 653 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 712

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             EPD  TY+T+I+G C++ +   A +LF EM +         +P++  YN ++ G CKE
Sbjct: 713 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG------VQPHSFVYNALVHGCCKE 766

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++KA  LF +M  +      +++ ++I G+C +    EA +LF EM+ + + PD VT+
Sbjct: 767 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 825

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  CK GKM++A+ L + M  R +  +T TY +L+ GY    +      LF  M +
Sbjct: 826 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 885

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D V+Y  +I  +CK  ++ EA  L  E++ KG+      ++ L   L +   +  
Sbjct: 886 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 945

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           A KL DEM    +       N  +    ++G + EA  +F  ++
Sbjct: 946 ASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVK 989



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++  L G L K         +   ++  GL P+ + +S++I   C++G +     +  
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKR 287

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN  T+T +  GLC   R+ EA   F + +    +PD    + LI+G  R G
Sbjct: 288 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 347

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                L + + M +           N +TYN +I GLCK G ++KA E+   M      P
Sbjct: 348 DIDEVLRIKDVMVSCG------IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP 401

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +  T+  +I G+C  ++   A  L  EM  + + P  V++  +++ LC    +  A++LL
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M + G+ PN   Y+ LI  Y    +I+ AR+L   M  +G   D+  YN +I+   K 
Sbjct: 462 EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 521

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +EEA +   E+  +G+KP  VT+    LG  +  ++  A K FDEM  + +  +   Y
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 581

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I+G  K+G ++EAL +FR +       ++ + +  I GL
Sbjct: 582 TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 203/425 (47%), Gaps = 10/425 (2%)

Query: 86  TPNEALCIFDYML---RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           TP  +  I D +L   R +    PV  F+IL     +    D   ++F    +  +   +
Sbjct: 135 TPYSSSSILDSVLFWFRNYGGSSPVV-FDILIDSYKRMGMLDEAANVFFVAKNDSILISL 193

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
              + L+    K G +   + V   +L +    +  T+T L+  LC    +  A  +  +
Sbjct: 194 IRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE 253

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  P+ F Y+ +I G+C+ G    A+ L   M    GE G+V  PNT TY  I  G
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM----GEKGLV--PNTYTYTIITAG 307

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LC+   +++AK  F +M+   + PD    +++I GF    D +E  R+   M+  G+  +
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 367

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           ++T++V++  LCK GKM+KA+ +L+ M+  G  PN+ T+  LI+GYC    +  A +L  
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ME    +   VSY  +IN  C  KD+  A  L  +M   G+KP VV Y+ L +      
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++E A +L D M  + VA D + YN  I  L K+G + EA      I+    + + V++ 
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547

Query: 503 CLIDG 507
             I G
Sbjct: 548 AFILG 552



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 9/330 (2%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
             T +I+   + S I+++  LF         P VF  + LI+   R G    A N+F   
Sbjct: 128 VLTQMIRTPYSSSSILDSV-LFWFRNYGGSSPVVF--DILIDSYKRMGMLDEAANVFFVA 184

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            N +         + +  N+++  L K G ++   +++  M D  +  DV TYT ++   
Sbjct: 185 KNDS------ILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGAL 238

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C   D   AKR+ IEM ++G+ P+   +S++++ +C+ G +D+A  L   M  +G+ PNT
Sbjct: 239 CKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNT 298

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           YTY  +  G C   +++ A+  F  M+  G   D  + + LI+ + +  D++E L +   
Sbjct: 299 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 358

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+S GI   ++TYN L  GL +  ++E+A ++   M       ++ T+   I+G C+   
Sbjct: 359 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHN 418

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  ALEL   +       + VSY  +I+GL
Sbjct: 419 MGRALELLDEMEKRNLVPSAVSYGAMINGL 448


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 222/422 (52%), Gaps = 10/422 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           + AL + D M         V    +L GC  +   ++  + ++++L    G  P++ T+ 
Sbjct: 210 DNALDLLDEMPNYGVQADAVCYNALLSGCF-RTGMFEKAMKVWEQLVRDPGASPNLATYK 268

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++++  CK+GR      V  R++ +    + VT+  LI GLC    +  AA +++     
Sbjct: 269 VMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKA 328

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               DV  YN+LI G C  G T  A   ++      G  G+       TYN +  GL   
Sbjct: 329 GLVLDVSVYNSLIKGFCEVGRTGEAWKFWDS----TGFSGI---RQITTYNIMTKGLLDS 381

Query: 267 GFVDKAKELFLKMK-DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G V +A EL  +++ D + +PD VT+ ++I G C     N A  +  +  + G + DV +
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S +++  CK+G+   A+ + + M+  G  PN++ YN LI+G+C   KI+ A K+++ M 
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           SNGC   +++YNTLI+  CK +  +EA SL  EML +G KP + TY +L  GL    +V+
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL+++DE+    +  D   +N  I GLC +G V EA  ++  +++     N+V+YN L+
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621

Query: 506 DG 507
           DG
Sbjct: 622 DG 623



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 202/406 (49%), Gaps = 24/406 (5%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV--------SH 160
           ++ IL   L ++   D+   ++  +  AGL  D+  ++ LI  FC++GR         S 
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLI 219
           GF  + +I          T+  + KGL     + EA  L  +     +C PD  T+ TLI
Sbjct: 361 GFSGIRQI---------TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +GLC  G+   A  + E+  N   E  V       +Y+++I+  CK+G    A E++  M
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVF------SYSSMINRFCKDGRTHDANEVYKNM 465

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             +   P+   Y ++I GFC  +  N+A +++IEM   G  P ++T++ ++D LCK  K 
Sbjct: 466 VKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKY 525

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +AS L + M+ RG  P+  TY +LI G C   K+D A +++  +   G   DV+ +N L
Sbjct: 526 QEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNIL 585

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C    V+EA  +Y EM  K   P +VTYNTL  G +EI  +++A  L+  +  N +
Sbjct: 586 IHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             D  TYN  I GLC      E + L   +  +     +++++ L+
Sbjct: 646 KPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILV 691



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 210/464 (45%), Gaps = 46/464 (9%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF----- 139
           + P+ AL  F  +  +    P V S N L     + + Y    + F  L S G F     
Sbjct: 97  LMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASL-SHGAFGRRIA 155

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T++I++   C  G V     +   + R    P+ VT+++L+ GL    ++  A  L
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDL 215

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +   +  + D   YN L++G  RTG    A+ ++E++    G       PN  TY  +
Sbjct: 216 LDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG-----ASPNLATYKVM 270

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +DGLCK G   +A E++ +M   N   D VTY  +I G C + D + A R++ +M+  G+
Sbjct: 271 LDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGL 330

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV------------------------- 354
             DV  ++ ++   C+ G+  +A +  +   + G+                         
Sbjct: 331 VLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATEL 390

Query: 355 ----------NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
                     +P+  T+ TLI G C     + A ++     ++G   DV SY+++IN +C
Sbjct: 391 LKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFC 450

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+    +A  +Y  M+  G KP    YN L  G   + ++  A+K++ EM  N       
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTII 510

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  IDGLCK+    EA  L + + +  ++ +I +Y  LI GL
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGL 554



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 163/328 (49%), Gaps = 9/328 (2%)

Query: 187 LCAESRIMEAAALFTKHR----VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           L A SR +   A     R    +  C P V ++NTL++   R      A   F  +++G 
Sbjct: 90  LSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG- 148

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
             FG    PN  TYN I+  LC  G VD+A  LF  ++   + PD VTY++++ G    +
Sbjct: 149 -AFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTY 361
             + A  L  EM + GVQ D V ++ ++    + G  +KA ++ E ++   G +PN  TY
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             ++DG C   +   A +++  M +N    D V+Y  LI+  C++ DV+ A  +YS+M+ 
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G+   V  YN+L  G  E+ +   A K +D    + +   T TYN    GL  SG V E
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSE 386

Query: 482 ALELFRAIR-DSKYELNIVSYNCLIDGL 508
           A EL + +  D+    + V++  LI GL
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGL 414



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 12/166 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  L   L ++K  D  L ++  +  AGL  D+  H+ILI+  C  G+V   F +
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC- 223
              +     +PN VT+ +L+ G      I +AA+L+T       +PD+ TYNT I GLC 
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCS 661

Query: 224 --RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             RT   ++ LN  E +A G         P  +T++ ++  + K G
Sbjct: 662 CNRTPEGVLLLN--EVLATG-------IMPTVITWSILVRAVIKYG 698


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 223/425 (52%), Gaps = 23/425 (5%)

Query: 45  YPTTTSKLKESLRLTVK-DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPS 103
           Y      L E L++ +  D A+    L E C++    D        A  IFD M    PS
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD--------AERIFDEM----PS 387

Query: 104 P---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
               P + SF+ L G L+KN   D  L  F+ + +AGL PD   ++ILI  FC+ G +S 
Sbjct: 388 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 447

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              V   +L      + VT+ +++ GLC E  + EA  LFT+       PD +T+ TLIN
Sbjct: 448 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 507

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G  + G+   A+ LFE M   N       KP+ VTYNT+IDG CK   ++K  EL+  M 
Sbjct: 508 GYSKDGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 561

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              I P+ ++Y  +I G+C     +EA RL+ EM+++G +  ++T + I+   C+ G   
Sbjct: 562 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 621

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA   L  M+ +G+ P+  TYNTLI+G+   + +D A  L   ME++G + DV++YN ++
Sbjct: 622 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 681

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHV 459
           N + +   ++EA  +  +M+ +G+ P   TY +L  G    + ++ A ++ DEM +R  V
Sbjct: 682 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 741

Query: 460 AADTY 464
             D +
Sbjct: 742 PDDKF 746



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/415 (33%), Positives = 207/415 (49%), Gaps = 22/415 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ++R +     V +  +  GC A           F+ L S GL   I   + L+   
Sbjct: 186 VFDLLVRTY-----VQARKLREGCEA-----------FRVLKSKGLCVSINACNSLLGGL 229

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K+G V   + +   ++RS    N  T   +I  LC   +I    +  +        PDV
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNTLIN  CR G    A  L + M+ G G      KP   TYN II+GLCK G   +A
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMS-GKG-----LKPCVFTYNAIINGLCKTGKYLRA 343

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K +  +M    ++PD  TY  ++   C  ++  +A+R+F EM  QGV PD+V+FS ++  
Sbjct: 344 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 403

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L KNG +D+A +    M   G+ P+   Y  LI G+C    +  A K+   M   GC+ D
Sbjct: 404 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 463

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+YNT++N  CK K + EA  L++EM  +G+ P   T+ TL  G  +   + +A+ LF+
Sbjct: 464 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 523

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            M + ++  D  TYN  IDG CK   + +  EL+  +   +   N +SY  LI+G
Sbjct: 524 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 213/432 (49%), Gaps = 29/432 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     +    +    L   ++  GL P ++T++ +IN  CK G+      V
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L+   +P+  T+  L+   C    +M+A  +F +       PD+ +++ LI  L +
Sbjct: 347 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406

Query: 225 TGHTIVALNLFEEMANGN------------GEF---GVV--------------CKPNTVT 255
            G    AL  F +M N              G F   GV+              C  + VT
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 466

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNTI++GLCKE  + +A ELF +M +  + PD  T+T++I G+    + N+A  LF  M+
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + ++PDVVT++ ++D  CK  +M+K + L   MI R + PN  +Y  LI+GYC    + 
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 586

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +L+  M   G    +++ NT++  YC+  +  +A    S ML KGI P  +TYNTL 
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +   ++RA  L ++M  + +  D  TYN  ++G  + G + EA  +   + +    
Sbjct: 647 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 706

Query: 496 LNIVSYNCLIDG 507
            +  +Y  LI+G
Sbjct: 707 PDRSTYTSLING 718



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 200/393 (50%), Gaps = 7/393 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D ML++  SP   +++NIL     +N +      +F  + S G+ PD+ + S LI   
Sbjct: 346 VLDEMLKIGMSPD-TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G +         +  +   P+ V +T LI G C    + EA  +  +     C  DV
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNT++NGLC+      A  LF EM     E GV   P+  T+ T+I+G  K+G ++KA
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYSKDGNMNKA 518

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF  M   N+ PDVVTY ++I GFC  ++  +   L+ +M+ + + P+ +++ ++++ 
Sbjct: 519 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C  G + +A RL + M+ +G      T NT++ GYC       A +   +M   G + D
Sbjct: 579 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 638

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            ++YNTLIN + K ++++ A +L ++M + G+ P V+TYN +  G     +++ A  +  
Sbjct: 639 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 698

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           +M    V  D  TY + I+G      + EA  +
Sbjct: 699 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 731



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 142/252 (56%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N+++ GL K G+VD A E++ ++    +  +V T   +I   C        K    +M +
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +GV PDVVT++ +++  C+ G +++A  L++ M  +G+ P  +TYN +I+G C T K   
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+ +   M   G   D  +YN L+   C+N ++ +A  ++ EM S+G+ P +V+++ L  
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 402

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L +   +++ALK F +M+   +A D   Y   I G C++G + EAL++   + +    L
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462

Query: 497 NIVSYNCLIDGL 508
           ++V+YN +++GL
Sbjct: 463 DVVTYNTILNGL 474



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 2/156 (1%)

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G NP    ++ L+  Y    K+    + F  ++S G    + + N+L+    K   V+ A
Sbjct: 181 GSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +Y E++  G++  V T N +   L +  ++E       +M    V  D  TYN  I+ 
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C+ G + EA EL  ++     +  + +YN +I+GL
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGL 334


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 210/429 (48%), Gaps = 12/429 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +P +A       L      P VS+FN L   L +  +   +  LF  +  A + PDI T+
Sbjct: 110 SPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTY 169

Query: 146 SILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTK- 202
            IL+N  CK G V     VL R+    S    + V   +++ GLC   R+ +A     + 
Sbjct: 170 GILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDER 229

Query: 203 -HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +V  C P+  TYN L +  CR G   +A  + E M     + GV   PN +T NTI+ 
Sbjct: 230 MRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERME----KEGVT--PNVITMNTIVG 283

Query: 262 GLCKEGFVDKAKELFLKMKDENINP--DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           GLC+ G V  A + F + +   +    + VTY++++  F + N+   A  LF EM DQG 
Sbjct: 284 GLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGY 343

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD V +  ++  L + G++  A  +   M   G   +   YN LI G+C   ++  A +
Sbjct: 344 PPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQ 403

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF  M+  G   DV +YNTL++  CK  D      L   M+  G +P+VVT+ TL  G  
Sbjct: 404 LFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYC 463

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  + + ALK+F  M    +  +T  YN  ID LCKS  V  A++LF  +R++    N+ 
Sbjct: 464 KAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVT 523

Query: 500 SYNCLIDGL 508
           +YN L+ GL
Sbjct: 524 TYNALLKGL 532



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 159/366 (43%), Gaps = 43/366 (11%)

Query: 95  DYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           + M ++H   P   ++N L     +    D    + +R+   G+ P++ T + ++   C+
Sbjct: 228 ERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCR 287

Query: 155 MGRV----------------SHGFVVLGRILRSCF---------------------TPNA 177
           +GRV                + G  V    L S F                      P+A
Sbjct: 288 VGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDA 347

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           V + ++I GL    R+++A  +    +    + D   YN LI G CR      A  LFEE
Sbjct: 348 VMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEE 407

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M       G   +P+  TYNT++  LCK G      EL   M D+   P VVT+ +++ G
Sbjct: 408 MK------GAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHG 461

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C A   +EA ++F  M +  +QP+ V ++ ++D LCK+ ++D A +L + M    V  N
Sbjct: 462 YCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPAN 521

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             TYN L+ G    +  + A +L   M+   C  D V+ + L+ W  +  + E       
Sbjct: 522 VTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFME 581

Query: 418 EMLSKG 423
           +   KG
Sbjct: 582 QRDEKG 587


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 220/396 (55%), Gaps = 10/396 (2%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L K    D+ LSL + +   G  PD+ THS+LIN  CK  ++      L  + R+  T  
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118

Query: 177 AVTFT--SLIKGLCAESRIMEAAALF-TKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           +  F+  SL+  LC   ++ +A A+F T     +  PDV +Y+ LI+G C+      A  
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L+++M + N      C PN  TYN  ++GL ++G +  A+ ++ +M     +PDV+TY++
Sbjct: 179 LYKQMIDLN------CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I GF  A   ++A  LF  M+ +G +P+ VT++ ++  LCK  K D+A  L   M+ RG
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            +P+  TY TL+ G+C   KI+ A ++F  M S G   DVV+YN L+  + +     EA 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFIDG 472
            L+  M+S+  KP  V++N +  GL +  +++ A+++F+ M ++H  + D  TYN+ I G
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LC    + EA+++F+ I   K   +  ++N L++ +
Sbjct: 413 LCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/371 (35%), Positives = 193/371 (52%), Gaps = 17/371 (4%)

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--- 201
           HS+ I   CK GRV     +L  +++  + P+  T + LI  LC   +I EA        
Sbjct: 53  HSV-IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111

Query: 202 ---KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
                R  +C    F+YN+L+N LC+      A  +F  M +   E  VV  P+ V+Y+ 
Sbjct: 112 RTISTRASSC----FSYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSVV--PDVVSYSI 162

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +IDG CK   + +A++L+ +M D N  P+V TY + + G        +A+ ++ EM+  G
Sbjct: 163 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG 222

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PDV+T+S ++       K D+A  L E MI RG  PN  TYN L+ G C   K D A 
Sbjct: 223 CSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAH 282

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LF  M   GC  D V+Y TL+  +C    +E+A+ ++ EM+SKG  P VV YN L  G 
Sbjct: 283 ELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 342

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELN 497
           F   +   A +LF  M       DT ++N  IDGL K+  + +A+E+F R  +D     +
Sbjct: 343 FRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 402

Query: 498 IVSYNCLIDGL 508
           +V+YN LI GL
Sbjct: 403 LVTYNSLIFGL 413



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 7/315 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  IF  M+      P V S++IL     K         L+K++      P++ T++ 
Sbjct: 138 HQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 197

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +N   + GR++    V   ++ +  +P+ +T+++LI G     +  +A  LF       
Sbjct: 198 FLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG 257

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TYN L++GLC+      A  LF +M     E G  C P+ VTY T++ G C  G
Sbjct: 258 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMV----ERG--CDPDKVTYTTLLYGFCNVG 311

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A E+F +M  +  +PDVV Y  +++GF  A    EA++LF  M+ +  +PD V+ +
Sbjct: 312 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHN 371

Query: 328 VIMDELCKNGKMDKASRLLELMIW-RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++D L K  ++D A  + E M    G +P+  TYN+LI G C   ++  A K+F  ++ 
Sbjct: 372 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 431

Query: 387 NGCMHDVVSYNTLIN 401
                D  ++N L+ 
Sbjct: 432 LKLSPDPHAFNVLLE 446



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 43/334 (12%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            +   + GLC++G    A   FE              P++ T +++I  LCK G VD A 
Sbjct: 13  AWTAFLGGLCKSGKIEQA---FEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM------------------ 315
            L   M      PD+ T++ +I   C A+   EA+  F++ M                  
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-FLQGMNRTISTRASSCFSYNSLL 128

Query: 316 ---------------------DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
                                ++ V PDVV++S+++D  CK  ++ +A +L + MI    
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  TYN  ++G     +I  A+ ++  M S GC  DV++Y+TLI+ +   +  ++A  
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+  M+S+G +P  VTYN L  GL +  + + A +LF +M       D  TY   + G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             G + +A+E+F  +    ++ ++V+YNCL+ G 
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 342



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 30/263 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+++N     L +         +++ + SAG  PD+ T+S LI+ F    +      +
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PNAVT+  L+ GLC ES+  EA  LF K     C+PD  TY TL+ G C 
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 225 TGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTVT 255
            G    A+ +F+EM +   +  VV                             CKP+TV+
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 256 YNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           +N +IDGL K   +D A E+F +M +D   +PD+VTY S+I G C     +EA ++F E+
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429

Query: 315 MDQGVQPDVVTFSVIMDELCKNG 337
               + PD   F+V+++ +   G
Sbjct: 430 DRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 41/298 (13%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV---TYTSVIRGFCYANDWNEAK 308
           N V +   + GLCK G +++A E    M++   +       T  SVI+  C A   + A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE--------------------- 347
            L   M+ +G  PD+ T S++++ELCK  K+ +A   L+                     
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 348 -----------------LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
                            ++  R V P+  +Y+ LIDG+C  D++  A KL+  M    C+
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V +YN  +N   +   + +A  +Y EM+S G  P V+TY+TL  G     + ++A +L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F+ M       +  TYN  + GLCK     EA ELFR + +   + + V+Y  L+ G 
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGF 307



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 4/150 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G  N+    +A+ +FD M+      P V ++N L     +         LF+ + S    
Sbjct: 306 GFCNVGKIEQAVEVFDEMVS-KGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECK 364

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAA 197
           PD  +H+I+I+   K  R+     V  R+ +   C +P+ VT+ SLI GLC E R+ EA 
Sbjct: 365 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC-SPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            +F +       PD   +N L+  +   GH
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 202/388 (52%), Gaps = 7/388 (1%)

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           H+     +F+++ S GL P I T +  ++  CK GR      +   +      P+ V+++
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYS 408

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            L+ G   E R  +   LF          +   +N LI+   + G    A+ +F EM  G
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM-QG 467

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
            G      +P+ VTY+T+I   C+ G +  A E F +M    + P+ V Y S+I GFC  
Sbjct: 468 QG-----VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522

Query: 302 NDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
            D  +AK L  EMM +G+ +P++V FS I+  LC  G++  A  +  L+I  G  P   T
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           +N+LIDGYCL  K++ A  +  +M S G   DVV+YNTL++ YCK+  +++ L L+ EML
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            K +KPT VTY+ +  GLF   +   A K+F EM  +  A D  TY   + GLC++    
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 702

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA+ LF  +     + +I   N +I+ L
Sbjct: 703 EAITLFHKLGAMDCKFDITILNTVINAL 730



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 221/430 (51%), Gaps = 14/430 (3%)

Query: 87  PNEALCIFDYMLRMHPSP--PPVS--SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           P   L +F+ + R    P   P+S  ++ IL  C  + +  D   + F RL  AGL    
Sbjct: 132 PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRT 191

Query: 143 YTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
              +  + C C   R      V+L R+      PNA+++ ++IK LC +SR  EA  +  
Sbjct: 192 IEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQ 251

Query: 202 K--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           +       C PDV ++NT+I+G  + G    A NL  EM     E      P+ VTYN+I
Sbjct: 252 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVE------PDVVTYNSI 305

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +D LCK   +DKA+ +  +M D+ + PD +TYT++I G+  +  W E+ ++F +M  +G+
Sbjct: 306 VDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGL 365

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P +VTF+  M  LCK+G+   A  + + M  +G  P+  +Y+ L+ GY    +      
Sbjct: 366 IPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNN 425

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF SM   G + +   +N LI+ + K   ++EA+ +++EM  +G++P VVTY+TL     
Sbjct: 426 LFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFC 485

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNI 498
            + ++  A++ F +M    +  +T  Y++ I G C  G +++A EL   +        NI
Sbjct: 486 RMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNI 545

Query: 499 VSYNCLIDGL 508
           V ++ +I  L
Sbjct: 546 VFFSSIIHSL 555



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 190/374 (50%), Gaps = 7/374 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNIL    AK    D  + +F  +   G+ PD+ T+S LI+ FC+MGR++       +++
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC-EPDVFTYNTLINGLCRTGHT 228
                PN V + SLI G C    +++A  L ++        P++  ++++I+ LC  G  
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A ++F      N    +  +P  VT+N++IDG C  G ++KA  +   M    I PDV
Sbjct: 562 MDAHDVF------NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 615

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY +++ G+C +   ++   LF EM+ + V+P  VT+S+++D L   G+   A ++   
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           MI  G   +  TY  L+ G C  D  D A  LF  + +  C  D+   NT+IN   K + 
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRR 735

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  L++ + + G+ P V TY  +   L +   VE A  +F  M ++  A  +   N+
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 795

Query: 469 FIDGLCKSGFVLEA 482
            I  L + G +++A
Sbjct: 796 IIRMLLQKGDIVKA 809



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 197/400 (49%), Gaps = 6/400 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IF YM      P  VS ++IL    A    +  + +LF  +   G+  + +  +ILI+  
Sbjct: 391 IFQYMTTKGHMPDLVS-YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G +    +V   +      P+ VT+++LI   C   R+ +A   F++      EP+ 
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y++LI+G C  G  + A  L  EM +       + +PN V +++II  LC EG V  A
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKG-----IPRPNIVFFSSIIHSLCNEGRVMDA 564

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++F  +      P +VT+ S+I G+C      +A  +   M+  G++PDVVT++ ++  
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSG 624

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK+GK+D    L   M+ + V P T TY+ ++DG     +   A+K+F  M  +G   D
Sbjct: 625 YCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVD 684

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y  L+   C+N   +EA++L+ ++ +   K  +   NT+   L+++ + E A  LF 
Sbjct: 685 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFA 744

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +  + +  +  TY   I  L K G V EA  +F ++  S
Sbjct: 745 AISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 106/271 (39%), Gaps = 29/271 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L          +    +   + S G+ PD+ T++ L++ +CK G++  G ++
Sbjct: 578 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLIL 637

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P  VT++ ++ GL    R   A  +F +        D+ TY  L+ GLCR
Sbjct: 638 FREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 697

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTVT 255
              T  A+ LF ++   + +F +                                PN  T
Sbjct: 698 NDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVST 757

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  +I  L KEG V++A  +F  M+     P       +IR      D  +A     ++ 
Sbjct: 758 YGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 817

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
              +  +  T S++M      GK  +  + L
Sbjct: 818 GTIISLEASTTSLLMSLFSSKGKHREQIKFL 848


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/404 (34%), Positives = 211/404 (52%), Gaps = 10/404 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N +   LA+N+    V  LF+ L +    P+++T +I+I+  CK G +     
Sbjct: 165 PPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARA 220

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  R+     +P+ VT+ SLI G      + E   L ++ R   C  DV TYN LIN   
Sbjct: 221 LFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFS 280

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A + F EM       GV+   N VT +T +D  CKEG V +A +LF +M+   
Sbjct: 281 KFGWIEKAYSYFGEMK----RLGVMA--NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+  TYTS++ G C A   ++A  L  EM+ QG+ P+VVT++V++D LCK GK+  A 
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVAD 394

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L LM   GV  N   Y TLI G+ +    + A  L   M++ G   DV  Y TLI   
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL 454

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK + ++EA SL  +M   G++P  V Y T+    F+  +   A+ L  ++  + +  + 
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            TY   IDGLCK+G + EA+  F  +R+   + N+  Y  LIDG
Sbjct: 515 VTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDG 558



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 208/419 (49%), Gaps = 7/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M  M  SP  V ++N L     K    + V  L   +  +G   D+ T++ L
Sbjct: 217 EARALFVRMKAMGCSPD-VVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNAL 275

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCF K G +   +   G + R     N VT ++ +   C E  + EA  LF + RV   
Sbjct: 276 INCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGM 335

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+ FTY +L++G C+ G    A+ L +EM +     G+V  PN VTY  ++DGLCKEG 
Sbjct: 336 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVVTYTVMVDGLCKEGK 389

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V  A ++   M+   +  + + YT++I G     +   A  L  EM ++G++ DV  +  
Sbjct: 390 VAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGT 449

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK  K+D+A  LL  M   G+ PNT  Y T++D +    K   A  L   +  +G
Sbjct: 450 LIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +VV+Y  LI+  CK   + EA+S + +M   G+ P V  Y TL  G  +I  + +A+
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAV 569

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            L +EM    ++ D   Y + IDG  K G +  A  L   + ++  +L++  Y C I G
Sbjct: 570 HLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISG 628



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 216/429 (50%), Gaps = 19/429 (4%)

Query: 87  PNEALCIFDYMLRM------HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           P+ A  + D + R       H S  P S F+ L   LA +   D  +    R+    + P
Sbjct: 108 PHLAASLVDILHRAALALGPHRSALP-SVFDTLLSLLADHGLLDDAVRALARVRQLRVPP 166

Query: 141 DIYT-HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           +  T + IL+    ++ R   G +V  R+      PN  TF  +I  LC +  ++EA AL
Sbjct: 167 NTRTCNHILL----RLARNRQGGLVR-RLFEHLPAPNVFTFNIVIDFLCKQGELVEARAL 221

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F + +   C PDV TYN+LI+G  + G       L  EM          C  + VTYN +
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSG------CAADVVTYNAL 275

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+   K G+++KA   F +MK   +  +VVT ++ +  FC      EA +LF +M  +G+
Sbjct: 276 INCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGM 335

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+  T++ ++D  CK G++D A  LL+ M+ +G+ PN  TY  ++DG C   K+  A  
Sbjct: 336 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADD 395

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +   ME  G   + + Y TLI+ +  NK+ E AL L +EM +KG++  V  Y TL  GL 
Sbjct: 396 VLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLC 455

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           ++ +++ A  L  +M    +  +T  Y   +D   K+G   EA+ L   I DS  + N+V
Sbjct: 456 KVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVV 515

Query: 500 SYNCLIDGL 508
           +Y  LIDGL
Sbjct: 516 TYCALIDGL 524



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 180/359 (50%), Gaps = 6/359 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           + LF ++   G+ P+ +T++ L++  CK GR+    V+L  ++     PN VT+T ++ G
Sbjct: 324 MKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDG 383

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC E ++  A  + +       + +   Y TLI+G     ++  AL+L  EM N   E  
Sbjct: 384 LCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELD 443

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
           V        Y T+I GLCK   +D+AK L  KM D  + P+ V YT+++  F  A   +E
Sbjct: 444 VS------LYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  L  ++ D G+QP+VVT+  ++D LCK G + +A    + M   G++PN   Y TLID
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    +  A  L   M   G   D V Y +LI+ + K  D++ A +L ++M+  G++ 
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            +  Y     G   ++ ++ A  +  EM    +  D   YN  I    K G + EA  L
Sbjct: 618 DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 212/439 (48%), Gaps = 41/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N++ G L +    D    L K ++  GL  D++T+SILI+ F K  R +   ++
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P  V +T+LI G   +    EA  +  +      + ++FTYN L+ G+C+
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT-------------------------- 258
            G    A  L  EM        V  KP+T TYN                           
Sbjct: 389 FGDMEKADALLNEM------IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL 442

Query: 259 ---------IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
                    II+GLC+ G ++ A  +F  M    + P+ V YT++I+G      + EA R
Sbjct: 443 VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVR 502

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +   M  +GVQPDV+ ++ ++  LCK+ KM++A   L  MI RG+ PN YTY  LI GYC
Sbjct: 503 ILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYC 562

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            + ++  A + F  M   G   + V    LI+ YCK     EA S++  ML + + P V 
Sbjct: 563 KSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVR 622

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+ L  GL    +++ A++L  E     +  D +TYN+ I G CK G + +A +L   +
Sbjct: 623 TYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYM 682

Query: 490 RDSKYELNIVSYNCLIDGL 508
                  NI++YN LI+GL
Sbjct: 683 CQKGISPNIITYNALINGL 701



 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 211/472 (44%), Gaps = 75/472 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N +     K ++   V  L   +  + L P  YT  ++IN  C+ G +     V
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT----------------------K 202
              ++     PNAV +T+LIKG   E R  EA  +                        K
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 203 HRVF-------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            R                 +P+V+TY  LI+G C++G   VA   F+EM       G   
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM------LGCGI 582

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN V    +IDG CKEG   +A  +F  M   +++PDV TY+++I G         A  
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAME 642

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  E +++G+ PDV T++ I+   CK G + KA +L E M  +G++PN  TYN LI+G C
Sbjct: 643 LLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLC 702

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +I+ AR+LF  +   G  H+ V+Y T+I+ YCK+ ++ +A  L+ EM  KG+ P   
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762

Query: 430 TYNTLFLGLFEIHQVERALKLF----------------------------------DEMR 455
            Y+ L  G  +    E+AL LF                                  ++M 
Sbjct: 763 VYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMV 822

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             HV  D  TY   ID  CK+GF+ EA + F  ++      N ++Y  L+ G
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG 874



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 201/399 (50%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L   + K    +   +L   +   G+ PD  T++ +I  + K    S    +L  +
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +S   P A T   +I GLC    I +A+ +F        +P+   Y TLI G  + G  
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ + + M           +P+ + YN++I GLCK   +++AK+  ++M +  + P+V
Sbjct: 498 QEAVRILKVMDKKG------VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY ++I G+C + +   A R F EM+  G+ P+ V  + ++D  CK G   +A+ +   
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ R V+P+  TY+ LI G     K+  A +L       G + DV +YN++I+ +CK   
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           + +A  L+  M  KGI P ++TYN L  GL +  ++ERA +LFD +    +A +  TY  
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            IDG CKSG + +A  LF  +       +   Y+ LIDG
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 185/381 (48%), Gaps = 8/381 (2%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L   +   G  P + T++++I   C+ G V   F +   + +     +  T++ LI G  
Sbjct: 258 LLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGV 247
            + R  EA  +  +      +P    Y  LI+G  R G +  A  + EEM A G      
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARG------ 371

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
             K N  TYN ++ G+CK G ++KA  L  +M    I PD  TY ++I G+    + +  
Sbjct: 372 -VKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           K L  EM    + P   T  +I++ LC++G ++ ASR+ E+M+  GV PN   Y TLI G
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +    +   A ++   M+  G   DV+ YN++I   CK++ +EEA     EM+ +G+KP 
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V TY  L  G  +  +++ A + F EM    +A +       IDG CK G   EA  +FR
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR 610

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +       ++ +Y+ LI GL
Sbjct: 611 CMLGRSVHPDVRTYSALIHGL 631



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 210/447 (46%), Gaps = 42/447 (9%)

Query: 95  DYMLRM--HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           DY++ M      P V ++  L     K+         FK +   G+ P+    + LI+ +
Sbjct: 537 DYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G  +    +   +L     P+  T+++LI GL    ++  A  L ++       PDV
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FTYN++I+G C+ G    A  L E M            PN +TYN +I+GLCK G +++A
Sbjct: 657 FTYNSIISGFCKQGGIGKAFQLHEYMCQKG------ISPNIITYNALINGLCKAGEIERA 710

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI--- 329
           +ELF  +  + +  + VTY ++I G+C + + ++A RLF EM  +GV PD   +S +   
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770

Query: 330 -------------------------------MDELCKNGKMDKASRLLELMIWRGVNPNT 358
                                          MD  CK+GK+ +A++LLE M+ + V P+ 
Sbjct: 771 CRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH 830

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY  LID +C T  +  A + FV M+    M + ++Y  L++ Y       E  +L+ E
Sbjct: 831 VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M++K I+P  VT++ +     +     + LKL D+M +          +  ID LC+   
Sbjct: 891 MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEH 950

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLI 505
           V E L++   I +    L++ + + L+
Sbjct: 951 VSEVLKVLEKIEEQGLNLSLATCSTLV 977



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 187/398 (46%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F +L     K   +D  +S F      G    +   + L++   K  ++   +     +L
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +    +  T+T LI          E   L  +     C P + TYN +I GLCR G   
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L + M       G+V   +  TY+ +IDG  K+    +AK +  +M  + + P  V
Sbjct: 289 EAFELKKLMDKK----GLV--ADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            YT++I GF    D  EA R+  EM+ +GV+ ++ T++ ++  +CK G M+KA  LL  M
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G+ P+T TYN +I+GY         + L   M+ +  +    +   +IN  C++  +
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A  ++  M+S G+KP  V Y TL  G  +  + + A+++   M +  V  D   YN+ 
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           I GLCKS  + EA +    + +   + N+ +Y  LI G
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 197/418 (47%), Gaps = 15/418 (3%)

Query: 86   TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
            +  EA  IF  ML      P V +++ L   L +N      + L       GL PD++T+
Sbjct: 601  STTEATSIFRCMLG-RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTY 659

Query: 146  SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
            + +I+ FCK G +   F +   + +   +PN +T+ +LI GLC    I  A  LF     
Sbjct: 660  NSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPG 719

Query: 206  FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                 +  TY T+I+G C++G+   A  LF+EM            P++  Y+ +IDG  K
Sbjct: 720  KGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG------VPPDSFVYSALIDGCRK 773

Query: 266  EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            EG  +KA  LFL+   +       +  +++ GFC +    EA +L  +M+D+ V+PD VT
Sbjct: 774  EGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVT 832

Query: 326  FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            +++++D  CK G + +A +    M  R + PN  TY  L+ GY +  +      LF  M 
Sbjct: 833  YTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMI 892

Query: 386  SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +     D V+++ +I+ + K  D  + L L  +ML KG   +    + L   L     V 
Sbjct: 893  AKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVS 952

Query: 446  RALKLFDEMRRNHVAADTYTYNNFIDGLCKSG------FVLEALELFRAIRDSKYELN 497
              LK+ +++    +     T +  +    K+G       VL+++  F+ + DS  ELN
Sbjct: 953  EVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDST-ELN 1009



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 177/364 (48%), Gaps = 20/364 (5%)

Query: 74   CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
            CK  G G        +A  + +YM +   SP  ++ +N L   L K    +    LF  +
Sbjct: 667  CKQGGIG--------KAFQLHEYMCQKGISPNIIT-YNALINGLCKAGEIERARELFDGI 717

Query: 134  NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
               GL  +  T++ +I+ +CK G +S  F +   +      P++  +++LI G   E   
Sbjct: 718  PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNT 777

Query: 194  MEAAALFTK--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
             +A +LF +   + FA      + N L++G C++G  I A  L E+M + +       KP
Sbjct: 778  EKALSLFLESVQKGFASTS---SLNALMDGFCKSGKVIEANQLLEDMVDKH------VKP 828

Query: 252  NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
            + VTY  +ID  CK GF+ +A++ F+ M+  N+ P+ +TYT+++ G+  A   +E   LF
Sbjct: 829  DHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALF 888

Query: 312  IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             EM+ + ++PD VT+SV++D   K G   K  +L++ M+ +G N +    + LID  C  
Sbjct: 889  DEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRK 948

Query: 372  DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            + +    K+   +E  G    + + +TL+  + K   ++ A  +   M+     P     
Sbjct: 949  EHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTEL 1008

Query: 432  NTLF 435
            N L 
Sbjct: 1009 NDLI 1012



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 39/292 (13%)

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMK--------------------------------- 280
           V +  +IDG  K+G  D+A   FL  K                                 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 281 --DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             + N+  DV TYT +I     A +  E KRL  EM ++G  P +VT++V++  LC+ G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A  L +LM  +G+  + +TY+ LIDG+    +   A+ +   M S G     V+Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI+ + +  D  EA  +  EML++G+K  + TYN L  G+ +   +E+A  L +EM    
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC--LIDGL 508
           +  DT TYNN I+G  K        +L   ++ S   L   +Y C  +I+GL
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS--NLVPTAYTCGMIINGL 456



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 34/335 (10%)

Query: 34   PTSSISENEPSYPT------TTSKLKESLRLTVKDRASLKKF---------LKERCKSSG 78
            P   ++ N  +Y T       +  L ++ RL   D  +LK           L + C+  G
Sbjct: 718  PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF--DEMTLKGVPPDSFVYSALIDGCRKEG 775

Query: 79   QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
              +       +AL +F  +  +       SS N L     K+        L + +    +
Sbjct: 776  NTE-------KALSLF--LESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 139  FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             PD  T++ILI+  CK G +         + +    PNA+T+T+L+ G     R  E  A
Sbjct: 827  KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886

Query: 199  LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV-VCKPNTVTYN 257
            LF +      EPD  T++ +I+   + G  +  L L ++M    G     VC       +
Sbjct: 887  LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC-------H 939

Query: 258  TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
             +ID LC++  V +  ++  K++++ +N  + T ++++R F  A   + A R+   M+  
Sbjct: 940  VLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRF 999

Query: 318  GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
               PD    + +++    +   + A   L+ M W 
Sbjct: 1000 KWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWE 1034


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 214/421 (50%), Gaps = 10/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F+ ML M    P   ++N+L     K+        L   + +  L P  +T+S+L
Sbjct: 399 KAMSLFNEML-MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C    +     VL +++R+   PN   + +LIK    ESR   A  L         
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+F YN LI GLCR      A  L  +M    GE G+  KPN  TY   I+   K G 
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDM----GEKGI--KPNAHTYGAFINLYSKSGE 571

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A+  F  M    I P+ V YT +I+G C   +  EA   F  M+++G+ PD+  +S 
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  L KNGK  +A  +    +  GV P+ + YN+LI G+C    I+ A +L+  M  NG
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 389 CMHDVVSYNTLIN--WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
              ++V YNTLIN   YCK+ ++ EA  L+ EM+SKGI P    Y  L  G  +   +E+
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 751

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL LF E ++  V + +  +N+ ID  CK G V+EA ELF  + D K   NIV+Y  LID
Sbjct: 752 ALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 810

Query: 507 G 507
            
Sbjct: 811 A 811



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N   G L +    D  L + K +   GL PD +T+++L++ FCK  R     ++
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  S   PN  T+T+LI G   E  I EA  +  +      + +V TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++LF EM     E      P+T TYN +IDG  K   + KA EL  +MK   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGIE------PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TY+ +I G C+++D  +A  +  +M+  GV+P+V  +  ++    +  + + A  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL++MI  GV P+ + YN LI G C   K++ A+ L V M   G   +  +Y   IN Y 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ +++ A   + +MLS GI P  V Y  L  G  ++     AL  F  M    +  D  
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            Y+  I  L K+G   EA+ +F     +    ++  YN LI G
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 191/383 (49%), Gaps = 15/383 (3%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           ++  +  A + PD+YT++ +I   CK+G V  G +VL  + + C  PN  T+ + I GLC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLC 287

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               + EA  +          PD  TY  L++G C+   +  A  +FE M +        
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG------ 341

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----DVVTYTSVIRGFCYANDW 304
             PN  TY  +IDG  KEG +++A    L++KDE I      +VVTY ++I G   A + 
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEA----LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A  LF EM+  G++PD  T+++++D   K+  M KA  LL  M  R + P+ +TY+ L
Sbjct: 398 AKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I G C +  +  A ++   M  NG   +V  Y TLI  Y +    E A+ L   M++ G+
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P +  YN L +GL    +VE A  L  +M    +  + +TY  FI+   KSG +  A  
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
            F+ +  S    N V Y  LI G
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKG 600



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 185/370 (50%), Gaps = 8/370 (2%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+++T++  I   C+ G V     V   ++     P+  T+T L+ G C + R  EA  +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F         P+ FTY  LI+G  + G+   AL + +EM           K N VTYN +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG------LKLNVVTYNAM 387

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I G+ K G + KA  LF +M    I PD  TY  +I G+  ++D  +A  L  EM  + +
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P   T+SV++  LC +  + KA+ +L+ MI  GV PN + Y TLI  Y    + + A +
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M +NG + D+  YN LI   C+ K VEEA  L  +M  KGIKP   TY   F+ L+
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA-FINLY 566

Query: 440 -EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +  +++ A + F +M  + +  +   Y   I G C  G  +EAL  F+ + +     +I
Sbjct: 567 SKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626

Query: 499 VSYNCLIDGL 508
            +Y+ +I  L
Sbjct: 627 RAYSAIIHSL 636



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 9/384 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L + K  +    L   +   G+ P+ +T+   IN + K G +      
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L S   PN V +T LIKG C     +EA + F         PD+  Y+ +I+ L +
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A+ +F +      + GVV  P+   YN++I G CKEG ++KA +L+ +M    I
Sbjct: 639 NGKTKEAMGVFLKFL----KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 285 NPDVVTYTSVIR--GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           NP++V Y ++I   G+C + +  EA +LF EM+ +G+ PD   + +++D   K G ++KA
Sbjct: 693 NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L      + V  +   +N+LID +C   K+  AR+LF  M       ++V+Y  LI+ 
Sbjct: 753 LSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           Y K + +EEA  L+ +M ++ I P  +TY +L L   +I    + + LF +M    +A D
Sbjct: 812 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 871

Query: 463 TYTYNNFIDGLCKSGFVLEALELF 486
              Y       CK G  LEAL+L 
Sbjct: 872 AIAYGVMASAYCKEGKSLEALKLL 895



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 197/379 (51%), Gaps = 7/379 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           S+F    S G FP +   + L+    K   +   + V G ++ +   P+  T+T++IK  
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    +++   + ++     C+P++FTYN  I GLC+TG    AL + + M     E G+
Sbjct: 253 CKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL 307

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P+  TY  ++DG CK+    +AK +F  M    +NP+  TYT++I GF    +  EA
Sbjct: 308 --GPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            R+  EM+ +G++ +VVT++ ++  + K G+M KA  L   M+  G+ P+T+TYN LIDG
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y  +  +  A +L   M++        +Y+ LI+  C + D+++A  +  +M+  G+KP 
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V  Y TL     +  + E A++L   M  N V  D + YN  I GLC++  V EA  L  
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV 545

Query: 488 AIRDSKYELNIVSYNCLID 506
            + +   + N  +Y   I+
Sbjct: 546 DMGEKGIKPNAHTYGAFIN 564



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 203/414 (49%), Gaps = 10/414 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+R +   P V  +  L     +   Y+  + L K + + G+ PD++ ++ LI   
Sbjct: 473 VLDQMIR-NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+  +V    ++L  +      PNA T+ + I        I  A   F         P+ 
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y  LI G C  G+T+ AL+ F+ M     E G++  P+   Y+ II  L K G   +A
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCML----EKGLI--PDIRAYSAIIHSLSKNGKTKEA 645

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +FLK     + PDV  Y S+I GFC   D  +A +L+ EM+  G+ P++V ++ ++++
Sbjct: 646 MGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIND 705

Query: 333 L--CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
              CK+G + +A +L + MI +G++P+ Y Y  LIDG      ++ A  LF   +    +
Sbjct: 706 YGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-V 764

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
             + ++N+LI+ +CK+  V EA  L+ +M+ K + P +VTY  L     +   +E A +L
Sbjct: 765 GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           F +M   ++  +T TY + +    + G   + + LF+ +       + ++Y  +
Sbjct: 825 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVM 878



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 193/387 (49%), Gaps = 15/387 (3%)

Query: 111 NILFGCLAKNKHYDT-----VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           N+++  L K  H D       LS FK +   GL PDI  +S +I+   K G+      V 
Sbjct: 591 NVIYTILIKG-HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN--GLC 223
            + L++   P+   + SLI G C E  I +A+ L+ +       P++  YNTLIN  G C
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           ++G+   A  LF+EM +          P+   Y  +IDG  KEG ++KA  LF + + ++
Sbjct: 710 KSGNLTEAFKLFDEMISKG------ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 763

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +   +  + S+I  FC      EA+ LF +M+D+ + P++VT+++++D   K   M++A 
Sbjct: 764 VG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 822

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L   M  R + PNT TY +L+  Y           LF  ME+ G   D ++Y  + + Y
Sbjct: 823 QLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAY 882

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK     EAL L ++ L +GIK     ++ L   L +  Q+   L+L  EM +  ++  +
Sbjct: 883 CKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 942

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIR 490
            T N  + G  KSG   EA ++   ++
Sbjct: 943 KTCNTLLLGFYKSGNEDEASKVLGVMQ 969



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV+TY  +I   C+ G  I    +  EM          CKPN  TYN  I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A E+   M ++ + PD  TYT ++ GFC      EAK +F  M   G+ P+  T++ +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K G +++A R+ + MI RG+  N  TYN +I G     ++  A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D  +YN LI+ Y K+ D+ +A  L +EM ++ + P+  TY+ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + D+M RN V  + + Y   I    +      A+EL + +  +    ++  YNCLI GL
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 10/370 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL  F  ML      P + +++ +   L+KN      + +F +    G+ PD++ ++ L
Sbjct: 609 EALSTFKCMLE-KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK--GLCAESRIMEAAALFTKHRVF 206
           I+ FCK G +     +   +L +   PN V + +LI   G C    + EA  LF +    
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD + Y  LI+G  + G+   AL+LF E    +         +   +N++ID  CK 
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-------VGSLSAFNSLIDSFCKH 780

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V +A+ELF  M D+ + P++VTYT +I  +  A    EA++LF++M  + + P+ +T+
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 840

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++    + G   K   L + M  RG+  +   Y  +   YC   K   A KL      
Sbjct: 841 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   +   ++ LI   CK K +   L L SEM  + +  +  T NTL LG ++    + 
Sbjct: 901 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 960

Query: 447 ALKLFDEMRR 456
           A K+   M+R
Sbjct: 961 ASKVLGVMQR 970



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 53/344 (15%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNG--------------EFGVVCKPNTVTYNTI 259
           +Y+ L   LC +G    A N+ E++                   EFG     N   ++  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFG---GSNLTVFDIF 178

Query: 260 IDGLCKEGFVDKAKELFL-----------------------------------KMKDENI 284
           ID     GF+++A  +F+                                    M +  I
Sbjct: 179 IDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI 238

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV TYT+VI+  C   D  + K +  E M++  +P++ T++  +  LC+ G +D+A  
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + +LM+ +G+ P+ +TY  L+DG+C   +   A+ +F SM S+G   +  +Y  LI+ + 
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  ++EEAL +  EM+++G+K  VVTYN +  G+ +  ++ +A+ LF+EM    +  DT+
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  IDG  KS  + +A EL   ++  K   +  +Y+ LI GL
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 226/417 (54%), Gaps = 7/417 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D +++   + P ++++N++   L K   +  V  +++R+ +  L PD+ T+ ILI+  
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G V     V   I+++    +A  + SL+KG C   R+ EA   F     FA   ++
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNL 368

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN +I GL  +G    A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +KA
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKA 423

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F + +      DV +Y+S+I G C      +A +++ +M   G +P+   ++ ++  
Sbjct: 424 FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+  +   A R+   M   G +P   TYNTLIDG C  +K   A  +   M  NG   D
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y +LI     +K +++ALS++ ++L KG+K  V+ +N L  GL    +V+ AL +F 
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603

Query: 453 EMR-RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +M+ + +   +  TYN  +DGL ++G++ +A  L+ +I +   E +I+SYN  I GL
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 219/424 (51%), Gaps = 11/424 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           + AL + D M R    P  V  +N L G   K   ++ V+ ++ +L    G  P++ T++
Sbjct: 210 DHALDLLDEMPRSRVQPD-VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++++  CK GR      V  R++ +   P+ +T+  LI GLC    +  AA ++++    
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               D   YN+L+ G C+ G    A   ++         G     N  TYN +I GL   
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDS 381

Query: 267 GFVDKAKELF-LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G VD+A EL+ L  KD    PD VT+ ++I G C     N+A  +F E    G Q DV +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S +++ LC  G++  A ++ E M   G  PN++ YN LI G+C   +   A +++  M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            NGC   V++YNTLI+  CK +  +EA S+  EM+  G  P + TY +L  GLF   +++
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNIVSYNCL 504
            AL ++ ++    +  D   +N  I GLC +G V EAL +F  +++ K    N+V+YN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 505 IDGL 508
           +DGL
Sbjct: 622 MDGL 625



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 218/429 (50%), Gaps = 11/429 (2%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG----LFP 140
           I P+ AL  F  +  +    P + S N L     + + +    + F  L+       + P
Sbjct: 97  IMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAP 156

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           ++ T++I++   C  G +     +   + R    P+ +T+++L+ GL  + R+  A  L 
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLL 216

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +      +PDV  YN L+ G  + G     + +++++    G      +PN  TYN ++
Sbjct: 217 DEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG-----ARPNLATYNVML 271

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DGLCK G   +  E++ +M   N+ PDV+TY  +I G C + D + A R++ E++  G+ 
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            D   ++ ++   C+ G++ +A +  +   + G+  N  TYN +I G   +  +D A +L
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390

Query: 381 FVSMESN-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +  +E +  C+ D V++ TLI+  C+N    +A +++ E    G +  V +Y+++  GL 
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
            + ++  A+K++++M ++    +++ YN  I G C+     +A+ ++  + D+     ++
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 500 SYNCLIDGL 508
           +YN LIDGL
Sbjct: 511 TYNTLIDGL 519



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 199/410 (48%), Gaps = 44/410 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV------ 158
           P V ++ IL   L ++   D    ++  +   GL  D   ++ L+  FC+ GRV      
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 159 --SHGFVVLGRILRS----------------------------CFTPNAVTFTSLIKGLC 188
             S GF  L R LR+                               P+ VTF +LI GLC
Sbjct: 357 WDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                 +A  +F + RV   + DVF+Y+++INGLC  G  + A+ ++E+M          
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG------ 469

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKPN+  YN +I G C+      A  ++ KM D   +P V+TY ++I G C A  + EA 
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  EM++ G  PD+ T+  ++  L  + K+D A  + + ++++G+  +   +N LI G 
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589

Query: 369 CLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           C   K+D A  +F  M E   C  ++V+YNTL++   +   +++A +L++ +   G++P 
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +++YNT   GL    ++   ++L DE+    +     T+N  +  + K G
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 165/324 (50%), Gaps = 7/324 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ ++D + +     P   +F  L   L +N   +   ++F+    +G   D++++S 
Sbjct: 385 DEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  C +GR+     V  ++ +    PN+  + +LI G C   R  +A  +++K     
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TYNTLI+GLC+      A ++  EM   NG       P+  TY ++I GL  + 
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVE-NG-----FTPDITTYGSLIRGLFSDK 558

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTF 326
            +D A  ++ ++  + +  DV+ +  +I G C A   +EA  +F +M ++    P++VT+
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + +MD L + G +DKA+ L   +   G+ P+  +YNT I G C  D+I    +L   + S
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 387 NGCMHDVVSYNTLINWYCKNKDVE 410
            G +  V+++N L+    K   ++
Sbjct: 679 RGIIPTVITWNILVRAVIKYGPIQ 702


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 221/432 (51%), Gaps = 22/432 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F  M+      P   +F IL   L ++   +    L  R+   G  PD   ++ 
Sbjct: 24  DKASAVFQEMID-KSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNA 82

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ + K       F  L  ++++   P  VT+T+++ GLC   R  +A  L  + R   
Sbjct: 83  LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+++TYN ++ GLC       A  + EEMA   G F     P+ VTYN+ I GLCK  
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV-RGYF-----PDVVTYNSFIKGLCKCD 196

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A++   +M    + PDVV+YT+VI G C + D + A R+   M ++G  PDVVT+S
Sbjct: 197 RVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYS 253

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK G++++A  LL+ M+  G  PN   YN+L+        I  A  + V ME  
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 313

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL----------G 437
           G   DVVSYN  I+  CK + V++A +++  M+ +G  P   +Y+ L +          G
Sbjct: 314 GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDG 373

Query: 438 LFEIHQVERALKLFDEMRRNHVA-ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           L +  + + A  LF ++    +   D + YN  +D  CK   + +AL++ + + + K   
Sbjct: 374 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-KNCC 432

Query: 497 NIVSYNCLIDGL 508
           N+V++N L+ GL
Sbjct: 433 NVVTWNILVHGL 444



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 212/411 (51%), Gaps = 20/411 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N L   L +   +D   ++F+ +      PD +T +IL+   C+  ++     +LG
Sbjct: 7   VFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLG 66

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+      P+   + +LI G        +A     +     C P V TY  +++GLC+  
Sbjct: 67  RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAE 126

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            T  A+ L +EM +        C PN  TYN I++GLC+E  +D+AK++  +M      P
Sbjct: 127 RTRDAVKLLDEMRDKG------CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DVVTY S I+G C  +  +EA++    M    V PDVV+++ +++ LCK+G +D ASR+L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  RG  P+  TY++LIDG+C   +++ A  L  SM   GC  ++V+YN+L+    + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR---------- 456
             + +A  +  EM  +G  P VV+YN    GL +  +V++A  +FD M            
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNIVSYNCLID 506
           + +  D   Y   +DGLCK G   EA  LF  + D K  E ++  YN ++D
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 210/423 (49%), Gaps = 22/423 (5%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M++ H  P  V+  NI+ G     +  D V  L   +   G  P+IYT+++++   C+  
Sbjct: 103 MVKNHCLPTVVTYTNIVDGLCKAERTRDAV-KLLDEMRDKGCSPNIYTYNVIVEGLCEER 161

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           ++     +L  +    + P+ VT+ S IKGLC   R+ EA     +  V    PDV +Y 
Sbjct: 162 KLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYT 218

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           T+INGLC++G    A  + + M+N        C P+ VTY+++IDG CK G V++A  L 
Sbjct: 219 TVINGLCKSGDLDSASRMLDHMSNRG------CTPDVVTYSSLIDGFCKGGEVERAMGLL 272

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M      P++V Y S++          +A+ + +EM  +G  PDVV+++  +D LCK 
Sbjct: 273 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 332

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLI----------DGYCLTDKIDHARKLFVS-ME 385
            ++ KA  + + M+ RG  PN  +Y+ LI          DG C   + D A  LF   ++
Sbjct: 333 ERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLD 392

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
              C  DV  YN +++ +CK + +++AL ++ +ML K     VVT+N L  GL    ++ 
Sbjct: 393 EKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLS 451

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A  +   M       D  TY   +D +CK G    ALELF          ++V+Y+ LI
Sbjct: 452 DAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 511

Query: 506 DGL 508
            GL
Sbjct: 512 TGL 514



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 195/382 (51%), Gaps = 19/382 (4%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G   +++T++ L+    +  R      V   ++     P+A TF  L++GLC  +++ +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L  + +   C PD   YN LI+G  +      A     EM   +      C P  VTY
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH------CLPTVVTY 115

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
             I+DGLCK      A +L  +M+D+  +P++ TY  ++ G C     +EAK++  EM  
Sbjct: 116 TNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV 175

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G  PDVVT++  +  LCK  ++D+A + L  M    V P+  +Y T+I+G C +  +D 
Sbjct: 176 RGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDS 232

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A ++   M + GC  DVV+Y++LI+ +CK  +VE A+ L   ML  G +P +V YN+L  
Sbjct: 233 ASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 292

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD----- 491
            L  +  + +A  +  EM R     D  +YN  IDGLCK+  V +A  +F  + +     
Sbjct: 293 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352

Query: 492 --SKYELNIVS---YNCLIDGL 508
             S Y + IV    Y  L+DGL
Sbjct: 353 NASSYSMLIVDILLYTVLLDGL 374



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 213/418 (50%), Gaps = 24/418 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ + D M R     P + ++N++   L + +  D    + + +   G FPD+ T++  
Sbjct: 130 DAVKLLDEM-RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   CK  RV      L R+     TP+ V++T++I GLC    +  A+ +        C
Sbjct: 189 IKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGC 245

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TY++LI+G C+ G    A+ L + M        + C+PN V YN+++  L + G 
Sbjct: 246 TPDVVTYSSLIDGFCKGGEVERAMGLLDSM------LKLGCRPNMVAYNSLLGALHRLGH 299

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP------- 321
           + KA+++ ++M+     PDVV+Y + I G C A    +AK +F  M+++G  P       
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359

Query: 322 ---DVVTFSVIMDELCKNGKMDKASRLLELMIWRGV-NPNTYTYNTLIDGYCLTDKIDHA 377
              D++ ++V++D LCK G+ D+A  L   ++   +  P+ + YN ++D +C   +ID A
Sbjct: 360 LIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 419

Query: 378 RKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            ++   M E N C  +VV++N L++  C +  + +A ++   M+ +G  P  VTY TL  
Sbjct: 420 LQIHKQMLEKNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVD 477

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            + +  +   AL+LF+E  +     D  TY+  I GL       EA  LF  + + ++
Sbjct: 478 AMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRW 535



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 181/375 (48%), Gaps = 29/375 (7%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           ++ RM P  P V S+  +   L K+   D+   +   +++ G  PD+ T+S LI+ FCK 
Sbjct: 204 FLARM-PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G V     +L  +L+    PN V + SL+  L     I +A  +  +       PDV +Y
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII----------DGLCK 265
           N  I+GLC+      A  +F+ M     E G  C PN  +Y+ +I          DGLCK
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMV----ERG--CTPNASSYSMLIVDILLYTVLLDGLCK 376

Query: 266 EGFVDKAKELFLKMKDENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            G  D+A  LF K+ DE I  PDV  Y  ++   C     ++A ++  +M+++    +VV
Sbjct: 377 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVV 435

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+++++  LC + ++  A  +L  M+  G  P+  TY TL+D  C   K   A +LF   
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              GC+ DVV+Y+ LI         EEA  L+++++ +   P   T     LGL      
Sbjct: 496 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT-----LGLL----- 545

Query: 445 ERALKLFDEMRRNHV 459
            R LKL ++ R+  V
Sbjct: 546 HRKLKLLNKPRKAEV 560


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 223/425 (52%), Gaps = 23/425 (5%)

Query: 45  YPTTTSKLKESLRLTVK-DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPS 103
           Y      L E L++ +  D A+    L E C++    D        A  IFD M    PS
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD--------AERIFDEM----PS 491

Query: 104 P---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
               P + SF+ L G L+KN   D  L  F+ + +AGL PD   ++ILI  FC+ G +S 
Sbjct: 492 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 551

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              V   +L      + VT+ +++ GLC E  + EA  LFT+       PD +T+ TLIN
Sbjct: 552 ALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 611

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G  + G+   A+ LFE M   N       KP+ VTYNT+IDG CK   ++K  EL+  M 
Sbjct: 612 GYXKDGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 665

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              I P+ ++Y  +I G+C     +EA RL+ EM+++G +  ++T + I+   C+ G   
Sbjct: 666 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 725

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA   L  M+ +G+ P+  TYNTLI+G+   + +D A  L   ME++G + DV++YN ++
Sbjct: 726 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 785

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHV 459
           N + +   ++EA  +  +M+ +G+ P   TY +L  G    + ++ A ++ DEM +R  V
Sbjct: 786 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 845

Query: 460 AADTY 464
             D +
Sbjct: 846 PDDKF 850



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 205/415 (49%), Gaps = 22/415 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ++R +     V +  +  GC A           F+ L S GL   I   + L+   
Sbjct: 290 VFDLLVRTY-----VQARKLREGCEA-----------FRVLKSKGLCVSINACNSLLGGL 333

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K+G V   + +   ++RS    N  T   +I  LC   +I    +  +        PDV
Sbjct: 334 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 393

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNTLIN  CR G    A  L + M+      G   KP   TYN II+GLCK G   +A
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPCVFTYNAIINGLCKTGKYLRA 447

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K +  +M    ++PD  TY  ++   C  ++  +A+R+F EM  QGV PD+V+FS ++  
Sbjct: 448 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 507

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L KNG +D+A +    M   G+ P+   Y  LI G+C    +  A K+   M   GC  D
Sbjct: 508 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLD 567

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+YNT++N  CK K + EA  L++EM  +G+ P   T+ TL  G  +   + +A+ LF+
Sbjct: 568 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFE 627

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            M + ++  D  TYN  IDG CK   + +  EL+  +   +   N +SY  LI+G
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 213/432 (49%), Gaps = 29/432 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     +    +    L   ++  GL P ++T++ +IN  CK G+      V
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L+   +P+  T+  L+   C    +M+A  +F +       PD+ +++ LI  L +
Sbjct: 451 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510

Query: 225 TGHTIVALNLFEEMANGN------------GEF---GVV--------------CKPNTVT 255
            G    AL  F +M N              G F   GV+              C  + VT
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT 570

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNTI++GLCKE  + +A ELF +M +  + PD  T+T++I G+    + N+A  LF  M+
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + ++PDVVT++ ++D  CK  +M+K + L   MI R + PN  +Y  LI+GYC    + 
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 690

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +L+  M   G    +++ NT++  YC+  +  +A    S ML KGI P  +TYNTL 
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +   ++RA  L ++M  + +  D  TYN  ++G  + G + EA  +   + +    
Sbjct: 751 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 810

Query: 496 LNIVSYNCLIDG 507
            +  +Y  LI+G
Sbjct: 811 PDRSTYTSLING 822



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 200/393 (50%), Gaps = 7/393 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D ML++  SP   +++NIL     +N +      +F  + S G+ PD+ + S LI   
Sbjct: 450 VLDEMLKIGMSPD-TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G +         +  +   P+ V +T LI G C    + EA  +  +     C  DV
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNT++NGLC+      A  LF EM     E GV   P+  T+ T+I+G  K+G ++KA
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYXKDGNMNKA 622

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF  M   N+ PDVVTY ++I GFC  ++  +   L+ +M+ + + P+ +++ ++++ 
Sbjct: 623 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C  G + +A RL + M+ +G      T NT++ GYC       A +   +M   G + D
Sbjct: 683 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 742

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            ++YNTLIN + K ++++ A +L ++M + G+ P V+TYN +  G     +++ A  +  
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 802

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           +M    V  D  TY + I+G      + EA  +
Sbjct: 803 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 835



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 142/252 (56%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N+++ GL K G+VD A E++ ++    +  +V T   +I   C        K    +M +
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +GV PDVVT++ +++  C+ G +++A  L++ M  +G+ P  +TYN +I+G C T K   
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+ +   M   G   D  +YN L+   C+N ++ +A  ++ EM S+G+ P +V+++ L  
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L +   +++ALK F +M+   +A D   Y   I G C++G + EAL++   + +    L
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 497 NIVSYNCLIDGL 508
           ++V+YN +++GL
Sbjct: 567 DVVTYNTILNGL 578



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 2/156 (1%)

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G NP    ++ L+  Y    K+    + F  ++S G    + + N+L+    K   V+ A
Sbjct: 285 GSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +Y E++  G++  V T N +   L +  ++E       +M    V  D  TYN  I+ 
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C+ G + EA EL  ++     +  + +YN +I+GL
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGL 438


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 226/417 (54%), Gaps = 7/417 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D +++   + P ++++N++   L K   +  V  +++R+ +  L PD+ T+ ILI+  
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G V     V   I+++    +A  + SL+KG C   R+ EA   F     FA   ++
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNL 368

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN +I GL  +G    A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +KA
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKA 423

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +F + +      DV +Y+S+I G C      +A +++ +M   G +P+   ++ ++  
Sbjct: 424 FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+  +   A R+   M   G +P   TYNTLIDG C  +K   A  +   M  NG   D
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y +LI     +K +++ALS++ ++L KG+K  V+ +N L  GL    +V+ AL +F 
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603

Query: 453 EMR-RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +M+ + +   +  TYN  +DGL ++G++ +A  L+ +I +   E +I+SYN  I GL
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 219/424 (51%), Gaps = 11/424 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           + AL + D M R    P  V  +N L G   K   ++ V+ ++ +L    G  P++ T++
Sbjct: 210 DHALDLLDEMPRSGVQPD-VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++++  CK GR      V  R++ +   P+ +T+  LI GLC    +  AA ++++    
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               D   YN+L+ G C+ G    A   ++         G     N  TYN +I GL   
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDS 381

Query: 267 GFVDKAKELF-LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G VD+A EL+ L  KD    PD VT+ ++I G C     N+A  +F E    G Q DV +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S +++ LC  G++  A ++ E M   G  PN++ YN LI G+C   +   A +++  M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            NGC   V++YNTLI+  CK +  +EA S+  EM+  G  P + TY +L  GLF   +++
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY-ELNIVSYNCL 504
            AL ++ ++    +  D   +N  I GLC +G V EAL +F  +++ K    N+V+YN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 505 IDGL 508
           +DGL
Sbjct: 622 MDGL 625



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 218/429 (50%), Gaps = 11/429 (2%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG----LFP 140
           I P+ AL  F  +  +    P + S N L     + + +    + F  L+       + P
Sbjct: 97  IMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAP 156

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           ++ T++I++   C  G +     +   + R    P+ +T+++L+ GL  + R+  A  L 
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLL 216

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +      +PDV  YN L+ G  + G     + +++++    G      +PN  TYN ++
Sbjct: 217 DEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG-----ARPNLATYNVML 271

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DGLCK G   +  E++ +M   N+ PDV+TY  +I G C + D + A R++ E++  G+ 
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            D   ++ ++   C+ G++ +A +  +   + G+  N  TYN +I G   +  +D A +L
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL 390

Query: 381 FVSMESN-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +  +E +  C+ D V++ TLI+  C+N    +A +++ E    G +  V +Y+++  GL 
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
            + ++  A+K++++M ++    +++ YN  I G C+     +A+ ++  + D+     ++
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 500 SYNCLIDGL 508
           +YN LIDGL
Sbjct: 511 TYNTLIDGL 519



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 199/410 (48%), Gaps = 44/410 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV------ 158
           P V ++ IL   L ++   D    ++  +   GL  D   ++ L+  FC+ GRV      
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 159 --SHGFVVLGRILRS----------------------------CFTPNAVTFTSLIKGLC 188
             S GF  L R LR+                               P+ VTF +LI GLC
Sbjct: 357 WDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                 +A  +F + RV   + DVF+Y+++INGLC  G  + A+ ++E+M          
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG------ 469

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKPN+  YN +I G C+      A  ++ KM D   +P V+TY ++I G C A  + EA 
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  EM++ G  PD+ T+  ++  L  + K+D A  + + ++++G+  +   +N LI G 
Sbjct: 530 SVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGL 589

Query: 369 CLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           C   K+D A  +F  M E   C  ++V+YNTL++   +   +++A +L++ +   G++P 
Sbjct: 590 CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPD 649

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +++YNT   GL    ++   ++L DE+    +     T+N  +  + K G
Sbjct: 650 IISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 165/324 (50%), Gaps = 7/324 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ ++D + +     P   +F  L   L +N   +   ++F+    +G   D++++S 
Sbjct: 385 DEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  C +GR+     V  ++ +    PN+  + +LI G C   R  +A  +++K     
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TYNTLI+GLC+      A ++  EM   NG       P+  TY ++I GL  + 
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVE-NG-----FTPDITTYGSLIRGLFSDK 558

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTF 326
            +D A  ++ ++  + +  DV+ +  +I G C A   +EA  +F +M ++    P++VT+
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTY 618

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + +MD L + G +DKA+ L   +   G+ P+  +YNT I G C  D+I    +L   + S
Sbjct: 619 NTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLS 678

Query: 387 NGCMHDVVSYNTLINWYCKNKDVE 410
            G +  V+++N L+    K   ++
Sbjct: 679 RGIIPTVITWNILVRAVIKYGPIQ 702


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 224/417 (53%), Gaps = 29/417 (6%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +++    P + +++ +   L K+        + + +   G+FPD   ++ LI+ FCK+G 
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
               + +   +      P+++ F++LI GL    +++EA  LF +      EPD  TY  
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 218 LINGLCRTGHTIVALNLFEEM---------------ANG---NGEFGV-------VCKP- 251
           LI+G C+ G    A  L  +M               A+G   +GE          +C+  
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 252 ---NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              N  TYNTI++GLCK G + +A +L  +MK+  ++PD +TYT+++  +    +  +A+
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM+D+G+QP VVTF+V+M+ LC +GK++   RLL+ M+ +G+ PN  TYN+++  Y
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C+ + +  + +++  M + G + D  +YN LI  +CK ++++EA  L+ EM+ K    T 
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTA 530

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            +YN L  G F+  ++  A +LF+EMRR  + A    YN F+D   + G +   LEL
Sbjct: 531 SSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 206/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+  +            V+ L K +   GL P++YT+S +I   CK G+V  G  V
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    P+ V +T+LI G C       A  LF++       PD   ++ LI GL  
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G  + A  LF EM     E      P+ VTY  +IDG CK G + KA  L  +M    +
Sbjct: 263 SGKVVEADKLFNEMIKKGFE------PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTYT++  G C + + + A  L  EM  +G+Q ++ T++ I++ LCK G + +A +
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+E M   G++P+T TY TL+D Y  T ++  AR+L   M   G    VV++N L+N  C
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +  +E+   L   ML KGI P   TYN++       + +  + +++  M    V  D+ 
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I G CK+  + EA  L + + + ++ L   SYN LI G
Sbjct: 497 TYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG 539



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 216/419 (51%), Gaps = 8/419 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLA-KNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA   FD +L  +       S N+   CL+ K      VL +F      G+  +  +++
Sbjct: 56  NEARKFFDKLLN-YGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYN 114

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           IL+N   ++G++     +L R+      P+ V++T++I G C    + +   L  + ++ 
Sbjct: 115 ILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK 174

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +P+++TY+++I  LC++G  +    +  EM    G F     P+ V Y T+IDG CK 
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK-RGVF-----PDHVIYTTLIDGFCKL 228

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G    A +LF +M+   I PD + ++++I G   +    EA +LF EM+ +G +PD VT+
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  CK G+M KA  L   M+  G+ PN  TY  L DG C + ++D A +L   M  
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   ++ +YNT++N  CK  ++ +A+ L  EM   G+ P  +TY TL    ++  ++ +
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK 408

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           A +L  EM    +     T+N  ++GLC SG + +   L + + +     N  +YN ++
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 162/347 (46%), Gaps = 29/347 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F+ L   L+ +        LF  +   G  PD  T++ LI+ +CK+G +   F +
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++   TPN VT+T+L  GLC    +  A  L  +      + ++ TYNT++NGLC+
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367

Query: 225 TGHTIVALNLFEEMANGN------------------GEFGVV-----------CKPNTVT 255
            G+ + A+ L EEM                      GE                +P  VT
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +N +++GLC  G ++  + L   M ++ I P+  TY S+++ +C  N+   +  ++  M 
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            QGV PD  T+++++   CK   M +A  L + M+ +  N    +YN LI G+    K+ 
Sbjct: 488 AQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            AR+LF  M   G +     YN  ++   +  ++E  L L  E + K
Sbjct: 548 EARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 108/199 (54%)

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           ++F E    GV  +  +++++M+ L + GK+ +A  LL  M ++G  P+  +Y T+IDGY
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   ++    +L   M+  G   ++ +Y+++I   CK+  V E   +  EM+ +G+ P  
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           V Y TL  G  ++   + A KLF EM    +  D+  ++  I GL  SG V+EA +LF  
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 489 IRDSKYELNIVSYNCLIDG 507
           +    +E + V+Y  LIDG
Sbjct: 276 MIKKGFEPDEVTYTALIDG 294



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 7/244 (2%)

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
           F    + L    KD   +P V  +    +    A   NEA++ F ++++ GV     + +
Sbjct: 21  FTHFVERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCN 78

Query: 328 VIMDELCKNGKMDKASRLLELMI---WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           + +   C + K D    +L++       GV  NT +YN L++      KI  A  L + M
Sbjct: 79  LYLT--CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRM 136

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E  GC+ DVVSY T+I+ YC   ++++ + L  EM  KG+KP + TY+++ L L +  +V
Sbjct: 137 EFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKV 196

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
               K+  EM +  V  D   Y   IDG CK G    A +LF  +   +   + ++++ L
Sbjct: 197 VEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSAL 256

Query: 505 IDGL 508
           I GL
Sbjct: 257 ICGL 260


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 223/425 (52%), Gaps = 23/425 (5%)

Query: 45  YPTTTSKLKESLRLTVK-DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPS 103
           Y      L E L++ +  D A+    L E C++    D        A  IFD M    PS
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD--------AERIFDEM----PS 230

Query: 104 P---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
               P + SF+ L G L+KN   D  L  F+ + +AGL PD   ++ILI  FC+ G +S 
Sbjct: 231 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 290

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              V   +L      + VT+ +++ GLC E  + EA  LFT+       PD +T+ TLIN
Sbjct: 291 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 350

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G  + G+   A+ LFE M   N       KP+ VTYNT+IDG CK   ++K  EL+  M 
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 404

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              I P+ ++Y  +I G+C     +EA RL+ EM+++G +  ++T + I+   C+ G   
Sbjct: 405 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAV 464

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA   L  M+ +G+ P+  TYNTLI+G+   + +D A  L   ME++G + DV++YN ++
Sbjct: 465 KADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVIL 524

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHV 459
           N + +   ++EA  +  +M+ +G+ P   TY +L  G    + ++ A ++ DEM +R  V
Sbjct: 525 NGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 584

Query: 460 AADTY 464
             D +
Sbjct: 585 PDDKF 589



 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 211/401 (52%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NI+   L KN+  +   S    +   G+FPD+ T++ LIN +C+ G +   F ++ 
Sbjct: 97  VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P   T+ ++I GLC   + + A  +  +       PD  TYN L+   CR  
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 216

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           + + A  +F+EM +     GVV  P+ V+++ +I  L K G +D+A + F  MK+  + P
Sbjct: 217 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 270

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YT +I GFC     +EA ++  EM++QG   DVVT++ I++ LCK   + +A  L 
Sbjct: 271 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 330

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RGV P+ YT+ TLI+GY     ++ A  LF  M       DVV+YNTLI+ +CK 
Sbjct: 331 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 390

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++E+   L+++M+S+ I P  ++Y  L  G   +  V  A +L+DEM      A   T 
Sbjct: 391 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  + G C++G  ++A E    +       + ++YN LI+G
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 491



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 202/403 (50%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     +    +    L   ++  GL P ++T++ +IN  CK G+      V
Sbjct: 130 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L+   +P+  T+  L+   C    +M+A  +F +       PD+ +++ LI  L +
Sbjct: 190 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 249

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL  F +M N          P+ V Y  +I G C+ G + +A ++  +M ++  
Sbjct: 250 NGCLDQALKYFRDMKNAG------LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DVVTY +++ G C     +EA  LF EM ++GV PD  TF+ +++   K+G M+KA  
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E+MI R + P+  TYNTLIDG+C   +++   +L+  M S     + +SY  LIN YC
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               V EA  L+ EM+ KG + T++T NT+  G        +A +    M    +  D  
Sbjct: 424 NMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 483

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+G  K   +  A  L   + +S    ++++YN +++G
Sbjct: 484 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 206/415 (49%), Gaps = 22/415 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ++R +     V +  +  GC A           F+ L S GL   I   + L+   
Sbjct: 29  VFDLLVRTY-----VQARKLREGCEA-----------FRVLKSKGLCVSINACNSLLGGL 72

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K+G V   + +   ++RS    N  T   +I  LC   +I    +  +        PDV
Sbjct: 73  VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 132

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNTLIN  CR G    A  L + M+      G   KP   TYN II+GLCK G   +A
Sbjct: 133 VTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K +  +M    ++PD  TY  ++   C  ++  +A+R+F EM  QGV PD+V+FS ++  
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 246

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L KNG +D+A +    M   G+ P+   Y  LI G+C    +  A K+   M   GC+ D
Sbjct: 247 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+YNT++N  CK K + EA  L++EM  +G+ P   T+ TL  G  +   + +A+ LF+
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            M + ++  D  TYN  IDG CK   + +  EL+  +   +   N +SY  LI+G
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 421



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 215/401 (53%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +++ N L G L K    D    +++ +  +G+  ++YT +I+IN  CK  ++ +    L 
Sbjct: 62  INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLS 121

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ VT+ +LI   C +  + EA  L         +P VFTYN +INGLC+TG
Sbjct: 122 DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG 181

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             + A  + +EM        +   P+T TYN ++   C+   +  A+ +F +M  + + P
Sbjct: 182 KYLRAKGVLDEM------LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 235

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+V+++++I         ++A + F +M + G+ PD V +++++   C+NG M +A ++ 
Sbjct: 236 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 295

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+ +G   +  TYNT+++G C    +  A +LF  M   G   D  ++ TLIN Y K+
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 355

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++ +A++L+  M+ + +KP VVTYNTL  G  +  ++E+  +L+++M    +  +  +Y
Sbjct: 356 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 415

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              I+G C  G V EA  L+  + +  +E  I++ N ++ G
Sbjct: 416 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 196/380 (51%), Gaps = 7/380 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D ML++  SP   +++NIL     +N +      +F  + S G+ PD+ + S LI   
Sbjct: 189 VLDEMLKIGMSPD-TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G +         +  +   P+ V +T LI G C    + EA  +  +     C  DV
Sbjct: 248 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNT++NGLC+      A  LF EM     E GV   P+  T+ T+I+G  K+G ++KA
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYSKDGNMNKA 361

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF  M   N+ PDVVTY ++I GFC  ++  +   L+ +M+ + + P+ +++ ++++ 
Sbjct: 362 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 421

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C  G + +A RL + M+ +G      T NT++ GYC       A +   +M   G + D
Sbjct: 422 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 481

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            ++YNTLIN + K ++++ A +L ++M + G+ P V+TYN +  G     +++ A  +  
Sbjct: 482 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 541

Query: 453 EMRRNHVAADTYTYNNFIDG 472
           +M    V  D  TY + I+G
Sbjct: 542 KMIERGVNPDRSTYTSLING 561



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 142/252 (56%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N+++ GL K G+VD A E++ ++    +  +V T   +I   C        K    +M +
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +GV PDVVT++ +++  C+ G +++A  L++ M  +G+ P  +TYN +I+G C T K   
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+ +   M   G   D  +YN L+   C+N ++ +A  ++ EM S+G+ P +V+++ L  
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L +   +++ALK F +M+   +A D   Y   I G C++G + EAL++   + +    L
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305

Query: 497 NIVSYNCLIDGL 508
           ++V+YN +++GL
Sbjct: 306 DVVTYNTILNGL 317



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 127/259 (49%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C  N + ++ ++    +   + +  E F  +K + +   +    S++ G       + A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            ++ E++  GVQ +V T +++++ LCKN K++     L  M  +GV P+  TYNTLI+ Y
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    ++ A +L  SM   G    V +YN +IN  CK      A  +  EML  G+ P  
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TYN L +       +  A ++FDEM    V  D  +++  I  L K+G + +AL+ FR 
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 489 IRDSKYELNIVSYNCLIDG 507
           ++++    + V Y  LI G
Sbjct: 263 MKNAGLAPDNVIYTILIGG 281



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 2/237 (0%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+  + L L   +   NP  + +  ++R +  A    E    F  +  +G+   +   + 
Sbjct: 10  VEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS 67

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  L K G +D A  + + ++  GV  N YT N +I+  C   KI++ +     ME  G
Sbjct: 68  LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 127

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+YNTLIN YC+   +EEA  L   M  KG+KP V TYN +  GL +  +  RA 
Sbjct: 128 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 187

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + DEM +  ++ DT TYN  +   C++  +++A  +F  +       ++VS++ LI
Sbjct: 188 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 2/156 (1%)

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G NP    ++ L+  Y    K+    + F  ++S G    + + N+L+    K   V+ A
Sbjct: 24  GSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +Y E++  G++  V T N +   L +  ++E       +M    V  D  TYN  I+ 
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C+ G + EA EL  ++     +  + +YN +I+GL
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGL 177


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 209/412 (50%), Gaps = 10/412 (2%)

Query: 98  LRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           L  HP+  P   S+ +L   L  ++  D  + L + + SAG+  D+ T+  LI   C   
Sbjct: 105 LEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAA 164

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            V     ++G +  S   PN V ++SL++G C   R  +   +F +      EPDV  Y 
Sbjct: 165 EVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 224

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LI+ LC+ G    A  + + M     E      PN VTYN +I+ +CKEG V +A  + 
Sbjct: 225 GLIDSLCKVGKAKKAHGVMDMMVRRGLE------PNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELC 334
            KM ++ + PDVVTY ++I+G     + +EA  L  EM+     V+P+VVTF+ ++  LC
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC 338

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
             G+M +A ++  +M   G   N  TYN LI G     K+  A +L   M S G   D  
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y+ LI  +CK   V+ A  L S M  +GI+P +  Y  L + + E   +ERA  LF+EM
Sbjct: 399 TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             N+   D   Y+  I G CK+G +  A EL ++I D     + V+Y+ +I+
Sbjct: 459 -DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 166/300 (55%), Gaps = 5/300 (1%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  +YNT++  LCR GH   A  L   M+    E    C+PN V+Y  ++  LC +   D
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A  L   M+   +  DVVTY ++IRG C A + ++A  L  EM + G++P+VV +S ++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
              CK+G+ +   ++   M  +G+ P+   Y  LID  C   K   A  +   M   G  
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +VV+YN LIN  CK   V+EA+ +  +M  KG+ P VVTYNTL  GL ++ +++ A+ L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 451 FDEMRR--NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +EM R  N V  +  T+N+ I GLC  G + +A ++   + ++   +N+V+YN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L     K+  ++ V  +F  ++  G+ PD+  ++ LI+  CK+G+      V
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++R    PN VT+  LI  +C E  + EA  +  K       PDV TYNTLI GL  
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L EEM  G      + KPN VT+N++I GLC  G + +A ++   M++   
Sbjct: 303 VLEMDEAMWLLEEMVRGKN----IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGC 358

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VTY  +I G    +   +A  L  EM   G++PD  T+S+++   CK  ++D+A  
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAED 418

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M  RG+ P  + Y  L+   C    ++ AR LF  M++N  + DVV+Y+T+I+  C
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGAC 477

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D++ A  L   ++ +G+ P  VTY+ +     +   +E A  +  +M  +    D  
Sbjct: 478 KAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVA 537

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
            +++ I G    G + + LEL R +
Sbjct: 538 VFDSLIQGYSTKGEINKVLELIREM 562



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 179/337 (53%), Gaps = 11/337 (3%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVF---ACEPDVFTYNTLINGLCRTGHTIVAL 232
           +AV++ +++  LC       A AL     +    AC P+  +Y  L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L   M +         + + VTY T+I GLC    VDKA EL  +M +  I P+VV Y+
Sbjct: 136 GLLRSMRSAG------VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+++G+C +  W +  ++F+EM ++G++PDVV ++ ++D LCK GK  KA  ++++M+ R
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN  TYN LI+  C    +  A  +   M   G   DVV+YNTLI       +++EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 413 LSLYSEMLSKG--IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           + L  EM+     +KP VVT+N++  GL +I ++ +A ++   M       +  TYN  I
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            GL +   V +A+EL   +     E +  +Y+ LI G
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 10/334 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+R     P V ++N+L  C+ K       + + K+++  G+ PD+ T++ LI   
Sbjct: 242 VMDMMVR-RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300

Query: 153 CKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             +  +     +L  ++R      PN VTF S+I+GLC   R+ +A  +        C  
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           ++ TYN LI GL R      A+ L +EM +     G+  +P++ TY+ +I G CK   VD
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTS----LGL--EPDSFTYSILIKGFCKMWQVD 414

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A++L   M+D  I P++  Y  ++   C       A+ LF EM D     DVV +S ++
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMI 473

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
              CK G +  A  LL+ ++  G+ P+  TY+ +I+ +  +  ++ A  +   M ++G +
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
            DV  +++LI  Y    ++ + L L  EM++K I
Sbjct: 534 PDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK---GIKPTVVTYNTLFLGLFEIHQVER 446
           + D VSYNT++   C+    + A +L   M  +     +P  V+Y  L   L      ++
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A+ L   MR   V AD  TY   I GLC +  V +A+EL   + +S  E N+V Y+ L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 507 G 507
           G
Sbjct: 194 G 194


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 217/435 (49%), Gaps = 37/435 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI----------------- 147
           P V ++NIL   L KN   D    L   +++ G  PD+ +++                  
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241

Query: 148 -------------LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
                        LIN FC+  +V   F++LG+++     PN +T++++I  L     + 
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
            A A++ K  V  C P+V+T+ +L+ G    G  + ALN++  MA    E      PN V
Sbjct: 302 LALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFE------PNVV 355

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YNT+I GLC  G + +A  +  KM+    +P+V TY ++I GF  A D   A  ++ +M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           M  G  P+VV ++ +++ LC++    +A  L+E M      PNT T+NT I G C + ++
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  LF  ME  GC  ++ +YN +++   K   ++EAL L +EM  KG++  +VTYNT+
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR-DSK 493
           F G   + + E ALKL  +M    V  D  TYN      C  G V  A++L   +    K
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK 595

Query: 494 YELNIVSYNCLIDGL 508
           +   + +Y  L+ G+
Sbjct: 596 WVPEVAAYTSLLWGI 610



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 215/419 (51%), Gaps = 12/419 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +F Y +R     P V  +N L   +     +  +  ++  +   G  P++YT++IL
Sbjct: 132 QALKMF-YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNIL 190

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +   CK  RV     +L  +      P+ V++T++I  +    ++ EA  L  +      
Sbjct: 191 LKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF----- 245

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P+V  YN LING CR         L  +M     E G+   PN +TY+T+I  L   G 
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMV----EKGI--DPNVITYSTVISSLSGIGN 299

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A  ++ KM     +P+V T+TS+++G+       EA  ++  M ++G +P+VV ++ 
Sbjct: 300 VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC +GKM +A  +   M   G +PN  TY  LIDG+     +  A +++  M +NG
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C+ +VV Y +++N  C++    +A SL  +M +    P  VT+NT   GL    +VE A+
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            LF +M +   + +  TYN  +DGL K   + EALEL   + +   ELN+V+YN +  G
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 187/374 (50%), Gaps = 9/374 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L+   + +  L+++ ++   G  P++YT + L+  +   GRV     +
Sbjct: 282 PNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNI 341

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+    F PN V + +LI GLC+  ++ EA ++ +K     C P+V TY  LI+G  +
Sbjct: 342 WNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  ++ +M   NG     C PN V Y ++++ LC+     +A  L  KM  +N 
Sbjct: 402 AGDLVGASEIWNKMMT-NG-----CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VT+ + I+G C +     A  LF +M   G  P++ T++ ++D L K  ++ +A  
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALE 515

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  M  +G+  N  TYNT+  G+C   K + A KL   M   G   D ++YNTL   YC
Sbjct: 516 LVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYC 575

Query: 405 KNKDVEEALSLYSEMLSKGIK--PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
               V+ A+ L  + LS G K  P V  Y +L  G+     VE A+   D+M    +  +
Sbjct: 576 MQGKVKTAIQLLDK-LSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLN 634

Query: 463 TYTYNNFIDGLCKS 476
             T+N  + GL  S
Sbjct: 635 AATWNALVRGLFNS 648



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 190/364 (52%), Gaps = 13/364 (3%)

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           SG G++ L     AL ++  M     SP   +  +++ G   + +  +  L+++ R+   
Sbjct: 295 SGIGNVEL-----ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA-LNIWNRMAEE 348

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  P++  ++ LI+  C  G++     V  ++ R+  +PN  T+ +LI G      ++ A
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
           + ++ K     C P+V  Y +++N LCR+     A +L E+M+  N      C PNTVT+
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN------CPPNTVTF 462

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT I GLC  G V+ A  LF +M+    +P++ TY  V+ G    N   EA  L  EM +
Sbjct: 463 NTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G++ ++VT++ I    C  GK ++A +LL  M+  GV P+  TYNTL   YC+  K+  
Sbjct: 523 KGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKT 582

Query: 377 ARKLFVSMESNG-CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           A +L   + + G  + +V +Y +L+   C    VEEA+    +ML++GI     T+N L 
Sbjct: 583 AIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALV 642

Query: 436 LGLF 439
            GLF
Sbjct: 643 RGLF 646



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 35/310 (11%)

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           ++A N F  +AN         +   +TY  +I+ L +E  VD  + L  +MK E I+   
Sbjct: 60  VLASNYFRSIANSKA-----FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSE 114

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             + +VI  +       +A ++F  + + G QP V  ++ ++D +    +      +   
Sbjct: 115 DLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSN 174

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS------------- 395
           M   G  PN YTYN L+   C  +++D A KL V M + GC  DVVS             
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234

Query: 396 -----------------YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
                            YN LIN +C+   V+E   L  +M+ KGI P V+TY+T+   L
Sbjct: 235 VEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
             I  VE AL ++ +M     + + YT+ + + G    G VLEAL ++  + +  +E N+
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354

Query: 499 VSYNCLIDGL 508
           V+YN LI GL
Sbjct: 355 VAYNTLIHGL 364


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 220/430 (51%), Gaps = 14/430 (3%)

Query: 87  PNEALCIFDYMLRMHP----SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           P   L +F+ + R       +P  V ++ IL  C  + +  D   +   RL  AGL    
Sbjct: 100 PALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGT 159

Query: 143 YTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
              +  + C C   R      V+L R+      P+A+++ ++IK LC +SR  EA  +  
Sbjct: 160 IQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQ 219

Query: 202 K--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           +       C PDV ++NT+I+G  + G    A NLF EM     + GVV  P+  TYN+I
Sbjct: 220 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMV----QKGVV--PDVGTYNSI 273

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +D LCK   +DKA+ +  +M D+ + PD VTY ++I G+  +  W E+ ++F +M  +G+
Sbjct: 274 VDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGL 333

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD VTFS  M  LCK+G+   A  + + M  +G  P+  +Y+ L+ GY    +      
Sbjct: 334 IPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNN 393

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           LF SM   G + +    N LI+ + K   ++EA+ +++EM  +G++P VVTY+TL     
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFC 453

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK-YELNI 498
            + ++  A++ F +M    +  +T  Y++ I G C  G +++A E    +     +  NI
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNI 513

Query: 499 VSYNCLIDGL 508
           V ++ +I  L
Sbjct: 514 VFFSSIIHSL 523



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 204/405 (50%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N +    + + H+     +F+++ S GL PD  T S  ++  CK GR      +
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+ V+++ L+ G   E R  +   LF          +    N LI+   +
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ +F EM  G G      +PN VTY+T+I   C+ G +  A E F +M    I
Sbjct: 420 RGMMDEAMLVFTEM-QGQG-----VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMDKAS 343
            P+   Y S+I GFC   D  +AK    EMM +G+ +P++V FS I+  LC  G++  A 
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +  L+I  G  P   T+N+LIDGYCL  K++ A  +  +M S G   DVV+ NTL++ Y
Sbjct: 534 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGY 593

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK+  +++ L L+ EML K +KPT VTYN +  GL    +   A K+F EM  +  A D 
Sbjct: 594 CKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDI 653

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   + GLC++    EA+ LF  +     + +I   N +I+ L
Sbjct: 654 DTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 205/433 (47%), Gaps = 14/433 (3%)

Query: 60  VKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK 119
           + D  +   F+   CK     D        A  IF YM       P + S++IL    A 
Sbjct: 334 IPDTVTFSSFMSSLCKHGRSKD--------AEEIFQYMT-TKGHMPDIVSYSILLHGYAT 384

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
              +  + +LF  +   G+  + +  +ILI+   K G +    +V   +      PN VT
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           +++LI   C   R+ +A   F++      EP+   Y++LI+G C  G  + A     EM 
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
           +       + +PN V +++II  LC EG V  A+++F  +      P +VT+ S+I G+C
Sbjct: 505 SKG-----LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYC 559

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 +A  +   M+  G++PDVVT + ++   CK+GK+D    L   M+ + V P T 
Sbjct: 560 LVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 619

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TYN ++DG     +   A+K+F  M  +G   D+ +Y  L+   C+N   +EA++L+ ++
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
            +   K  +   NT+   L+++ + E A  LF  +  + +  +  TY   I  L K G V
Sbjct: 680 GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739

Query: 480 LEALELFRAIRDS 492
            EA  +F ++  S
Sbjct: 740 EEADTMFSSMEKS 752



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 189/379 (49%), Gaps = 17/379 (4%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            NIL    AK    D  + +F  +   G+ P++ T+S LI+ FC+MGR++       +++
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK------HRVFACEPDVFTYNTLINGLC 223
                PN   + SLI G C    +++A    ++      HR     P++  ++++I+ LC
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHR-----PNIVFFSSIIHSLC 524

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G  + A ++F      N    +  +P  VT+N++IDG C  G ++KA  +   M    
Sbjct: 525 IEGRVMDAQDVF------NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 578

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PDVVT  +++ G+C +   ++   LF EM+ + V+P  VT+++++D L + G+   A 
Sbjct: 579 IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++   MI  G   +  TY  L+ G C  D  D A  LF  + +  C  D+   NT+IN  
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K +  EEA  L++ + + G+ P V TY  +   L +   VE A  +F  M ++  A  +
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758

Query: 464 YTYNNFIDGLCKSGFVLEA 482
              N+ I  L + G +++A
Sbjct: 759 RLLNDIIRMLLQKGDIVKA 777



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 29/271 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L          +    +   + S G+ PD+ T++ L++ +CK G++  G ++
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P  VT+  ++ GL    R   A  +F +        D+ TY  L+ GLCR
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTVT 255
              T  A+ LF ++   + +F +                                PN  T
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  +I  L KEG V++A  +F  M+     P       +IR      D  +A     ++ 
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 785

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
              +  +  T S++M      GK  +  + L
Sbjct: 786 GTIISLEASTTSLLMSLFSSKGKHREQIKFL 816


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 204/400 (51%), Gaps = 33/400 (8%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +FNI+   L K             + + G+ P++ T++ +I+ +C  GRV    +VL 
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P++ T+ SLI G+C   ++ EA+ +  K +     P   TYNTLI+G C  G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 227 HTIVALNLFEEM---------------------------ANGN----GEFGVVCKPNTVT 255
             + A    +EM                           A+G     G+ G+V  P+++T
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV--PDSIT 413

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I+G C+ G   KA  L  +M  + I P +VTYTS+I      N    A  LF +++
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G  PD++ F+ ++D  C NG +D+A  LL+ M  R + P+  TYNTL+ G C   K++
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            AR+L   M+  G   D +SYNTLI+ Y K  D+ +A ++  EMLS G  PT++TYN L 
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            GL +  Q + A +L  EM    +  D  TY + I+G+ K
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L     + K  D     F  +   G+ P I T + +++ F K+ +    +V+   + 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R        TF  +I  LC E ++ +A            +P+V TYNT+I+G C  G   
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  + + M N   E      P++ TY ++I G+CK G +++A  +  KMK+  + P  V
Sbjct: 289 GARMVLDIMKNRGVE------PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I G+C   D  +A     EM+ + + P V T+++++  L   GKMD+A  +++ M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G+ P++ TYN LI+GYC       A  L   M S G    +V+Y +LI    K   +
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           + A  L+ +++ +G  P ++ +N L  G      ++RA  L  EM + ++  D  TYN  
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C+ G V EA EL + ++      + +SYN LI G
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 168/343 (48%), Gaps = 6/343 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   + K    +    + +++   GL P   T++ LI+ +C  G +   F  
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGY 363

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R    P   T+  LI  L  E ++ EA  +          PD  TYN LING CR
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A NL +EM +         +P  VTY ++I  L K   +  A +LF K+  E  
Sbjct: 424 CGNAKKAFNLHDEMISKG------IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD++ + ++I G C   + + A  L  EM  + + PD VT++ +M   C+ GK+++A  
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  RG+ P+  +YNTLI GY     I+ A  +   M S G    +++YN LI   C
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           KN+  + A  L  EM+SKGI P   TY +L  G+ ++     A
Sbjct: 598 KNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 139/275 (50%), Gaps = 3/275 (1%)

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           ++F E+A      G     +++ ++ +I   C+    D A E F  MK++ + P + T+ 
Sbjct: 149 DVFHELAITRDRLGT---KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           +++  F   N       L+ EM    ++  V TF+++++ LCK GK+ KA   +  M   
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV PN  TYNT+I GYC   +++ AR +   M++ G   D  +Y +LI+  CK   +EEA
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +  +M   G+ PT VTYNTL  G      + +A    DEM R  +     TYN  I  
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L   G + EA  + + + DS    + ++YN LI+G
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 70/152 (46%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           ++  ++ LI   C   + D A + F  M+  G +  + ++N +++ + K    E    LY
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           +EM    IK TV T+N +   L +  ++++A      M    V  +  TYN  I G C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G V  A  +   +++   E +  +Y  LI G+
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGM 316


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/412 (33%), Positives = 209/412 (50%), Gaps = 10/412 (2%)

Query: 98  LRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           L  HP+  P   S+ +L   L  ++  D  + L + + SAG+  D+ T+  LI   C   
Sbjct: 105 LEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAA 164

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            V     ++G +  S   PN V ++SL++G C   R  +   +F +      EPDV  Y 
Sbjct: 165 EVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 224

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LI+ LC+ G    A  + + M     E      PN VTYN +I+ +CKEG V +A  + 
Sbjct: 225 GLIDSLCKVGKAKKAHGVMDMMVRRGLE------PNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELC 334
            KM ++ + PDVVTY ++I+G     + +EA  L  EM+     V+P+VVTF+ ++  LC
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC 338

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
             G+M +A ++  +M   G   N  TYN LI G     K+  A +L   M S G   D  
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y+ LI  +CK   V+ A  L S M  +GI+P +  Y  L + + E   +ERA  LF+EM
Sbjct: 399 TYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             N+   D   Y+  I G CK+G +  A EL ++I D     + V+Y+ +I+
Sbjct: 459 -DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 166/300 (55%), Gaps = 5/300 (1%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  +YNT++  LCR GH   A  L   M+    E    C+PN V+Y  ++  LC +   D
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A  L   M+   +  DVVTY ++IRG C A + ++A  L  EM + G++P+VV +S ++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
              CK+G+ +   ++   M  +G+ P+   Y  LID  C   K   A  +   M   G  
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +VV+YN LIN  CK   V+EA+ +  +M  KG+ P VVTYNTL  GL ++ +++ A+ L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 451 FDEMRR--NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +EM R  N V  +  T+N+ I GLC  G + +A ++   + ++   +N+V+YN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L     K+  ++ V  +F  ++  G+ PD+  ++ LI+  CK+G+      V
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++R    PN VT+  LI  +C E  + EA  +  K       PDV TYNTLI GL  
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L EEM  G      + KPN VT+N++I GLC  G + +A ++   M++   
Sbjct: 303 VLEMDEAMWLLEEMVRGKN----IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGC 358

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VTY  +I G    +   +A  L  EM   G++PD  T+S+++   CK  ++D+A  
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAED 418

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M  RG+ P  + Y  L+   C    ++ AR LF  M++N  + DVV+Y+T+I+  C
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGAC 477

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D++ A  L   ++ +G+ P  VTY+ +     +   +E A  +  +M  +    D  
Sbjct: 478 KAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVA 537

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
            +++ I G    G + + LEL R +
Sbjct: 538 VFDSLIQGYSTKGEINKVLELIREM 562



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 179/366 (48%), Gaps = 46/366 (12%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVF---ACEPDVFTYNTLINGLCRTGHTIVAL 232
           +AV++ +++  LC       A AL     +    AC P+  +Y  L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L   M +         + + VTY T+I GLC    VDKA EL  +M +  I P+VV Y+
Sbjct: 136 GLLRSMRSAG------VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+++G+C +  W +  ++F+EM ++G++PDVV ++ ++D LCK GK  KA  ++++M+ R
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN  TYN LI+  C    +  A  +   M   G   DVV+YNTLI       +++EA
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 413 LSLYSEMLSKG--IKPTVV-----------------------------------TYNTLF 435
           + L  EM+     +KP VV                                   TYN L 
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL  +H+V +A++L DEM    +  D++TY+  I G CK   V  A +L   +RD   E
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 496 LNIVSY 501
             +  Y
Sbjct: 430 PELFHY 435



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 171/338 (50%), Gaps = 10/338 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  + D M+R     P V ++N+L  C+ K       + + K+++  G+ PD+ T++ L
Sbjct: 238 KAHGVMDMMVR-RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296

Query: 149 INCFCKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I     +  +     +L  ++R      PN VTF S+I+GLC   R+ +A  +       
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEET 356

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C  ++ TYN LI GL R      A+ L +EM +     G+  +P++ TY+ +I G CK 
Sbjct: 357 GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS----LGL--EPDSFTYSILIKGFCKM 410

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             VD+A++L   M+D  I P++  Y  ++   C       A+ LF EM D     DVV +
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAY 469

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++   CK G +  A  LL+ ++  G+ P+  TY+ +I+ +  +  ++ A  +   M +
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +G + DV  +++LI  Y    ++ + L L  EM++K I
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK---GIKPTVVTYNTLFLGLFEIHQVER 446
           + D VSYNT++   C+    + A +L   M  +     +P  V+Y  L   L      ++
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A+ L   MR   V AD  TY   I GLC +  V +A+EL   + +S  E N+V Y+ L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 507 G 507
           G
Sbjct: 194 G 194


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 217/420 (51%), Gaps = 6/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           + + +F  M+      P V + + L   L K +H+   + LF  + + G+ PD+Y ++ +
Sbjct: 174 DGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGV 233

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C++  +S    ++ ++  +    N V +  LI GLC + ++ EA  +         
Sbjct: 234 IRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKEL 293

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY TL+ GLC+     V L + +EM        +   P+    +++++GL K G 
Sbjct: 294 KPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR------LRFSPSEAAVSSLVEGLRKRGK 347

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V++A  L  ++ +  ++P++  Y ++I   C   +++EA+ LF  M   G+ P+ VT+S+
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  C+ GK+D A   L  MI  G+ P+ Y YN+LI+G+C    I  A  L   M +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               VV+Y +L+  YC    + +AL LY EM  KGI P++ T+ TL  GLF    +  A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KLF EM   +V  +  TYN  I+G C+ G + +A E    + +     +  SY  LI GL
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 201/401 (50%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  +N+L   L K +     + + K L    L PD+ T+  L+   CK+     G  ++ 
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +LR  F+P+    +SL++GL    ++ EA  L  +   F   P++F YN LI+ LC+  
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  LF+ M    G+ G+   PN VTY+ +ID  C+ G +D A     +M D  + P
Sbjct: 382 NFDEAELLFDRM----GKIGLC--PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V  Y S+I G C   D + A+ L  EM+++ ++P VVT++ +M   C  GK++KA RL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G+ P+ YT+ TL+ G      I  A KLF  M       + V+YN +I  YC+ 
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++ +A    +EM+ KGI P   +Y  L  GL    Q   A    D + + +   +   Y
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              + G C+ G + EAL + + +     +L++V Y  LIDG
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 219/452 (48%), Gaps = 42/452 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
            L + D MLR+  SP   +  +++ G L K    +  L+L KR+   G+ P+I+ ++ LI
Sbjct: 316 GLEMIDEMLRLRFSPSEAAVSSLVEG-LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALI 374

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK        ++  R+ +    PN VT++ LI   C   ++  A +   +      +
Sbjct: 375 DSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLK 434

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V+ YN+LING C+ G    A +L  EM N   E      P  VTY +++ G C +G +
Sbjct: 435 PSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE------PTVVTYTSLMGGYCSKGKI 488

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +KA  L+ +M  + I P + T+T+++ G   A    +A +LF EM +  V+P+ VT++V+
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  C+ G M KA   L  MI +G+ P+TY+Y  LI G CLT +   A+     +    C
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL------------FLG 437
             + + Y  L++ +C+   +EEALS+  +M  +G+   +V Y  L            FLG
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668

Query: 438 LF-EIH----------------------QVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  E+H                        + A  ++D M       +  TY   I+GLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           K+GFV EA  L   +R      N V+Y C +D
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLD 760



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 223/491 (45%), Gaps = 79/491 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +FD M ++   P  V+ ++IL     +    DT LS    +   GL P +Y ++ 
Sbjct: 384 DEAELLFDRMGKIGLCPNDVT-YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNS 442

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  CK G +S    ++  ++     P  VT+TSL+ G C++ +I +A  L+ +     
Sbjct: 443 LINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P ++T+ TL++GL R G    A+ LF EMA  N       KPN VTYN +I+G C+EG
Sbjct: 503 IVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN------VKPNRVTYNVMIEGYCEEG 556

Query: 268 FVDKAKELFLKMKDENINPDV-----------------------------------VTYT 292
            + KA E   +M ++ I PD                                    + YT
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616

Query: 293 SVIRGFCYANDWNEA-------------------------------KRLFI----EMMDQ 317
            ++ GFC      EA                               +++F+    EM D+
Sbjct: 617 GLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G++PD V ++ ++D   K G   +A  + +LMI  G  PN  TY  +I+G C    ++ A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKN-KDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             L   M     + + V+Y   ++   K   D+++A+ L++ +L KG+     TYN L  
Sbjct: 737 EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIR 795

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G     ++E A +L   M  + V+ D  TY   I  LC+   V +A+EL+ ++ +     
Sbjct: 796 GFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 497 NIVSYNCLIDG 507
           + V+YN LI G
Sbjct: 856 DRVAYNTLIHG 866



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 31/396 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L +       + LF  +    + P+  T++++I  +C+ G +S  F  
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+  ++  LI GLC   +  EA           CE +   Y  L++G CR
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTVT 255
            G    AL++ ++M     +  +VC                             KP+ V 
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVI 684

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y ++ID   K G   +A  ++  M +E   P+ VTYT+VI G C A   NEA+ L  +M 
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744

Query: 316 DQGVQPDVVTFSVIMDELCKN-GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
                P+ VT+   +D L K  G M KA  L    I +G+  NT TYN LI G+C   ++
Sbjct: 745 PGNSVPNQVTYGCFLDILTKGVGDMKKAVELHN-AILKGLLANTATYNMLIRGFCRQGRM 803

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A +L   M  +G   D ++Y T+I+  C+  DV++A+ L++ M  KGI+P  V YNTL
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
             G     ++ +A +L +EM R  +  +T T    I
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 155/377 (41%), Gaps = 65/377 (17%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  M   +  P  V+ +N++     +  +          +   G+ PD Y++  L
Sbjct: 525 DAVKLFTEMAEWNVKPNRVT-YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  G+ S   V +  + +     N + +T L+ G C E ++ EA ++     +   
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM----------------------ANGNGEFG 246
           + D+  Y  LI+G  +     V L L +EM                       +    FG
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 247 VV-------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY-------- 291
           +        C PN VTY  +I+GLCK GFV++A+ L  KM+  N  P+ VTY        
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILT 763

Query: 292 ---------------------------TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
                                        +IRGFC      EA  L   M+  GV PD +
Sbjct: 764 KGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCI 823

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++ ELC+   + KA  L   M  +G+ P+   YNTLI G C+  ++  A +L   M
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 385 ESNGCMHDVVSYNTLIN 401
              G   +  +  T I+
Sbjct: 884 LRQGLKPNTETSETTIS 900


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 207/392 (52%), Gaps = 9/392 (2%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           C+A+    D  + LF ++     FP + T+++LI   C   R S    ++  +  +   P
Sbjct: 299 CVAR--RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  T+T LI  LC++ +  +A  L  +       P+V TYN LING C+ G    A+++ 
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           E M +          PNT TYN +I G CK   V KA  +  KM +  + PDVVTY S+I
Sbjct: 417 ELMESRK------LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G C + +++ A RL   M D+G+ PD  T++ ++D LCK+ ++++A  L + +  +GVN
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN   Y  LIDGYC   K+D A  +   M S  C+ + +++N LI+  C +  ++EA  L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             +M+  G++PTV T   L   L +    + A   F +M  +    D +TY  FI   C+
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            G +L+A ++   +R++    ++ +Y+ LI G
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 208/402 (51%), Gaps = 7/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  +N L   LA+    D +  ++  +    + P+IYT++ ++N +CK+G V      + 
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +I+ +   P+  T+TSLI G C    +  A  +F +  +  C  +   Y  LI+GLC   
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A++LF +M +        C P   TY  +I  LC      +A  L  +M++  I P
Sbjct: 303 RIDEAMDLFVKMKDDE------CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++ TYT +I   C    + +A+ L  +M+++G+ P+V+T++ +++  CK G ++ A  ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           ELM  R ++PNT TYN LI GYC ++ +  A  +   M     + DVV+YN+LI+  C++
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            + + A  L S M  +G+ P   TY ++   L +  +VE A  LFD + +  V  +   Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              IDG CK+G V EA  +   +       N +++N LI GL
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 198/404 (49%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L   L  ++     L+L K +   G+ P+I+T+++LI+  C   +      +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG++L     PN +T+ +LI G C    I +A  +          P+  TYN LI G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +       N+ + M   N        P+ VTYN++IDG C+ G  D A  L   M D  +
Sbjct: 441 S-------NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TYTS+I   C +    EA  LF  +  +GV P+VV ++ ++D  CK GK+D+A  
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE M+ +   PN+ T+N LI G C   K+  A  L   M   G    V +   LI+   
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ D + A S + +MLS G KP   TY T         ++  A  +  +MR N V+ D +
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY++ I G    G    A ++ + +RD+  E +  ++  LI  L
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 199/422 (47%), Gaps = 25/422 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  +   L K+K  +    LF  L   G+ P++  ++ LI+ +CK G+V    ++
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     PN++TF +LI GLCA+ ++ EA  L  K      +P V T   LI+ L +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A + F++M +         KP+  TY T I   C+EG +  A+++  KM++  +
Sbjct: 615 DGDFDHAYSRFQQMLSSG------TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD------------- 331
           +PD+ TY+S+I+G+      N A  +   M D G +P   TF  ++              
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728

Query: 332 --ELCKNGKM---DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ELC    M   D    LLE M+   V PN  +Y  LI G C    +  A K+F  M+ 
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788

Query: 387 N-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           N G     + +N L++  CK K   EA  +  +M+  G  P + +   L  GL++  + E
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           R   +F  + +     D   +   IDG+ K G V    ELF  +  +  + +  +Y+ LI
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908

Query: 506 DG 507
           +G
Sbjct: 909 EG 910



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 191/430 (44%), Gaps = 50/430 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ +L   L     ++    L  ++   GL P++ T++ LIN +CK G +     V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +     +PN  T+  LIKG C +S + +A  +  K       PDV TYN+LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474

Query: 225 TGHTIVALNLFEEMANGNG----------EFGVVCK--------------------PNTV 254
           +G+   A  L   M N  G              +CK                    PN V
Sbjct: 475 SGNFDSAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y  +IDG CK G VD+A  +  KM  +N  P+ +T+ ++I G C      EA  L  +M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +  G+QP V T ++++  L K+G  D A    + M+  G  P+ +TY T I  YC   ++
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  +   M  NG   D+ +Y++LI  Y        A  +   M   G +P+  T+ +L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713

Query: 435 FLGLFEIH------------------QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
              L E+                   + +  ++L ++M  + V  +  +Y   I G+C+ 
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773

Query: 477 GFVLEALELF 486
           G +  A ++F
Sbjct: 774 GNLRVAEKVF 783



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 180/366 (49%), Gaps = 17/366 (4%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +Y+++ L+      G V   F +   +++SC   ++V     +  LC +    E   L  
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K  +  C      YNTL+N L R G       ++ EM         VC PN  TYN +++
Sbjct: 180 K-LIIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK-----VC-PNIYTYNKMVN 226

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G CK G V++A +   K+ +  ++PD  TYTS+I G+C   D + A ++F EM  +G + 
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           + V ++ ++  LC   ++D+A  L   M      P   TY  LI   C +++   A  L 
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ME  G   ++ +Y  LI+  C     E+A  L  +ML KG+ P V+TYN L  G  + 
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             +E A+ + + M    ++ +T TYN  I G CKS  V +A+ +   + + K   ++V+Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465

Query: 502 NCLIDG 507
           N LIDG
Sbjct: 466 NSLIDG 471



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 51/129 (39%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD+M R     P    FN L  C  K K ++    +   +   G  P + +  +LI   
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G    G  V   +L+  +  + + +  +I G+  +  +     LF       C+   
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901

Query: 213 FTYNTLING 221
            TY+ LI G
Sbjct: 902 QTYSLLIEG 910


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 218/403 (54%), Gaps = 7/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L    A     +    L   ++ +G+ PDI+ ++ +I+C  K G++      
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      P+AVTF + I G     ++ EAA  F +       P+   Y  LING  +
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+ + AL++F  +       GV+  P+  T +  I GL K G V +A ++F ++K++ +
Sbjct: 502 AGNLMEALSIFRHLH----ALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV TY+S+I GFC   +  +A  L  EM  +G+ P++  ++ ++D LCK+G + +A +
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 615

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G+ P++ TY+T+IDGYC ++ +  A  LF  M S G       YN L++  C
Sbjct: 616 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC 675

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+E+A++L+ EML KG   T +++NTL  G  +  +++ A +LF EM    +  D  
Sbjct: 676 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 734

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   ID  CK+G + EA  LF+ +++    ++ V+Y  L+ G
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 777



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 216/417 (51%), Gaps = 8/417 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D M + +  P  VS +  +   L   K       L +++  +GL P++  +S LI
Sbjct: 333 ALELLDEMEKRNLVPSAVS-YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 391

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             +   GR+     +L  +  S   P+   + ++I  L    ++ EA+    + +    +
Sbjct: 392 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 451

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD  T+   I G  +TG    A   F+EM     + G++  PN   Y  +I+G  K G +
Sbjct: 452 PDAVTFGAFILGYSKTGKMTEAAKYFDEML----DHGLM--PNNPLYTVLINGHFKAGNL 505

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  +F  +    + PDV T ++ I G        EA ++F E+ ++G+ PDV T+S +
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G+++KA  L + M  +G+ PN + YN L+DG C +  I  ARKLF  M   G 
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D V+Y+T+I+ YCK+++V EA SL+ EM SKG++P    YN L  G  +   +E+A+ 
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 685

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           LF EM +   A  T ++N  IDG CKS  + EA +LF+ +   +   + V+Y  +ID
Sbjct: 686 LFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 213/421 (50%), Gaps = 9/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA   F+ M +    P   ++ + L     +    D VL +   + S G+  ++ T+++
Sbjct: 226 NEAKLTFEEMQKTGLKPD-YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 284

Query: 148 LINCFCKMGRVSHGFVVL-GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK G++     +L G I   C  PN+ TF  LI+G C E  +  A  L  +    
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 343

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P   +Y  +INGLC      +A  L E+M           KPN V Y+T+I G   E
Sbjct: 344 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSTLIMGYASE 397

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A+ L   M    + PD+  Y ++I     A    EA    +E+  +G++PD VTF
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
              +    K GKM +A++  + M+  G+ PN   Y  LI+G+     +  A  +F  + +
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + DV + +  I+   KN  V+EAL ++SE+  KG+ P V TY++L  G  +  +VE+
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +L DEM    +A + + YN  +DGLCKSG +  A +LF  + +   E + V+Y+ +ID
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637

Query: 507 G 507
           G
Sbjct: 638 G 638



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 205/401 (51%), Gaps = 7/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N +  CL+K    +   +    +   GL PD  T    I  + K G+++     
Sbjct: 417 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 476

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     PN   +T LI G      +MEA ++F         PDV T +  I+GL +
Sbjct: 477 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 536

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL +F E+     E G+V  P+  TY+++I G CK+G V+KA EL  +M  + I
Sbjct: 537 NGRVQEALKVFSELK----EKGLV--PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++  Y +++ G C + D   A++LF  M ++G++PD VT+S ++D  CK+  + +A  
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  +GV P+++ YN L+ G C    ++ A  LF  M   G     +S+NTLI+ YC
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYC 709

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  ++EA  L+ EM++K I P  VTY T+     +  ++E A  LF EM+  ++  DT 
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY + + G  K G   E   LF  +     + + V+Y  +I
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 810



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 204/405 (50%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ I+   L + K  +     F+ +   GL PD    S LI+ F + G +    + 
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE-VLR 265

Query: 165 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  ++ SC  P N +T+  LI GLC   ++ +AA +        C+P+  T+  LI G C
Sbjct: 266 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R  +   AL L +EM   N        P+ V+Y  +I+GLC    +  A +L  KM    
Sbjct: 326 REHNMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+VV Y+++I G+       EA+RL   M   GV PD+  ++ I+  L K GKM++AS
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L  +  RG+ P+  T+   I GY  T K+  A K F  M  +G M +   Y  LIN +
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  ++ EALS++  + + G+ P V T +    GL +  +V+ ALK+F E++   +  D 
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +TY++ I G CK G V +A EL   +       NI  YN L+DGL
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 198/402 (49%), Gaps = 8/402 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL IF + L      P V + +     L KN      L +F  L   GL PD++T+S L
Sbjct: 507 EALSIFRH-LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK G V   F +   +      PN   + +L+ GLC    I  A  LF        
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           EPD  TY+T+I+G C++ +   A +LF EM +         +P++  YN ++ G CKEG 
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG------VQPHSFVYNALVHGCCKEGD 679

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++KA  LF +M  +      +++ ++I G+C +    EA +LF EM+ + + PD VT++ 
Sbjct: 680 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK GKM++A+ L + M  R +  +T TY +L+ GY    +      LF  M + G
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D V+Y  +I  +CK  ++ EA  L  E++ KG+      ++ L   L +   +  A 
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           KL DEM    +       +  +    ++G + EA  +F  ++
Sbjct: 859 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 900



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 200/423 (47%), Gaps = 42/423 (9%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG---- 161
           P SS +IL          D+VL  F+  N  G  P ++   ILI+ + +MG +       
Sbjct: 134 PYSSSSIL----------DSVLFWFR--NYGGSSPVVF--DILIDSYKRMGMLDEAANVF 179

Query: 162 FV-----VLGRILR---------SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           FV     +L  ++R             PN  T+T +  GLC   R+ EA   F + +   
Sbjct: 180 FVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 239

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--KPNTVTYNTIIDGLCK 265
            +PD    + LI+G  R G     L + + M        V C    N +TYN +I GLCK
Sbjct: 240 LKPDYNACSALIDGFMREGDIDEVLRIKDVM--------VSCGIPINLITYNVLIHGLCK 291

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G ++KA E+   M      P+  T+  +I G+C  ++   A  L  EM  + + P  V+
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +  +++ LC    +  A++LLE M + G+ PN   Y+TLI GY    +I+ AR+L   M 
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +G   D+  YN +I+   K   +EEA +   E+  +G+KP  VT+    LG  +  ++ 
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K FDEM  + +  +   Y   I+G  K+G ++EAL +FR +       ++ + +  I
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531

Query: 506 DGL 508
            GL
Sbjct: 532 HGL 534



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 170/342 (49%), Gaps = 19/342 (5%)

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            T +I+   + S I+++  LF         P VF  + LI+   R G    A N+F    
Sbjct: 127 LTQMIRTPYSSSSILDSV-LFWFRNYGGSSPVVF--DILIDSYKRMGMLDEAANVFFVAK 183

Query: 240 NGN--------------GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           N +              GE G+V  PNT TY  I  GLC+   +++AK  F +M+   + 
Sbjct: 184 NDSILISLIRCNSLRSMGEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 241

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PD    +++I GF    D +E  R+   M+  G+  +++T++V++  LCK GKM+KA+ +
Sbjct: 242 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 301

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L+ MI  G  PN+ T+  LI+GYC    +  A +L   ME    +   VSY  +IN  C 
Sbjct: 302 LKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 361

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            KD+  A  L  +M   G+KP VV Y+TL +G     ++E A +L D M  + VA D + 
Sbjct: 362 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I  L K+G + EA      I+    + + V++   I G
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 463


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 216/421 (51%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  I  ++      P   +  +++ G   KN + D    +F R+   G  P+  T+S 
Sbjct: 219 QEAELIMGHIFHYGACPDTFTYTSLIIG-HCKNGNLDLAFEMFDRMVKDGCDPNSVTYSA 277

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  GR+     +L  ++     P    +T  I  LC   R  EA  L  K +   
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRG 337

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+V TY  LI+GL R G   VA+ ++ +M       G+V  P  VTY+ +I+ L  EG
Sbjct: 338 CGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD----GLV--PTAVTYSALINQLYVEG 391

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A  +F  M   +  P+  TY  +I+GFC      +A  +F +M+  G  P+V+T++
Sbjct: 392 RFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYN 451

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+    K G M+ A RLLE+M   G+  +T+TY  LI G+    K++HA  LF  M  +
Sbjct: 452 IIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH 511

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VV+YN +IN Y     V++AL+L+ +M+  G  P+  TYN +  G  + +++  A
Sbjct: 512 GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                +M +  +  +  TY +FIDGLCK+G    A ++F  ++   Y  N+ +Y+ LIDG
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631

Query: 508 L 508
           L
Sbjct: 632 L 632



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 242/510 (47%), Gaps = 35/510 (6%)

Query: 23  NFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDI 82
           NFSS  PH   P S IS N   +P   SK+   L     +R+S    L  + K      +
Sbjct: 27  NFSSQ-PHPSSPLS-ISSNTDPFPELVSKISIILSSPTWERSSELSHLIPKLKP--HHVV 82

Query: 83  NLITPN----EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY--------------- 123
           NL+  +      L  F ++ R H     +S F  +   L +++ +               
Sbjct: 83  NLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCR 142

Query: 124 -----DTVLSLFKRLNSAGLFP-DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
                  V+ +   +N+   F   +Y+ S L+    K      G  V   +L S   PN 
Sbjct: 143 NEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNL 202

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
            TF ++IK LC + ++ EA  +      +   PD FTY +LI G C+ G+  +A  +F+ 
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M          C PN+VTY+ +I+GLC EG +++A ++  +M D+ I P V  YT  I  
Sbjct: 263 MVKDG------CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVS 316

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C A    EA +L  +M  +G  P+V T++ ++  L ++GK + A  +   M+  G+ P 
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             TY+ LI+   +  + + A  +F  M S+  + +  +YN +I  +C    +++A +++ 
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +ML  G  P V+TYN +    F+   +  A++L + M+ N +  DT+TY N I G  + G
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGG 496

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  A  LF  + +     N+V+YN +I+G
Sbjct: 497 KLEHAFSLFNEMVEHGISPNVVTYNAIING 526



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 198/404 (49%), Gaps = 10/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ L   L     ++T L++F+ + S    P+  T++++I  FC +G +     +
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L++  +PN +T+  +I     +  +  A  L    +    + D +TY  LI+G  R
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSR 494

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +LF EM     E G+   PN VTYN II+G      VD A  LF KM +   
Sbjct: 495 GGKLEHAFSLFNEMV----EHGI--SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TY  +I GF   N  +EA+    +M+ QG+ P+V+T++  +D LCKNG+   A +
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK 608

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M  R   PN  TY++LIDG C   + + A +L      +GC  +V +Y TL+   C
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLC 664

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
                 EA  L   M  KG++P+   Y  L +G  +  +VE ALK+FD M          
Sbjct: 665 GKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLS 724

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   I  LCK+ F  +A  +F+ +    +  + V +  L+DGL
Sbjct: 725 DYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGL 768



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 201/408 (49%), Gaps = 11/408 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL IF++ML  H S P   ++N++        +     ++F ++  AG  P++ T++I+I
Sbjct: 396 ALTIFEWMLS-HDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + + K G +++   +L  +  +    +  T+ +LI G     ++  A +LF +       
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V TYN +ING         AL LF +M     E G V  P++ TYN +I G  K   +
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMV----ESGNV--PSSGTYNMMISGFSKTNRI 568

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A+    KM  + + P+V+TYTS I G C     + A ++F EM  +   P++ T+S +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LC+ G+ + A RLL+     G  PN  TY TL+ G C   +   A +L  SM+  G 
Sbjct: 629 IDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGL 684

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
                 Y  L+   CKN +VE AL ++  M++ G +P +  Y  L   L + +  ++A  
Sbjct: 685 QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQC 744

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           +F  M + H  +D   +   +DGL K G    +LEL   +      LN
Sbjct: 745 MFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLN 792



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 188/368 (51%), Gaps = 11/368 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  IFD ML+  PSP  V ++NI+     K  + +  + L + +   GL  D +T++ 
Sbjct: 429 QKATAIFDQMLKAGPSPN-VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F + G++ H F +   ++    +PN VT+ ++I G    +++ +A ALF K     
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   TYN +I+G  +T     A N   +M       G++  PN +TY + IDGLCK G
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ----GLL--PNVITYTSFIDGLCKNG 601

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A ++F +MK  +  P++ TY+S+I G C      +A+RL    +D G +P+V T++
Sbjct: 602 RTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL----LDDGCEPNVDTYT 657

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LC  G+  +A +L+E M  +G+ P+   Y  L+ G C   +++ A K+F SM + 
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    +  Y  LI   CK    ++A  ++  ML K      V +  L  GL +  + + +
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777

Query: 448 LKLFDEMR 455
           L+L   M 
Sbjct: 778 LELLHVME 785



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 199/404 (49%), Gaps = 10/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L+++  ++  + ++ ++ + GL P   T+S LIN     GR      +
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI 399

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     PN  T+  +IKG C+   I +A A+F +       P+V TYN +I+   +
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFK 459

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+ L E M  GNG      K +T TY  +I G  + G ++ A  LF +M +  I
Sbjct: 460 QGYMNNAMRLLE-MMKGNG-----LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+VVTY ++I G+      ++A  LF +M++ G  P   T+++++    K  ++ +A  
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
               M+ +G+ PN  TY + IDG C   +   A K+F  M+      ++ +Y++LI+  C
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    E+A      +L  G +P V TY TL  GL    +   A +L + M++  +     
Sbjct: 634 QEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   + G CK+  V  AL++F ++  + ++  +  Y  LI  L
Sbjct: 690 IYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 111/202 (54%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
            + ++IEM++ G++P++ TF+ ++  LC  GK+ +A  ++  +   G  P+T+TY +LI 
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    +D A ++F  M  +GC  + V+Y+ LIN  C    +EEA+ +  EM+ KGI+P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           TV  Y    + L +  +   A+KL  +M++     +  TY   I GL + G    A+ ++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +         V+Y+ LI+ L
Sbjct: 366 HKMLADGLVPTAVTYSALINQL 387



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 105/281 (37%), Gaps = 69/281 (24%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G + +   ++AL +F  M+    + P   ++N++    +K        +   ++   GL 
Sbjct: 526 GYLTVAKVDDALALFWKMVE-SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL 584

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T++  I+  CK GR S  F +   + +  + PN  T++SLI GLC E +  +A  L
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644

Query: 200 FTKHRVFACEPDVFTYNTLINGL-----------------------------------CR 224
                   CEP+V TY TL+ GL                                   C+
Sbjct: 645 LDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCK 700

Query: 225 TGHTIVALNLFEEMANGNGE---------FGVVCKPN--------------------TVT 255
                 AL +F+ M     +            +CK N                     V 
Sbjct: 701 NLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVV 760

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           +  ++DGL KEG  D + EL   M+  N   +  T   + R
Sbjct: 761 WTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLAR 801



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 2/183 (1%)

Query: 328 VIMDELCKN-GKMDKASRLL-ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++M + C+N G++ +  ++L E+          Y+++TL+      D     R +++ M 
Sbjct: 135 ILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEML 194

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++G   ++ ++N +I   C    V+EA  +   +   G  P   TY +L +G  +   ++
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A ++FD M ++    ++ TY+  I+GLC  G + EA+++   + D   E  + +Y   I
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPI 314

Query: 506 DGL 508
             L
Sbjct: 315 VSL 317


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 220/398 (55%), Gaps = 14/398 (3%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L K    D+ LSL + +   G  PD+ THS+LIN  CK  ++      L  + R   + +
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRS 443

Query: 177 AVT--FTSLIKGLCAESRIMEAAALFT---KHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
           +    + SL+  LC   ++ +A A+F+     R F   PDV +Y+ LI+G C+      A
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV--PDVVSYSILIDGFCKIDELGRA 501

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             L+++M + N      C PN  TYN  ++GL ++G +  A+ ++ +M     +PDV+TY
Sbjct: 502 EKLYKQMIDLN------CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITY 555

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           +++I GF  A   ++A  LF  M+ +G +P+ VT++ ++  LCK  K D+A  L   M+ 
Sbjct: 556 STLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           RG +P+  TY TL+ G+C   KI+ A ++F  M S G   DVV+YN L+  + +     E
Sbjct: 616 RGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 675

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFI 470
           A  L+  M+S+  KP  V++N +  GL +  +++ A+++F+ M ++H  + D  TYN+ I
Sbjct: 676 AKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 735

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            GLC    + EA+++F+ I   K   +  ++N L++ +
Sbjct: 736 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 205/409 (50%), Gaps = 10/409 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S  PV  +++L   L ++   D        +    + P   T   +I   CK GRV    
Sbjct: 337 SSQPV--YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSAL 394

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--KHRVFACEPDVFTYNTLIN 220
            +L  +++  + P+  T + LI  LC   +I EA         ++ +     F+YN+L+N
Sbjct: 395 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLN 454

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LC+      A  +F  M +   E   V  P+ V+Y+ +IDG CK   + +A++L+ +M 
Sbjct: 455 SLCKAKKVHQAFAIFSTMVS---ERSFV--PDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D N  P+V TY + + G        +A+ ++ EM+  G  PDV+T+S ++       K D
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  L E MI RG  PN  TYN L+ G C   K D A +LF  M   GC  D V+Y TL+
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
             +C    +E+A+ ++ EM+SKG  P VV YN L  G F   +   A +LF  M      
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCK 689

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDGL 508
            DT ++N  IDGL K+  + +A+E+F R  +D     ++V+YN LI GL
Sbjct: 690 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 215/466 (46%), Gaps = 49/466 (10%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           +L    EAL  F + L+       V ++N L   L +++       +F+++ + G+ P+ 
Sbjct: 106 HLRDGGEALTFFRW-LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNG 164

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA------------- 189
           +T+++L+   C            G ++   F P++  +  + + L A             
Sbjct: 165 FTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGR 224

Query: 190 ----------------------ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
                                 + + +EA+ LF       C+PD   Y+ ++   C+  +
Sbjct: 225 DLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLEN 284

Query: 228 TIVALNLFEEMANGNGEFGVVCKP--NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
              A  LF EMA       V  K   N V +   + GLCK G +++A E    M+ E+++
Sbjct: 285 LDEAFKLFLEMA-------VESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLS 336

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
                Y  +IR    +   ++A+   +E+  + +QP   T   ++ ELCK G++D A  L
Sbjct: 337 SSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSL 396

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN--GCMHDVVSYNTLINWY 403
           LE MI RG  P+  T++ LI+  C  DKI  A++    M+           SYN+L+N  
Sbjct: 397 LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSL 456

Query: 404 CKNKDVEEALSLYSEMLS-KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           CK K V +A +++S M+S +   P VV+Y+ L  G  +I ++ RA KL+ +M   +   +
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 516

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN F++GL + G + +A  ++  +  +    ++++Y+ LI G 
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGF 562



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 7/315 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  IF  M+      P V S++IL     K         L+K++      P++ T++ 
Sbjct: 463 HQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 522

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +N   + GR++    V   ++ +  +P+ +T+++LI G     +  +A  LF       
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TYN L++GLC+      A  LF +M          C P+ VTY T++ G C  G
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG------CDPDRVTYTTLLYGFCNVG 636

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A E+F +M  +  +PDVV Y  +++GF  A    EAK+LF  M+ +  +PD V+ +
Sbjct: 637 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHN 696

Query: 328 VIMDELCKNGKMDKASRLLELMIW-RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++D L K  ++D A  + E M    G +P+  TYN+LI G C   ++  A K+F  ++ 
Sbjct: 697 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756

Query: 387 NGCMHDVVSYNTLIN 401
                D  ++N L+ 
Sbjct: 757 LKLSPDPHAFNVLLE 771



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 30/259 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+++N     L +         +++ + +AG  PD+ T+S LI+ F    +      +
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PNAVT+  L+ GLC ES+  EA  LF K     C+PD  TY TL+ G C 
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634

Query: 225 TGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTVT 255
            G    A+ +F+EM +   +  VV                             CKP+TV+
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694

Query: 256 YNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           +N +IDGL K   +D A E+F +M +D   +PD+VTY S+I G C     +EA ++F E+
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754

Query: 315 MDQGVQPDVVTFSVIMDEL 333
               + PD   F+V+++ +
Sbjct: 755 DRLKLSPDPHAFNVLLEAI 773



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 4/145 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G  N+    +A+ +FD M+      P V ++N L     +         LF+ + S    
Sbjct: 631 GFCNVGKIEQAVEVFDEMVS-KGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCK 689

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAA 197
           PD  +H+I+I+   K  R+     V  R+ +   C +P+ VT+ SLI GLC E R+ EA 
Sbjct: 690 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC-SPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 198 ALFTKHRVFACEPDVFTYNTLINGL 222
            +F +       PD   +N L+  +
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEAI 773


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 207/413 (50%), Gaps = 14/413 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +    LFK +   G+ PD+YT++ILI+CF K G +      
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++R    P  VT+T+LI       ++  A  LF       C P+V TY  LI+G C+
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 225 TGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +G+   A  ++  M  G+ +             V  KPN VTY  ++DGLCK   V  A+
Sbjct: 607 SGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  +   P+ + Y ++I GFC A   +EA+ +F +M+++G  P+V T+S ++D L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D   ++L  M+     PN   Y  +IDG     K D A KL + ME  GC  +V
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K   V++ L L+ EM SKG  P  VTY  L         ++ A  L +E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           M++ +      +Y   I+G  K  F+L +L L   +  +     I+ Y  LID
Sbjct: 846 MKQTYWPKHVSSYCKVIEGY-KREFIL-SLGLLEEVEKNGSAPTILLYKVLID 896



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 197/459 (42%), Gaps = 59/459 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC----KMGRVSH 160
           P    +N +   L +   ++  +    R+ S    P++ T+ IL+ C C    ++GR   
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILL-CGCLNKKQLGRCKR 364

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              ++  I   C+ P+   F SL+   C       A  L  K     C+P    YN LI 
Sbjct: 365 ILSMM--IAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG 421

Query: 221 GLCRTGHTI--VALNLFEEMAN----------------------GNGEFGVVCK------ 250
            +C  G     V   L E+  N                      G G+F    K      
Sbjct: 422 SICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM 481

Query: 251 -----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
                P+T TY+ +I  LC    V+ A  LF +MK   + PDV TYT +I  F  A    
Sbjct: 482 GNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 541

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +A     EM+  G +P VVT++ ++    K  K+  A+ L ELMI +G  PN  TY  LI
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDV----------------VSYNTLINWYCKNKDV 409
           DGYC +  I+ A +++  M  +  + DV                V+Y  L++  CK   V
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A  L   M   G +P  + Y+ L  G  +  +++ A ++F +M       + YTY++ 
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSL 721

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ID L K   +   L++   + ++    NIV Y  +IDGL
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 31/426 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    DT   + + ++  GL  D +T        CK+G+       
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA--- 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I +  F PN + +  +I GLC  S   EA     + R  +C P+V TY  L+ G C 
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-CL 354

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +        M    G     C P+   +N+++   CK      A +L  KM+    
Sbjct: 355 NKKQLGRCKRILSMMIAEG-----CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC 409

Query: 285 NPDVVTYTSVIRGFCYAND------WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            P  V Y  +I   C   +      +  A++ + EM+  G   + V        LC  GK
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            +KA +++  M+  G  P+T TY+ +I   C   ++++A  LF  M+  G + DV +Y  
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI+ + K   +++A +   EM+  G +PTVVTY TL     +  +V  A +LF+ M    
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIR--------DSKYEL--------NIVSYN 502
              +  TY   IDG CKSG + +A +++  +R        D  +++        N+V+Y 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 503 CLIDGL 508
            L+DGL
Sbjct: 650 ALVDGL 655



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 10/313 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    ++ L     K    D    +F ++   G  P++YT+S LI+   K  R+     V
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L +   PN V +T +I GL   ++  EA  L        C+P+V TY  +I+G  +
Sbjct: 738 LSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGK 797

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     L LF EM +        C PN VTY  +I+  C  G +D+A  L  +MK    
Sbjct: 798 AGKVDKCLELFREMGSKG------CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 851

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              V +Y  VI G  Y  ++  +  L  E+   G  P ++ + V++D   K G+++ A  
Sbjct: 852 PKHVSSYCKVIEG--YKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALE 909

Query: 345 LLELMIWRGVN--PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           L + +I   ++       Y +LI  +    KIDHA +LF  M  +G + D+ ++  L+  
Sbjct: 910 LHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMG 969

Query: 403 YCKNKDVEEALSL 415
             + +  EEAL L
Sbjct: 970 LIRVRRWEEALQL 982



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 29/280 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K+K  D VL +  ++      P+I  ++ +I+   K+ +    + +
Sbjct: 713 PNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL 772

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN VT+T++I G     ++ +   LF +     C P+  TY  LIN  C 
Sbjct: 773 MLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA 832

Query: 225 TGHTIVALNLFEEMANGNGEFGV--VCK-------------------------PNTVTYN 257
           TGH   A  L EEM        V   CK                         P  + Y 
Sbjct: 833 TGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYK 892

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVT--YTSVIRGFCYANDWNEAKRLFIEMM 315
            +ID   K G ++ A EL  ++   +++       YTS+I  F YA+  + A  LF +M+
Sbjct: 893 VLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMI 952

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
             GV PD+ TF  ++  L +  + ++A +L + +    +N
Sbjct: 953 RDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 3/221 (1%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N +I   C+ G  + A E   ++KD    P  +TY ++++ F  A+  + A+ +  EM +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G+  D  T       LCK GK  +A  L+E        PNT  YN +I G C     + 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEE 326

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A      M S  C+ +V +Y  L+      K +     + S M+++G  P+   +N+L  
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
              +      A KL  +M +         YN  I  +C  G
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGG 427



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N LI   C+N     AL     +   G KPT +TYN L        +++ A  +  EM  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ++ D +T   F   LCK G   EAL L   I    +  N + YN +I GL
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGL 318


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 207/419 (49%), Gaps = 6/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M R     P   S++IL   L +    +    L  ++   G  P   T+++L
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C  G +   F +   ++     PN  T+T LI GLC + +I EA  +  K      
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V TYN LING C+ G  + A  L   M          CKPN  T+N +++GLC+ G 
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGK 421

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             KA  L  +M D  ++PD+V+Y  +I G C     N A +L   M    ++PD +TF+ 
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I++  CK GK D AS  L LM+ +G++ +  T  TLIDG C   K   A  +  ++    
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            +    S N +++   K   ++E L++  ++   G+ P+VVTY TL  GL     +  + 
Sbjct: 542 MLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSF 601

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++ + M+ +    + Y Y   I+GLC+ G V EA +L  A++DS    N V+Y  ++ G
Sbjct: 602 RMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ +L   L      D   +LF  + + G  P+++T+++LI+  C+ G++     V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++    P+ +T+ +LI G C + R++ A  L T     AC+P+V T+N L+ GLCR
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++L + M + NG       P+ V+YN +IDGLC+EG ++ A +L   M   ++
Sbjct: 419 VGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDL 472

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+T++I  FC     + A      M+ +G+  D VT + ++D +C  GK   A  
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE ++   +    ++ N ++D      K+     +   +   G +  VV+Y TL++   
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ D+  +  +   M   G  P V  Y  +  GL +  +VE A KL   M+ + V+ +  
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   + G   +G +  ALE  RA+ +  YELN   Y+ L+ G
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRG 695



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 198/402 (49%), Gaps = 11/402 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  +   L KN + +       ++   G   D +  + L+  FC+   +     V   + 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 170 R--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           R  +C  PN+V+++ LI GLC   R+ EA  L  +     C+P   TY  LI  LC  G 
Sbjct: 258 REGTC-APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 228 TIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              A NLF+EM A G       CKPN  TY  +IDGLC++G +++A  +  KM  + I P
Sbjct: 317 IDKAFNLFDEMIARG-------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFP 369

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V+TY ++I G+C       A  L   M  +  +P+V TF+ +M+ LC+ GK  KA  LL
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+  G++P+  +YN LIDG C    ++ A KL  SM S     D +++  +IN +CK 
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQ 489

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              + A +    ML KGI    VT  TL  G+  + +   AL + + + +  +    ++ 
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSL 549

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N  +D L K   + E L +   I       ++V+Y  L+DGL
Sbjct: 550 NVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 140/256 (54%), Gaps = 1/256 (0%)

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           + Y TI++ LCK G+ + A+    K+       D    TS++ GFC   +  +A ++F  
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255

Query: 314 MMDQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           M  +G   P+ V++S+++  LC+ G++++A  L + M  +G  P+T TY  LI   C   
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            ID A  LF  M + GC  +V +Y  LI+  C++  +EEA  +  +M+  GI P+V+TYN
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  G  +  +V  A +L   M +     +  T+N  ++GLC+ G   +A+ L + + D+
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 493 KYELNIVSYNCLIDGL 508
               +IVSYN LIDGL
Sbjct: 436 GLSPDIVSYNVLIDGL 451



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 194/441 (43%), Gaps = 52/441 (11%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +A+ +   ML    SP  VS +N+L   L +  H +    L   +NS  L PD  T +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVS-YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFT 480

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKH 203
            +IN FCK G+       LG +LR   + + VT T+LI G+C   +  +A  +     K 
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKM 540

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
           R+      +     +++  C+    +  L    ++       G+V  P+ VTY T++DGL
Sbjct: 541 RMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKL-------GLV--PSVVTYTTLVDGL 591

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + G +  +  +   MK     P+V  YT +I G C      EA++L   M D GV P+ 
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK---------- 373
           VT++V++     NGK+D+A   +  M+ RG   N   Y++L+ G+ L+ K          
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI 711

Query: 374 ---IDHARKLFVSM------------------ESNGCMHDVV--------SYNTLINWYC 404
              I    +L  S                   ESNG +  ++        + + ++  YC
Sbjct: 712 KELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYC 771

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             K   + + L + +L  G  P+  ++  +  GL +    ERA +L  E+  ++   +  
Sbjct: 772 SKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKS 831

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
               +++ L ++G   E ++L
Sbjct: 832 GVLPYVECLMETGDCSEVIDL 852



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 39/248 (15%)

Query: 300 YANDWNEAKRLFIEMMDQG---VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           Y  D  +  +L   ++  G   V  DV+   +     C+   +   S   EL    G   
Sbjct: 99  YCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRL 158

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK--------- 407
           N   Y++L+      D    A   +  ME++G +  ++ Y T++N  CKN          
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 408 --------------------------DVEEALSLYSEMLSKGI-KPTVVTYNTLFLGLFE 440
                                     ++ +AL ++  M  +G   P  V+Y+ L  GL E
Sbjct: 219 CKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCE 278

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           + ++E A  L D+M        T TY   I  LC  G + +A  LF  +     + N+ +
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHT 338

Query: 501 YNCLIDGL 508
           Y  LIDGL
Sbjct: 339 YTVLIDGL 346


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 201/370 (54%), Gaps = 7/370 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++ ++ +I+ FCK  RV H   VL R+ +  F P+ VT+  LI   C   R+  A  +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C+P V TY  LI      G    A+ L +EM +         +P+  TYN +
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG------LRPDRYTYNVV 257

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ++G+CKEG +D+A E   ++        V TY  ++R       W   ++L  +M+ +G 
Sbjct: 258 VNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGC 317

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P+ +T+S ++  LC++GK+D+A  +L++M  + + P+ Y+Y+ LI   C   K+D A +
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
               M S G + D++SYN+++   CKN + +EAL+++ ++   G  P   +YNTLF  L+
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALW 437

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-KYELNI 498
                 RAL +  EM  N +  D  TYN+ I  LC+ G V +A+EL   + +S K +  +
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497

Query: 499 VSYNCLIDGL 508
           +SYN ++ GL
Sbjct: 498 ISYNTVLLGL 507



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 217/443 (48%), Gaps = 34/443 (7%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           C    +G  N+    +A+ + + +L  H   P V ++N +     K    D    +  R+
Sbjct: 115 CTKLIKGFFNMKKIEKAIQVME-ILEKH-GKPDVFAYNAVISGFCKADRVDHASKVLDRM 172

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
              G  PD+ T++ILI  FC  GR+     V+ ++L+    P  +T+T LI+    +  I
Sbjct: 173 KKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGI 232

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA-------------- 239
            EA  L  +       PD +TYN ++NG+C+ G    A      ++              
Sbjct: 233 DEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNIL 292

Query: 240 ------NGNGEFGVV---------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  G  E+G           C+PN +TY+T+I  LC++G +D+AK +   MK++ +
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKAL 352

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y  +I   C     + A     +M+  G  PD+++++ I+  LCKNG  D+A  
Sbjct: 353 APDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALN 412

Query: 345 LLELMIWRGVNPNTYTYNTLIDG-YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           + E +   G  PN  +YNTL    +   DKI  A  + + M SNG   D ++YN+LI+  
Sbjct: 413 IFEKLGEVGCPPNAGSYNTLFGALWSSGDKI-RALGMILEMLSNGIDPDEITYNSLISCL 471

Query: 404 CKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           C++  V++A+ L  +M  S+  +PTV++YNT+ LGL ++ ++  A+++   M       +
Sbjct: 472 CRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPN 531

Query: 463 TYTYNNFIDGLCKSGFVLEALEL 485
             TY   I G+  +G+  +A+EL
Sbjct: 532 ETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 10/256 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ML     P P++ ++ L   L ++   D   ++ K +    L PD Y++  LI+  C+ G
Sbjct: 312 MLVKGCEPNPIT-YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREG 370

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +V      L  ++     P+ +++ S++  LC      EA  +F K     C P+  +YN
Sbjct: 371 KVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYN 430

Query: 217 TLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           TL   L  +G  I AL +  EM +NG         P+ +TYN++I  LC++G VD+A EL
Sbjct: 431 TLFGALWSSGDKIRALGMILEMLSNG-------IDPDEITYNSLISCLCRDGLVDQAIEL 483

Query: 276 FLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
            + M + E   P V++Y +V+ G C      +A  +   M+++G  P+  T+++++  + 
Sbjct: 484 LVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIG 543

Query: 335 KNGKMDKASRLLELMI 350
             G    A  L  L++
Sbjct: 544 FAGWRYDAMELANLLV 559


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 223/428 (52%), Gaps = 14/428 (3%)

Query: 88  NEALCIFDYM----LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           +  L  +DY+    + M+ SP  +S FN++   L K +  D  + +F+ +      PD Y
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLS-FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+  L++  CK  R+    ++L  +     +P+ V +  LI GLC +  +     L    
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            +  C P+  TYNTLI+GLC  G    A++L E M +        C PN VTY T+I+GL
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGL 337

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K+     A  L   M++   + +   Y+ +I G        EA  L+ +M ++G +P++
Sbjct: 338 VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI 397

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V +SV++D LC+ GK ++A  +L  MI  G  PN YTY++L+ G+  T   + A +++  
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  GC  +   Y+ LI+  C    V+EA+ ++S+ML+ GIKP  V Y+++  GL  I  
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517

Query: 444 VERALKLFDEM---RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           ++ ALKL+ EM          D  TYN  +DGLC    +  A++L  ++ D   + ++++
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577

Query: 501 YNCLIDGL 508
            N  ++ L
Sbjct: 578 CNTFLNTL 585



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 204/421 (48%), Gaps = 31/421 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M     SP PV  +N+L   L K      V  L   +   G  P+  T++ 
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  G++     +L R++ S   PN VT+ +LI GL  + R  +A  L +      
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +   Y+ LI+GL + G    A++L+ +MA         CKPN V Y+ ++DGLC+EG
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG------CKPNIVVYSVLVDGLCREG 411

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++AKE+  +M      P+  TY+S+++GF       EA +++ EM   G   +   +S
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--- 384
           V++D LC  G++ +A  +   M+  G+ P+T  Y+++I G C    +D A KL+  M   
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT----------- 433
           E      DVV+YN L++  C  KD+  A+ L + ML +G  P V+T NT           
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591

Query: 434 ----------LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
                     L + L +  +V  A  + + M   ++A  T T+   +  +CK   +  A+
Sbjct: 592 CDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651

Query: 484 E 484
           +
Sbjct: 652 D 652



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 11/405 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           SF ++F    K    D  + LF R+ +       + + + ++N     G    G      
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 168 ILRSCF----TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ S      +PN ++F  +IK LC    +  A  +F       C PD +TY TL++GLC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +      A+ L +EM +        C P+ V YN +IDGLCK+G + +  +L   M  + 
Sbjct: 234 KEERIDEAVLLLDEMQSEG------CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+ VTY ++I G C     ++A  L   M+     P+ VT+  +++ L K  +   A 
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           RLL  M  RG + N + Y+ LI G     K + A  L+  M   GC  ++V Y+ L++  
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+     EA  + + M++ G  P   TY++L  G F+    E A++++ EM +   + + 
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + Y+  IDGLC  G V EA+ ++  +     + + V+Y+ +I GL
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 202/369 (54%), Gaps = 6/369 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +         ++    +FK +    L PD YT++  I+  CK  R+     V
Sbjct: 250 PNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGV 309

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L S   PNAVT+ +LI G C +  + +A A   +         VFTYN LI+ L  
Sbjct: 310 LCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFL 369

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++ +EM     E GV  +P+ VTYN  I+G C+ G   KA  LF +M ++NI
Sbjct: 370 EKRIEEAEDMIKEMR----EKGV--EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI 423

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V TYTS+I  F   N  +EA+  F + + +G+ PD++ F+ ++D  C NG +D+A +
Sbjct: 424 RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQ 483

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M    V P+  T+NTL+ GYC   K++ A+KL   M+  G   D +SYNTLI+ Y 
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYS 543

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+++AL ++ EMLS G  PT++TYN L  G  +I + + A +L  EM+   +  D  
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDS 603

Query: 465 TYNNFIDGL 473
           TY   I+ +
Sbjct: 604 TYLYVIEAM 612



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 213/419 (50%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +++ M++M+     + +FNI+   L +   +         +   G+ P++ T++ +I
Sbjct: 201 AWFVYEEMVKMNIKSS-IVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI 259

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N +C  G+      +   +      P+  T+ S I  LC E RI EA+ +  K       
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN LI+G C  G    A    +EM N     G+V   +  TYN +I  L  E  +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNR----GIVA--SVFTYNLLIHALFLEKRI 373

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+++  +M+++ + PDVVTY   I G+C   +  +A  LF EM+++ ++P V T++ +
Sbjct: 374 EEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSL 433

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K  +M +A    +  I  G+ P+   +N LIDG+C+   ID A +L   M++   
Sbjct: 434 IDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKV 493

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D V++NTL+  YC+ + VEEA  L  EM  +GIKP  ++YNTL  G  +   ++ AL+
Sbjct: 494 VPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALE 553

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +FDEM          TYN  I G  K G    A EL R ++      +  +Y  +I+ +
Sbjct: 554 VFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 211/419 (50%), Gaps = 15/419 (3%)

Query: 92  CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT---HSIL 148
           CI   +L   PSP P  SF+IL   L    H  T   +F  L+ A    ++ T     +L
Sbjct: 100 CITLCILYRLPSPKP--SFHILQPIL----HTTTPTVIFNELSLARNRLNVKTTLVFDLL 153

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +C+  +       L  +  +   P   T  SL+  L   ++I  A  ++ +      
Sbjct: 154 LSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNI 213

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +  + T+N +IN LCR G    A +    M      +GV  KPN VTYNT+I+G C  G 
Sbjct: 214 KSSIVTFNIMINILCREGKWKKAKDFIGHME----VYGV--KPNVVTYNTVINGYCLRGK 267

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            + A ++F  MKD+N+ PD  TY S I   C      EA  +  ++++ G+ P+ VT++ 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  C  G +DKA    + M+ RG+  + +TYN LI    L  +I+ A  +   M   G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+YN  IN YC+  + ++ALSL+ EM+ K I+PTV TY +L     + +++  A 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + F +  +  +  D   +N  IDG C +G +  A +L + + ++K   + V++N L+ G
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 209/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N++ G L K K       LF  +    + P+  T++ LI+ +CK+G++   F +
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+      P  +TF SL+ GLC    + EA  +  +  V+   PD FTY TL +G  +
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   ++ L EE      +          T + +++ LCKEG ++KA+E+  K  +  +
Sbjct: 335 CGNVDASITLSEEAVRKGVQI------LDYTCSILLNALCKEGNMEKAEEVLKKFLENGL 388

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P  V + +++ G+C   D N+A     +M   G++P+ VT++ ++ + C+   M++A +
Sbjct: 389 APVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEK 448

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            ++ M+ +GV PN  TYNTLIDGY  +   D   ++   ME  G   +V+SY  LIN  C
Sbjct: 449 CIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLC 508

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ ++ EA  +  +M+ +G+ P    YN L  G     +++ A + FDEM    +     
Sbjct: 509 KDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLV 568

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+GLCK G V+EA  L   I       ++++YN LI G
Sbjct: 569 TYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISG 611



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 195/438 (44%), Gaps = 76/438 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+S N+    L   K Y+  L LF  +  +GL PD + +   I    K+G +     +
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +     +C     V+                              P VF YN +I GLC+
Sbjct: 205 M-----TCMKRGGVS------------------------------PGVFVYNVVIGGLCK 229

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LF+EM +          PN +TYNT+IDG CK G +++A  +  +MK EN+
Sbjct: 230 EKRMKDAEKLFDEMLDRR------VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENV 283

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF------------------ 326
            P ++T+ S++ G C A    EA+R+  EM   G  PD  T+                  
Sbjct: 284 EPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASIT 343

Query: 327 -----------------SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                            S++++ LCK G M+KA  +L+  +  G+ P    +NT+++GYC
Sbjct: 344 LSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYC 403

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I+ A      ME+ G   + V+YN+L+  +C+ K++EEA     +M+ KG+ P V 
Sbjct: 404 QVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVE 463

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYNTL  G       +R  ++ +EM +  +  +  +Y   I+ LCK   +LEA  +   +
Sbjct: 464 TYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDM 523

Query: 490 RDSKYELNIVSYNCLIDG 507
                  N   YN LIDG
Sbjct: 524 VHRGVVPNAQIYNMLIDG 541



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 206/412 (50%), Gaps = 15/412 (3%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +++    P + +FN L   L + +  +    + + +   G  PD +T++ L +   K G 
Sbjct: 278 MKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGN 337

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     +    +R        T + L+  LC E  + +A  +  K       P    +NT
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           ++NG C+ G    A    E+M        V  +PN VTYN+++   C+   +++A++   
Sbjct: 398 IVNGYCQVGDINKAYTTIEKME------AVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIK 451

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           KM ++ + P+V TY ++I G+  +  ++   ++  EM  +G++P+V+++  +++ LCK+ 
Sbjct: 452 KMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDA 511

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
            + +A  +L  M+ RGV PN   YN LIDG C+  K+  A + F  M +   +  +V+YN
Sbjct: 512 NILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN 571

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            LIN  CK   V EA +L SE+  KG+   V+TYN+L  G      V++AL+L++ M+++
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS----YNCLI 505
            +     TY+  I G  K G V     L   I     ++N+V     YN LI
Sbjct: 632 GIKPTLNTYHRLIAGCGKEGLV-----LVEKIYQEMLQMNLVPDRVIYNALI 678



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 206/432 (47%), Gaps = 40/432 (9%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +IL   L K  + +    + K+    GL P     + ++N +C++G ++  +  + ++  
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               PN VT+ SL+K  C    + EA     K       P+V TYNTLI+G  R+     
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
              + EEM           KPN ++Y  +I+ LCK+  + +A+ +   M    + P+   
Sbjct: 481 CFQILEEMEKKG------LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQI 534

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G C A    +A R F EM+ + + P +VT++++++ LCK GK+ +A  L   + 
Sbjct: 535 YNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEIT 594

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC--------------------- 389
            +G++ +  TYN+LI GY     +  A +L+ +M+ +G                      
Sbjct: 595 RKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL 654

Query: 390 -------------MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
                        + D V YN LI+ Y ++ DV++A SL+S M ++GI+P  +TYN L L
Sbjct: 655 VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLIL 714

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G F+  ++ +   L ++M+   +   T TY+  I G CK      A   +R + ++ +  
Sbjct: 715 GHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTP 774

Query: 497 NIVSYNCLIDGL 508
           ++   + LI GL
Sbjct: 775 SVSICDNLITGL 786



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 161/336 (47%), Gaps = 7/336 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     ++  +D    + + +   GL P++ ++  LINC CK   +    V+
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG ++     PNA  +  LI G C   ++ +A   F +       P + TYN LINGLC+
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A NL  E+      F V+      TYN++I G    G V KA EL+  MK   I
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVI------TYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P + TY  +I G C        ++++ EM+   + PD V ++ ++    ++G + KA  
Sbjct: 634 KPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  +G+ P+  TYN LI G+    ++   + L   M+  G +    +Y+ LI  +C
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           K KD + A   Y EM   G  P+V   + L  GL E
Sbjct: 753 KLKDFDGAYVWYREMFENGFTPSVSICDNLITGLRE 788



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 188/398 (47%), Gaps = 13/398 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GDIN     +A    + M  +   P  V+ +N L     + K+ +      K++   G+ 
Sbjct: 406 GDIN-----KAYTTIEKMEAVGLRPNHVT-YNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T++ LI+ + +       F +L  + +    PN +++  LI  LC ++ I+EA  +
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
                     P+   YN LI+G C  G    A   F+EM        +V  P  VTYN +
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE----IV--PTLVTYNIL 573

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+GLCK+G V +A+ L  ++  + ++ DV+TY S+I G+  A +  +A  L+  M   G+
Sbjct: 574 INGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P + T+  ++    K G +    ++ + M+   + P+   YN LI  Y     +  A  
Sbjct: 634 KPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L  +ME+ G   D ++YN LI  + K   + +  +L ++M  +G+ P   TY+ L +G  
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           ++   + A   + EM  N         +N I GL + G
Sbjct: 753 KLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEG 790


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 216/420 (51%), Gaps = 6/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           + + +F  M+      P V + + L   L K +H+   + LF  + S G+ PD+Y ++ +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C++  +S    ++  +  +    N V +  LI GLC + ++ EA  +         
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TY TL+ GLC+     + L + +EM        +   P+    +++++GL K G 
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A  L  ++ D  ++P++  Y ++I   C    ++EA+ LF  M   G++P+ VT+S+
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  C+ GK+D A   L  M+  G+  + Y YN+LI+G+C    I  A      M +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               VV+Y +L+  YC    + +AL LY EM  KGI P++ T+ TL  GLF    +  A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KLF+EM   +V  +  TYN  I+G C+ G + +A E  + + +     +  SY  LI GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  +N+L   L K +     + + K L    L PD+ T+  L+   CK+     G  ++ 
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L   F+P+    +SL++GL    +I EA  L  +   F   P++F YN LI+ LC+  
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  LF+ M    G+ G+  +PN VTY+ +ID  C+ G +D A     +M D  +  
Sbjct: 382 KFHEAELLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V  Y S+I G C   D + A+    EM+++ ++P VVT++ +M   C  GK++KA RL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G+ P+ YT+ TL+ G      I  A KLF  M       + V+YN +I  YC+ 
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D+ +A     EM  KGI P   +Y  L  GL    Q   A    D + + +   +   Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              + G C+ G + EAL + + +     +L++V Y  LIDG
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 211/428 (49%), Gaps = 14/428 (3%)

Query: 81  DINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           +I L   +E LC     LR  PS   VSS   L   L K    +  L+L KR+   G+ P
Sbjct: 314 EIGLEMMDEMLC-----LRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSP 365

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           +++ ++ LI+  CK  +     ++  R+ +    PN VT++ LI   C   ++  A +  
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +      +  V+ YN+LING C+ G    A     EM N   E      P  VTY +++
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYTSLM 479

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            G C +G ++KA  L+ +M  + I P + T+T+++ G   A    +A +LF EM +  V+
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+ VT++V+++  C+ G M KA   L+ M  +G+ P+TY+Y  LI G CLT +   A+  
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              +    C  + + Y  L++ +C+   +EEALS+  EM+ +G+   +V Y  L  G  +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
               +    L  EM    +  D   Y + ID   K+G   EA  ++  + +     N V+
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719

Query: 501 YNCLIDGL 508
           Y  +I+GL
Sbjct: 720 YTAVINGL 727



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 223/491 (45%), Gaps = 79/491 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +FD M ++   P  V+ ++IL     +    DT LS    +   GL   +Y ++ 
Sbjct: 384 HEAELLFDRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  CK G +S     +  ++     P  VT+TSL+ G C++ +I +A  L+ +     
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P ++T+ TL++GL R G    A+ LF EMA  N       KPN VTYN +I+G C+EG
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEG 556

Query: 268 FVDKAKELFLKMKDENINPDV-----------------------------------VTYT 292
            + KA E   +M ++ I PD                                    + YT
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616

Query: 293 SVIRGFCYANDWNEA-------------------------------KRLFI----EMMDQ 317
            ++ GFC      EA                               ++LF     EM D+
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G++PD V ++ ++D   K G   +A  + +LMI  G  PN  TY  +I+G C    ++ A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNK-DVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             L   M+    + + V+Y   ++   K + D+++A+ L++ +L KG+     TYN L  
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIR 795

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G     ++E A +L   M  + V+ D  TY   I+ LC+   V +A+EL+ ++ +     
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 497 NIVSYNCLIDG 507
           + V+YN LI G
Sbjct: 856 DRVAYNTLIHG 866



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 33/392 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L +       + LF  +    + P+  T++++I  +C+ G +S  F  
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+  ++  LI GLC   +  EA           CE +   Y  L++G CR
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTVT 255
            G    AL++ +EM     +  +VC                             KP+ V 
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y ++ID   K G   +A  ++  M +E   P+ VTYT+VI G C A   NEA+ L  +M 
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL--MIWRGVNPNTYTYNTLIDGYCLTDK 373
                P+ VT+   +D L K G++D   + +EL   I +G+  NT TYN LI G+C   +
Sbjct: 745 PVSSVPNQVTYGCFLDILTK-GEVD-MQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           I+ A +L   M  +G   D ++Y T+IN  C+  DV++A+ L++ M  KGI+P  V YNT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           L  G     ++ +A +L +EM R  +  +  T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           + +L     K+K       L K ++  GL PD   ++ +I+   K G     F +   ++
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN VT+T++I GLC    + EA  L +K +  +  P+  TY   ++ L +    +
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769

Query: 230 V-ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L   +  G          NT TYN +I G C++G +++A EL  +M  + ++PD 
Sbjct: 770 QKAVELHNAILKG-------LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TYT++I   C  ND  +A  L+  M ++G++PD V ++ ++   C  G+M KA+ L   
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 349 MIWRGVNPNTYTYNT 363
           M+ +G+ PN  T  T
Sbjct: 883 MLRQGLIPNNKTSRT 897


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 190/342 (55%), Gaps = 6/342 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  +   GL  D  T++ LIN  C+ G +     VL  +       +AVT+T LI G C 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  +  K       P+V TY  L +GLC+ G    A  L  EM +   E     
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             N  TYN++I+GLCK G +++A    + M +  + PDV TYT++I   C + + + A  
Sbjct: 494 --NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM+D+G++P +VT++V+M+  C +G+++   RLLE M+ + ++PNT TYN+L+  YC
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           +   +    +++  M S   + +  +YN LI  +CK ++++EAL  +SEM+ KG + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           +YN L   L +  +   A +LF++MR++ + A+   YN +ID
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 205/399 (51%), Gaps = 9/399 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+NIL   L           LF  + S    PD+ T+ I+++ +C +  +     +L  +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N V +TS+I  LC E ++ +A  +     +     D   + T+++G CR G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A N F+EM             + VTY  +I+GLC+ G + +A+ +  +M+D+ ++ D 
Sbjct: 372 AAARNWFDEMQKRG------LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT +I G+C      EA  +  +M+ + V P+VVT++ + D LCK G +  A+ LL  
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+  N +TYN+LI+G C    ++ A +  + M+  G   DV +Y T+I   C++K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A SL  EML KGIKPT+VTYN L  G     +VE   +L + M   ++  +T TYN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   C    +    E+++ +   +   N  +YN LI G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 208/448 (46%), Gaps = 33/448 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +FD M     SPP V ++ I+          +T + L   + + GL  +   ++ 
Sbjct: 270 KDAHQLFDEM----ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   C  G+VS    V+  ++      +A  FT+++ G C +  +  A   F + +   
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK-------- 250
              D  TY  LINGLCR G    A  + +EM +   +   V         CK        
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       PN VTY  + DGLCK+G V  A EL  +M  + +  ++ TY S+I G 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A +  +A R  I+M + G++PDV T++ I+  LC++ ++D+A  LL+ M+ +G+ P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN L++G+C++ +++  ++L   M       +  +YN+L+  YC  K+++    +Y  
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           MLS+ + P   TYN L  G  +   ++ AL    EM          +YN  I  L K   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLID 506
             EA  LF  +R  +       YN  ID
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYID 713



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 155/314 (49%), Gaps = 13/314 (4%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA  LF +      E +  +YN L+  LC  G    A  LF+EMA+          P+ V
Sbjct: 240 EAVQLFQE----LPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY  ++ G C    ++ A +L  +M    +  + V YTSVI   C     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +  GV  D   F+ +M   C+ G +  A    + M  RG+  +  TY  LI+G C   ++
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A ++   ME  G   D V+Y  LI+ YCK   + EA  ++++M+ K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +   V  A +L  EM    +  + +TYN+ I+GLCK+G + +A+     + ++  
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 495 ELNIVSYNCLIDGL 508
           + ++ +Y  +I  L
Sbjct: 527 KPDVYTYTTIIGAL 540


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 189/342 (55%), Gaps = 6/342 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  +   GL  D  T++ LIN  C+ G +     VL  +       +AVT+T LI G C 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  +  K       P+V TY  L +GLC+ G    A  L  EM +   E     
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             N  TYN++I+GLCK G +++A    + M +  + PDV TYT++I   C + + + A  
Sbjct: 494 --NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM+D+G++P +VT++V+M+  C +G+++   RLLE M+ + ++PNT TYN+L+  YC
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           +   +    +++  M S   + +  +YN LI  +CK ++++EAL  +SEM+ KG + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           +YN L   L +  +   A +LF++MR+  + A+   YN +ID
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 208/399 (52%), Gaps = 9/399 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+NIL   L           LF  + S    PD+ T+ I+++ +C +  +     +L  +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N V +TS+I  LC E ++ +A  +     +     D   + T+++G CR G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A N F+EM     + G+    + VTY  +I+GLC+ G + +A+ +  +M+D+ ++ D 
Sbjct: 372 AAARNWFDEMQ----KRGLAA--DGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT +I G+C      EA  +  +M+ + V P+VVT++ + D LCK G +  A+ LL  
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+  N +TYN+LI+G C    ++ A +  + M+  G   DV +Y T+I   C++K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A SL  EML KGIKPT+VTYN L  G     +VE   +L + M   ++  +T TYN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   C    +    E+++ +   +   N  +YN LI G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 208/447 (46%), Gaps = 33/447 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD M     SPP V ++ I+          +T + L   + + GL  +   ++ +
Sbjct: 271 DAHQLFDEM----ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C  G+VS    V+  ++      +A  FT+++ G C +  +  A   F + +    
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK--------- 250
             D  TY  LINGLCR G    A  + +EM +   +   V         CK         
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTY  + DGLCK+G V  A EL  +M  + +  ++ TY S+I G C
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A +  +A R  I+M + G++PDV T++ I+  LC++ ++D+A  LL+ M+ +G+ P   
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TYN L++G+C++ +++  ++L   M       +  +YN+L+  YC  K+++    +Y  M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           LS+ + P   TYN L  G  +   ++ AL    EM          +YN  I  L K    
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 480 LEALELFRAIRDSKYELNIVSYNCLID 506
            EA  LF  +R  +       YN  ID
Sbjct: 687 TEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 9/300 (3%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           E +  +YN L+  LC  G    A  LF+EMA+          P+ VTY  ++ G C    
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVVTYGIMVHGYCTLSE 300

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++ A +L  +M    +  + V YTSVI   C     ++A R+  +M+  GV  D   F+ 
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M   C+ G +  A    + M  RG+  +  TY  LI+G C   ++  A ++   ME  G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D V+Y  LI+ YCK   + EA  ++++M+ K + P VVTY  L  GL +   V  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L  EM    +  + +TYN+ I+GLCK+G + +A+     + ++  + ++ +Y  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  224 bits (570), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 199/375 (53%), Gaps = 7/375 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  IF  MLR    P  VS F+ L    ++N+H D  L  F+ +   GL PD   +++
Sbjct: 240 SEAKEIFGEMLRQGVVPDLVS-FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +C+ G +     +   +L      + + + +++ GLC E  + +A  LF +     
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD +T+ TLI+G C+ G+   AL+LF  M   N       KP+ V YNT+IDG CK G
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN------IKPDIVAYNTLIDGFCKVG 412

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++KA EL+  M    I P+ +TY  +I  +C     +EA RL+  M+++G++P +VT +
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 472

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C++G   KA   L  MI +GV P+  +YNTLI+G+   D +D A      ME  
Sbjct: 473 TVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE 532

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+++YN ++N +C+   ++EA  +  +M+ KGI P   TY  L  G      +  A
Sbjct: 533 GLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEA 592

Query: 448 LKLFDEMRRNHVAAD 462
            +  DEM +   A D
Sbjct: 593 FRFHDEMLQRGFAPD 607



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 204/403 (50%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L K   Y     +   + + GL PD  T++ L+   C+    S    +
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEI 245

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G +LR    P+ V+F+SLI        + +A   F   + F   PD   Y  L++G CR
Sbjct: 246 FGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 305

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+ + AL + +EM          C  + + YNTI++GLCKE  +  A +LF +M +   
Sbjct: 306 NGNMLEALKIRDEMLEQG------CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+T++I G C   +  +A  LF  M  + ++PD+V ++ ++D  CK G+M+KAS 
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + MI R + PN  TY  LI+ YC    +  A +L+  M   G    +V+ NT+I  YC
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ D  +A      M++KG+ P  ++YNTL  G      +++A    ++M +  +  D  
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDII 539

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  ++G C+ G + EA  + R + +     +  +Y  LI+G
Sbjct: 540 TYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 202/401 (50%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NI+   L K+  +D V S    +   G++ D+ T++ LI  +C+ G +   F ++ 
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+  T+ ++I GLC + R   A  +  +       PD  TYNTL+   CR  
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  +F EM       GVV  P+ V+++++I    +   +D+A   F  MK   + P
Sbjct: 238 NFSEAKEIFGEMLRQ----GVV--PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVP 291

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YT ++ G+C   +  EA ++  EM++QG   DV+ ++ I++ LCK   +  A +L 
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M+ RG  P+ YT+ TLI G+C    +  A  LF +M       D+V+YNTLI+ +CK 
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKV 411

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++E+A  L+  M+S+ I P  +TY  L      +  V  A +L+D M    +     T 
Sbjct: 412 GEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTC 471

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  I G C+SG   +A E    +       + +SYN LI+G
Sbjct: 472 NTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLING 512



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 213/411 (51%), Gaps = 6/411 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +LR       +++ N L G L K    +    + + +  +G+  ++YT +I++N  CK G
Sbjct: 73  ILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDG 132

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +       L  +  +    + VT+ +LI   C E  + EA  +         +P +FTYN
Sbjct: 133 KFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYN 192

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            +INGLC+ G    A  +  EM N      +   P+T TYNT++   C+     +AKE+F
Sbjct: 193 AIINGLCKKGRYARAKGILIEMLN------IGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M  + + PD+V+++S+I  F      ++A   F +M   G+ PD V ++V+M   C+N
Sbjct: 247 GEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 306

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G M +A ++ + M+ +G   +   YNT+++G C    +  A KLF  M   G + D  ++
Sbjct: 307 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 366

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            TLI+ +C++ ++ +ALSL+  M  + IKP +V YNTL  G  ++ ++E+A +L+D M  
Sbjct: 367 TTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +  +  TY   I+  C  G V EA  L+  + +   +  +V+ N +I G
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 198/398 (49%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L     + +        F+ L S G    I   + L+    K+  V   + V   ++
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           RS    N  T   ++  LC + +  +  +  ++        D+ TYNTLI   CR G   
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +   MA+         KP+  TYN II+GLCK+G   +AK + ++M +  ++PD  
Sbjct: 171 EAFEIMNSMADKG------LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY +++   C  ++++EAK +F EM+ QGV PD+V+FS ++    +N  +D+A      M
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM 284

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G+ P+   Y  L+ GYC    +  A K+   M   GC+ DV++YNT++N  CK K +
Sbjct: 285 KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 344

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            +A  L+ EM+ +G  P   T+ TL  G  +   + +AL LF  M + ++  D   YN  
Sbjct: 345 TDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTL 404

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           IDG CK G + +A EL+  +   K   N ++Y  LI+ 
Sbjct: 405 IDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 442



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 7/306 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL I D ML        V ++N +   L K K       LF  +   G  PD YT + L
Sbjct: 311 EALKIRDEMLE-QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C+ G ++    + G + +    P+ V + +LI G C    + +A+ L+        
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY  LIN  C  GH   A  L++ M     E G+  KP  VT NT+I G C+ G 
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMI----EKGI--KPTLVTCNTVIKGYCRSGD 483

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             KA E   +M  + + PD ++Y ++I GF   ++ ++A     +M  +G+ PD++T++V
Sbjct: 484 SSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNV 543

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M+  C+ G+M +A  +L  MI +G+NP+  TY  LI+G+   D ++ A +    M   G
Sbjct: 544 VMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603

Query: 389 CMHDVV 394
              D V
Sbjct: 604 FAPDDV 609



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 138/252 (54%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N+++ GL K  +V+ A E+  ++    I  +V T   ++   C    +++ K    EM  
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G+  D+VT++ ++   C+ G +++A  ++  M  +G+ P+ +TYN +I+G C   +   
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A+ + + M + G   D  +YNTL+   C+  +  EA  ++ EML +G+ P +V++++L  
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
                  +++AL  F +M++  +  D   Y   + G C++G +LEAL++   + +    L
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326

Query: 497 NIVSYNCLIDGL 508
           ++++YN +++GL
Sbjct: 327 DVIAYNTILNGL 338



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 106/223 (47%)

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N   + + +  +IR +  A    E    F  +  +G    +   + ++  L K   ++ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +   ++  G+  N YT N +++  C   K D  +     ME NG   D+V+YNTLI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YC+   +EEA  + + M  KG+KP++ TYN +  GL +  +  RA  +  EM    ++ D
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           T TYN  +   C+     EA E+F  +       ++VS++ LI
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI 265



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N   ++ LI  Y    K+    + F  + S G +  + + N+L+    K   VE A  ++
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            E++  GI+  V T N +   L +  + +       EM  N + AD  TYN  I   C+ 
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G + EA E+  ++ D   + ++ +YN +I+GL
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGL 198



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 1/133 (0%)

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +++    L  SM  N C  + + ++ LI  Y + + + E    +  + SKG   ++   N
Sbjct: 29  RVEVVEALVSSMCGN-CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACN 87

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +L  GL +I  VE A ++  E+ R+ +  + YT N  ++ LCK G   +       +  +
Sbjct: 88  SLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN 147

Query: 493 KYELNIVSYNCLI 505
               ++V+YN LI
Sbjct: 148 GIYADMVTYNTLI 160


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 208/387 (53%), Gaps = 11/387 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N L     K       L+LF  +  +G+   + +H+I++   C  G++S  + V
Sbjct: 135 PDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEV 193

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             + +   F+PN +++T +I GLC   ++ +A  LF +    A  PDV TY  LI+GL +
Sbjct: 194 F-KDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK 252

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDEN 283
                 A +LFEE A   G     C P  VTYNT+IDGLCK G ++ A  L+  M ++ +
Sbjct: 253 QRRVKEAYDLFEE-ARAKG-----CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPH 306

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD+ TY+++I G   +N   +A  L+ EM+D G  PDVVT++ ++D LCK+G  DKA 
Sbjct: 307 LKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAM 366

Query: 344 RLLELM-IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +   M +    +PN  TY  LID +C  D++  A KL   ME    + D V++ T+I  
Sbjct: 367 EIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQK 426

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK   ++EA  L+ E + K  KP  V +NT+  G  +I +++ A KL D M  +  A  
Sbjct: 427 LCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAI 489
             TY   + G C++G   +AL ++  +
Sbjct: 486 LATYTALVTGFCRTGRYSDALIMYHEM 512



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/324 (35%), Positives = 178/324 (54%), Gaps = 9/324 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+ I+   L K++  D  ++LFK++    ++PD+ T+  LI+   K  RV   + +
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLC 223
                     P  VT+ ++I GLC   RI  A  L+    R    +PD+FTY+ LINGL 
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            +     A  L+EEM +        C P+ VTYNT++DGLCK G  DKA E+F KM   N
Sbjct: 323 LSNRGEKAYELYEEMLDTG------CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN 376

Query: 284 I-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           + +P+V+TYT +I  FC  +   +A +L  EM  + + PD VTF+ ++ +LCK  ++D+A
Sbjct: 377 VCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEA 436

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L E  I +   P++  +NT++ GYC   +ID A+KL   M  +GC   + +Y  L+  
Sbjct: 437 HELFE-SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTG 495

Query: 403 YCKNKDVEEALSLYSEMLSKGIKP 426
           +C+     +AL +Y EM+  G  P
Sbjct: 496 FCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 189/349 (54%), Gaps = 10/349 (2%)

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +T + L++ + K  RV    +     +++ F P+ V++ +L+ G      + +A ALF +
Sbjct: 103 FTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGE 162

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +       + ++N ++ GLC  G   +A  +F++M+        +  PN ++Y  +IDG
Sbjct: 163 MKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSG-------IFSPNLISYTIMIDG 214

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK   VDKA  LF +M D+ I PDVVTY ++I G        EA  LF E   +G  P 
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 274

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           VVT++ ++D LCK G+++ A  L + M+    + P+ +TY+ LI+G  L+++ + A +L+
Sbjct: 275 VVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELY 334

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI-KPTVVTYNTLFLGLFE 440
             M   GC  DVV+YNTL++  CK+   ++A+ ++ +M    +  P V+TY  L     +
Sbjct: 335 EEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCK 394

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           + ++  A+KL  EM    +  D  T+   I  LCK   + EA ELF +I
Sbjct: 395 VDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 140/259 (54%), Gaps = 5/259 (1%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N  T N ++    K   V+ A   F         PD V+Y +++ GF  A D  +A  LF
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV-NPNTYTYNTLIDGYCL 370
            EM D G+   + + ++++  LC  GK+  A  + + M   G+ +PN  +Y  +IDG C 
Sbjct: 161 GEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCK 217

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           + K+D A  LF  M       DVV+Y  LI+   K + V+EA  L+ E  +KG  PTVVT
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277

Query: 431 YNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           YNT+  GL +  ++E AL L+D+M R  H+  D +TY+  I+GL  S    +A EL+  +
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337

Query: 490 RDSKYELNIVSYNCLIDGL 508
            D+    ++V+YN L+DGL
Sbjct: 338 LDTGCSPDVVTYNTLLDGL 356



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 42/291 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K +       LF+   + G  P + T++ +I+  CK GR+ +   +
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297

Query: 165 LGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
              ++R     P+  T+++LI GL   +R  +A  L+ +     C PDV TYNTL++GLC
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID---------------------- 261
           ++G    A+ +F +M  GN     VC PN +TY  +ID                      
Sbjct: 358 KSGCEDKAMEIFRKMGVGN-----VCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRS 412

Query: 262 -------------GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
                         LCKE  +D+A ELF  +  +   PD V + +++ G+C     ++AK
Sbjct: 413 LLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAK 471

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
           +L   M+D G  P + T++ ++   C+ G+   A  +   MI  G  P  +
Sbjct: 472 KLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERH 522



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 8/234 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL ++D M+R     P + +++ L   L  +   +    L++ +   G  PD+ T++ L+
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLL 353

Query: 150 NCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  CK G       +  ++ + +   PN +T+T LI   C   R+ +A  L  +    + 
Sbjct: 354 DGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+ T+I  LC+      A  LFE +       G  CKP++V +NT++ G CK   
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESI-------GKTCKPDSVLFNTMLAGYCKITR 466

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           +D AK+L  +M D    P + TYT+++ GFC    +++A  ++ EM++ G  P+
Sbjct: 467 IDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 1/151 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ IF  M   +   P V ++ +L     K       + L K +    L PD  T + 
Sbjct: 363 DKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTT 422

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   CK  R+     +   I ++C  P++V F +++ G C  +RI +A  L  +     
Sbjct: 423 VIQKLCKESRIDEAHELFESIGKTC-KPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSG 481

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           C P + TY  L+ G CRTG    AL ++ EM
Sbjct: 482 CAPTLATYTALVTGFCRTGRYSDALIMYHEM 512



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           H+  + N L++ Y K + VE+A   +   +    +P  V+YNTL  G F+   V++AL L
Sbjct: 100 HNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL 159

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F EM+ + +A    ++N  + GLC  G +  A E+F+ +    +  N++SY  +IDGL
Sbjct: 160 FGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGL 215


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 210/422 (49%), Gaps = 12/422 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M +     P   S++IL   L +    +    L  ++   G  P   T+++L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKHRV 205
           I   C  G +   F +   ++     PN  T+T LI GLC + +I EA  +     K R+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F   P V TYN LING C+ G  + A  L   M          CKPN  T+N +++GLC+
Sbjct: 368 F---PSVITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCR 418

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G   KA  L  +M D  ++PD+V+Y  +I G C     N A +L   M    ++PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ I++  CK GK D AS  L LM+ +G++ +  T  TLIDG C   K   A  +  ++ 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
               +    S N +++   K   V+E L++  ++   G+ P+VVTY TL  GL     + 
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + ++ + M+ +    + Y Y   I+GLC+ G V EA +L  A++DS    N V+Y  ++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 506 DG 507
            G
Sbjct: 659 KG 660



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ +L   L      D   +LF  +   G  P+++T+++LI+  C+ G++     V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++    P+ +T+ +LI G C + R++ A  L T     AC+P+V T+N L+ GLCR
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++L + M + NG       P+ V+YN +IDGLC+EG ++ A +L   M   +I
Sbjct: 419 VGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+T++I  FC     + A      M+ +G+  D VT + ++D +CK GK   A  
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE ++   +    ++ N ++D      K+     +   +   G +  VV+Y TL++   
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++ D+  +  +   M   G  P V  Y  +  GL +  +VE A KL   M+ + V+ +  
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY   + G   +G +  ALE  RA+ +  YELN   Y+ L+ G
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 196/401 (48%), Gaps = 9/401 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  +   L KN + +       ++   G   D +  + L+  FC+   +     V   + 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257

Query: 170 R--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +  +C  PN+V+++ LI GLC   R+ EA  L  +     C+P   TY  LI  LC  G 
Sbjct: 258 KEVTC-APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A NLF+EM          CKPN  TY  +IDGLC++G +++A  +  KM  + I P 
Sbjct: 317 IDKAFNLFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V+TY ++I G+C       A  L   M  +  +P+V TF+ +M+ LC+ GK  KA  LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M+  G++P+  +YN LIDG C    ++ A KL  SM       D +++  +IN +CK  
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
             + A +    ML KGI    VT  TL  G+ ++ +   AL + + + +  +    ++ N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +D L K   V E L +   I       ++V+Y  L+DGL
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 5/348 (1%)

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            +V   R+    F    + + +++  LC       A    +K        D     +L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G CR  +   AL +F+ M+       V C PN+V+Y+ +I GLC+ G +++A  L  +M 
Sbjct: 239 GFCRGLNLRDALKVFDVMSK-----EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           ++   P   TYT +I+  C     ++A  LF EM+ +G +P+V T++V++D LC++GK++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A+ +   M+   + P+  TYN LI+GYC   ++  A +L   ME   C  +V ++N L+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              C+     +A+ L   ML  G+ P +V+YN L  GL     +  A KL   M    + 
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D  T+   I+  CK G    A      +      L+ V+   LIDG+
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 35/361 (9%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +A+ +   ML    SP  VS +N+L   L +  H +T   L   +N   + PD  T +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVS-YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKH 203
            +IN FCK G+       LG +LR   + + VT T+LI G+C   +  +A  +     K 
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
           R+      +     +++  C+    +  L    ++       G+V  P+ VTY T++DGL
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL-------GLV--PSVVTYTTLVDGL 591

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + G +  +  +   MK     P+V  YT +I G C      EA++L   M D GV P+ 
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK-IDHARKLFV 382
           VT++V++     NGK+D+A   +  M+ RG   N   Y++L+ G+ L+ K ID++ +  V
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711

Query: 383 S-------------------MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           S                    +  GC+  +  +  L+   CK    +E+  L   +L +G
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERG 769

Query: 424 I 424
           +
Sbjct: 770 V 770


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 215/410 (52%), Gaps = 7/410 (1%)

Query: 97  MLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           M R   +PPP + S+N++   L ++      L +F  +   G+ P+  T++ +I+   K 
Sbjct: 5   MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKG 64

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G +  GF +  ++L     PN VT+  L+ GLC   R+ E   L  +    +  PD FTY
Sbjct: 65  GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 124

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           + L +GL RTG +   L+LF E        G        T + +++GLCK+G V KA+++
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLG------AYTCSILLNGLCKDGKVAKAEQV 178

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
              +    + P  V Y ++I G+C   D   A  +F +M  + ++PD +T++ +++ LCK
Sbjct: 179 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
              + KA  L+  M   GV+P+  T+NTLID Y    +++    +   M+  G   DV+S
Sbjct: 239 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           + +++  +CKN  + EA+++  +M+ K + P    YN++     E    E+A  L ++M+
Sbjct: 299 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + V+A   TYN  + GLC+S  + EA EL   +R+     ++VSYN +I
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 408



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 206/409 (50%), Gaps = 7/409 (1%)

Query: 100 MHPSPPP-VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           +H  P P + ++N+L   L +    D    L   + S  +FPD +T+SIL +   + G  
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +    L+      A T + L+ GLC + ++ +A  +          P    YNTL
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 197

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ING C+      A  +FE+M + +       +P+ +TYN +I+GLCK   V KA++L ++
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M+   ++P V T+ ++I  +  A    +   +  +M  +G++ DV++F  ++   CKNGK
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + +A  +L+ MI++ V PN   YN++ID Y  +   + A  L   M+++G    +V+YN 
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           L+   C++  ++EA  L   + ++G++P VV+YNT+          ++AL+L  EM +  
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +     TY+  +  L  +G V +   L++ +     E +   Y  ++D 
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 171/333 (51%), Gaps = 6/333 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+A ++  +I GL    +  +A  +F +       P+  TYNT+I+G  + G       L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            ++M +         KPN VTYN ++ GLC+ G +D+ + L  +M   ++ PD  TY+ +
Sbjct: 74  RDQMLHDGP------KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
             G     +      LF E + +GV     T S++++ LCK+GK+ KA ++LE+++  G+
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P T  YNTLI+GYC    +  A  +F  M+S     D ++YN LIN  CK + V +A  
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 247

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  EM   G+ P+V T+NTL        Q+E+   +  +M++  + +D  ++ + +   C
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K+G + EA+ +   +       N   YN +ID 
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 340



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 185/425 (43%), Gaps = 43/425 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E   + D M   H   P   +++ILF  L +     T+LSLF      G+    YT SI
Sbjct: 103 DETRVLMDEMAS-HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 161

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  CK G+V+    VL  ++ +   P  V + +LI G C    +  A  +F + +   
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  TYN LINGLC+      A +L  EM            P+  T+NT+ID     G
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG------VDPSVETFNTLIDAYGTAG 275

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCY--------------------------- 300
            ++K   +   M+ + I  DV+++ SV++ FC                            
Sbjct: 276 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 335

Query: 301 --------ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                   + D  +A  L  +M + GV   +VT+++++  LC++ ++D+A  L+  +  +
Sbjct: 336 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 395

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  +YNT+I   C     D A +L   M   G    + +Y+TL++       V + 
Sbjct: 396 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 455

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA-ADTYTYNNFID 471
             LY +ML K ++P+   Y  +           +   L  EM    +A  DT   N+ +D
Sbjct: 456 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRSNHELD 515

Query: 472 GLCKS 476
            +  S
Sbjct: 516 RIIAS 520


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  I  ++ R    P   +  +++ G   +N + D   ++F R+   G  P+  T+S 
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILG-HCRNHNLDLAFAMFDRMVKDGCDPNSVTYST 277

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  GR+     +L  +++    P   T+T  +  LC      EA  L  K +   
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P++ T+  LI+GL R G   +A+ L+ +M       G+V  P TVTYN +I+ LC EG
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV--PTTVTYNALINQLCVEG 391

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A  +F  M      P   TY  +I+ FC   D  +A  +F +M+  G  P+V+T++
Sbjct: 392 RFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYN 451

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK G ++ A RLLE+M   G+ P+ +TY  LI G+    K++HA  LF  M  +
Sbjct: 452 TLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V+Y  +I+ Y     V++AL+L+ +M+  G  P+  TYN +  G  + + +  A
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                +M +  +  +  TY +FIDGLC++G    A ++F  +    Y  N+ +Y+ LI G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG 631

Query: 508 L 508
           L
Sbjct: 632 L 632



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 11/422 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +FD M++    P  V+ ++ L   L      +  + + + +   G+ P +YT++I +
Sbjct: 256 AFAMFDRMVKDGCDPNSVT-YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C  G  S    +LG++ +    PN  TFT+LI GL  + +   A  L+ K       
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P   TYN LIN LC  G    A  +F+ M + +G       P+T TYN II   C  G +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLS-HGSL-----PSTQTYNEIIKCFCLMGDI 428

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            KA  +F KM     +P+V+TY ++I G+C   + N A RL   M   G++PD  T++ +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    + GK++ A+ L   M+  G++PN  TY  +IDGY    K+D A  LF  M  +G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           +    +YN +I+ + K   + EA +   +M+ +G+ P V+TY +   GL    +   A K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKY--ELNIVSYNCLID 506
           +F EM + +   + YTY++ I GLC+ G   +A E++  + R + Y  E N+ +Y  L+ 
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 507 GL 508
           GL
Sbjct: 668 GL 669



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 199/406 (49%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L     ++T  ++FK + S G  P   T++ +I CFC MG +    V+
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L++  +PN +T+ +LI G C +  +  A  L    +    +PD +TY  LI+G  R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +LF  M     E G+   PN VTY  IIDG      VD A  LF KM +   
Sbjct: 495 GGKLEHATSLFYGMM----EHGI--SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TY  +I GF   N  +EA+    +M+ QG+ P+V+T++  +D LC+NG+   A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR--KLFVSMESNGCMHDVVSYNTLINW 402
           +   M  R   PN YTY++LI G C   + + A    L   +   GC  +V +Y TL+  
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C      EA  L   M  KG++P+   Y  L +G  +  +VE AL +F  M        
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              Y   I  LCK  F+ EA  +F+ + +  +  + V++  L+DGL
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 184/341 (53%), Gaps = 6/341 (1%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++L S   P+ +TF ++I  LC + R+ EA  + +    +   P+ FTY +LI G CR  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +  +A  +F+ M          C PN+VTY+T+I+GLC EG +++A ++  +M  + I P
Sbjct: 252 NLDLAFAMFDRMVKDG------CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V TYT  +   C A   +EA  L  +M  +G  P++ TF+ ++  L ++GK + A  L 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+  G+ P T TYN LI+  C+  + + A  +F  M S+G +    +YN +I  +C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D+++A+ ++ +ML  G  P V+TYNTL  G  +   +  A++L + M+ N +  D +TY
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              I G  + G +  A  LF  + +     N V+Y  +IDG
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 198/406 (48%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L+++  ++  + L+ ++ + GL P   T++ LIN  C  GR    F +
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+  T+  +IK  C    I +A  +F K       P+V TYNTLI G C+
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK 459

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+ L E M  GNG      KP+  TY  +I G  + G ++ A  LF  M +  I
Sbjct: 460 QGNLNNAMRLLEIM-KGNG-----LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+ VTYT++I G+      ++A  LF +M++ G  P   T++V++    K   + +A  
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
               M+ +G+ PN  TY + IDG C   +   A K+F  ME      ++ +Y++LI   C
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 405 KNKDVEEA--LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +    E+A   +L + +   G +P V TY TL  GL    +   A +L   M++  +   
Sbjct: 634 QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              Y   + G CK+  V  AL +F ++    ++L++  Y  LI  L
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 192/389 (49%), Gaps = 14/389 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GDI      +A+ IFD ML+   S P V ++N L     K  + +  + L + +   GL 
Sbjct: 426 GDIQ-----KAMVIFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD +T++ LI+ F + G++ H   +   ++    +PN VT+T++I G    +++ +A AL
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F K       P   TYN +I+G  +T     A N   +M       G++  PN +TY + 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ----GLL--PNVITYTSF 593

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK--RLFIEMMDQ 317
           IDGLC+ G    A ++F +M+  N  P++ TY+S+I G C      +A+   L   +   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G +P+V T++ ++  LC  G+  +A +L+  M  +G+ P+   Y  L+ G C   K++ A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             +F SM++ G    +  Y  LI   CK   +EEA  ++  ML K      V +  L  G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTY 466
           L +  + +  LKL   M   +   +  TY
Sbjct: 774 LLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 112/202 (55%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ ++I+M++ G++P ++TF+ +++ LCK G++ +A  ++  +      PN +TY +LI 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    +D A  +F  M  +GC  + V+Y+TLIN  C    +EEA+ +  EM+ KGI+P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           TV TY    + L +      A++L  +M++     +  T+   I GL + G    A+ L+
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +         V+YN LI+ L
Sbjct: 366 HKMLADGLVPTTVTYNALINQL 387



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 41/321 (12%)

Query: 223 CRTGHTIVALNLFEEMANGNGEFG-VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           CR    +  +  F    N   +FG  +C     ++ T++  L K   VD A+++++KM +
Sbjct: 141 CRNEGEVKRVTQFLSEINSKYDFGYTLC-----SFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             I P ++T+ ++I   C      EAK +   +      P+  T++ ++   C+N  +D 
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR----------------------- 378
           A  + + M+  G +PN+ TY+TLI+G C   +++ A                        
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 379 ------------KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                       +L   M+  GC+ ++ ++  LI+   ++   E A+ LY +ML+ G+ P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           T VTYN L   L    + E A  +F  M  +     T TYN  I   C  G + +A+ +F
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             +  +    N+++YN LI G
Sbjct: 436 DKMLKAGSSPNVITYNTLIYG 456



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 40/289 (13%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G  NL   ++AL +F  M+    + P   ++N++    +K        +   ++   GL 
Sbjct: 526 GYFNLAKVDDALALFWKMVE-SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA- 198
           P++ T++  I+  C+ GR    F +   + +  + PN  T++SLI GLC E R  +A   
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644

Query: 199 -LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------------GE 244
            L  +   + CEP+V TY TL+ GLC  G    A  L   M                 GE
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704

Query: 245 FGVVCKPNTVT--------------------YNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               CK   V                     Y  +I  LCKE F+++A+ +F  M +++ 
Sbjct: 705 ----CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           N D V +T ++ G     + +   +L   M  +    +  T+ ++  EL
Sbjct: 761 NSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 95/184 (51%)

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           +F+ ++ +L K   +D A  +   M+  G+ P+  T+NT+I+  C   ++  A+ +   +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
                  +  +Y +LI  +C+N +++ A +++  M+  G  P  VTY+TL  GL    ++
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E A+ + +EM +  +    YTY   +  LC +G   EA+EL   ++      NI ++  L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 505 IDGL 508
           I GL
Sbjct: 349 ISGL 352



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 64/118 (54%)

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           + + S+ TL+    K   V+ A  +Y +ML+ GI+P+++T+NT+   L +  +V+ A  +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              + R     + +TY + I G C++  +  A  +F  +     + N V+Y+ LI+GL
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 219/424 (51%), Gaps = 15/424 (3%)

Query: 89  EALCIFDYM-LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M LR   + PP+    +   C  +   + + +   + L++ G   D    ++
Sbjct: 126 DALTVLDEMPLRGCAATPPMCHVILEAAC--RGGGFRSAVRALQVLHAKGCTLDSGNCNL 183

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  C+ G V  G  +L ++      P+ V++ +++KGLC   R  +   L  +     
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P+V T+NTLI  LCR G       LFE   E  +   E G  C P+   Y TIIDG+C
Sbjct: 244 CPPNVATFNTLIAYLCRNG-------LFEQVHEALSQMPEHG--CTPDLRMYATIIDGIC 294

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K+G  + A ++  +M    + P+VV Y +V++G C A  W EA+ L  EM  +    D V
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 354

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    +D A  L  +M
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            + GC  + +SY  ++   C+ +   +A  L S M+ +G  P  VT+NTL   + +   V
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLV 474

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+ +
Sbjct: 475 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 534

Query: 505 IDGL 508
              L
Sbjct: 535 ASAL 538



 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 212/401 (52%), Gaps = 12/401 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N++   + +    D  + L ++L S G  PDI +++ ++   C   R      ++  ++R
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241

Query: 171 SCFTPNAVTFTSLIKGLCAES---RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
               PN  TF +LI  LC      ++ EA +   +H    C PD+  Y T+I+G+C+ GH
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEH---GCTPDLRMYATIIDGICKDGH 298

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             VA ++   M +    +G+  KPN V YNT++ GLC     ++A++L  +M  E+   D
Sbjct: 299 HEVANDILSRMPS----YGL--KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 352

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VT+  ++  FC     +    L  +M++ G  PDV+T++ +++  CK G +D+A  LL+
Sbjct: 353 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 412

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G  PNT +Y  ++ G C  ++   A++L   M   GC+ + V++NTLIN+ CK  
Sbjct: 413 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 472

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            VE+A+ L  +ML  G  P +++Y+T+  GL +  + E AL+L + M    +  +T  Y+
Sbjct: 473 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 532

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    L + G   + +++F +I+D+    +   YN +I  L
Sbjct: 533 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 573



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 207/415 (49%), Gaps = 9/415 (2%)

Query: 97  MLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           +LR  PS    P + S+N +   L   K +D V  L   +   G  P++ T + LI   C
Sbjct: 200 LLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLC 259

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G        L ++     TP+   + ++I G+C +     A  + ++   +  +P+V 
Sbjct: 260 RNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVV 319

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            YNT++ GLC       A +L  EM      F   C  + VT+N ++D  C+ G VD+  
Sbjct: 320 CYNTVLKGLCSAERWEEAEDLLAEM------FQEDCPLDDVTFNILVDFFCQNGLVDRVI 373

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           EL  +M +    PDV+TYT+VI GFC     +EA  L   M   G +P+ +++++++  L
Sbjct: 374 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 433

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C+  +   A  L+  MI +G  PN  T+NTLI+  C    ++ A +L   M  NGC  D+
Sbjct: 434 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDL 493

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           +SY+T+I+   K    EEAL L + M++KGI P  + Y+++   L    + ++ +++FD 
Sbjct: 494 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDS 553

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++   V +D   YN  I  LCK      A++ F  +  +    N  +Y  LI GL
Sbjct: 554 IQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 608



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 196/393 (49%), Gaps = 12/393 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V++FN L   L +N  ++ V     ++   G  PD+  ++ +I+  CK G       
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 304

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L R+      PN V + +++KGLC+  R  EA  L  +     C  D  T+N L++  C
Sbjct: 305 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G     + L E+M     E G  C P+ +TY T+I+G CKEG VD+A  L   M    
Sbjct: 365 QNGLVDRVIELLEQML----EHG--CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+ ++YT V++G C A  W +A+ L   M+ QG  P+ VTF+ +++ +CK G +++A 
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+ M+  G +P+  +Y+T+IDG     K + A +L   M + G   + + Y+++ +  
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            +    ++ + ++  +    ++     YN +   L +  + +RA+  F  M  N    + 
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598

Query: 464 YTYNNFIDGLCKSGFVLEALELF------RAIR 490
            TY   I GL   G V EA +L       RA+R
Sbjct: 599 STYTILIRGLASEGLVREAQDLLSELCSRRAVR 631



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 183/379 (48%), Gaps = 11/379 (2%)

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           + L++AG    +  ++ +I  +C+ G+V+    +   +      PNA T+  +++ LCA 
Sbjct: 65  RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVC 249
             I +A  +  +  +  C       + ++   CR G    A+   + + A G       C
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG-------C 174

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             ++   N ++  +C++G VD+  EL  K+      PD+V+Y +V++G C A  W++ + 
Sbjct: 175 TLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEE 234

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L +EM+  G  P+V TF+ ++  LC+NG  ++    L  M   G  P+   Y T+IDG C
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGIC 294

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                + A  +   M S G   +VV YNT++   C  +  EEA  L +EM  +      V
Sbjct: 295 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 354

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           T+N L     +   V+R ++L ++M  +    D  TY   I+G CK G V EA+ L + +
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + N +SY  ++ GL
Sbjct: 415 SACGCKPNTISYTIVLKGL 433



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 22/298 (7%)

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           + LI  LC  G T  A    +   +  G          V YN +I G C+ G V  A+ L
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG---------VVAYNAMIAGYCRAGQVAAARRL 98

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
              +    + P+  TY  ++R  C      +A  +  EM  +G         VI++  C+
Sbjct: 99  AAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G    A R L+++  +G   ++   N ++   C    +D   +L   + S GC  D+VS
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL-----GLFEIHQVERALKL 450
           YN ++   C  K  ++   L  EM+  G  P V T+NTL       GLFE  QV  AL  
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFE--QVHEALS- 272

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +M  +    D   Y   IDG+CK G    A ++   +     + N+V YN ++ GL
Sbjct: 273 --QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 200/386 (51%), Gaps = 7/386 (1%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D    +F  +    + PD  ++ +++  +C+MGR+S     L  ++   +  +  T T +
Sbjct: 210 DYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLM 269

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I     +  +  A   F K       P++  +++LINGLC+ G    A  + EEM     
Sbjct: 270 ISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGW 329

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYAN 302
                 KPN  T+  +IDGLCK+G+ +KA  LFLK+ + +N  P+V TYT +I G+C   
Sbjct: 330 ------KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE 383

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
             N A+ L I M +QG+ P+  T++ ++D  CK G   +A  L++LM   G  PN +TYN
Sbjct: 384 KLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            +IDG C   +   A KL      +G   D V+Y  LI+ +C+  D ++AL+++S M   
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G++P + TYN L        +VE + KLF+E     +     TY + I G C+ G +  A
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSA 563

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ F  +RD   + + ++Y  LI GL
Sbjct: 564 IKFFHKMRDYGCKPDSITYGALISGL 589



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 200/400 (50%), Gaps = 6/400 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML      P  +S+ ++     +      V    K +   G   D  T +++I+ F
Sbjct: 215 VFDEMLD-RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTF 273

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G V+  F    + ++    PN + F+SLI GLC    I +A  +  +      +P+V
Sbjct: 274 SEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNV 333

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +T+  LI+GLC+ G T  A  LF ++   +       KPN  TY  +I+G CKE  +++A
Sbjct: 334 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDNY-----KPNVYTYTCMINGYCKEEKLNRA 388

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           + L ++MK++ + P+  TYT +I G C A ++  A  L   M  +G  P++ T++ I+D 
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDG 448

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G+  +A +LL   +  G++ +  TY  LI  +C       A  +F  M   G   D
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +YN LI  +C+ K VEE+  L+ E +  G+ PT  TY ++  G      +  A+K F 
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +MR      D+ TY   I GLC    + EA +L+  + D+
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDN 608



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 196/412 (47%), Gaps = 13/412 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A   F   ++M  +P  ++ F+ L   L K         + + +   G  P++YTH+ 
Sbjct: 280 NRAFWYFKKWVQMGLNPNLIN-FSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTA 338

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK G     F +  +++RS  + PN  T+T +I G C E ++  A  L  + +  
Sbjct: 339 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQ 398

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+  TY  LI+G C+ G+   A  L + M    G+ G    PN  TYN IIDGLCK+
Sbjct: 399 GLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM----GKEGFT--PNIFTYNAIIDGLCKK 452

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G   +A +L  +     ++ D VTYT +I  FC   D  +A  +F  M   G+QPD+ T+
Sbjct: 453 GRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTY 512

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +V++   C+  K++++ +L E  +  G+ P   TY ++I GYC    I  A K F  M  
Sbjct: 513 NVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRD 572

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC  D ++Y  LI+  C    ++EA  LY  M+  G+ P  VT  TL     +      
Sbjct: 573 YGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSAT 632

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           A+ + + + +        T N  I  LC    V  A   F  + D   +LN+
Sbjct: 633 AMIILERLEKKLWIR---TVNTLIRKLCSEKKVGVAALFFHKLLDK--DLNV 679



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 199/437 (45%), Gaps = 32/437 (7%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT--VLSLFKRLNSAGLFP 140
           N +T  + + +   + +   S   +S FN + G  +K +H+    ++     LN+  L  
Sbjct: 98  NSLTHEQVITVVASLAQEAGSVVSLSFFNWVIG-FSKFRHFMRLYIVCATTFLNNDNLDR 156

Query: 141 DIYTHSILINCFCKMGRV-----------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
                  ++  F ++G++           +HG V+  RIL      N V   +L  G   
Sbjct: 157 ATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARIL------NFVIDVALALGF-- 208

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
              +  A  +F +    A  PD  +Y  ++ G CR G         ++M     E G   
Sbjct: 209 ---VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMI----ERGYAV 261

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
              T T   +I    ++GFV++A   F K     +NP+++ ++S+I G C      +A  
Sbjct: 262 DNATCTL--MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFE 319

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGY 368
           +  EM+ +G +P+V T + ++D LCK G  +KA RL L+L+      PN YTY  +I+GY
Sbjct: 320 MLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGY 379

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  +K++ A  L + M+  G + +  +Y  LI+ +CK  +   A  L   M  +G  P +
Sbjct: 380 CKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNI 439

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TYN +  GL +  +   A KL     ++ + AD  TY   I   C+     +AL +F  
Sbjct: 440 FTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSR 499

Query: 489 IRDSKYELNIVSYNCLI 505
           +     + ++ +YN LI
Sbjct: 500 MFKVGLQPDMHTYNVLI 516



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 143/292 (48%), Gaps = 7/292 (2%)

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           ++      G    A+N+  EM N     G+V K   +  N +ID     GFVD A+++F 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQN----HGLVLKARIL--NFVIDVALALGFVDYAEKVFD 217

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M D  + PD  +Y  ++ G+C     ++  R   +M+++G   D  T ++++    + G
Sbjct: 218 EMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKG 277

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
            +++A    +  +  G+NPN   +++LI+G C    I  A ++   M   G   +V ++ 
Sbjct: 278 FVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337

Query: 398 TLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            LI+  CK    E+A  L+ +++ S   KP V TY  +  G  +  ++ RA  L   M+ 
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKE 397

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  +T TY   IDG CK+G    A EL   +    +  NI +YN +IDGL
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGL 449



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 114/230 (49%), Gaps = 1/230 (0%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           + ++N++        ++R F       EA  + IEM + G+       + ++D     G 
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D A ++ + M+ R V P++ +Y  ++ GYC   +I    +    M   G   D  +   
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I+ + +   V  A   + + +  G+ P ++ +++L  GL +I  +++A ++ +EM R  
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDG 507
              + YT+   IDGLCK G+  +A  LF + +R   Y+ N+ +Y C+I+G
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMING 378



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 94/221 (42%), Gaps = 27/221 (12%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ IL     +       L++F R+   GL PD++T+++LI  FC+  +V     +    
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEA 535

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P   T+TS+I G C +  I  A   F K R + C+PD  TY  LI+GLC     
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKL 595

Query: 229 IVALNLFEEMA-NGNGEFGVV--------CKPNTV-----------------TYNTIIDG 262
             A  L+E M  NG     V         CK                     T NT+I  
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRK 655

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           LC E  V  A   F K+ D+++N D +T  +     CY ++
Sbjct: 656 LCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTA-CYESN 695



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 15/173 (8%)

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           N  +D+A+ +++ M+                 +    K+  A  + + M+++G +     
Sbjct: 151 NDNLDRATEVMQCMV---------------RSFSEIGKLKEAVNMVIEMQNHGLVLKARI 195

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            N +I+       V+ A  ++ EML + + P   +Y  + +G   + ++    +   +M 
Sbjct: 196 LNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMI 255

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               A D  T    I    + GFV  A   F+         N+++++ LI+GL
Sbjct: 256 ERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGL 308


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  I  ++ R    P   +  +++ G   +N + D   ++F R+   G  P+  T+S 
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILG-HCRNHNLDLAFAMFDRMVKDGCDPNSVTYST 277

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  GR+     +L  +++    P   T+T  +  LC      EA  L  K +   
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P++ T+  LI+GL R G   +A+ L+ +M       G+V  P TVTYN +I+ LC EG
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV--PTTVTYNALINQLCVEG 391

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A  +F  M      P   TY  +I+ FC   D  +A  +F +M+  G  P+V+T++
Sbjct: 392 RFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYN 451

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK G ++ A RLLE+M   G+ P+ +TY  LI G+    K++HA  LF  M  +
Sbjct: 452 TLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + V+Y  +I+ Y     V++AL+L+ +M+  G  P+  TYN +  G  + + +  A
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                +M +  +  +  TY +FIDGLC++G    A ++F  +    Y  N+ +Y+ LI G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG 631

Query: 508 L 508
           L
Sbjct: 632 L 632



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 11/422 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +FD M++    P  V+ ++ L   L      +  + + + +   G+ P +YT++I +
Sbjct: 256 AFAMFDRMVKDGCDPNSVT-YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C  G  S    +LG++ +    PN  TFT+LI GL  + +   A  L+ K       
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P   TYN LIN LC  G    A  +F+ M + +G       P+T TYN II   C  G +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLS-HGSL-----PSTQTYNEIIKCFCLMGDI 428

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            KA  +F KM     +P+V+TY ++I G+C   + N A RL   M   G++PD  T++ +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    + GK++ A+ L   M+  G++PN  TY  +IDGY    K+D A  LF  M  +G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           +    +YN +I+ + K   + EA +   +M+ +G+ P V+TY +   GL    +   A K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKY--ELNIVSYNCLID 506
           +F EM + +   + YTY++ I GLC+ G   +A E++  + R + Y  E N+ +Y  L+ 
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 507 GL 508
           GL
Sbjct: 668 GL 669



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 198/406 (48%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L     ++T  ++FK + S G  P   T++ +I CFC MG +    V+
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L++  +PN +T+ +LI G C +  +  A  L    +    +PD +TY  LI+G  R
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +LF  M     E G+   PN VTY  IIDG      VD A  LF KM +   
Sbjct: 495 GGKLEHATSLFYGMM----EHGI--SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TY  +I GF   N  +EA+    +M+ QG+ P+V+T++  +D LC+NG+   A +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR--KLFVSMESNGCMHDVVSYNTLINW 402
           +   M  R   PN YTY++LI G C   + + A    L   +   GC  +V +Y TL+  
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C      EA  L   M  KG++P+   Y  L +G  +  +VE AL +F  M        
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              Y   I  LCK  F+ EA  +F+ + +  +  + V +  L+DGL
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 184/341 (53%), Gaps = 6/341 (1%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++L S   P+ +TF ++I  LC + R+ EA  + +    +   P+ FTY +LI G CR  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +  +A  +F+ M          C PN+VTY+T+I+GLC EG +++A ++  +M  + I P
Sbjct: 252 NLDLAFAMFDRMVKDG------CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V TYT  +   C A   +EA  L  +M  +G  P++ TF+ ++  L ++GK + A  L 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+  G+ P T TYN LI+  C+  + + A  +F  M S+G +    +YN +I  +C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D+++A+ ++ +ML  G  P V+TYNTL  G  +   +  A++L + M+ N +  D +TY
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              I G  + G +  A  LF  + +     N V+Y  +IDG
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 198/406 (48%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L+++  ++  + L+ ++ + GL P   T++ LIN  C  GR    F +
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+  T+  +IK  C    I +A  +F K       P+V TYNTLI G C+
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK 459

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+ L E M  GNG      KP+  TY  +I G  + G ++ A  LF  M +  I
Sbjct: 460 QGNLNNAMRLLEIM-KGNG-----LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+ VTYT++I G+      ++A  LF +M++ G  P   T++V++    K   + +A  
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
               M+ +G+ PN  TY + IDG C   +   A K+F  ME      ++ +Y++LI   C
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 405 KNKDVEEA--LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +    E+A   +L + +   G +P V TY TL  GL    +   A +L   M++  +   
Sbjct: 634 QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              Y   + G CK+  V  AL +F ++    ++L++  Y  LI  L
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 192/389 (49%), Gaps = 14/389 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GDI      +A+ IFD ML+   S P V ++N L     K  + +  + L + +   GL 
Sbjct: 426 GDIQ-----KAMVIFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD +T++ LI+ F + G++ H   +   ++    +PN VT+T++I G    +++ +A AL
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F K       P   TYN +I+G  +T     A N   +M       G++  PN +TY + 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ----GLL--PNVITYTSF 593

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK--RLFIEMMDQ 317
           IDGLC+ G    A ++F +M+  N  P++ TY+S+I G C      +A+   L   +   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G +P+V T++ ++  LC  G+  +A +L+  M  +G+ P+   Y  L+ G C   K++ A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             +F SM++ G    +  Y  LI   CK   +EEA  ++  ML K      V +  L  G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTY 466
           L +  + +  LKL   M   +   +  TY
Sbjct: 774 LLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 112/202 (55%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ ++I+M++ G++P ++TF+ +++ LCK G++ +A  ++  +      PN +TY +LI 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    +D A  +F  M  +GC  + V+Y+TLIN  C    +EEA+ +  EM+ KGI+P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           TV TY    + L +      A++L  +M++     +  T+   I GL + G    A+ L+
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +         V+YN LI+ L
Sbjct: 366 HKMLADGLVPTTVTYNALINQL 387



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 41/321 (12%)

Query: 223 CRTGHTIVALNLFEEMANGNGEFG-VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           CR    +  +  F    N   +FG  +C     ++ T++  L K   VD A+++++KM +
Sbjct: 141 CRNEGEVKRVTQFLSEINSKYDFGYTLC-----SFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             I P ++T+ ++I   C      EAK +   +      P+  T++ ++   C+N  +D 
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR----------------------- 378
           A  + + M+  G +PN+ TY+TLI+G C   +++ A                        
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 379 ------------KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                       +L   M+  GC+ ++ ++  LI+   ++   E A+ LY +ML+ G+ P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           T VTYN L   L    + E A  +F  M  +     T TYN  I   C  G + +A+ +F
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             +  +    N+++YN LI G
Sbjct: 436 DKMLKAGSSPNVITYNTLIYG 456



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 40/289 (13%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G  NL   ++AL +F  M+    + P   ++N++    +K        +   ++   GL 
Sbjct: 526 GYFNLAKVDDALALFWKMVE-SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA- 198
           P++ T++  I+  C+ GR    F +   + +  + PN  T++SLI GLC E R  +A   
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMY 644

Query: 199 -LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------------GE 244
            L  +   + CEP+V TY TL+ GLC  G    A  L   M                 GE
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704

Query: 245 FGVVCKPNTVT--------------------YNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               CK   V                     Y  +I  LCKE F+++A+ +F  M +++ 
Sbjct: 705 ----CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           N D V +T ++ G     + +   +L   M  +    +  T+ ++  EL
Sbjct: 761 NSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 95/184 (51%)

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           +F+ ++ +L K   +D A  +   M+  G+ P+  T+NT+I+  C   ++  A+ +   +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
                  +  +Y +LI  +C+N +++ A +++  M+  G  P  VTY+TL  GL    ++
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E A+ + +EM +  +    YTY   +  LC +G   EA+EL   ++      NI ++  L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 505 IDGL 508
           I GL
Sbjct: 349 ISGL 352



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 64/118 (54%)

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           + + S+ TL+    K   V+ A  +Y +ML+ GI+P+++T+NT+   L +  +V+ A  +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              + R     + +TY + I G C++  +  A  +F  +     + N V+Y+ LI+GL
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 224/438 (51%), Gaps = 23/438 (5%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT----------VLSLFKRLN 134
           +TP++A  +FD +LR     P     ++L G L+                  ++LF R++
Sbjct: 36  LTPDDAHHLFDGLLRQTAQVPE----SVLNGFLSALARAPASAALRDGPALAVALFNRMS 91

Query: 135 SAG----LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           +        P +YT+SILI+C C+  R+   F   G +LR     + +  +SL++GLC  
Sbjct: 92  TGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDA 151

Query: 191 SRIMEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            R  EA   LF +     C PD  +Y+T++  +C  G +  AL++        G     C
Sbjct: 152 KRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGG----C 207

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             N V Y+T++ GL KEG V +A +LF +M  + + P+VVTY SVI   C A   ++A+ 
Sbjct: 208 PCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQG 267

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  +M+  GVQPD VT++ ++      G+  +A R+ + M  RGV PNT T +T +   C
Sbjct: 268 ILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLC 327

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +I+ AR+ F SM + G   +++SY+TL++ Y     + +  +L++ M+  GI P   
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            +N L  G  +   V  A+ +F++M++  +  D  TY   I   C+ G + +A++ F  +
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447

Query: 490 RDSKYELNIVSYNCLIDG 507
            D   E N   Y CLI G
Sbjct: 448 IDKGVEPNFAVYQCLIQG 465



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 222/447 (49%), Gaps = 30/447 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +F  M +    PP V ++N +   L K +  D    + +++   G+ PD  T++ 
Sbjct: 228 GEACDLFHEMTQ-QGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNT 286

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ +  +G+      +   +      PN VT ++ +  LC   RI EA   F       
Sbjct: 287 LIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG 346

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFGVV---- 248
            + ++ +Y+TL++G    G  +   NLF  M                NG  + G+V    
Sbjct: 347 HKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAM 406

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+ +TY  +I   C+ G +D A + F  M D+ + P+   Y  +I+GF
Sbjct: 407 FIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGF 466

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C   D  +A+ L  E+ ++G+ P +++F+ +++ LCK G++ +A R+ +++I  G   + 
Sbjct: 467 CTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADV 526

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             + +LIDGYCL  K+  A ++  +M S G   D+V+Y TL+N  CKN  +++ L L+ E
Sbjct: 527 NIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRE 586

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +L KG+KPT  TY  +  GLF   +   A ++F EM  + +A    TY+  + GLC++  
Sbjct: 587 LLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNC 646

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLI 505
             EA+ +F+ +     + +IV  N +I
Sbjct: 647 TEEAITVFQKLCAMNVKFDIVILNIMI 673



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 193/405 (47%), Gaps = 9/405 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   FD ML        +S   +L G        D + +LF  +   G+ P+ +  +IL
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVD-MSNLFNLMVRDGIVPNQHVFNIL 392

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N + K G V     +   + +    P+ +T+ ++I   C    + +A   F        
Sbjct: 393 VNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV 452

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           EP+   Y  LI G C  G  + A  L  E+ N G G       P  +++ ++I+ LCKEG
Sbjct: 453 EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG-------PCILSFASLINHLCKEG 505

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+ +F  +       DV  +TS+I G+C     +EA R+   M+  G++PD+VT+ 
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYG 565

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  CKNG++D    L   ++ +GV P T+TY  ++DG     +   A+++F  M  +
Sbjct: 566 TLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIES 625

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    + +Y+ L+   C+N   EEA++++ ++ +  +K  +V  N +   +F+  + E A
Sbjct: 626 GIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEA 685

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             LF  +    +     TY   ++ L K G V EA  +F  +  S
Sbjct: 686 EGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKS 730



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 186/390 (47%), Gaps = 7/390 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ M+R     P    FNIL    AK       + +F+ +   GL PD+ T+  +I+ F
Sbjct: 373 LFNLMVR-DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+MG +         ++     PN   +  LI+G C    +++A  L  + R     P +
Sbjct: 432 CRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCI 491

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            ++ +LIN LC+ G    A  +F+ M    GE     K +   + ++IDG C  G + +A
Sbjct: 492 LSFASLINHLCKEGRVFEAQRIFD-MIIRTGE-----KADVNIFTSLIDGYCLIGKMSEA 545

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +   M    I PD+VTY +++ G C     ++   LF E++ +GV+P   T+ +I+D 
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L   G+   A  + + MI  G+     TY+ L+ G C  +  + A  +F  + +     D
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V  N +I+   K +  EEA  L++ +   G+ PTV TY  +   L +   VE A  +F 
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFS 725

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            M ++ ++  ++  N  +  L + G +++A
Sbjct: 726 VMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 15/418 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M     +P PP+  ++++     ++  +   + + + +++ G   D    ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNL 186

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C+ G V     +L ++       + V++ +++KGLC   R  +   L  +     
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y +V++G C A  W EA+ L  EM  +    D V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S GC  + VSY  ++   C      +A  L S+M+ +G  P  VT+NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 15/425 (3%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C +   GD+  +         D M+R+  +P  + +FN L G L +N 
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEEL--------MDEMVRVDCAPN-IVTFNTLIGYLCRNG 265

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
            ++ V  +  +++  G  PDI  ++ +I+  CK G +     +L R+      PN V + 
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC+  R  EA  L ++     C  D  T+N L++  C+ G     + L E+M + 
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                  C P+ +TY T+I+G CKEG +D+A  L   M      P+ V+YT V++G C A
Sbjct: 386 G------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             W +A+ L  +M+ QG  P+ VTF+ +++ LCK G +++A  LL+ M+  G +P+  +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           +T+IDG     K + A +L   M + G   + + Y+++     +   V + + ++  +  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
             I+   V YN +   L +  + +RA+  F  M  N    +  TY   I GL   G   E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 482 ALELF 486
           A EL 
Sbjct: 620 AQELL 624



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 198/402 (49%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + S+N +   L   K +  V  L   +      P+I T + LI   C+ G       VL 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++     TP+   + ++I G+C E  +  A  +  +   +  +P+V  YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L  EM      F   C  + VT+N ++D  C+ G VD+  EL  +M      P
Sbjct: 336 RWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV+TYT+VI GFC     +EA  L   M   G +P+ V++++++  LC  G+   A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI +G  PN  T+NTLI+  C    ++ A +L   M  NGC  D++SY+T+I+   K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              EEAL L + M++KGI P  + Y+++   L    +V + +++FD ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N  I  LCK      A++ F  +  +    N  +Y  LI GL
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 169/335 (50%), Gaps = 8/335 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PNA TF  +++GLC   RI +A  +  +     C P    Y+ ++   CR+G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 235 FEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
            E M A G       C  +T   N +++ +C++G VD+A  L  K+       D+V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           V++G C A  W + + L  EM+     P++VTF+ ++  LC+NG  ++   +L  M   G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             P+   Y T+IDG C    ++ A ++   M S G   +VV YNT++   C  +  +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L SEM  K      VT+N L     +   V+R ++L ++M  +    D  TY   I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK G + EA+ L +++     + N VSY  ++ GL
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++ S G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN V++T ++KGLC+  R ++A  L ++     C P+  T+NTLIN LC+ G  
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  ++A EL   M ++ I+P+
Sbjct: 478 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK  + D+A     
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G         A++L   + S G + 
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 15/418 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M     +P PP+  ++++     ++  +   + + + +++ G   D    ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNL 186

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C+ G V     +L ++       + V++ +++KGLC   R  +   L  +     
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y +V++G C A  W EA+ L  EM  +    D V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S GC  + VSY  ++   C      +A  L S+M+ +G  P  VT+NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 15/425 (3%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C +   GD+  +         D M+R+  +P  + +FN L G L +N 
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEEL--------MDEMVRVDCAPN-IVTFNTLIGYLCRNG 265

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
            ++ V  +  +++  G  PDI  ++ +I+  CK G +     +L R+      PN V + 
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC+  R  EA  L ++     C  D  T+N L++  C+ G     + L E+M + 
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                  C P+ +TY T+I+G CKEG +D+A  L   M      P+ V+YT V++G C A
Sbjct: 386 G------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             W +A+ L  +M+ QG  P+ VTF+ +++ LCK G +++A  LL+ M+  G +P+  +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           +T+IDG     K + A +L   M + G   + + Y+++     +   V + + ++  +  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
             I+   V YN +   L +  + +RA+  F  M  N    +  TY   I GL   G   E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 482 ALELF 486
           A EL 
Sbjct: 620 AQELL 624



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 198/402 (49%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + S+N +   L   K +  V  L   +      P+I T + LI   C+ G       VL 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++     TP+   + ++I G+C E  +  A  +  +   +  +P+V  YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L  EM      F   C  + VT+N ++D  C+ G VD+  EL  +M      P
Sbjct: 336 RWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV+TYT+VI GFC     +EA  L   M   G +P+ V++++++  LC  G+   A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI +G  PN  T+NTLI+  C    ++ A +L   M  NGC  D++SY+T+I+   K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              EEAL L + M++KGI P  + Y+++   L    +V + +++FD ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N  I  LCK      A++ F  +  +    N  +Y  LI GL
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 169/335 (50%), Gaps = 8/335 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PNA TF  +++GLC   RI +A  +  +     C P    Y+ ++   CR+G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 235 FEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
            E M A G       C  +T   N +++ +C++G VD+A  L  K+       D+V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           V++G C A  W + + L  EM+     P++VTF+ ++  LC+NG  ++   +L  M   G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             P+   Y T+IDG C    ++ A ++   M S G   +VV YNT++   C  +  +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L SEM  K      VT+N L     +   V+R ++L ++M  +    D  TY   I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK G + EA+ L +++     + N VSY  ++ GL
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++ S G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN V++T ++KGLC+  R ++A  L ++     C P+  T+NTLIN LC+ G  
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  ++A EL   M ++ I+P+
Sbjct: 478 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK  + D+A     
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G         A++L   + S G + 
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 189/342 (55%), Gaps = 6/342 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  +   GL  D  T++ LIN  C+ G +     VL  +       +AVT+T LI G C 
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  +  K       P+V TY  L +GLC+ G    A  L  EM +   E     
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL---- 493

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             N  TYN++I+GLCK G +++A    + M +  + PDV TYT++I   C + + + A  
Sbjct: 494 --NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM+D+G++P +VT++V+M+  C +G+++   RLLE M+ + ++PNT TYN+L+  YC
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           +   +    +++  M S   + +  +YN LI  +CK ++++EAL  +SEM+ KG + T  
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           +YN L   L +  +   A +LF++MR+  + A+   YN +ID
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 205/399 (51%), Gaps = 9/399 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+NIL   L           LF  + S    PD+ T+ I+++ +C +  +     +L  +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N V +TS+I  LC E ++ +A  +     +     D   + T+++G CR G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A N F+EM             + VTY  +I+GLC+ G + +A+ +  +M+D+ ++ D 
Sbjct: 372 AAARNWFDEMQKRG------LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT +I G+C      EA  +  +M+ + V P+VVT++ + D LCK G +  A+ LL  
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G+  N +TYN+LI+G C    ++ A +  + M+  G   DV +Y T+I   C++K+
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A SL  EML KGIKPT+VTYN L  G     +VE   +L + M   ++  +T TYN+
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   C    +    E+++ +   +   N  +YN LI G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 208/448 (46%), Gaps = 33/448 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +FD M     SPP V ++ I+          +T + L   + + GL  +   ++ 
Sbjct: 270 KDAHQLFDEM----ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   C  G+VS    V+  ++      +A  FT+++ G C +  +  A   F + +   
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK-------- 250
              D  TY  LINGLCR G    A  + +EM +   +   V         CK        
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 251 ------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       PN VTY  + DGLCK+G V  A EL  +M  + +  ++ TY S+I G 
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A +  +A R  I+M + G++PDV T++ I+  LC++ ++D+A  LL+ M+ +G+ P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN L++G+C++ +++  ++L   M       +  +YN+L+  YC  K+++    +Y  
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           MLS+ + P   TYN L  G  +   ++ AL    EM          +YN  I  L K   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLID 506
             EA  LF  +R  +       YN  ID
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 155/314 (49%), Gaps = 13/314 (4%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA  LF +      E +  +YN L+  LC  G    A  LF+EMA+          P+ V
Sbjct: 240 EAVQLFQE----LPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY  ++ G C    ++ A +L  +M    +  + V YTSVI   C     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +  GV  D   F+ +M   C+ G +  A    + M  RG+  +  TY  LI+G C   ++
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A ++   ME  G   D V+Y  LI+ YCK   + EA  ++++M+ K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +   V  A +L  EM    +  + +TYN+ I+GLCK+G + +A+     + ++  
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 495 ELNIVSYNCLIDGL 508
           + ++ +Y  +I  L
Sbjct: 527 KPDVYTYTTIIGAL 540


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 224/417 (53%), Gaps = 15/417 (3%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M  SP   +   IL G L + + +D+V   ++ + S GL PD++ +S+L  C  K G  S
Sbjct: 192 MRCSPDSKACLAILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPS 250

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               +L  +      PN   +T  I+ LC E+++ EA  +F   ++    P+++TY+ +I
Sbjct: 251 KKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMI 310

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +G C+TG+   A  L++E+            PN V + T++DG CK   +  A+ LF+ M
Sbjct: 311 DGYCKTGNLRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVAARSLFVHM 364

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               ++P++  Y  +I G C + +  EA  L  EM    + PDV T++++++ LC   ++
Sbjct: 365 VKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERL 424

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A+RL + M    + P++ TYN+LI G+C    I+ A  L   M S+G   ++++++TL
Sbjct: 425 AEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTL 484

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ YCK ++++ A+ LY EM  KGI P VVTY TL    F+   ++ AL+L+ +M    +
Sbjct: 485 IDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGI 544

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS--------YNCLIDGL 508
             + +T+   +DG  K G + +A++ +     +    +IV         + CLI+GL
Sbjct: 545 HPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGL 601



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 190/404 (47%), Gaps = 26/404 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M ++H   P + +++ +     K  +      L+K +  A L P++     L
Sbjct: 286 EAEKMFELM-KIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTL 344

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ FCK   +     +   +++    PN   +  LI G C    ++EA  L ++      
Sbjct: 345 VDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNL 404

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFTY  LINGLC       A  LF+ M N          P++VTYN++I G CKE  
Sbjct: 405 SPDVFTYTILINGLCTEERLAEANRLFQRMKNER------IFPSSVTYNSLIHGFCKEYN 458

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++KA +L  +M    + P+++T++++I G+C   +   A  L+ EM  +G+ PDVVT++ 
Sbjct: 459 IEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTT 518

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV------ 382
           ++D   K   M +A RL   M+  G++PN +T+  L+DG+    ++  A   ++      
Sbjct: 519 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAA 578

Query: 383 ---SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
              S+    C    V +  LI   C+N  +  A   +S+M S G+ P + +Y ++     
Sbjct: 579 TGKSIVQRSCW-KYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHL 637

Query: 440 EIHQVERALKLFDEMRR---------NHVAADTYTYNNFIDGLC 474
              ++   + L  +M +         N + A  Y  N ++   C
Sbjct: 638 REKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSAC 681


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/418 (33%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +FD M++    P  V+ ++ L   L      D  L + + +   G+ P +YT+++ I
Sbjct: 294 AFGVFDRMVKEGCDPNSVT-YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C +        ++ R+ +    PN  T+T+LI GL    ++  A  L+ K       
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN LIN LC  G    AL +F  M  G+G        NT TYN II GLC  G +
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDI 466

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +KA  LF KM      P VVTY ++I G+    + N A RL   M + G +PD  T++ +
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 526

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    K GK++ AS   + M+  G+NPN  +Y TLIDG+    K+D A  L   ME  GC
Sbjct: 527 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +V SYN +IN   K     EA  +  +M  +G+ P V+TY TL  GL    + + A K
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +F +M +     + YTY++ I GLC+ G   EA  L + +       + V++  LIDG
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/416 (33%), Positives = 208/416 (50%), Gaps = 11/416 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IF Y L      P V ++  L     +N++ D    +F R+   G  P+  T+S LIN  
Sbjct: 266 IFQYDL-----SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 320

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  GRV     +L  ++     P   T+T  I  LCA     EA  L  + +   C P+V
Sbjct: 321 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY  LI+GL R G   VA+ L+ +M       G+V  PNTVTYN +I+ LC  G    A
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNALINELCVGGRFSTA 434

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++F  M+      +  TY  +I+G C   D  +A  LF +M+  G  P VVT++ +++ 
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
               G ++ A+RLL+LM   G  P+ +TYN L+ G+    K++ A   F  M   G   +
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            VSY TLI+ + K+  V+ ALSL   M   G  P V +YN +  GL + ++   A K+ D
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +M    +  +  TY   IDGLC++G    A ++F  +   K   N+ +Y+ LI GL
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 6/382 (1%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           V      ++  G    +Y+ + L+    K   V     +  ++L S   P+ +TF +LI 
Sbjct: 189 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 248

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
            L  + ++ EA  + ++   +   PDVFTY +LI G CR  +  +A  +F+ M       
Sbjct: 249 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--- 305

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
              C PN+VTY+T+I+GLC EG VD+A ++  +M ++ I P V TYT  I   C      
Sbjct: 306 ---CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 362

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  L   M  +G +P+V T++ ++  L + GK++ A  L   M+  G+ PNT TYN LI
Sbjct: 363 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 422

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +  C+  +   A K+F  ME +G + +  +YN +I   C   D+E+A+ L+ +ML  G  
Sbjct: 423 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 482

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           PTVVTYNTL  G      V  A +L D M+ N    D +TYN  + G  K G +  A   
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
           F+ + +     N VSY  LIDG
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDG 564



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S N L   LAK +  +   +L+K++ ++G+ P + T + LIN   K G+V    ++L +I
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 266

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +   +P+  T+TSLI G C    +  A  +F +     C+P+  TY+TLINGLC  G  
Sbjct: 267 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 326

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ EEM     E G+  +P   TY   I  LC     ++A EL  +MK     P+V
Sbjct: 327 DEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT++I G         A  L+ +M+ +G+ P+ VT++ +++ELC  G+   A ++   
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 440

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G   NT TYN +I G CL   I+ A  LF  M   G +  VV+YNTLIN Y    +
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V  A  L   M   G +P   TYN L  G  +  ++E A   F EM    +  +  +Y  
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            IDG  K G V  AL L   + +     N+ SYN +I+GL
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 210/421 (49%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + + M+      P V ++ +    L   +H +  + L  R+   G  P++ T++ 
Sbjct: 327 DEALDMLEEMIE-KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 385

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   ++G++     +  ++L+    PN VT+ +LI  LC   R   A  +F       
Sbjct: 386 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 445

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +  TYN +I GLC  G    A+ LFE+M     + G +  P  VTYNT+I+G   +G
Sbjct: 446 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKML----KMGPL--PTVVTYNTLINGYLTKG 499

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A  L   MK+    PD  TY  ++ GF        A   F EM++ G+ P+ V+++
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 559

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K+GK+D A  LLE M   G NPN  +YN +I+G    ++   A K+   M   
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ 619

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + +V++Y TLI+  C+N   + A  ++ +M  +   P + TY++L  GL +  + + A
Sbjct: 620 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 679

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L  EM R  +A D  T+ + IDG    G +  A  L R + D   + N  +Y+ L+ G
Sbjct: 680 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739

Query: 508 L 508
           L
Sbjct: 740 L 740



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 216/453 (47%), Gaps = 36/453 (7%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GDI      +A+ +F+ ML+M P P  V+   ++ G L K  + +    L   +   G  
Sbjct: 464 GDIE-----KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG-NVNNAARLLDLMKENGCE 517

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD +T++ L++ F K G++         ++     PN V++T+LI G   + ++  A +L
Sbjct: 518 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C P+V +YN +INGL +      A  + ++MA    E G++  PN +TY T+
Sbjct: 578 LERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA----EQGLL--PNVITYTTL 631

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLC+ G    A ++F  M+     P++ TY+S+I G C     +EA+ L  EM  +G+
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY-----CLTDKI 374
            PD VTF+ ++D     G++D A  LL  M+  G  PN  TY+ L+ G       L +K+
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751

Query: 375 -------------------DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
                              +    L   M   GC   + +Y+TL++  C+     EA  L
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             +M  +G  P    Y +L +   +  +V+ ALK+F  +           Y   I  LCK
Sbjct: 812 VKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 871

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G V EA  LF  + + ++  + + +  L+DGL
Sbjct: 872 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 196/426 (46%), Gaps = 34/426 (7%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F  M+    +P PVS +  L    +K+   D  LSL +R+   G  P++ +++ +IN   
Sbjct: 543 FQEMVECGLNPNPVS-YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K  R S    +  ++      PN +T+T+LI GLC   R   A  +F       C P+++
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY++LI GLC+ G    A  L +EM            P+ VT+ ++IDG    G +D A 
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKG------LAPDEVTFTSLIDGFVVLGRIDHAF 715

Query: 274 ELFLKMKDENINPDVVTYTSVIRGF-----------------CYANDWNE-------AKR 309
            L  +M D    P+  TY+ +++G                   Y+   +E          
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSN 775

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L   M + G +P + T+S ++  LC+ G+  +A +L++ M  RG  P+   Y +L+  +C
Sbjct: 776 LLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 835

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++DHA K+F S+E+ G    +  Y  LI   CK   VEEA +L+  ML K      +
Sbjct: 836 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 895

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL---F 486
            +  L  GL +  +++  +KL   M   +   +  TY      L + G  +E+  L    
Sbjct: 896 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955

Query: 487 RAIRDS 492
           + ++DS
Sbjct: 956 KVLKDS 961



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%)

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           E+   G    + + + ++ +L K   ++ A  L + M+  G+ P+  T+NTLI+      
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K+  A  +   +       DV +Y +LI  +C+N++++ A  ++  M+ +G  P  VTY+
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  GL    +V+ AL + +EM    +    YTY   I  LC      EA+EL   ++  
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374

Query: 493 KYELNIVSYNCLIDGL 508
               N+ +Y  LI GL
Sbjct: 375 GCRPNVQTYTALISGL 390



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 404 CKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           C+N++ +       +E+   G   ++ + NTL + L +   VE A  L+ +M  + +   
Sbjct: 180 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 239

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             T+N  I+ L K G V EA  +   I       ++ +Y  LI G
Sbjct: 240 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 284


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 15/418 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M     +P PP+  ++++     ++  +   + + + +++ G   D    ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNL 186

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C+ G V     +L ++       + V++ +++KGLC   R  +   L  +     
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y +V++G C A  W EA+ L  EM  +    D V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S GC  + VSY  ++   C      +A  L S+M+ +G  P  VT+NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 210/425 (49%), Gaps = 15/425 (3%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C +   GD+  +         D M+R+  +P  V+ FN L G L +N 
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEEL--------MDEMVRVDCAPNIVT-FNTLIGYLCRNG 265

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
            ++ V  +  +++  G  PDI  ++ +I+  CK G +     +L R+      PN V + 
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC+  R  EA  L ++     C  D  T+N L++  C+ G     + L E+M + 
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                  C P+ +TY T+I+G CKEG +D+A  L   M      P+ V+YT V++G C A
Sbjct: 386 G------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             W +A+ L  +M+ QG  P+ VTF+ +++ LCK G +++A  LL+ M+  G +P+  +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           +T+IDG     K + A +L   M + G   + + Y+++     +   V + + ++  +  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
             I+   V YN +   L +  + +RA+  F  M  N    +  TY   I GL   G   E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 482 ALELF 486
           A EL 
Sbjct: 620 AQELL 624



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 198/402 (49%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + S+N +   L   K +  V  L   +      P+I T + LI   C+ G       VL 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++     TP+   + ++I G+C E  +  A  +  +   +  +P+V  YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L  EM      F   C  + VT+N ++D  C+ G VD+  EL  +M      P
Sbjct: 336 RWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV+TYT+VI GFC     +EA  L   M   G +P+ V++++++  LC  G+   A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI +G  PN  T+NTLI+  C    ++ A +L   M  NGC  D++SY+T+I+   K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              EEAL L + M++KGI P  + Y+++   L    +V + +++FD ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N  I  LCK      A++ F  +  +    N  +Y  LI GL
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 169/335 (50%), Gaps = 8/335 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PNA TF  +++GLC   RI +A  +  +     C P    Y+ ++   CR+G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 235 FEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
            E M A G       C  +T   N +++ +C++G VD+A  L  K+       D+V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           V++G C A  W + + L  EM+     P++VTF+ ++  LC+NG  ++   +L  M   G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             P+   Y T+IDG C    ++ A ++   M S G   +VV YNT++   C  +  +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L SEM  K      VT+N L     +   V+R ++L ++M  +    D  TY   I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK G + EA+ L +++     + N VSY  ++ GL
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++ S G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN V++T ++KGLC+  R ++A  L ++     C P+  T+NTLIN LC+ G  
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  ++A EL   M ++ I+P+
Sbjct: 478 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK  + D+A     
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G         A++L   + S G + 
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 219/423 (51%), Gaps = 14/423 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ MLR+   P  VS+FN L   L K         L  ++   G+  +++T +I 
Sbjct: 199 EAYELFNDMLRIGIFPD-VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C+ G +S    +L  ++R   TP+ VT+ +LI GLC  S ++EA     K      
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCK 265
           EPD FTYNTLI+G C+ G    A  + +         G +CK   P+  TY ++I+GLC+
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQ---------GAICKGFVPDEFTYCSLINGLCQ 368

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+A  LF     + + P V+ Y  +I+G C      +A ++  EM + G   D+ T
Sbjct: 369 NDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWT 428

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++++++ LCK G +  A+ L+   I +G  P+ +T+NTLIDGYC   K++   ++   M 
Sbjct: 429 YNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMW 488

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S+G   DV++YN+++N   K    E+ +  +  M+ KG  P  +TYN L   L +  +V 
Sbjct: 489 SHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVN 548

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-KYELNIVSYNCL 504
            AL L DE+    +  DT ++   I G   +G +  A +LFR + +  K      +YN +
Sbjct: 549 EALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIM 608

Query: 505 IDG 507
           I+ 
Sbjct: 609 INA 611



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 215/421 (51%), Gaps = 7/421 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ AL + + M+        V+   ++ G   +N   +    LF  +   G+FPD+ T +
Sbjct: 162 PHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA-YELFNDMLRIGIFPDVSTFN 220

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            L++  CK G V     +L ++L+     N  TF   I+GLC +  +  A ++       
Sbjct: 221 KLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE 280

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV TYNTLI GLC+  + + A     ++ NG  E      P+  TYNT+IDG CK 
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE------PDGFTYNTLIDGYCKM 334

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +  A+++      +   PD  TY S+I G C  ++ + A  LF   + +G++P V+ +
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++  LC+ G + +A +++  M   G + + +TYN +I+G C    +  A  L     +
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + DV ++NTLI+ YCK   +E  + + ++M S G+ P V+TYN++  GL +  + E 
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            ++ F+ M       +  TYN   + LCK+G V EAL+L   I +     + VS+  +I 
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 507 G 507
           G
Sbjct: 575 G 575



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 199/381 (52%), Gaps = 6/381 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           + +F+R++     P + +++ ++N   + G       V  R+      P+  TFT  IK 
Sbjct: 96  VDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKS 155

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
            C   R   A  L        C+ +   Y T++ G     + + A  LF +M       G
Sbjct: 156 FCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML----RIG 211

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
           +   P+  T+N ++  LCK+G V +++ L  K+  + +  ++ T+   I+G C     + 
Sbjct: 212 IF--PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  +   ++ +G+ PDVVT++ ++  LCKN  + +A + L  ++  G+ P+ +TYNTLID
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GYC    + +A K+       G + D  +Y +LIN  C+N +++ AL+L++  L KG+KP
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           TV+ YN L  GL +   + +AL++ +EM  N  ++D +TYN  I+GLCK G V +A  L 
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
                  Y  ++ ++N LIDG
Sbjct: 450 NDAIAKGYVPDVFTFNTLIDG 470



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 219/456 (48%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F+ M   +   P V S+N +   L ++ ++     +F R+ + G+ PD+YT +I
Sbjct: 93  QEAVDVFERM-DFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151

Query: 148 LINCFCKMGR-----------VSHG------------------------FVVLGRILRSC 172
            I  FC+  R           VS G                        + +   +LR  
Sbjct: 152 RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG 211

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+  TF  L+  LC +  + E+  L  K        ++FT+N  I GLCR G    A+
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAM 271

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           ++ + +            P+ VTYNT+I GLCK   V +A++   K+ +  + PD  TY 
Sbjct: 272 SMLDSVIREG------LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G+C       A+++    + +G  PD  T+  +++ LC+N ++D+A  L    + +
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P    YN LI G C    I  A ++   M  NGC  D+ +YN +IN  CK   V +A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            +L ++ ++KG  P V T+NTL  G  +  ++E  +++ ++M  + V  D  TYN+ ++G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+    + +E F  + +     N ++YN L + L
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESL 541



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 199/439 (45%), Gaps = 66/439 (15%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ + D ++R     P V ++N L   L KN +         +L + GL PD +T++ LI
Sbjct: 270 AMSMLDSVIR-EGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +CKMG + +   +L   +   F P+  T+ SLI GLC    I  A ALF        +
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFGVVCK---- 250
           P V  YN LI GLC+ G  + AL +  EM+               NG  + G V      
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 251 ----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                     P+  T+NT+IDG CK+  ++   ++  KM    + PDV+TY SV+ G   
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           A    +    F  M+++G  P+ +T++++ + LCK GK+++A  L++ ++ +G+ P+T +
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568

Query: 361 YNTLIDGYC----------------------------------LTDKID--HARKLFVSM 384
           + T+I G+                                     +K+D     KLF+ M
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEM 628

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            + GC  D  +Y  +I+ +C   + +       EM+ KG  P++ T+  +   L   H+V
Sbjct: 629 GAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRV 688

Query: 445 ERALKLFDEMRRNHVAADT 463
             A+ +   M  N +  + 
Sbjct: 689 HEAVDIIHFMVHNGIVPEV 707



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 166/343 (48%), Gaps = 8/343 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL +F+  L      P V  +N+L   L +       L +   ++  G   DI+T+++
Sbjct: 373 DRALALFNAALG-KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  CKMG VS    ++   +   + P+  TF +LI G C + ++     +  K     
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV TYN+++NGL +       +  FE M          C PN +TYN + + LCK G
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG------CVPNKITYNILTESLCKAG 545

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTF 326
            V++A +L  ++ ++ I PD V++ ++I GF    D   A +LF  M +Q  V     T+
Sbjct: 546 KVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATY 605

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++++   +   +    +L   M   G  P+TYTY  +IDG+C+T   D   K  + M  
Sbjct: 606 NIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            G +  + ++  +IN  C    V EA+ +   M+  GI P VV
Sbjct: 666 KGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 128/243 (52%)

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           ++G V +A ++F +M   N  P V++Y +++     +  + +A ++F+ M + G+ PDV 
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++ +   C+  +   A RLL  M+ +G   N   Y T++ G+   +    A +LF  M
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   DV ++N L++  CK  +V+E+  L +++L KG+   + T+N    GL     +
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A+ + D + R  +  D  TYN  I GLCK+  V+EA +    + +   E +  +YN L
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 505 IDG 507
           IDG
Sbjct: 328 IDG 330



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 142/281 (50%), Gaps = 10/281 (3%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG-FVDKAKELFLKMKDENINPDVV 289
           AL +F ++   +G      K + +TY  II  L   G FV  A E  L     +I+  ++
Sbjct: 23  ALEMFNKVKREDG-----FKHSLLTYKCIIQKLGFHGNFV--AMENVLAETRMDIDNSLL 75

Query: 290 --TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
              Y   ++ +       EA  +F  M     +P V++++ IM+ L ++G   +A ++  
Sbjct: 76  EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+ YT+   I  +C T +   A +L  +M S GC  + V+Y T++  + +  
Sbjct: 136 RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN 195

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
              EA  L+++ML  GI P V T+N L   L +  +V+ + +L +++ +  + ++ +T+N
Sbjct: 196 YRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFN 255

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            FI GLC+ G +  A+ +  ++       ++V+YN LI GL
Sbjct: 256 IFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGL 296


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 15/418 (3%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M     +P PP+  ++++     ++  +   + + + +++ G   D    ++
Sbjct: 129 DALEVLDEMSFKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNL 186

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  C+ G V     +L ++       + V++ +++KGLC   R  +   L  +     
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           C P++ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y +V++G C A  W EA+ L  EM  +    D V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S GC  + VSY  ++   C      +A  L S+M+ +G  P  VT+NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 209/425 (49%), Gaps = 15/425 (3%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  S    LK  C +   GD+  +         D M+R+    P + +FN L G L +N 
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEEL--------MDEMVRVD-CAPNIVTFNTLIGYLCRNG 265

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
            ++ V  +  +++  G  PDI  ++ +I+  CK G +     +L R+      PN V + 
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++KGLC+  R  EA  L ++     C  D  T+N L++  C+ G     + L E+M + 
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                  C P+ +TY T+I+G CKEG +D+A  L   M      P+ V+YT V++G C A
Sbjct: 386 G------CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             W +A+ L  +M+ QG  P+ VTF+ +++ LCK G +++A  LL+ M+  G +P+  +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           +T+IDG     K + A +L   M + G   + + Y+++     +   V + + ++  +  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
             I+   V YN +   L +  + +RA+  F  M  N    +  TY   I GL   G   E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 482 ALELF 486
           A EL 
Sbjct: 620 AQELL 624



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 198/402 (49%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + S+N +   L   K +  V  L   +      P+I T + LI   C+ G       VL 
Sbjct: 216 IVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++     TP+   + ++I G+C E  +  A  +  +   +  +P+V  YNT++ GLC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L  EM      F   C  + VT+N ++D  C+ G VD+  EL  +M      P
Sbjct: 336 RWKEAEELLSEM------FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV+TYT+VI GFC     +EA  L   M   G +P+ V++++++  LC  G+   A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI +G  PN  T+NTLI+  C    ++ A +L   M  NGC  D++SY+T+I+   K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              EEAL L + M++KGI P  + Y+++   L    +V + +++FD ++   + +D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N  I  LCK      A++ F  +  +    N  +Y  LI GL
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 169/335 (50%), Gaps = 8/335 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PNA TF  +++GLC   RI +A  +  +     C P    Y+ ++   CR+G    ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 235 FEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
            E M A G       C  +T   N +++ +C++G VD+A  L  K+       D+V+Y +
Sbjct: 169 LEAMHAKG-------CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           V++G C A  W + + L  EM+     P++VTF+ ++  LC+NG  ++   +L  M   G
Sbjct: 222 VLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             P+   Y T+IDG C    ++ A ++   M S G   +VV YNT++   C  +  +EA 
Sbjct: 282 CTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAE 341

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L SEM  K      VT+N L     +   V+R ++L ++M  +    D  TY   I+G 
Sbjct: 342 ELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK G + EA+ L +++     + N VSY  ++ GL
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL 436



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N   D V+ L +++ S G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN V++T ++KGLC+  R ++A  L ++     C P+  T+NTLIN LC+ G  
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  ++A EL   M ++ I+P+
Sbjct: 478 EQAIELLKQMLVNG-------CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N+  ++F  + D  ++ D V ++ ++  LCK  + D+A     
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G         A++L   + S G + 
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALR 634


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 206/413 (49%), Gaps = 14/413 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +    LFK +   G+ PD+YT++ILI+CF K G +      
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++R    P  VT+T+LI       ++  A  LF       C P+V TY  LI+G C+
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 225 TGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +G+   A  ++  M  G+ +             V  KPN VTY  ++DGLCK   V  A+
Sbjct: 607 SGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  +   P+ + Y ++I GFC A   +EA+ +F +M++ G  P+V T+S ++D L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D   ++L  M+     PN   Y  +IDG     K D A KL + ME  GC  +V
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K   V++ L L+ EM SKG  P  VTY  L         ++ A  L +E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           M++ +      +Y   I+G  K  F+L +L L   +  +     I+ Y  LID
Sbjct: 846 MKQTYWPKHVSSYCKVIEGY-KREFIL-SLGLLEEVEKNGSAPIILLYKVLID 896



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 198/459 (43%), Gaps = 59/459 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC----KMGRVSH 160
           P    +N +   L +   ++  +    R+ S    P++ T+ IL+ C C    ++GR   
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILL-CGCLNKKQLGRCKR 364

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              ++  I   C+ P+   F SL+   C       A  L  K     C+P    YN LI 
Sbjct: 365 ILSMM--IAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG 421

Query: 221 GLCRTGHTI--VALNLFEEMAN----------------------GNGEFGVVCK------ 250
            +C  G     V   L E+  N                      G G+F    K      
Sbjct: 422 SICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMM 481

Query: 251 -----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
                P+T TY+ +I  LC    V+ A  LF +MK   + PDV TYT +I  F  A    
Sbjct: 482 GNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIK 541

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +A     EM+  G +P VVT++ ++    K  K+  A+ L ELMI +G  PN  TY  LI
Sbjct: 542 QAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALI 601

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDV----------------VSYNTLINWYCKNKDV 409
           DGYC +  I+ A +++  M  +  + DV                V+Y  L++  CK   V
Sbjct: 602 DGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A  L   M   G +P  + Y+ L  G  +  +++ A ++F +M  +    + YTY++ 
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSL 721

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ID L K   +   L++   + ++    NIV Y  +IDGL
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGL 760



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 31/426 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    DT   + + ++  GL  D +T        CK+G+       
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA--- 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I +  F PN + +  +I GLC  S   EA     + R  +C P+V TY  L+ G C 
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-CL 354

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +        M    G     C P+   +N+++   CK      A +L  KM+    
Sbjct: 355 NKKQLGRCKRILSMMIAEG-----CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC 409

Query: 285 NPDVVTYTSVIRGFCYAND------WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            P  V Y  +I   C   +      +  A++ + EM+  G   + V        LC  GK
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            +KA +++  M+  G  P+T TY+ +I   C   ++++A  LF  M+  G + DV +Y  
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI+ + K   +++A +   EM+  G +PTVVTY TL     +  +V  A +LF+ M    
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIR--------DSKYEL--------NIVSYN 502
              +  TY   IDG CKSG + +A +++  +R        D  +++        N+V+Y 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 503 CLIDGL 508
            L+DGL
Sbjct: 650 ALVDGL 655



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 10/313 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    ++ L     K    D    +F ++   G  P++YT+S LI+   K  R+     V
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L +   PN V +T +I GL   ++  EA  L        C+P+V TY  +I+G  +
Sbjct: 738 LSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGK 797

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     L LF EM +        C PN VTY  +I+  C  G +D+A  L  +MK    
Sbjct: 798 AGKVDKCLELFREMGSKG------CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYW 851

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              V +Y  VI G  Y  ++  +  L  E+   G  P ++ + V++D   K G+++ A  
Sbjct: 852 PKHVSSYCKVIEG--YKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALE 909

Query: 345 LLELMIWRGVN--PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           L + +I   ++       Y +LI  +    KI HA +LF  M  +G + D+ ++  L+  
Sbjct: 910 LHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMG 969

Query: 403 YCKNKDVEEALSL 415
             + +  EEAL L
Sbjct: 970 LIRVRRWEEALQL 982



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 156/366 (42%), Gaps = 15/366 (4%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++LI   C+ G  +     LGR+    + P  +T+ +L++      ++  A  +  +   
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                D FT       LC+ G    AL+L E+      +F     PNT+ YN +I GLC+
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEK-----EDF----VPNTILYNKMISGLCE 320

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
             F ++A +   +M+  +  P+V TY  ++ G          KR+   M+ +G  P    
Sbjct: 321 ASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTI 380

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI------DHARK 379
           F+ ++   CK+     A +LL+ M      P    YN LI   C   ++      + A K
Sbjct: 381 FNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEK 440

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
            +  M S G + + V+  +     C     E+A  +  EM+  G  P   TY+ +   L 
Sbjct: 441 AYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              +VE A  LF EM+   V  D YTY   ID   K+G + +A      +     E  +V
Sbjct: 501 NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 560

Query: 500 SYNCLI 505
           +Y  LI
Sbjct: 561 TYTTLI 566



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 30/297 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M+  H   P V +++ L   L K+K  D VL +  ++      P+I  ++ 
Sbjct: 697 DEAQEVFHKMVE-HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+   K+ +    + ++  +      PN VT+T++I G     ++ +   LF +     
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV--VCK--------------- 250
           C P+  TY  LIN  C TGH   A  L EEM        V   CK               
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGL 875

Query: 251 ----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT--YTSVIRGF 298
                     P  + Y  +ID   K G ++ A EL  ++   +++       YTS+I  F
Sbjct: 876 LEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSF 935

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            YA+    A  LF +M+  GV PD+ TF  ++  L +  + ++A +L + +    +N
Sbjct: 936 SYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N LI   C+N     AL     +   G KPT +TYN L        +++ A  +  EM  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ++ D +T   F   LCK G   EAL L   I    +  N + YN +I GL
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSL---IEKEDFVPNTILYNKMISGL 318


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 216/422 (51%), Gaps = 11/422 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSF--NILFGCLAKNKHYDTVLSLFK-RLNSAGLFPDIYTHS 146
           +L  F ++ R H      ++F  N L   L K + +     +F+  L       +  T++
Sbjct: 50  SLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYN 109

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI  FCK G +   F +L  +     +P+ VT +S+++ LC    +  A   F +    
Sbjct: 110 TLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES--V 167

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PD   +N L++GLC+      A  + EEM+    E G+V  P+ VTYN++IDGLCK 
Sbjct: 168 ECAPDSVLFNILVHGLCKANQLSEARQMIEEMS----ERGIV--PDVVTYNSLIDGLCKS 221

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +++A++L   M    + P++VTY ++I G+C       A +L   M+  G  PDVVTF
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++   C+  K+DKA  +L LM      PN  TYN LI G C   + + A +L   M+ 
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + D+++YN+LI  +C+N  +E+A  + + M+ +G+ P  ++Y TL + L +  + + 
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDE 401

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  L D M       + +T+N+ ++GLC S  + EA  L   +R    +    +Y  L+ 
Sbjct: 402 AFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVT 461

Query: 507 GL 508
           GL
Sbjct: 462 GL 463



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 201/401 (50%), Gaps = 12/401 (2%)

Query: 88  NEALCIF-DYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           ++A  IF D +L  H     ++ +N L G   K    +    L   +   G  PD+ THS
Sbjct: 86  HQAYQIFRDELLGQHCDTNHIT-YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHS 144

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            ++   C  G +S         +     P++V F  L+ GLC  +++ EA  +  +    
Sbjct: 145 SIVQALCNTGNLSRAMQYFRESVEC--APDSVLFNILVHGLCKANQLSEARQMIEEMSER 202

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV TYN+LI+GLC++     A  L E M           +PN VTYNT+I G CK 
Sbjct: 203 GIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK------VRPNLVTYNTLIYGYCKT 256

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVT 325
           G    A +L  +M     +PDVVT+ S+I GFC  +  ++A  + + +M +G+  P++VT
Sbjct: 257 GCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV-LHLMKKGLCAPNLVT 315

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++V++  LC  G+ ++A  LL  M  RG+ P+  TYN+LI  +C   +I+ A ++   M 
Sbjct: 316 YNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV 375

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G + D +SY TL     K++  +EA +L   M   G  P + T+N+L  GL    +++
Sbjct: 376 ERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLD 435

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            A  L   MRR        TY   + GLCK+G V +A E+ 
Sbjct: 436 EARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVL 476



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 181/367 (49%), Gaps = 6/367 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FNIL   L K         + + ++  G+ PD+ T++ LI+  CK  R+     +
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++    PN VT+ +LI G C       A  L  +       PDV T+N+LI+G C+
Sbjct: 231 LETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ 290

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +   M  G      +C PN VTYN +I GLC  G  ++A EL  +M    I
Sbjct: 291 KSKIDKACEVLHLMKKG------LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD++TY S+I  FC      +A ++   M+++GV PD +++  +   L K+ + D+A  
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G  PN +T+N+L++G C + ++D AR L   M   GC     +Y  L+   C
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V++A  +   M+S+GI+P V +  T+   L    + + AL  FD++      A   
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDP 524

Query: 465 TYNNFID 471
           +Y   ++
Sbjct: 525 SYQKLLE 531


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 215/445 (48%), Gaps = 44/445 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L +    + + SL   +    L P++  ++ +I+  CK    S   VV
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+A+TF++LI GLC E R+ EA  L  +   +   P++ +Y +LI+G C 
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 225 TGHTIVALNLFEEMAN----------GNGEFGVVCK-------------------PNTVT 255
            G  IVA NL  EM            G    G+V                     P+   
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I GLCK+  +  A+ L  +M ++N++PD   YT++I GF      +EA+++F  M 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+ PDVV ++ ++   C+ G M++A   +  M   G  P+ +TY TLI GY     I 
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   M    C  +VV+Y++LIN YCK  D + A  L+  M S+G+ P V+TY  L 
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL--------------- 480
             LF+  +V RA   F+ M  N  + + YT ++ + GLC S   +               
Sbjct: 687 GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKG 746

Query: 481 EALELFRAIRDSKYELNIVSYNCLI 505
             L++FRA+ + + +    +YN +I
Sbjct: 747 ALLDIFRALVNDRCDPRNSAYNAII 771



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 198/381 (51%), Gaps = 6/381 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L L +    AG  P+   +++LI+ +C+ G V  G ++LG +      P  VT+ +L+  
Sbjct: 279 LKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSW 338

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           L  +  + + A+L ++ R     P+V  YN++I+ LC+      AL + ++M  G     
Sbjct: 339 LGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG---- 394

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
             C P+ +T++T+I GLC+EG V +A+ L  +     +NP++ +YTS+I GFC   +   
Sbjct: 395 --CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  L +EMM++G  PDVVTF  ++  L   G++ +A  + E M  R + P+   YN LI 
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C    +  AR L   M       D   Y TLI+ + +N+ ++EA  ++  M  KGI P
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            VV YN +  G  +   +  A++    MR+     D +TY   I G  K G +  AL L 
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             +   + + N+V+Y+ LI+G
Sbjct: 633 CDMMKRRCQPNVVAYSSLING 653



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 186/399 (46%), Gaps = 6/399 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N+L     +       + L   + + GL P + T+  L++   + G +     +L  + 
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMR 356

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN   + S+I  LC      +A  +  +     C+PD  T++TLI+GLC+ G   
Sbjct: 357 ERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQ 416

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L  E             PN  +Y ++I G C  G V  A  L ++M +    PDVV
Sbjct: 417 EAERLLRETTRWE------LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVV 470

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T+ ++I G   A   +EA  +  +M  + + PD   ++V++  LCK   +  A  L+E M
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + + V+P+ Y Y TLIDG+   + +D ARK+F  ME  G   DVV YN +I  YC+   +
Sbjct: 531 LEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMM 590

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            EA+   S M   G  P   TY TL  G  +   +  AL L  +M +     +   Y++ 
Sbjct: 591 NEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSL 650

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I+G CK G    A  LF ++       N+++Y  LI  L
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSL 689



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 185/423 (43%), Gaps = 42/423 (9%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M R H   P V +F  L   L         L + +++ +  L PD   +++LI+  
Sbjct: 457 LVEMMERGHT--PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGL 514

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK   +     ++  +L     P+   +T+LI G      + EA  +F         PDV
Sbjct: 515 CKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDV 574

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN +I G C+ G    A+     M     + G +  P+  TY T+I G  K+G +  A
Sbjct: 575 VGYNAMIKGYCQFGMMNEAVECMSTMR----KVGRI--PDEFTYTTLIGGYAKQGNISGA 628

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L   M      P+VV Y+S+I G+C   D + A+ LF  M  QG+ P+V+T+++++  
Sbjct: 629 LSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGS 688

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC--LTDKIDHARKLFVSMESNGCM 390
           L K  K+ +A+   E M+    +PN YT ++L+ G C  +   I       V++   G +
Sbjct: 689 LFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGAL 748

Query: 391 HDVV-------------SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            D+              +YN +I   C +  + EAL L ++M +KG KP   T+ +L  G
Sbjct: 749 LDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYG 808

Query: 438 L----------------FEIHQVERALK---LFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
                            F+  ++E A +   LFD+     V  + Y+        C+S  
Sbjct: 809 FCSVGKSREWRTILPNEFQRDELEVASRYKILFDQYVVKSVGCEVYSVFQLYLEECRSSK 868

Query: 479 VLE 481
            +E
Sbjct: 869 QME 871



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 122/285 (42%), Gaps = 35/285 (12%)

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            ++ GLC EG V+K  +L          P+ V Y  +I G+C   D      L  EM  +
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ P VVT+  +M  L + G ++K + LL  M  R + PN   YN++ID  C       A
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA---------------LSLYS----- 417
             +   M + GC  D ++++TLI+  C+   V+EA               LS Y+     
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443

Query: 418 ---------------EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
                          EM+ +G  P VVT+  L  GL    QV  AL + ++M    +  D
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              YN  I GLCK   +  A  L   + +     +   Y  LIDG
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDG 548



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 4/294 (1%)

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           ++ L+  L R G          +M+       V   P       ++      G   KA E
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAV---PTRACLGALVATYADAGMEAKAAE 209

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +  + ++ +      T+T+ +         W++A++L+ EM+ +    D  +  V++  L
Sbjct: 210 MCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGL 269

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C  G ++K  +L+E     G  PN   YN LIDGYC    +     L   ME+ G +  V
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y TL++W  +  D+E+  SL SEM  + + P V  YN++   L +     +AL +  +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           M       D  T++  I GLC+ G V EA  L R     +   N+ SY  LI G
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 85/169 (50%)

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A +L + M+      + Y+   ++ G CL   ++   KL  +    GC+ + V YN L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ YC+  DV   + L  EM +KG+ PTVVTY TL   L     +E+   L  EMR   +
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +   YN+ ID LCK     +AL + + +     + + ++++ LI GL
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGL 409



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 120/298 (40%), Gaps = 43/298 (14%)

Query: 88  NEALCIFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +EA  IF++M +  +HP    V  +N +     +    +  +     +   G  PD +T+
Sbjct: 556 DEARKIFEFMEQKGIHPD---VVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTY 612

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + LI  + K G +S    +L  +++    PN V ++SLI G C       A  LF     
Sbjct: 613 TTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMES 672

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC- 264
               P+V TY  LI  L +    + A   FE M          C PN  T ++++ GLC 
Sbjct: 673 QGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ------CSPNDYTLHSLVTGLCN 726

Query: 265 ------------------KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                             K   +D    +F  + ++  +P    Y ++I   C  N   E
Sbjct: 727 SMASIISSHCSSTVNLHGKGALLD----IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGE 782

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           A  L  +M ++G +PD  TF  ++   C  GK  +         WR + PN +  + L
Sbjct: 783 ALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSRE---------WRTILPNEFQRDEL 831


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 210/412 (50%), Gaps = 19/412 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V +FN +   LA+ +    +  ++  +   A + PD+ T+ IL+N  CK GRV     VL
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 166 GRILRSCFT--PNAVTFTSLIKGLCAESRIMEAAALFTKHR---VFACEPDVFTYNTLIN 220
             + R      P+ VT  +++ GLC   R+ EA A F + R   V  C P+  TYN LI+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLID 254

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
             CR G+  +A  L E+M N     GV    N VT NTI+ GLC+ G    A E F + +
Sbjct: 255 AFCRVGNISMAYELVEKMEN----EGV--PQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308

Query: 281 DENINPD----VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
              + P+     VTY++++    + N+   A  LF E M +G  PD + +  ++  L + 
Sbjct: 309 --TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A  +   M   G   +T  YN LI G+C   ++  A +L   M+  G   DV +Y
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           NTL++  CK  D      L  +M+  G +P+V+T+ TL  G  ++ +++ AL++   M  
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  +   YN  ID LCK G V  A+ELF  +++     N+ ++N L+ GL
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 201/406 (49%), Gaps = 21/406 (5%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLF-K 131
           CK+   GD        AL + D M R      P V + N +   L K+      L+   +
Sbjct: 183 CKAGRVGD--------ALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ 234

Query: 132 RLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           R++S  G  P+  T++ LI+ FC++G +S  + ++ ++       N VT  +++ GLC  
Sbjct: 235 RMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294

Query: 191 SRIMEAAALFTKHRVFACEP--DVFTYNTLINGLCRTGHTIVALNLF-EEMANGNGEFGV 247
            R   A   F + R    E   +  TY+TL+  L  T +  +A+ LF E+M+ G+     
Sbjct: 295 GRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH----- 349

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P+ + Y T+I GL + G ++ A  +   MK+     D   Y  +I GFC     +EA
Sbjct: 350 --SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L  EM + G++PDV T++ ++   CK G       LL  MI  G  P+  T+ TL+ G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   KID A ++  SM+ +G   + V YNTLI++ CK  DV+ A+ L+ EM  K +   
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           V T+N L  GL + +  E+A +L D+MR      D  T +  ++ L
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 7/229 (3%)

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           DV  + S++       D     R++  M     V+PDVVT+ ++++ LCK G++  A R+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 346 LELMIWR--GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES--NGCMHDVVSYNTLIN 401
           L+ M  +   + P+  T NT++DG C + ++  A        S  +GC  + V+YN LI+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR--NHV 459
            +C+  ++  A  L  +M ++G+   +VT NT+  GL    +   AL+ F E R      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  TY+  +  L  +  V  A+ELF       +  + + Y  +I GL
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 239/475 (50%), Gaps = 21/475 (4%)

Query: 44  SYPTTTSKLKESLRLTVKDRASL---KKFLKE----RCKSSGQGDINLITPNEALCIFDY 96
           ++   +SK +   RL +   ASL   K F K     +C      +I  +   EA+   + 
Sbjct: 100 NWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRV--KEAI---EM 154

Query: 97  MLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           ++ MH     P   + N +   + +    +   +LF  + + G+ P+  ++ +++  +CK
Sbjct: 155 VIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCK 214

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
           +G V      LG ++   F  +  T + +++  C +  +  A   F +       P++  
Sbjct: 215 LGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLIN 274

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           +  +I GLC+ G    A  + EEM  G G      KPN  T+  +IDGLCK+G+ +KA  
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMV-GRG-----WKPNVYTHTALIDGLCKKGWTEKAFR 328

Query: 275 LFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           LFLK+ + EN  P+V+TYT++I G+C     N A+ L   M +QG+ P+  T++ ++D  
Sbjct: 329 LFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGH 388

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK G  ++A  L+ +M   G +PN  TYN ++DG C   ++  A K+  S   NG   D 
Sbjct: 389 CKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADK 448

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  LI+ +CK  ++++AL L+++M+  GI+P + +Y TL        +++ +   F+E
Sbjct: 449 VTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEE 508

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             R  +     TY + I G C+ G +  AL+ F  + D     + ++Y  LI GL
Sbjct: 509 AVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGL 563



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 206/442 (46%), Gaps = 19/442 (4%)

Query: 60  VKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK 119
           V D A+L   ++E C+         +T   AL  F     M   P  ++ F  +   L K
Sbjct: 234 VVDNATLSLIVREFCEK------GFVT--RALWYFRRFCEMGLRPNLIN-FTCMIEGLCK 284

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS-CFTPNAV 178
                    + + +   G  P++YTH+ LI+  CK G     F +  +++RS    PN +
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+T++I G C + ++  A  L ++ +     P+  TY TLI+G C+ G+   A     E+
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAY----EL 400

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            N   E G    PN  TYN I+DGLCK+G V +A ++        ++ D VTYT +I   
Sbjct: 401 MNVMNEEGF--SPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEH 458

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C   +  +A  LF +M+  G+QPD+ +++ ++   C+  +M ++    E  +  G+ P  
Sbjct: 459 CKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTN 518

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY ++I GYC    +  A K F  M  +GC  D ++Y  LI+  CK   ++EA  LY  
Sbjct: 519 KTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDA 578

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ KG+ P  VT  TL    +E  +++        + R        T N  +  LC    
Sbjct: 579 MIEKGLTPCEVTRVTL---AYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERK 635

Query: 479 VLEALELFRAIRDSKYELNIVS 500
           V  A   F  + D    +N V+
Sbjct: 636 VGMAALFFHKLLDKDPNVNRVT 657



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 27/221 (12%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ IL     K       L LF ++  +G+ PDI++++ LI  FC+  R+    +     
Sbjct: 450 TYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEA 509

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +R    P   T+TS+I G C E  +  A   F +     C  D  TY  LI+GLC+    
Sbjct: 510 VRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKL 569

Query: 229 IVALNLFEEMAN--------------------GNGEFGVVC------KPNTVTYNTIIDG 262
             A  L++ M                       +G   +V       K    T NT++  
Sbjct: 570 DEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRK 629

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           LC E  V  A   F K+ D++ N + VT  + +   CY ++
Sbjct: 630 LCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTA-CYESN 669


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 217/414 (52%), Gaps = 16/414 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG-------- 156
           P V +FN L   L K         L  ++   G+ P+++T +I +   C+ G        
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273

Query: 157 -RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            RV      L +++   F P+ +T+ S+I G C +  + +A  +         +PD FTY
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            +LING C+ G    A+ +F++        G   +P+ V YNT+I GL ++G +  A +L
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKD------GLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +M +    P++ TY  VI G C     ++A  L  + + +G  PD+ T++ ++D  CK
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             K+D A+ ++  M  +G+ P+  TYNTL++G C   K +   ++F +ME  GC  ++++
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YN +++  CK K V EA+ L  EM SKG+KP VV++ TLF G  +I  ++ A +LF  M 
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567

Query: 456 RNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + + V   T TYN  +    +   +  A++LF  +++S  + +  +Y  +IDG 
Sbjct: 568 KQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 218/465 (46%), Gaps = 51/465 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+  F+ M   +   P V S N +   L +  +++    ++ R+   G+  D+YT++I
Sbjct: 93  QEAVDTFERM-DFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTI 151

Query: 148 LINCFCKMGR--------------------VSHGFVVLG---------------RILRSC 172
            I  FCK  R                    V++  VV G                +L  C
Sbjct: 152 RIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARC 211

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG------ 226
             P+ V F  L+  LC +  + E+  L  K       P++FT+N  + GLCR G      
Sbjct: 212 LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAV 271

Query: 227 ---HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                + A     +M NG  E      P+ +TYN+IIDG CK+G V  A  +      + 
Sbjct: 272 RNSRVVEAEEYLRKMVNGGFE------PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD  TY S+I GFC   D + A  +F + + +G++P +V ++ ++  L + G +  A 
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L+  M   G  PN +TYN +I+G C    +  A  L     + GC  D+ +YNTLI+ Y
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   ++ A  + + M S+G+ P V+TYNTL  GL +  + E  +++F  M       + 
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  +D LCK+  V EA++L   ++    + ++VS+  L  G 
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 216/430 (50%), Gaps = 19/430 (4%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  AL +   M  +      V+   ++ G     +H D    LF  + +  L PD+   +
Sbjct: 162 PYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH-DHARELFDEMLARCLCPDVVAFN 220

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE---------SRIMEAA 197
            L++  CK G V     +LG++L+    PN  TF   ++GLC E         SR++EA 
Sbjct: 221 KLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAE 280

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
               K      EPD  TYN++I+G C+ G    A  + ++            KP+  TY 
Sbjct: 281 EYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG------FKPDEFTYC 334

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           ++I+G CK+G  D+A  +F     + + P +V Y ++I+G         A +L  EM + 
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P++ T++++++ LCK G +  AS L++  I +G  P+ +TYNTLIDGYC   K+D A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            ++   M S G   DV++YNTL+N  CK    EE + ++  M  KG  P ++TYN +   
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDS 514

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL- 496
           L +  +V  A+ L  EM+   +  D  ++     G CK G +  A +LFR + + +Y++ 
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM-EKQYDVC 573

Query: 497 -NIVSYNCLI 505
               +YN ++
Sbjct: 574 HTTATYNIIV 583



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 186/353 (52%), Gaps = 11/353 (3%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PD +T+  LIN FCK G       V    L     P+ V + +LIKGL  +  I+ A
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVT 255
             L  +     C P+++TYN +INGLC+ G    A +L ++ +A G       C P+  T
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG-------CPPDIFT 437

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+IDG CK+  +D A E+  +M  + + PDV+TY +++ G C A    E   +F  M 
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++G  P+++T+++I+D LCK  K+++A  LL  M  +G+ P+  ++ TL  G+C    ID
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557

Query: 376 HARKLFVSMESN-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            A +LF  ME      H   +YN +++ + +  ++  A+ L+S M + G  P   TY  +
Sbjct: 558 GAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVV 617

Query: 435 FLGLFEIHQVERALK-LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             G  ++  + +  K L + M +  + + T T+   ++ LC    V EA+ + 
Sbjct: 618 IDGFCKMGNITQGYKFLLENMEKRFIPSLT-TFGRVLNCLCVKDKVHEAVGII 669



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 15/389 (3%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+ +F   L     P  V  +N L   L++       L L   +   G  P+I+T++
Sbjct: 346 PDRAMAVFKDGLGKGLRPSIVL-YNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYN 404

Query: 147 ILINCFCKMGRVSHG-FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++IN  CKMG VS    +V   I + C  P+  T+ +LI G C + ++  A  +  +   
Sbjct: 405 LVINGLCKMGCVSDASHLVDDAIAKGC-PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWS 463

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               PDV TYNTL+NGLC+ G +   + +F+ M          C PN +TYN I+D LCK
Sbjct: 464 QGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG------CTPNIITYNIIVDSLCK 517

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVV 324
              V++A +L  +MK + + PDVV++ ++  GFC   D + A +LF  M  Q  V     
Sbjct: 518 AKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTA 577

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+++I+    +   M+ A +L  +M   G +P+ YTY  +IDG+C    I    K  +  
Sbjct: 578 TYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLEN 637

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
                +  + ++  ++N  C    V EA+ +   ML KGI P  V  NT+F    ++   
Sbjct: 638 MEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEADKKVVAA 695

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            + L + D +++ H+A   YTY    DG+
Sbjct: 696 PKIL-VEDLLKKGHIA--YYTYELLYDGI 721



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 9/253 (3%)

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           ++G V +A + F +M   N +P V ++ +++         N+A ++++ M D+GVQ DV 
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+++ +   CK  +   A RLL  M   G + N   Y T++ G   + + DHAR+LF  M
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            +     DVV++N L++  CK   V E+  L  ++L +G+ P + T+N    GL     +
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 445 ERALK---------LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           +RA++            +M       D  TYN+ IDG CK G V +A  + +      ++
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 496 LNIVSYNCLIDGL 508
            +  +Y  LI+G 
Sbjct: 328 PDEFTYCSLINGF 340



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 17/288 (5%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
           AL +F    + +G      K    TY  I+  L   G  ++ ++L  +M+ EN+N  ++ 
Sbjct: 23  ALEMFNSAKSEDG-----FKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR-ENVNNALLE 76

Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y   ++ +       EA   F  M      P V + + IM+ L + G  ++A ++   
Sbjct: 77  GAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR 136

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RGV  + YTY   I  +C T +   A +L  +M   GC  + V+Y T++     + +
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            + A  L+ EML++ + P VV +N L   L +   V  + +L  ++ +  V  + +T+N 
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 469 FIDGLCKSGF---------VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           F+ GLC+ G          V+EA E  R + +  +E + ++YN +IDG
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDG 304



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 53/114 (46%)

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y   +  Y +   V+EA+  +  M      P+V ++N +   L E     +A K++  M
Sbjct: 78  AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           R   V +D YTY   I   CK+     AL L R + +   + N V+Y  ++ GL
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGL 191


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 219/466 (46%), Gaps = 66/466 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS----------------------------- 135
           PP+   N L   LA+++ +  + SL  R+ +                             
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSL 98

Query: 136 --AGLFPDIYTHSILINCFCKMGRVSHG---FVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
             AGL PD Y ++  +  +C+ G ++H    FV++   LR C    A T+T+L+ GL   
Sbjct: 99  LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLR-TAFTYTALLHGLLGA 155

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT------------------IVAL 232
             + EA A+F   R  +C PD   Y T+++GLC  G T                  IV  
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 233 NLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           N   +     GE            G  C PN  TY  +I GLCK G V++A  LF +M +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             + P+VVTYT++I+G C       A RL   M   G+ P+  TFSV++D LCK  K+++
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A   L  ++ +GV  N   Y +LIDG C T KID A +L   M S G + D  SY++LI+
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+ K + +A  +  +M+ KGI+ + VTY  +   L      E   K+FD+M    +  
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TY  F+   C+ G + +A  +   + D     N+V+YN LI G
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 189/394 (47%), Gaps = 9/394 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L          +  L +F+ ++     P++ T++ LI+  CK G+V    V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++ +   PN VT+T+LI+G C E  +  A  L          P+ +T++ LI+ LC+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +    LF       G      K N V Y ++IDGLCK G +D A EL  KM  E  
Sbjct: 330 R-EKVEEAQLFLGSLVKKG-----VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y+S+I G C     ++A  +  +MM++G+Q   VT+++I+DEL +    +   +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + MI  G+NP+  TY   +  YC   +++ A  + V M   G   ++V+YNTLI  Y 
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL---KLFDEMRRNHVAA 461
               V +A S +  M+ KG KP   +Y  L   + +    + ++   K+ D         
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNY 563

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           D   +   I GL + G V E   L   +++  Y+
Sbjct: 564 DEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 597



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 152/321 (47%), Gaps = 21/321 (6%)

Query: 200 FTKHRVFACEPD------------VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
             +HR+F   PD            + TY TLIN  C  G    A      + +       
Sbjct: 51  LARHRMF---PDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG----- 102

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P++  Y + + G C+ G +  A  +F+ M          TYT+++ G   A    EA
Sbjct: 103 -LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +F+ M      PD   ++ ++  LC+ G+ ++A  LLE  +  G  PN   YN LIDG
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   +++HA K+F  M+ N C  +V +Y  LI+  CK+  VE A+ L+S M+  G++P 
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY  L  G      ++ A +L   M  N +  + +T++  ID LCK   V EA     
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           ++     ++N V Y  LIDGL
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGL 362


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + + +   L + + +   L LF  + S+GL PD+Y ++ ++   C++        V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +GR+  S    +  T+   I+GLC   R+ EA  +           DV TY TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +      EEM N   EFG V  P+    + ++DGL K+G +  A +L  K+K   +
Sbjct: 298 ----VEEFEAGEEMMNEMIEFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +  Y ++I   C     +EA+ LF  M  +G+ P+ VT+S+++D  CK GK+D A  
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M   G+    Y Y++LI G+C   K+  A+ LF  M +NG   +VV Y +LI+ YC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  ++  A  LY EM  KGI P   T+  L  GL   +++  A KLF EM   +V  +  
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I+G CK G  + A EL   + +     +  +Y  LI GL
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 200/355 (56%), Gaps = 15/355 (4%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           SLF  + + GL P++  ++ LI+ +CK G + + F +   +     +PN  TFT+LI GL
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C  +R+ EA  LF +   +   P+  TYN LI G C+ G+T+ A  L +EM     E G+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGL 561

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELF--LKMKDENIN------PDVVTYTSVIRGFC 299
           V  P+T TY  +I GLC  G V +A+E    L+ + + +N      P+VVTYT++I G C
Sbjct: 562 V--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLC 619

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                ++A+ L  EM+     P+  T++  +D L   G ++KA +L ++++  G   NT 
Sbjct: 620 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTV 678

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TYN LI G+C   +I  A ++ V+M  +G   D +SY+T+I  YC+  D++EA+ L+  M
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L++G+ P  V YN L  G     ++ +A +L D+M R  V  +  TYN+ I G C
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 202/410 (49%), Gaps = 14/410 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+    L KN+     + +   L+  GL  D+ T+  L+   CK+     G  ++ 
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++   F P+    ++L+ GL  +  I  A  L  K + F   P +F YN LIN +C+ G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A +LF  M +  G F     PN VTY+ +ID  CK G +D A     KM +  I  
Sbjct: 370 KLDEAESLFNNMGH-KGLF-----PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V  Y+S+I G C       AK LF EM+  G++P+VV ++ ++   CK G++  A RL 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G++PNTYT+  LI G C  +++  A KLF  M     + + V+YN LI  +CK 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-----RRNHVAA 461
            +   A  L  EM+ KG+ P   TY  L  GL    +V  A +  +++     + N +  
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603

Query: 462 ---DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +  TY   I+GLCK G + +A  L R +  S    N  +Y C +D L
Sbjct: 604 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 208/441 (47%), Gaps = 40/441 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   + K+   D   SLF  +   GLFP+  T+SILI+ FCK G++      
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG++           ++SLI G C   ++  A +LF +      +P+V  Y +LI+G C+
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 225 TGHTIVALNLFEEM-------------------------ANGNGEFGVVCK----PNTVT 255
            G    A  L+ EM                         A  N  FG + +    PN VT
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I+G CKEG   +A EL  +M ++ + PD  TY  +I G C     +EA+    ++ 
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 316 DQ--------GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            +        G  P+VVT++ +++ LCK G MDKA  L   M+     PN  TY   +D 
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652

Query: 368 YCLTDKIDHARKLF-VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                 I+ A +L  V +E  G + + V+YN LI  +CK   ++EA  +   M+  GI P
Sbjct: 653 LTSEGNIEKAIQLHDVLLE--GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             ++Y+T+         ++ A+KL++ M    V  DT  YN  I G C +G + +A EL 
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             +     + N  +YN LI G
Sbjct: 771 DDMMRRGVKPNRATYNSLIHG 791



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 163/364 (44%), Gaps = 37/364 (10%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +FD M+  +   P V  +  L     K         L+  +   G+ P+ YT + LI
Sbjct: 444 AKSLFDEMI-ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  C   R++    + G ++     PN VT+  LI+G C E   + A  L  +       
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV--CKPNTVTYNTIIDGLCKEG 267
           PD +TY  LI+GLC TG    A     ++     +   +  C PN VTY  +I+GLCK G
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIG 622

Query: 268 FVDKAKELFLKMKDENINPD----------------------------------VVTYTS 293
            +DKA+ L  +M   N  P+                                   VTY  
Sbjct: 623 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNI 682

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +IRGFC      EA  + + M+D G+ PD +++S I+ E C+ G + +A +L E M+ RG
Sbjct: 683 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 742

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           VNP+T  YN LI G C+T ++  A +L   M   G   +  +YN+LI+  C    V    
Sbjct: 743 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTA 802

Query: 414 SLYS 417
             +S
Sbjct: 803 DYFS 806



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 146/321 (45%), Gaps = 37/321 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F  L   L           LF  +    + P+  T+++LI   CK G     F +
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--------HRVFACEPDVFTYN 216
           L  ++     P+  T+  LI GLC+  R+ EA              + +  C P+V TY 
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYT 612

Query: 217 TLINGLCRTGHTIVALNLFEEM--------------------ANGNGEFGVVCK------ 250
            LINGLC+ G    A  L  EM                    + GN E  +         
Sbjct: 613 ALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEG 672

Query: 251 --PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              NTVTYN +I G CK G + +A E+ + M D  I+PD ++Y+++I  +C   D  EA 
Sbjct: 673 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 732

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L+  M+++GV PD V ++ ++   C  G++ KA  L + M+ RGV PN  TYN+LI G 
Sbjct: 733 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 792

Query: 369 CLTDKIDHARKLFVSMESNGC 389
           CL   +      F S + N C
Sbjct: 793 CLMSSVSSTADYF-SCKLNWC 812



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 98/195 (50%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           MMD G+ P + T S +++ L +  +   A  L + ++  G+ P+ Y Y  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              AR++   MES+GC   V +YN  I   CKN+ V EA+ + + +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L LGL ++ + E   ++ +EM            +N +DGL K G +  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 494 YELNIVSYNCLIDGL 508
              ++  YN LI+ +
Sbjct: 351 VAPSLFVYNALINSM 365



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 109/228 (47%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M D  I P + T + V+ G      +  A  LF E++  G++PDV  ++ ++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
             +A  ++  M   G + +  TYN  I G C   ++  A ++   +   G   DV +Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           L+   CK ++ E    + +EM+  G  P+    + L  GL +   +  A  L +++++  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           VA   + YN  I+ +CK G + EA  LF  +       N V+Y+ LID
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + ++ LI  Y +N+   + L +   M+  GI P + T + +  GL  I Q   AL LFDE
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  + +  D Y Y   +  LC+    + A E+   +  S  +L++ +YN  I GL
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGL 260


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 208/412 (50%), Gaps = 19/412 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V +FN +   LA+ +    +  ++  +   A + PD+ T+ IL+N  CK GRV     VL
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 166 GRILRSCFT--PNAVTFTSLIKGLCAESRIMEAAALFTKHR---VFACEPDVFTYNTLIN 220
             + R      P+ VT  +++ GLC   R+ EA A F + R   V  C P+  TYN LI+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLID 254

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
             CR G+  +A  L E+M N           N VT NTI+ GLC+ G    A E F + +
Sbjct: 255 AFCRVGNISMAYELVEKMENEG------VPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308

Query: 281 DENINPD----VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
              + P+     VTY++++    + N+   A  LF E M +G  PD + +  ++  L + 
Sbjct: 309 --TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A  +   M   G   +T  YN LI G+C   ++  A +L   M+  G   DV +Y
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           NTL++  CK  D      L  +M+  G +P+V+T+ TL  G  ++ +++ AL++   M  
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  +   YN  ID LCK G V  A+ELF  +++     N+ ++N L+ GL
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 201/406 (49%), Gaps = 21/406 (5%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLF-K 131
           CK+   GD        AL + D M R      P V + N +   L K+      L+   +
Sbjct: 183 CKAGRVGD--------ALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ 234

Query: 132 RLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           R++S  G  P+  T++ LI+ FC++G +S  + ++ ++       N VT  +++ GLC  
Sbjct: 235 RMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294

Query: 191 SRIMEAAALFTKHRVFACEP--DVFTYNTLINGLCRTGHTIVALNLF-EEMANGNGEFGV 247
            R   A   F + R    E   +  TY+TL+  L  T +  +A+ LF E+M+ G+     
Sbjct: 295 GRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH----- 349

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P+ + Y T+I GL + G ++ A  +   MK+     D   Y  +I GFC     +EA
Sbjct: 350 --SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L  EM + G++PDV T++ ++   CK G       LL  MI  G  P+  T+ TL+ G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   KID A ++  SM+ +G   + V YNTLI++ CK  DV+ A+ L+ EM  K +   
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           V T+N L  GL + +  E+A +L D+MR      D  T +  ++ L
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 7/229 (3%)

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           DV  + S++       D     R++  M     V+PDVVT+ ++++ LCK G++  A R+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 346 LELMIWR--GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES--NGCMHDVVSYNTLIN 401
           L+ M  +   + P+  T NT++DG C + ++  A        S  +GC  + V+YN LI+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR--NHV 459
            +C+  ++  A  L  +M ++G+   +VT NT+  GL    +   AL+ F E R      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  TY+  +  L  +  V  A+ELF       +  + + Y  +I GL
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 219/466 (46%), Gaps = 66/466 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS----------------------------- 135
           PP+   N L   LA+++ +  + SL  R+ +                             
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSL 98

Query: 136 --AGLFPDIYTHSILINCFCKMGRVSHG---FVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
             AGL PD Y ++  +  +C+ G ++H    FV++   LR C    A T+T+L+ GL   
Sbjct: 99  LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLR-TAFTYTALLHGLLGA 155

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT------------------IVAL 232
             + EA A+F   R  +C PD   Y T+++GLC  G T                  IV  
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 233 NLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           N   +     GE            G  C PN  TY  +I GLCK G V++A  LF +M +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             + P+VVTYT++I+G C       A RL   M   G+ P+  TFSV++D LCK  K+++
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A   L  ++ +GV  N   Y +LIDG C T KID A +L   M S G + D  SY++LI+
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+ K + +A  +  +M+ KGI+ + VTY  +   L      E   K+FD+M    +  
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TY  F+   C+ G + +A  +   + D     N+V+YN LI G
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 18/414 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L          +  L +F+ ++     P++ T++ LI+  CK G+V    V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++ +   PN VT+T+LI+G C E  +  A  L          P+ +T++ LI+ LC+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +    LF       G      K N V Y ++IDGLCK G +D A EL  KM  E  
Sbjct: 330 R-EKVEEAQLFLGSLVKKG-----VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y+S+I G C     ++A  +  +MM++G+Q   VT+++I+DEL +    +   +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + MI  G+NP+  TY   +  YC   +++ A  + V M   G   ++V+YNTLI  Y 
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLF------------LGLFEIHQVERALKLFD 452
               V +A S +  M+ KG KP   +Y  L             + +++I  ++    L +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           ++    +      Y+ FI  LC+   + EA   F  ++++    +   Y  +ID
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 190/416 (45%), Gaps = 18/416 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L        H      L   + + GL P+ +T S+LI+  CK  +V    + 
Sbjct: 280 PNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLF 339

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG +++     N V +TSLI GLC   +I  A  L  K       PD  +Y++LI+GLCR
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + E+M     E G+   P  VTY  IID L +E   +  K++F KM    I
Sbjct: 400 QKKLSQATLMLEDMM----EKGIQASP--VTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPD+VTYT  +R +C      +A+ + ++M+D+GV P++VT++ ++      G + +A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 345 LLELMIWRGVNPNTYTYNTLI---------DGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             E+M+ +G  PN  +Y  L+         D      KI   + L V +E        ++
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 396 ---YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
              Y+  I   C+   +EEA   +  M +  + P+   Y ++      +  +  AL L D
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLD 633

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M ++       +Y   I  LC+ G    A E+F  +   +   + + +  LI GL
Sbjct: 634 SMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGL 689



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 152/321 (47%), Gaps = 21/321 (6%)

Query: 200 FTKHRVFACEPD------------VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
             +HR+F   PD            + TY TLIN  C  G    A      + +       
Sbjct: 51  LARHRMF---PDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG----- 102

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P++  Y + + G C+ G +  A  +F+ M          TYT+++ G   A    EA
Sbjct: 103 -LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +F+ M      PD   ++ ++  LC+ G+ ++A  LLE  +  G  PN   YN LIDG
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   +++HA K+F  M+ N C  +V +Y  LI+  CK+  VE A+ L+S M+  G++P 
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY  L  G      ++ A +L   M  N +  + +T++  ID LCK   V EA     
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           ++     ++N V Y  LIDGL
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGL 362



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 147/388 (37%), Gaps = 58/388 (14%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  L   L K    D    L +++ S G  PD +++S LI+  C+  ++S   ++L  ++
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                 + VT+T +I  L  E        +F K       PD+ TY   +   C  G   
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A ++  +M +  G F     PN VTYNT+I G    G V +A   F  M  +   P+  
Sbjct: 475 DAESMIVQMVD-RGVF-----PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528

Query: 290 TYTSV-----------------------------------------------IRGFCYAN 302
           +YT +                                               IR  C  +
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              EAK  F+ M +  + P    ++ I+D  C+   +  A  LL+ M   G  P+  +Y 
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYR 648

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            +I   C       A+++F  +      +D + +  LI    +   V E  SL S M   
Sbjct: 649 IIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH 708

Query: 423 GIKPTVVTYNTLFLGLF----EIHQVER 446
           G +P+  T N +  G      E+ ++ R
Sbjct: 709 GYQPS-NTINAMITGEITVTNEVQEIAR 735



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 109/299 (36%), Gaps = 54/299 (18%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IFD M+    +P  V+ + +      +    +   S+  ++   G+FP++ T++ LI  +
Sbjct: 444 IFDKMIATGINPDIVT-YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSL----------------------------- 183
             +G VS  F     ++   + PN  ++T L                             
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLL 562

Query: 184 ------------------IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
                             I+ LC   R+ EA   F   +     P    Y ++I+  CR 
Sbjct: 563 EDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRL 622

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                AL L + M   +G       P+  +Y  II  LC+ G    AKE+F  +  +  N
Sbjct: 623 KILTDALTLLDSMTK-SGYL-----PHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESN 676

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            D + +  +I G        E   L   M + G QP     ++I  E+    ++ + +R
Sbjct: 677 YDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQEIAR 735


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 208/404 (51%), Gaps = 15/404 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+NIL   L      +    LF  + S    PD+ T+ ILI+ +C +G + +   +L 
Sbjct: 262 VCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLD 318

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKHRVFACEPDVFTYNTLINGLC 223
            ++     PNA  +TS++  LC + R+ +A  +      H+V     D   Y T+++G C
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL---DEAVYTTVLSGFC 375

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G  + A   F+EM             + VTY T+I+GLC+ G + +A+++  +M    
Sbjct: 376 NKGDLVSARRWFDEMQRKG------LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++ D VTYT ++ G+C      EA ++   M+ +GV P+VVT++ + D LCK G +  A+
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M  +G+  N  TYN+LI+G C    +D A +    M++ G   DV +Y TLI+  
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK+ +++ A  L  EML  GIKPT+VTYN L  G     +VE   KL + M   ++  + 
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNA 609

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            TYN+ +   C    +    E+++ +     E N  +YN LI G
Sbjct: 610 TTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 210/447 (46%), Gaps = 33/447 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD M     SPP V ++ IL          +  + L   + + G+ P+   ++ +
Sbjct: 280 DARQLFDEM----ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSV 335

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +   C  GRVS    V+  ++      +   +T+++ G C +  ++ A   F + +    
Sbjct: 336 VALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGL 395

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM---------------ANGNGEFGVVCK--- 250
             D  TY TLINGLCR G    A  + +EM                +G  + G + +   
Sbjct: 396 ATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQ 455

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTY  + DGLCK+G V  A EL  +M ++ +  +  TY S+I G C
Sbjct: 456 VHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 515

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A   ++A R   +M   G++PDV T++ ++D LCK+G++D+A  LL+ M+  G+ P   
Sbjct: 516 KAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIV 575

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TYN L++G+C++ +++  +KL   M       +  +YN+L+  YC   +++    +Y  M
Sbjct: 576 TYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
            S+ ++P   TYN L  G  +   ++ A    +EM          +Y+  I  L K    
Sbjct: 636 CSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKF 695

Query: 480 LEALELFRAIRDSKYELNIVSYNCLID 506
           +EA +LF  +R   +      YN  ID
Sbjct: 696 VEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 199/400 (49%), Gaps = 24/400 (6%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +SF++L  CL           L +R+   G+ P          C   + R+     +   
Sbjct: 208 ASFDLLLLCLPS-------APLLRRVRQYGISPSPEA------CNAVLSRLPLDEAI--E 252

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           + +     N  ++  L+K LC   R+ +A  LF +    A  PDV TY  LI+G C  G 
Sbjct: 253 LFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDE---MASPPDVVTYGILIHGYCALGE 309

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L ++M     E      PN   Y +++  LC +G V  A  +   M    +  D
Sbjct: 310 LENAVKLLDDMVARGVE------PNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILD 363

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
              YT+V+ GFC   D   A+R F EM  +G+  D VT++ +++ LC+ G++ +A ++L+
Sbjct: 364 EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQ 423

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M+ R ++ +  TY  L+DGYC   K+  A ++  +M   G   +VV+Y  L +  CK  
Sbjct: 424 EMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           DV+ A  L  EM +KG++    TYN+L  GL +   +++A++   +M    +  D YTY 
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ID LCKSG +  A +L + + D+  +  IV+YN L++G
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNG 583



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 189/413 (45%), Gaps = 46/413 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M R   +   V+ +  L   L +         + + + +  L  D  T+++L++ +C
Sbjct: 387 FDEMQRKGLATDGVT-YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K G+++  F V   +++    PN VT+T+L  GLC +  +  A  L  +      E +  
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYN+LINGLC+ G+   A+    +M           KP+  TY T+ID LCK G +D+A 
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAG------LKPDVYTYTTLIDALCKSGELDRAH 559

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L  +M D  I P +VTY  ++ GFC +      K+L   M+++ + P+  T++ +M + 
Sbjct: 560 DLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQY 619

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C    M   + + + M  R V PN  TYN LI G+C                        
Sbjct: 620 CIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHC------------------------ 655

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
                      K + ++EA   ++EM+ KG + T  +Y+ L   L +  +   A KLF +
Sbjct: 656 -----------KARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHD 704

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           MR+    A+   YN +ID      F  + LE   A+ D   E +IV     +D
Sbjct: 705 MRKEGFTAEPDVYNFYID----FNFNEDNLEATLALCDELVEASIVKSKAEMD 753



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 11/306 (3%)

Query: 205 VFACEPD--VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
           +F   PD  V +YN L+  LC  G    A  LF+EMA+          P+ VTY  +I G
Sbjct: 253 LFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---------PPDVVTYGILIHG 303

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            C  G ++ A +L   M    + P+   YTSV+   C     ++A  +  +M+   V  D
Sbjct: 304 YCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILD 363

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
              ++ ++   C  G +  A R  + M  +G+  +  TY TLI+G C   ++  A K+  
Sbjct: 364 EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQ 423

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M +     D V+Y  L++ YCK   + EA  +++ M+ +G+ P VVTY  L  GL +  
Sbjct: 424 EMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            V+ A +L  EM    +  +  TYN+ I+GLCK+G++ +A+     +  +  + ++ +Y 
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 503 CLIDGL 508
            LID L
Sbjct: 544 TLIDAL 549


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 182/350 (52%), Gaps = 6/350 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           +L+  +  +G  P IY  ++L++ FCK G V +  +V   I +    P  V+F +LI G 
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGC 293

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    + E   L          PDVFT++ LINGLC+ G       LF+EM       G+
Sbjct: 294 CKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR----GL 349

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           V  PN VT+ T+IDG CK G VD A + F  M  + + PD+VTY ++I G C   D  EA
Sbjct: 350 V--PNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           +RL  EM   G++PD +TF+ ++D  CK+G M+ A  +   M+  G+  +   +  LI G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   ++  A ++   M S G   D  +Y  +I+ +CK  DV+    L  EM S G  P 
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           VVTYN L  GL +  Q++ A  L D M    VA +  TYN  +DG  K G
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 175/335 (52%), Gaps = 8/335 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP +  FN+L     K         +F  +   GL P + + + LI+  CK G V  GF 
Sbjct: 245 PPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFR 304

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           + G +      P+  TF++LI GLC E R+ E + LF +       P+  T+ TLI+G C
Sbjct: 305 LKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQC 364

Query: 224 RTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           + G   +AL  F+ M A G        +P+ VTYN +I+GLCK G + +A+ L  +M   
Sbjct: 365 KGGKVDLALKNFQMMLAQG-------VRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD +T+T++I G C   D   A  +   M+++G++ D V F+ ++  LC+ G++  A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R+L  M+  G  P+  TY  +ID +C    +    KL   M+S+G +  VV+YN L+N 
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNG 537

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            CK   ++ A  L   ML+ G+ P  +TYN L  G
Sbjct: 538 LCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDG 572



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P ++ +N L++G C+ G    A  +F+E+           +P  V++NT+I G CK G V
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRG------LRPTVVSFNTLISGCCKSGDV 299

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++   L   M+ E + PDV T++++I G C     +E   LF EM  +G+ P+ VTF+ +
Sbjct: 300 EEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTL 359

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK GK+D A +  ++M+ +GV P+  TYN LI+G C    +  AR+L   M ++G 
Sbjct: 360 IDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGL 419

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D +++ TLI+  CK+ D+E AL +   M+ +GI+   V +  L  GL    +V  A +
Sbjct: 420 KPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGR 479

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +M       D  TY   ID  CK G V    +L + ++   +   +V+YN L++GL
Sbjct: 480 MLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGL 538



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 175/340 (51%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L S + P    F  L+ G C    +  A  +F +       P V ++NTLI+G C++G 
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGD 298

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L      G  E   VC P+  T++ +I+GLCKEG +D+   LF +M    + P+
Sbjct: 299 VEEGFRL-----KGVMESEGVC-PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPN 352

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VT+T++I G C     + A + F  M+ QGV+PD+VT++ +++ LCK G + +A RL+ 
Sbjct: 353 GVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 412

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+  T+ TLIDG C    ++ A ++   M   G   D V++  LI+  C+  
Sbjct: 413 EMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREG 472

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V +A  + ++MLS G KP   TY  +     +   V+   KL  EM+ +       TYN
Sbjct: 473 RVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYN 532

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++GLCK G +  A  L  A+ +     N ++YN L+DG
Sbjct: 533 ALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDG 572



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 170/331 (51%), Gaps = 11/331 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN L     K+   +    L   + S G+ PD++T S LIN  CK GR+  G ++
Sbjct: 281 PTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLL 340

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN VTFT+LI G C   ++  A   F         PD+ TYN LINGLC+
Sbjct: 341 FDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 400

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G    A  L  EM A+G        KP+ +T+ T+IDG CK+G ++ A E+  +M +E 
Sbjct: 401 VGDLKEARRLVNEMTASG-------LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEG 453

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I  D V +T++I G C     ++A R+  +M+  G +PD  T+++++D  CK G +    
Sbjct: 454 IELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGF 513

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +LL+ M   G  P   TYN L++G C   ++ +A+ L  +M + G   + ++YN L++ +
Sbjct: 514 KLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGH 573

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            K+    +     SE   KG+     +Y  L
Sbjct: 574 SKHGSSVDVDIFNSE---KGLVTDYASYTAL 601



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 140/240 (58%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++++  L+L++ D    P +  +  ++ GFC A D   A+ +F E+  +G++P VV+F+ 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK+G +++  RL  +M   GV P+ +T++ LI+G C   ++D    LF  M   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + + V++ TLI+  CK   V+ AL  +  ML++G++P +VTYN L  GL ++  ++ A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L +EM  + +  D  T+   IDG CK G +  ALE+ R + +   EL+ V++  LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 72/135 (53%)

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +I+ +  L++ +  +G    +  +N L++ +CK  DV  A  ++ E+  +G++PTVV++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G  +   VE   +L   M    V  D +T++  I+GLCK G + E   LF  +   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 493 KYELNIVSYNCLIDG 507
               N V++  LIDG
Sbjct: 348 GLVPNGVTFTTLIDG 362



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%)

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++E + +LY E+L  G  P +  +N L  G  +   V  A  +FDE+ +  +     ++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I G CKSG V E   L   +       ++ +++ LI+GL
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGL 328


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 214/404 (52%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S +IL     +N        LF ++   G  P I T+S LI  FCK G +  GF +
Sbjct: 410 PNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYL 469

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+ + ++ LI GLC +  + +A   F +       P+VFT NTL++  CR
Sbjct: 470 YEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCR 529

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A+ ++  M   N       K +TVTY  +I G  + G VD+A  LF +M  ++ 
Sbjct: 530 LKCIVGAMKVYYLMGMLN------IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDF 583

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TY ++I G C     +    +F  M    V PD+  ++V+++   + G ++ A  
Sbjct: 584 KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALG 643

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   ++ RG  P+ +T+NT+I  YC   ++D A +LF  M S     + +++  LI+ +C
Sbjct: 644 LFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFC 703

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV-ERALKLFDEMRRNHVAADT 463
           +   +++A+ ++S+ML +G +P +VTY+ L  G F+   + E  LKL++EM  N++A + 
Sbjct: 704 REGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNI 763

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +Y+  IDGLCK G + EA   FR   D     ++++Y  LI G
Sbjct: 764 VSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 200/397 (50%), Gaps = 6/397 (1%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           +L G L  +   + ++  +  L SA        +  ++N F   G V  G      +++ 
Sbjct: 207 LLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQG 266

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
            F  + +T   ++KG+  ++ I  A   F        +P+V T++TLI+  C+ G+   A
Sbjct: 267 GFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKA 326

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             LF+ MA GNG       P+ + Y+ +IDGL K G ++  + L L   D+ I  DVV +
Sbjct: 327 FVLFDVMA-GNG-----VTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGF 380

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           +S +  +    D     +++  M+++G+ P+VV+ S+++   C+NG++ +A  L   ++ 
Sbjct: 381 SSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILK 440

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G  P+  TY+ LI G+C +  +     L+  M    C  D + Y+ LIN  CK   V +
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           AL  + + +++G+ P V T NTL      +  +  A+K++  M   ++ ADT TY   I 
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G  + G V EAL LF  +    ++ ++++Y  LIDGL
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 164/344 (47%), Gaps = 12/344 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N L     + K     + ++  +    +  D  T++ILI    + GRV    ++
Sbjct: 515 PNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALML 574

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L+  F P+ +T+ +LI GLC   +      +F      A  PD+  YN LIN   R
Sbjct: 575 FFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSR 634

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            GH   AL LF  +           KP+  T+NT+I   C    +D A +LF KM  E +
Sbjct: 635 EGHLEAALGLFVHVVERGP------KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQL 688

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN-GKMDKAS 343
            P+ +T+T +I  FC     ++A  +F +M+++G +P++VT+S ++    K+   M+   
Sbjct: 689 RPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGL 748

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L   M+   + PN  +Y+ LIDG C    +  A   F        + DV++Y  LI  Y
Sbjct: 749 KLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           CK   + EA+ LY  ML   + P      TL     E +Q+++A
Sbjct: 809 CKVGRLTEAMMLYDNMLLNRLTPDRFLERTL-----EEYQLKKA 847



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 7/311 (2%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           Y++ M        ++ IL    A+    D  L LF ++      PD+ T+  LI+  CK+
Sbjct: 541 YLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKL 600

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            + S G  +   + ++   P+   +  LI     E  +  A  LF        +PDVFT+
Sbjct: 601 KKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTF 660

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           NT+I   C       A+ LF +M +         +PN +T+  +ID  C+EG +D A  +
Sbjct: 661 NTMICCYCNFKRLDDAVQLFAKMTSEQ------LRPNAITFTILIDAFCREGRMDDAMLM 714

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAK-RLFIEMMDQGVQPDVVTFSVIMDELC 334
           F KM +E   P++VTY+ +I G+  +    E+  +L+ EM++  + P++V++S+++D LC
Sbjct: 715 FSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLC 774

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G M +AS      + + + P+   Y  LI GYC   ++  A  L+ +M  N    D  
Sbjct: 775 KRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRF 834

Query: 395 SYNTLINWYCK 405
              TL  +  K
Sbjct: 835 LERTLEEYQLK 845



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 8/244 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G   L   +  LCIFD+M + +   P ++ +N+L    ++  H +  L LF  +   G  
Sbjct: 596 GLCKLKKSSAGLCIFDFMCK-NAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPK 654

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++T + +I C+C   R+     +  ++      PNA+TFT LI   C E R+ +A  +
Sbjct: 655 PDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLM 714

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           F+K      EP++ TY+ LI+G  ++   +   L L+ EM   N        PN V+Y+ 
Sbjct: 715 FSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENN------IAPNIVSYSI 768

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +IDGLCK G + +A   F    D+++ PDV+ YT +IRG+C      EA  L+  M+   
Sbjct: 769 LIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNR 828

Query: 319 VQPD 322
           + PD
Sbjct: 829 LTPD 832



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 35/291 (12%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLK--MKDENINPDVV-------------------- 289
           ++V Y  +I+  C++G  DK+ ++F+   +K   ++P+VV                    
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 290 -------------TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
                         Y  V+  F    +     R    ++  G   D++T + I+  +   
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
             +  A     +++  G  PN  T++TLID YC    +D A  LF  M  NG   D++ Y
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVY 345

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           + LI+   K   +E+   L    L KGIK  VV +++      +I  + R ++++  M  
Sbjct: 346 SILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLN 405

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++ +  + +  I G C++G +LEA  LF  I    +E +I++Y+ LI G
Sbjct: 406 EGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAG 456



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  ML   P P  V+   ++ G        ++ L L+  +    + P+I ++SI
Sbjct: 709 DDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSI 768

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G +          L     P+ + +T LI+G C   R+ EA  L+    +  
Sbjct: 769 LIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNR 828

Query: 208 CEPDVFTYNTL 218
             PD F   TL
Sbjct: 829 LTPDRFLERTL 839


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 208/412 (50%), Gaps = 19/412 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V +FN +   LA+ +    +  ++  +   A + PD+ T+ IL+N  CK GRV     VL
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 166 GRILRSCFT--PNAVTFTSLIKGLCAESRIMEAAALFTKHR---VFACEPDVFTYNTLIN 220
             + R      P+ VT  +++ GLC   R+ EA A F + R   V  C P+  TYN LI+
Sbjct: 196 DGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYNCLID 254

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
             CR G+  +A  L E+M N           N VT NTI+ GLC+ G    A E F + +
Sbjct: 255 AFCRVGNISMAYELVEKMENEG------VPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308

Query: 281 DENINPD----VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
              + P+     VTY++++    + N+   A  LF E M +G  PD + +  ++  L + 
Sbjct: 309 --TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+++ A  +   M   G   +T  YN LI G+C   ++  A +L   M+  G   DV +Y
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           NTL++  CK  D      L  +M+  G +P+V+T+ TL  G  ++ +++ AL++   M  
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  +   YN  ID LCK G V  A+ELF  +++     N+ ++N L+ GL
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL 538



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 201/406 (49%), Gaps = 21/406 (5%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLF-K 131
           CK+   GD        AL + D M R      P V + N +   L K+      L+   +
Sbjct: 183 CKAGRVGD--------ALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ 234

Query: 132 RLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           R++S  G  P+  T++ LI+ FC++G +S  + ++ ++       N VT  +++ GLC  
Sbjct: 235 RMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294

Query: 191 SRIMEAAALFTKHRVFACEP--DVFTYNTLINGLCRTGHTIVALNLF-EEMANGNGEFGV 247
            R   A   F + R    E   +  TY+TL+  L  T +  +A+ LF E+M+ G+     
Sbjct: 295 GRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH----- 349

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P+ + Y T+I GL + G ++ A  +   MK+     D   Y  +I GFC     +EA
Sbjct: 350 --SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L  EM + G++PDV T++ ++   CK G       LL  MI  G  P+  T+ TL+ G
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   KID A ++  SM+ +G   + V YNTLI++ CK  DV+ A+ L+ EM  K +   
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           V T+N L  GL + +  E+A +L D+MR      D  T +  ++ L
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ +F   +    SP  +  F ++ G L +    +   S+   +  AG   D   ++ILI
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISG-LTQAGRLEDACSMASSMKEAGFKLDTKAYNILI 395

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             FC+  R+   + +L  +      P+  T+ +L+ G C          L  K     C+
Sbjct: 396 AGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V T+ TL++G C+ G    AL +   M     E G+   PN V YNT+ID LCK G V
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSM----DESGI--HPNNVIYNTLIDFLCKRGDV 509

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A ELF +MK++++  +V T+ ++++G    N   +A  L  +M ++   PD VT  V+
Sbjct: 510 DLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVL 569

Query: 330 MDELCKNGKMDKASRLLE 347
           M+ L   G+ D+  R ++
Sbjct: 570 MEWLPVIGETDRLKRFMQ 587



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 7/229 (3%)

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           DV  + S++       D     R++  M     V+PDVVT+ ++++ LCK G++  A R+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 346 LELMIWR--GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES--NGCMHDVVSYNTLIN 401
           L+ M  +   + P+  T NT++DG C + ++  A        S  +GC  + V+YN LI+
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR--NHV 459
            +C+  ++  A  L  +M ++G+   +VT NT+  GL    +   AL+ F E R      
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  TY+  +  L  +  V  A+ELF       +  + + Y  +I GL
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGL 363


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 208/418 (49%), Gaps = 7/418 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +FD M++    P  V+ ++ L   L      D  L + + +   G+ P +YT+++ I
Sbjct: 252 AFGVFDRMVKEGCDPNSVT-YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C +        ++ R+ +    PN  T+T+LI GL    ++  A  L+ K       
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN LIN LC  G    AL +F  M  G+G        NT TYN II GLC  G +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDI 424

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +KA  LF KM      P VVTY ++I G+    + N A RL   M + G +PD  T++ +
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    K GK++ AS   + M+  G+NPN  +Y  LIDG+    K+D A  L   ME  GC
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +V SYN +IN   K     EA  +  +M+ +G+ P V+TY TL  GL    + + A K
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +F +M +     + YTY++ I GLC+ G   EA  L + +       + V++  LIDG
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 6/382 (1%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           V      ++  G    +Y+ + L+    K   V     +  ++L S   P+ +TF +LI 
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
            L  + ++ EA  + ++   +   PDVFTY +LI G CR  +  +A  +F+ M       
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--- 263

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
              C PN+VTY+T+I+GLC EG VD+A ++  +M ++ I P V TYT  I   C      
Sbjct: 264 ---CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  L   M  +G +P+V T++ ++  L + GK++ A  L   M+  G+ PNT TYN LI
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +  C+  +   A K+F  ME +G + +  +YN +I   C   D+E+A+ L+ +ML  G  
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           PTVVTYNTL  G      V  A +L D M+ N    D +TYN  + G  K G +  A   
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
           F+ + +     N VSY  LIDG
Sbjct: 501 FQEMVECGLNPNPVSYTALIDG 522



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S N L   LAK +  +   +L+K++ ++G+ P + T + LIN   K G+V    ++L +I
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +   +P+  T+TSLI G C    +  A  +F +     C+P+  TY+TLINGLC  G  
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ EEM     E G+  +P   TY   I  LC     ++A EL  +MK     P+V
Sbjct: 285 DEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT++I G         A  L+ +M+ +G+ P+ VT++ +++ELC  G+   A ++   
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G   NT TYN +I G CL   I+ A  LF  M   G +  VV+YNTLIN Y    +
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V  A  L   M   G +P   TYN L  G  +  ++E A   F EM    +  +  +Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            IDG  K G V  AL L + + +     N+ SYN +I+GL
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 210/421 (49%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + + M+      P V ++ +    L   +H +  + L  R+   G  P++ T++ 
Sbjct: 285 DEALDMLEEMIE-KGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTA 343

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   ++G++     +  ++L+    PN VT+ +LI  LC   R   A  +F       
Sbjct: 344 LISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHG 403

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +  TYN +I GLC  G    A+ LFE+M     + G +  P  VTYNT+I+G   +G
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKML----KMGPL--PTVVTYNTLINGYLTKG 457

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A  L   MK+    PD  TY  ++ GF        A   F EM++ G+ P+ V+++
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K+GK+D A  LL+ M   G NPN  +YN +I+G    ++   A K+   M   
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + +V++Y TLI+  C+N   + A  ++ +M  +   P + TY++L  GL +  + + A
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L  EM R  +A D  T+ + IDG    G +  A  L R + D   + N  +Y+ L+ G
Sbjct: 638 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697

Query: 508 L 508
           L
Sbjct: 698 L 698



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 185/377 (49%), Gaps = 6/377 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L++    +  + L+ ++   GL P+  T++ LIN  C  GR S    +
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N  T+  +IKGLC    I +A  LF K       P V TYNTLING   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  L + M   NG     C+P+  TYN ++ G  K G ++ A   F +M +  +
Sbjct: 456 KGNVNNAARLLDLMKE-NG-----CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NP+ V+YT++I G       + A  L   M + G  P+V +++ +++ L K  +  +A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M+ +G+ PN  TY TLIDG C   +   A K+F  ME   C+ ++ +Y++LI   C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    +EA  L  EM  KG+ P  VT+ +L  G   + +++ A  L   M       +  
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 465 TYNNFIDGLCKSGFVLE 481
           TY+  + GL K   +LE
Sbjct: 690 TYSVLLKGLQKECLLLE 706



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%)

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           E+   G    + + + ++ +L K   ++ A  L + M+  G+ P+  T+NTLI+      
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K+  A  +   +       DV +Y +LI  +C+N++++ A  ++  M+ +G  P  VTY+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  GL    +V+ AL + +EM    +    YTY   I  LC      EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 493 KYELNIVSYNCLIDGL 508
               N+ +Y  LI GL
Sbjct: 333 GCRPNVQTYTALISGL 348



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 404 CKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           C+N++ +       +E+   G   ++ + NTL + L +   VE A  L+ +M  + +   
Sbjct: 138 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             T+N  I+ L K G V EA  +   I       ++ +Y  LI G
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + + +   L + + +   L LF  + S+GL PD+Y ++ ++   C++        V
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +GR+  S    +  T+   I+GLC   R+ EA  +           DV TY TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +      EEM N   EFG V  P+    + ++DGL K+G +  A +L  K+K   +
Sbjct: 298 ----VEEFEAGEEMMNEMIEFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +  Y ++I   C     +EA+ LF  M  +G+ P+ VT+S+++D  CK GK+D A  
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M   G+    Y Y++LI G+C   K+  A+ LF  M +NG   +VV Y +LI+ YC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  ++  A  LY EM  KGI P   T+  L  GL   +++  A KLF EM   +V  +  
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I+G CK G  + A EL   + +     +  +Y  LI GL
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 207/408 (50%), Gaps = 11/408 (2%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           PS   VS+   L   L K  +  +   L  ++   G+ P ++ ++ LIN  CK G++   
Sbjct: 318 PSEAAVSN---LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +   +      PN VT++ LI   C   ++  A     K      +  V+ Y++LI+G
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434

Query: 222 LCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            C+ G    A +LF+EM ANG        KPN V Y ++I G CKEG +  A  L+ +M 
Sbjct: 435 HCKLGKLRAAKSLFDEMIANG-------LKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            + I+P+  T+T++I G C+AN   EA +LF EM++  V P+ VT++V+++  CK G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  LL+ M+ +G+ P+TYTY  LI G C T ++  AR+    ++      + + ++ L+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           + YCK   +++AL    EML +G+   +V Y+ L  G+         + L  +M    + 
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D   Y   ID   K+G +  A  L+  +       N+V+Y  LI+GL
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGL 715



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 198/378 (52%), Gaps = 7/378 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           SLF  + + GL P++  ++ LI+ +CK G + + F +   +     +PN  TFT+LI GL
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C  +R+ EA  LF +   +   P+  TYN LI G C+ G+T+ A  L +EM     E G+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGL 561

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           V  P+T TY  +I GLC  G V +A+E    ++ E    + + +++++ G+C     ++A
Sbjct: 562 V--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
                EM+ +GV  D+V +SV++  + +         LL+ M  +G+ P+   Y T+ID 
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                 +  A  L+  M S GC+ +VV+Y  LIN  CK   +++A  L  EML+    P 
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             TY      L     +E+A++L D +    + A+T TYN  I G CK G + EA E+  
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTVTYNILIRGFCKLGRIQEAAEVLV 798

Query: 488 AIRDSKYELNIVSYNCLI 505
            + DS    + +SY+ +I
Sbjct: 799 NMIDSGISPDCISYSTII 816



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 193/386 (50%), Gaps = 8/386 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M+  +  P  V+ +N+L     K  +      L   +   GL PD YT+  L
Sbjct: 513 EANKLFGEMVEWNVIPNEVT-YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  GRVS     +  +       N + F++L+ G C E R+ +A     +      
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D+  Y+ LI G+ R       ++L ++M +         +P+ V Y T+ID   K G 
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG------LRPDNVLYTTMIDANAKAGN 685

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A  L+  M  E   P+VVTYT++I G C     ++A+ L  EM+     P+  T++ 
Sbjct: 686 LKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 745

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L   G ++KA +L ++++  G   NT TYN LI G+C   +I  A ++ V+M  +G
Sbjct: 746 FLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 804

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D +SY+T+I  YC+  D++EA+ L+  ML++G+ P  V YN L  G     ++ +A 
Sbjct: 805 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 864

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLC 474
           +L D+M R  V  +  TYN+ I G C
Sbjct: 865 ELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 144/266 (54%), Gaps = 9/266 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +++L   + + +   +++ L K+++  GL PD   ++ +I+   K G +   F +   ++
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE-PDVFTYNTLINGLCRTGHT 228
                PN VT+T+LI GLC +  +M+ A L  +  + +   P+  TY   ++ L   G+ 
Sbjct: 698 SEGCLPNVVTYTALINGLC-KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L + +  G          NTVTYN +I G CK G + +A E+ + M D  I+PD 
Sbjct: 757 EKAIQLHDVLLEG-------FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 809

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           ++Y+++I  +C   D  EA +L+  M+++GV PD V ++ ++   C  G++ KA  L + 
Sbjct: 810 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 869

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKI 374
           M+ RGV PN  TYN+LI G CL   +
Sbjct: 870 MMRRGVKPNRATYNSLIHGTCLMSSV 895



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 98/195 (50%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           MMD G+ P + T S +++ L +  +   A  L + ++  G+ P+ Y Y  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              AR++   MES+GC   V +YN  I   CKN+ V EA+ + + +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L LGL ++ + E   ++ +EM            +N +DGL K G +  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 494 YELNIVSYNCLIDGL 508
              ++  YN LI+ +
Sbjct: 351 VAPSLFVYNALINSM 365



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 109/228 (47%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M D  I P + T + V+ G      +  A  LF E++  G++PDV  ++ ++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
             +A  ++  M   G + +  TYN  I G C   ++  A ++   +   G   DV +Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           L+   CK ++ E    + +EM+  G  P+    + L  GL +   +  A  L +++++  
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           VA   + YN  I+ +CK G + EA  LF  +       N V+Y+ LID
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + ++ LI  Y +N+   + L +   M+  GI P + T + +  GL  I Q   AL LFDE
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  + +  D Y Y   +  LC+    + A E+   +  S  +L++ +YN  I GL
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGL 260



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +   M+    SP  +S   I++    +       + L++ + + G+ PD   ++ 
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYE-YCRRGDLKEAIKLWESMLNRGVNPDTVAYNF 849

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           LI   C  G ++  F +   ++R    PN  T+ SLI G C  S +   A
Sbjct: 850 LIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTA 899


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 209/421 (49%), Gaps = 9/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +    L    +P  V  +N L     K  +    L +   + S G+ P+  T + 
Sbjct: 333 NEANSVLKETLEKGFTPNEVV-YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I  FCK+G++     +L  +L   F+ N   FT++I  LC  SR   A     +  +  
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             P+     TL+ GLC+ G    A+ L F  +  G G        N VT N +I GLCK 
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA-------NLVTTNALIHGLCKT 504

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G + +A  L  KM +     D +TY ++I G C      E  +L  EM+ QG++PD  T+
Sbjct: 505 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 564

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++  +C+ GK+D+A  L      R + PN YTY  +IDGYC  DKI+   KLF  + +
Sbjct: 565 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                + V YNTLI  YC+N +  EA  L+ +M SKGI PT  TY++L  G+  I ++E 
Sbjct: 625 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 684

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  L DEMR+  +  +   Y   I G CK G + + + + + +       N ++Y  +ID
Sbjct: 685 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 744

Query: 507 G 507
           G
Sbjct: 745 G 745



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 210/429 (48%), Gaps = 7/429 (1%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG   +    +A CI + ML    S  P  +F  +   L  N  +++ L   + +    +
Sbjct: 394 QGFCKIGQMEQAECILEEMLSRGFSINP-GAFTTIIHWLCMNSRFESALRFLREMLLRNM 452

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+    + L+   CK G+ S    +  R+L   F  N VT  +LI GLC    + EA  
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L  K        D  TYNTLI+G C+ G       L  EM     E      P+T TYN 
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE------PDTFTYNL 566

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G+C+ G +D+A  L+ + K  ++ P+V TY  +I G+C A+   E ++LF E++ Q 
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++ + V ++ ++   C+NG   +A +L + M  +G+ P T TY++LI G C   +++ A+
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 686

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L   M   G + +VV Y  LI  YCK   +++ +++  EM S  I P  +TY  +  G 
Sbjct: 687 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 746

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +   ++ A KL  EM    +  DT TYN   +G CK G + E  ++   +      L+ 
Sbjct: 747 SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDE 806

Query: 499 VSYNCLIDG 507
           ++Y  L+ G
Sbjct: 807 ITYTTLVHG 815



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 198/401 (49%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  F+       K    +  + LF  +   G+ P++ T++ LI+  CK G +   F  
Sbjct: 244 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF 303

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++       +T++ LI GL    +  EA ++  +       P+   YNTLI+G C+
Sbjct: 304 KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 363

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL +  +M +          PN+VT N+II G CK G +++A+ +  +M     
Sbjct: 364 MGNLGDALRIRGDMVSKG------INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + +   +T++I   C  + +  A R   EM+ + ++P+    + ++  LCK GK   A  
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 477

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   ++ +G   N  T N LI G C T  +  A +L   M   G + D ++YNTLI+  C
Sbjct: 478 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC 537

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VEE   L  EM+ +GI+P   TYN L  G+  I +++ A+ L++E +   +  + Y
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY   IDG CK+  + E  +LF  +     ELN V YN LI
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 638



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  M ++  SP  V+  N++ G L K+ + D      +++   G+   + T+S+L
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHG-LCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 322

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN   K+ + +    VL   L   FTPN V + +LI G C    + +A  +         
Sbjct: 323 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T N++I G C+ G    A  + EEM +    F +    N   + TII  LC    
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG--FSI----NPGAFTTIIHWLCMNSR 436

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            + A     +M   N+ P+    T+++ G C     ++A  L+  ++++G   ++VT + 
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK G M +A RLL+ M+ RG   +  TYNTLI G C   K++   KL   M   G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D  +YN LI+  C+   ++EA++L++E  S+ + P V TY  +  G  +  ++E   
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KLF E+   ++  ++  YN  I   C++G  +EA +L   +R         +Y+ LI G+
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 200/400 (50%), Gaps = 13/400 (3%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFP-DIYTHSILINCFCKMGR---VSHGFVVLGR 167
           +LFG   KN+H + + S    LN  G     +    +LI+ +C   R     +   V   
Sbjct: 145 VLFGD-PKNRHIE-IASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRF 202

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +      P   T T L+  L   + + ++  +F   R     PDV+ ++T IN  C+ G 
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGK 261

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ LF +M     + GV   PN VTYN +I GLCK G +D+A     KM  + +N  
Sbjct: 262 VEDAIQLFFDME----KLGV--SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           ++TY+ +I G      +NEA  +  E +++G  P+ V ++ ++D  CK G +  A R+  
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M+ +G+NPN+ T N++I G+C   +++ A  +   M S G   +  ++ T+I+W C N 
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
             E AL    EML + ++P      TL  GL +  +   A++L+  +      A+  T N
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             I GLCK+G + EA+ L + + +  + L+ ++YN LI G
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V T   L++ L +      +  +FE M  G         P+   ++T I+  CK G V
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQG-------VSPDVYLFSTAINAFCKGGKV 262

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A +LF  M+   ++P+VVTY ++I G C   + +EA R   +M+  GV   ++T+SV+
Sbjct: 263 EDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 322

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ L K  K ++A+ +L+  + +G  PN   YNTLIDGYC    +  A ++   M S G 
Sbjct: 323 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V+ N++I  +CK   +E+A  +  EMLS+G       + T+   L    + E AL+
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EM   ++  +       + GLCK G   +A+EL+  + +  +  N+V+ N LI GL
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 139/264 (52%), Gaps = 6/264 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N+L   + +    D  ++L+    S  L P++YT+ ++I+ +CK  ++  G  +
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L      N+V + +LI+  C     +EA  L    R     P   TY++LI+G+C 
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCN 678

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM     + G++  PN V Y  +I G CK G +DK   +  +M   +I
Sbjct: 679 IGRMEDAKCLIDEMR----KEGLL--PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+ +TYT +I G+  + D   A +L  EM+ +G+ PD VT++V+ +  CK GK+++  +
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792

Query: 345 LLELMIWRGVNPNTYTYNTLIDGY 368
           + + M   G+  +  TY TL+ G+
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGW 816


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 220/420 (52%), Gaps = 9/420 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            + L +   M R   +P  V+ +N+L   L+K   ++    L   +   GL    YT++ 
Sbjct: 251 QQGLDLLSEMQRRGCAPNDVT-YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +   G ++    +   ++    +P   T+ S I GLC   R+ +A    +      
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +YNTLI G CR G+ + A  LF+E+ +      +   P  VTYNT++DGLC++G
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS------IYLFPTIVTYNTLLDGLCRQG 423

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A++L ++M +E I PD+VTYT ++ G C     + A+  F EM+ +G++ D   ++
Sbjct: 424 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 483

Query: 328 V-IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             I+ EL K G   +A  L E M+ +G  P+   YN ++DG C    ++ A +L   M S
Sbjct: 484 TRIVGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G + D V+Y ++I+ + +N  + +   ++ EMLSKG+ P+VVTY  L  G     ++ER
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A   F EM+   +  +  TYN+ I+GLCK   + +A   F  + +     N  SY  LI+
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 178/362 (49%), Gaps = 6/362 (1%)

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI  + K   V     V  ++++S  +P+      +++ L  +  + +A  ++     F
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +P + TYNTL++  C+ G     L+L  EM          C PN VTYN +I+GL K+
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSKK 282

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  ++AK L  +M    +     TY  +I G+       EA  L  EM+ +G  P V T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +  +  LCK G+M  A + L  M+   + P+  +YNTLI GYC    +  A  LF  + S
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                 +V+YNTL++  C+  ++E A  L  EM+++GI P +VTY  L  G  ++  +  
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A + FDEM    +  D+Y Y   I G  K G    A  L   +    +  +++ YN ++D
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 507 GL 508
           GL
Sbjct: 523 GL 524



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 6/213 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           SL + + + G  PD+  ++++++  CK+G +     +L +++     P+ VT+TS+I   
Sbjct: 500 SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH 559

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
               R+ +   +F +       P V TY  LI+G    G    A   F EM     E G+
Sbjct: 560 LENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ----EKGI 615

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +  PN +TYN++I+GLCK   +D+A   F +M ++ I P+  +YT +I   C   +W EA
Sbjct: 616 L--PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEA 673

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
             L+ +M+D+GVQPD  T S ++ +L K+ K+ 
Sbjct: 674 LSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 46/89 (51%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K +  D   + F  +   G+FP+ Y+++ILIN  C MG       +
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRI 193
             ++L     P++ T ++L+K L  + ++
Sbjct: 677 YKQMLDRGVQPDSCTHSALLKQLGKDCKL 705


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 215/431 (49%), Gaps = 17/431 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N    +F  M+++       +  ++L G LA+  +++ +  L +++    + P++ T  I
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTG-LAREGNFNRMNELMEKMVEMDIQPNVVTFGI 345

Query: 148 LINCFCKMGRVSHGFVVLGRI--------LRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           LIN  CK  RV     VL ++        +     P+ V + +LI GLC   R  E   L
Sbjct: 346 LINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGL 405

Query: 200 FTKHRVF-ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
             + R    C PD  TYN LI+G C+ G       LF+EM   N E GV   PN VT NT
Sbjct: 406 MERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM---NKE-GVA--PNVVTVNT 459

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++ G+C+ G V  A   F++ +   +  D VTYT++I  FC  N++ +A  LF EM+  G
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD + +  ++    + G+M  AS +L  +   G+ P+T  YNTLI G+C T+K     
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVF 579

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           ++   ME  G   D ++YNTLI +  KN D++ A  +  +M+  G+ PTV TY  +    
Sbjct: 580 EMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAY 639

Query: 439 FEIHQVERALKLFDEMRR-NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
                   A+++F +M+  + V  +T  YN  I+ LCK+  V  A+ L   ++      N
Sbjct: 640 CLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPN 699

Query: 498 IVSYNCLIDGL 508
             +YN +  GL
Sbjct: 700 TTTYNAIFKGL 710



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 185/386 (47%), Gaps = 9/386 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHGFV 163
           P V  +N L   L K       L L +R+ S  G  PD  T++ LI+ FCK G +  G  
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   + +    PN VT  +L+ G+C   R+  A   F + +    + D  TY  LIN  C
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
              +   A+ LF EM          C P+ + Y T+I G  + G +  A  +  ++K   
Sbjct: 501 NVNNFEKAMELFNEMLKSG------CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD V Y ++I GFC  N ++    +  EM + G++PD +T++ ++    KNG +  A 
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINW 402
           +++  MI  GV P   TY  +I+ YCL    + A ++F  M++   +  + V YN LIN 
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CKN  V+ A+SL  +M   G+ P   TYN +F GL +   +E+  +  D M  +    D
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPD 734

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRA 488
             T     + L   G + E L+ F A
Sbjct: 735 YITMEILTEWLSAVGEI-ERLKKFVA 759



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 12/431 (2%)

Query: 89  EALCIFDYMLRMHPSP---PPVSSFNILFGCLAKNKH------YDTVLSLFKRLNSAGLF 139
           +AL + D M   +      P  ++ +ILF  L K +        D +++L  +    G+ 
Sbjct: 208 DALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVL 267

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
              +    LI   C+  + + G+ +   +++      +    SL+ GL  E        L
Sbjct: 268 ISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNEL 327

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKPNTVTYN 257
             K      +P+V T+  LIN +C+      AL + E+M+ G  +G   V  +P+ V YN
Sbjct: 328 MEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYN 387

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           T+IDGLCK G   +   L  +M+ +    PD +TY  +I GFC A +  + K LF EM  
Sbjct: 388 TLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNK 447

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +GV P+VVT + ++  +C+ G++  A         RG+  +  TY  LI+ +C  +  + 
Sbjct: 448 EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEK 507

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A +LF  M  +GC  D + Y TLI+ + +   + +A  + +E+   GI+P  V YNTL  
Sbjct: 508 AMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIG 567

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G    ++  R  ++  EM    +  DT TYN  I    K+G +  A ++ R +  +    
Sbjct: 568 GFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627

Query: 497 NIVSYNCLIDG 507
            + +Y  +I+ 
Sbjct: 628 TVATYGAVINA 638



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 162/363 (44%), Gaps = 7/363 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            E L + + M       P   ++N L     K    +    LF  +N  G+ P++ T + 
Sbjct: 400 QEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNT 459

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   C+ GRVS          R     +AVT+T+LI   C  +   +A  LF +     
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD   Y TLI+G  + G    A  +  E+     + G+  +P+TV YNT+I G C+  
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELK----KLGI--RPDTVCYNTLIGGFCRTN 573

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +  E+  +M++  + PD +TY ++I       D   A+++  +M+  GV P V T+ 
Sbjct: 574 KFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYG 633

Query: 328 VIMDELCKNGKMDKASRLLELM-IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +++  C NG  ++A  + + M     V PNT  YN LI+  C  +K+  A  L   M+ 
Sbjct: 634 AVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKI 693

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   +  +YN +       KD+E+       M+     P  +T   L   L  + ++ER
Sbjct: 694 WGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753

Query: 447 ALK 449
             K
Sbjct: 754 LKK 756



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 10/260 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT--VLSLFKRLNSAGLFPDIYTHS 146
           +A+ +F+ ML+   SP  +  + ++ G     +  D   VL+  K+L   G+ PD   ++
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKL---GIRPDTVCYN 563

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI  FC+  +    F +L  +  +   P+ +T+ +LI        +  A  +  K    
Sbjct: 564 TLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA 623

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P V TY  +IN  C  G+   A+ +F++M   +        PNTV YN +I+ LCK 
Sbjct: 624 GVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK-----VPPNTVIYNILINSLCKN 678

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             V  A  L   MK   + P+  TY ++ +G     D  +       M++    PD +T 
Sbjct: 679 NKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITM 738

Query: 327 SVIMDELCKNGKMDKASRLL 346
            ++ + L   G++++  + +
Sbjct: 739 EILTEWLSAVGEIERLKKFV 758


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 221/473 (46%), Gaps = 76/473 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +++++   L +    D  L L + + + GL PD Y ++ LI+ FC+  R + G  +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324

Query: 165 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 189
           L  +      P+ V +T+LI G                                   LC 
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLI------------------------------ 219
              + +A  LF++  +   +PD+ TYN LI                              
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444

Query: 220 -----NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
                NGLC  G    A  LF+EM +    +G+  KPN V Y TI+ GL KEG  ++A +
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMIS----WGL--KPNIVIYTTIVKGLVKEGRFEEAIK 498

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           +   MKD+ ++PDV  Y +VI GFC A    E K   +EM+ +G++P+V T+   +   C
Sbjct: 499 ILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           + G+M  A R    M+  G+ PN      LIDGYC       A   F  M   G + DV 
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +++ LI+   KN  ++EA+ ++SE+L KG+ P V TY +L   L +   ++ A +L D+M
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDM 678

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  +  +  TYN  I+GLCK G + +A ELF  I +     N V+Y+ +I G
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 198/379 (52%), Gaps = 6/379 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF  +   G+ PDI T++ LI  + K+  +   + +L  I +   T NA    +++ GLC
Sbjct: 394 LFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLC 453

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               +  A  LF +   +  +P++  Y T++ GL + G    A+ +   M +        
Sbjct: 454 HCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG------ 507

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P+   YNT+I G CK G +++ K   ++M  + + P+V TY + I G+C A +   A+
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           R FIEM+D G+ P+ V  + ++D  CK+G   KA      M+ +GV P+  T++ LI G 
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
               K+  A  +F  +   G + DV +Y +LI+  CK  D++ A  L+ +M  KGI P +
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTYN L  GL ++ ++ +A +LFD +    +A ++ TY+  I G CKS  + EA +LF  
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 489 IRDSKYELNIVSYNCLIDG 507
           ++      +   Y  LIDG
Sbjct: 748 MKLVGVPPDSFVYCALIDG 766



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 201/411 (48%), Gaps = 9/411 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           + M    P + ++N L     K ++ +    L   +    L  + Y    ++N  C  G 
Sbjct: 398 MTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           ++    +   ++     PN V +T+++KGL  E R  EA  +    +     PDVF YNT
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517

Query: 218 LINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +I G C+ G      + L E +A G        KPN  TY   I G C+ G +  A+  F
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKG-------LKPNVYTYGAFIHGYCRAGEMQAAERSF 570

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
           ++M D  I P+ V  T +I G+C   +  +A   F  M+DQGV PDV T SV++  L KN
Sbjct: 571 IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           GK+ +A  +   ++ +G+ P+ +TY +LI   C    +  A +L   M   G   ++V+Y
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N LIN  CK  ++ +A  L+  +  KG+    VTY+T+  G  +   +  A +LF  M+ 
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             V  D++ Y   IDG CK+G   +AL LF  + +     +  ++N LIDG
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDG 800



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 201/414 (48%), Gaps = 42/414 (10%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF+ + S GL P+I  ++ ++    K GR      +LG +     +P+   + ++I G C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              ++ E  +   +      +P+V+TY   I+G CR G    A   F EM +     G+ 
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS----GIA 579

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             PN V    +IDG CK+G   KA   F  M D+ + PDV T++ +I G        EA 
Sbjct: 580 --PNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +F E++D+G+ PDV T++ ++  LCK G +  A  L + M  +G+NPN  TYN LI+G 
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV------------------- 409
           C   +I  AR+LF  +   G   + V+Y+T+I  YCK+ ++                   
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757

Query: 410 ----------------EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
                           E+ALSL+  M+ +GI  T   +N L  G F++ ++  A +L ++
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLIEAYQLVED 816

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           M  NH+  +  TY   I+  C  G + EA +LF  ++      N+++Y  L+ G
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 207/412 (50%), Gaps = 8/412 (1%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F  ML    +P  V   +++ G   K+ +     + F+ +   G+ PD+ THS+LI+   
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDG-YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K G++     V   +L     P+  T+TSLI  LC E  +  A  L          P++ 
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYN LINGLC+ G    A  LF+    G  E G+    N+VTY+TII G CK   + +A 
Sbjct: 689 TYNALINGLCKLGEIAKARELFD----GIPEKGLA--RNSVTYSTIIAGYCKSANLTEAF 742

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +LF  MK   + PD   Y ++I G C A +  +A  LF+ M+++G+      F+ ++D  
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGF 801

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K GK+ +A +L+E M+   + PN  TY  LI+ +C    I  A +LF+ M+    M +V
Sbjct: 802 FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNV 861

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y +L++ Y +     E  SL+ EM+++GIKP  + ++ +     +     +ALKL D+
Sbjct: 862 LTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDD 921

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           M    V      Y   ID LCK   + E L++   +     +L++ +   L+
Sbjct: 922 MLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV 973



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 164/335 (48%), Gaps = 6/335 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+  T+T+LI   C   ++ E   +        C P++ TY+ +I GLCR G    AL
Sbjct: 228 IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEAL 287

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L   MAN     G++  P+   Y T+IDG C++    + K +  +M    + PD V YT
Sbjct: 288 ELKRSMANK----GLL--PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I GF   +D   A ++  EM  + ++ +  T+  ++  LCK G ++KA  L   M   
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  TYN LI+GY     ++ A +L + ++      +      ++N  C   D+  A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+ EM+S G+KP +V Y T+  GL +  + E A+K+   M+   ++ D + YN  I G
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            CK+G + E       +     + N+ +Y   I G
Sbjct: 522 FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 7/388 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + ++L   L+KN      + +F  L   GL PD++T++ LI+  CK G +   F +
Sbjct: 615 PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFEL 674

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    PN VT+ +LI GLC    I +A  LF          +  TY+T+I G C+
Sbjct: 675 HDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCK 734

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           + +   A  LF  M        V   P++  Y  +IDG CK G  +KA  LFL M +E I
Sbjct: 735 SANLTEAFQLFHGMKL------VGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                 + ++I GF       EA +L  +M+D  + P+ VT++++++  C  G + +A +
Sbjct: 789 -ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M  R V PN  TY +L+ GY    +      LF  M + G   D ++++ +++ + 
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +  +AL L  +MLS+G+      Y  L   L + + +   LK+ DE+ +        
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDS 492
           T    +    ++G   EAL +  ++  S
Sbjct: 968 TCGTLVCCFHRAGRTDEALRVLESMVRS 995



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 213/438 (48%), Gaps = 30/438 (6%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYD--TVLSLFKRLNSAGLF-PDIYTHSILIN 150
           + +++   P P  ++  +++F  + +N+  D   +   F  +NS  +F  ++ T SIL  
Sbjct: 57  WQFLIESSPLPNKLNP-DVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSL 115

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             C  G   +   VL R++ +   P+     S+IK  C +   +  ++  +   VF    
Sbjct: 116 ILCNSGLFGNAANVLERMIDT-RNPHVKILDSIIK--CYKE--INGSSSSSSVVVFEILI 170

Query: 211 DVFTYNTLINGL------CRTGHTIVAL----NLFEEMANGN----------GEFGVVCK 250
           D++     +N         +T   IV L    +L +++  GN          G  G +  
Sbjct: 171 DIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIV- 229

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+  TY  +I+  C+ G V++ K +   M+++   P++VTY+ VI G C A D +EA  L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
              M ++G+ PD   ++ ++D  C+  +  +   +L+ M   G+ P+   Y  LI+G+  
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
              I  A ++   M +     +  +Y  LI+  CK  D+E+A  L+SEM   GIKP + T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YN L  G +++  +E+A +L  E+++ ++ A+ Y     ++GLC  G +  A ELF+ + 
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 491 DSKYELNIVSYNCLIDGL 508
               + NIV Y  ++ GL
Sbjct: 470 SWGLKPNIVIYTTIVKGL 487


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 212/406 (52%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N++   L K    D  +  F+ +      PD++T+S L+N  CK  RV     +
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN VTF  LI  L     +  AA L     +  C P+  TYNTLI+GLC 
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+L E+M +        C PN VTY TII+GL K+   +    + + M++   
Sbjct: 316 KGKLDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +   Y+S+I G         A RL+ EM ++G +P+VV +   +D LC++ K D+A  
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 429

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ M+ +G  PN +TY++L+ G+        A  ++  M S    H+VV  + L+N  C
Sbjct: 430 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 489

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA--D 462
           ++  + EAL++++ ML +G+KP VV Y+++  GL ++  V++ LKLF EM+     +  D
Sbjct: 490 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 549

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN   + LC+   +  A++L  ++ D   + + ++ N  ++ L
Sbjct: 550 VVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 179/337 (53%), Gaps = 8/337 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F PN +T+  +IK LC   +I  A   F +  +  C PDVFTY+TL+NGLC+      A+
Sbjct: 194 FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 253

Query: 233 NLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            L +EM A G       C PN VT+N +ID L K G + +A +L   M  +   P+ VTY
Sbjct: 254 FLLDEMQAEG-------CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTY 306

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I G C     ++A  L  +M+     P+ VT+  I++ L K  + +    +L  M  
Sbjct: 307 NTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 366

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           RG   N Y Y++LI G     K ++A +L+  M   GC  +VV Y   I+  C+++  +E
Sbjct: 367 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 426

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  +  EMLSKG  P   TY++L  G F+    ++A+ ++ EM    +  +    +  ++
Sbjct: 427 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 486

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLC+SG + EAL ++  +     + ++V+Y+ +I GL
Sbjct: 487 GLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 523



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 183/347 (52%), Gaps = 8/347 (2%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV---FACEPDVFTYNTLIN 220
           VL R+ R         F  + K  C ++ +   A  F  HR+     C+  V ++N+++N
Sbjct: 111 VLDRMKREGRVLTETIFILIFKA-CGKAHLPGEAVNFF-HRMANDLHCKQTVKSFNSVLN 168

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            + + G    A   +  +   N + G   +PN +TYN II  LCK G +D+A + F +M 
Sbjct: 169 VIIQEGDFSYAFKFYLHVFGANSK-GF--QPNLLTYNLIIKALCKLGQIDRAVDTFREMP 225

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +N NPDV TY++++ G C     +EA  L  EM  +G  P+ VTF+V++D L KNG + 
Sbjct: 226 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 285

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A++L++ M  +G  PN  TYNTLI G CL  K+D A  L   M S+ C+ + V+Y T+I
Sbjct: 286 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 345

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N   K +  E+ + +   M  +G K     Y++L  GLF+  + E A++L+ EM      
Sbjct: 346 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 405

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   Y  FIDGLC+     EA ++ + +    +  N  +Y+ L+ G
Sbjct: 406 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 452



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 208/420 (49%), Gaps = 30/420 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M      P PV+ FN+L   L+KN        L   +   G  P+  T++ 
Sbjct: 250 DEAVFLLDEMQAEGCLPNPVT-FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 308

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  G++     +L +++ S   PN VT+ ++I GL  + R  +   +        
Sbjct: 309 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 368

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + + + Y++LI+GL + G +  A+ L++EMA         CKPN V Y   IDGLC++ 
Sbjct: 369 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG------CKPNVVVYGAFIDGLCRDE 422

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+++  +M  +   P+  TY+S+++GF    D  +A  ++ EMM Q ++ +VV  S
Sbjct: 423 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCS 482

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V+++ LC++G++ +A  +   M+  G+ P+   Y+++I G C    +D   KLF  M+  
Sbjct: 483 VLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 542

Query: 388 --GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT------------ 433
                 DVV+YN L N  C+  ++  A+ L + ML +G  P  +T N             
Sbjct: 543 EPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPP 602

Query: 434 ----LFLGLFEIHQVER-----ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
               LFL    +  ++R     AL++ +EM    +  +  T++  I   CK   + E ++
Sbjct: 603 QDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 662


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 214/479 (44%), Gaps = 64/479 (13%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           + L ++  M+     PP   +F+I    L +    D  L++ + +   G  PD   +  +
Sbjct: 154 DVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTV 213

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  G V+    +L  +     + +  TF  ++ GLC   R+ EAA L  +  +  C
Sbjct: 214 IHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGC 273

Query: 209 EPDVFTYNTLINGLCRTGH--------------------TIVALNLFE-------EMANG 241
            P+  TY  L+ GLC                        T++   L +       E+   
Sbjct: 274 VPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYET 333

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
            G  G  C P+  TY+ +I GLCK G +  A +L  +M+D+   P +VTYT ++  FC  
Sbjct: 334 MGSKG--CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRN 391

Query: 302 NDWN-----------------------------------EAKRLFIEMMDQGVQPDVVTF 326
             W+                                   +A R   EM  QG +PD+ T+
Sbjct: 392 GMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTY 451

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + I+  LC N +M++A  L E ++  GV  N  TYNTLI           A  L   M  
Sbjct: 452 NTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVL 511

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +GC  D+VSYN LI   C++ +V+ ++ L SEM  KGIKP  V+YN L   L +  +V  
Sbjct: 512 HGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRD 571

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           AL+L  EM    +  D  TYN  I+GLCK G++  AL L   + +     +I++YN LI
Sbjct: 572 ALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILI 630



 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 211/456 (46%), Gaps = 38/456 (8%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIY 143
           + P  AL + D +       P   S+N +    A+   +  VLSL++R+ +   + P  +
Sbjct: 114 LAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTF 173

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T SI     C++GR      +L  + R    P+ V + ++I  LCA+  + EAA L  + 
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            +  C  DV T+N +++GLC  G    A  L + M          C PN +TY  ++ GL
Sbjct: 234 FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRG------CVPNAITYGFLLKGL 287

Query: 264 C-------------------------------KEGFVDKAKELFLKMKDENINPDVVTYT 292
           C                                +G + +A EL+  M  +   PD  TY+
Sbjct: 288 CLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYS 347

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            +I G C       A +L  EM D+G  P +VT+++++   C+NG  D    +LE+M  +
Sbjct: 348 ILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK 407

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G++ N   YN +I   C   ++D A +    M+S G   D+ +YNT+I   C N  +EEA
Sbjct: 408 GLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEA 467

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+  +L +G+    +TYNTL   L      + A+ L ++M  +  + D  +YN  I  
Sbjct: 468 EYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKA 527

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LC+ G V  ++ L   + +   + N VSYN LI  L
Sbjct: 528 LCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISEL 563



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 6/331 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   +++IL   L K     + + L + +   G  P I T++IL++ FC+ G   +   
Sbjct: 340 PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +     + N   +  +I  +C + R+ +A     + +    +PD+ TYNT+I  LC
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                  A  LFE + +     GVV   N +TYNT+I  L + G    A  L   M    
Sbjct: 460 NNNQMEEAEYLFENLLHE----GVVA--NAITYNTLIHALLRNGSWQDAISLANDMVLHG 513

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            + D+V+Y  +I+  C   + + +  L  EM ++G++P+ V++++++ ELCK  ++  A 
Sbjct: 514 CSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDAL 573

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L + M+ + + P+  TYNTLI+G C    +  A  L   + +     D+++YN LI+W+
Sbjct: 574 ELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWH 633

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           CK + + +A  L +  ++ GI P   T+  +
Sbjct: 634 CKARLLHDASMLLNRAVTSGITPNERTWGIM 664



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 6/262 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  +N +   + K++  D  +   + + S G  PDI T++ +I   C   ++     +  
Sbjct: 413 LEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFE 472

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L      NA+T+ +LI  L       +A +L     +  C  D+ +YN LI  LCR G
Sbjct: 473 NLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDG 532

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   ++ L  EMA    E G+  KPN V+YN +I  LCK   V  A EL  +M ++ + P
Sbjct: 533 NVDRSIMLLSEMA----EKGI--KPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTP 586

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY ++I G C     + A  L  ++ ++ V  D++T+++++   CK   +  AS LL
Sbjct: 587 DIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLL 646

Query: 347 ELMIWRGVNPNTYTYNTLIDGY 368
              +  G+ PN  T+  ++  +
Sbjct: 647 NRAVTSGITPNERTWGIMVQNF 668



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 45/87 (51%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K       L+L ++L++  +  DI T++ILI+  CK   +    ++
Sbjct: 586 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASML 645

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAES 191
           L R + S  TPN  T+  +++    +S
Sbjct: 646 LNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 214/424 (50%), Gaps = 10/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH--YDTVLSLFKRLNSAGLFPDIYTHS 146
           +AL + D M R   +P P     IL    ++     + + + + + L+  G   D+   +
Sbjct: 133 DALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCN 192

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           +++N  C  G      + L R L + F   P+ V++ +++KGLC   R      L  +  
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+V T+NTLI  LCR G       +  +M +        C P+   Y T++DG+C
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG------CTPDIRMYATVLDGVC 306

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG ++ A E+  +M    + P+VV Y +V++G C A  W +A+ L  EM D     D V
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV 366

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF++++D  C+NG + +   LLE M+  G  P+  TY T+I+G+C    ID A  L  SM
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            + GC  + +SY  ++   C  +   +A  L S+M+ +G  P  VT+NT+   L +   V
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A++L  +M  N  + D  +Y+  IDGL K+G   EALEL   + +     N + Y+ +
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546

Query: 505 IDGL 508
              L
Sbjct: 547 ASAL 550



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+R+   PP V +FN L G L +N  ++ V  +  ++   G  PDI  ++ +++  
Sbjct: 247 LMEEMVRVG-CPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGV 305

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +     +L R+      PN V + +++KGLC+  R  +A  L  +     C  D 
Sbjct: 306 CKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDD 365

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+N L++  C+ G     + L E+M     E G  C P+ +TY T+I+G CKEG +D+A
Sbjct: 366 VTFNILVDFFCQNGLVYRVIELLEQML----EHG--CVPDVITYTTVINGFCKEGLIDEA 419

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L   M      P+ ++YT V++G C A  W +A+ L  +M++QG  P+ VTF+ +++ 
Sbjct: 420 VMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINF 479

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G +++A  LL+ M+  G +P+  +Y+T+IDG     K D A +L   M + G   +
Sbjct: 480 LCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + Y+++ +   K   +   + ++  +    I+   V YN +   L +    +RA++   
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLA 599

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            M  +    +  TY   I GL   GFV EA E+ 
Sbjct: 600 YMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+N +   L   K +  V  L + +   G  P++ T + LI   C+ G       V
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++    TP+   + +++ G+C E  +  A  +  +   +  +P+V  YNT++ GLC 
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L  EM + +      C  + VT+N ++D  C+ G V +  EL  +M +   
Sbjct: 343 AERWEQAEELLAEMFDND------CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGC 396

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TYT+VI GFC     +EA  L   M   G +P+ +++++++  LC   +   A  
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAED 456

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  MI +G +PN  T+NT+I+  C    ++ A +L   M  NGC  D++SY+T+I+   
Sbjct: 457 LMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLG 516

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +EAL L + M++KG+ P  + Y+++   L +  ++ R +++FD ++   + +D  
Sbjct: 517 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAV 576

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  I  LCK G    A+E    +  S    N  +Y  LI GL
Sbjct: 577 LYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGL 620



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 202/394 (51%), Gaps = 13/394 (3%)

Query: 119 KNKHYDTVLSLFKRL-NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
           +    D  L L + L  S G  PD+ +++ ++   C   R      ++  ++R    PN 
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260

Query: 178 VTFTSLIKGLCAES---RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           VTF +LI  LC      R+ +  A    H    C PD+  Y T+++G+C+ GH  VA  +
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDH---GCTPDIRMYATVLDGVCKEGHLEVAHEI 317

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            + M +    +G+  KPN V YNT++ GLC     ++A+EL  +M D +   D VT+  +
Sbjct: 318 LDRMPS----YGL--KPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNIL 371

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +  FC          L  +M++ G  PDV+T++ +++  CK G +D+A  LL+ M   G 
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PNT +Y  ++ G C  ++   A  L   M   GC  + V++NT+IN+ CK   VE+A+ 
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE 491

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  +ML  G  P +++Y+T+  GL +  + + AL+L + M    ++ +T  Y++    L 
Sbjct: 492 LLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 551

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G +   +++F  I+D     + V YN +I  L
Sbjct: 552 KEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 8/284 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FNIL     +N     V+ L +++   G  PD+ T++ +IN FCK G +    ++L  +
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +++T ++KGLC+  R ++A  L ++     C P+  T+NT+IN LC+ G  
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 229 IVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A+ L ++M  NG       C P+ ++Y+T+IDGL K G  D+A EL   M ++ ++P+
Sbjct: 487 EQAIELLKQMLLNG-------CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y+S+          N   ++F  + D  ++ D V ++ ++  LCK G  D+A   L 
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLA 599

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            M+  G  PN  TY  LI G      +  A+++   + S G + 
Sbjct: 600 YMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 643



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 165/400 (41%), Gaps = 77/400 (19%)

Query: 180 FTSLIKGLCAESRIM----------------------------EAAALFTKHRVFA---C 208
            ++LI+ LCA  R                               A  L +  R+ A    
Sbjct: 52  LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVPV 111

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC---- 264
            P+ +TY  ++  LC  G    AL++ +EM          C P    Y+ I++  C    
Sbjct: 112 PPNAYTYFPVVRALCARGRIADALSVLDEMRRRG------CAPIPPMYHVILEAACSRGG 165

Query: 265 -----------------------------------KEGFVDKAKELFLKMKDE-NINPDV 288
                                              + G VD+A  L   +      +PDV
Sbjct: 166 GGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDV 225

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V+Y +V++G C A  W   + L  EM+  G  P+VVTF+ ++  LC+NG  ++  ++L  
Sbjct: 226 VSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQ 285

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G  P+   Y T++DG C    ++ A ++   M S G   +VV YNT++   C  + 
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            E+A  L +EM         VT+N L     +   V R ++L ++M  +    D  TY  
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I+G CK G + EA+ L +++       N +SY  ++ GL
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGL 445


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/345 (36%), Positives = 191/345 (55%), Gaps = 8/345 (2%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V   +L     PN  T  +++        I+EA    +K       PD FTY +LI G C
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R      A  +F  M N        C+ N V+Y TII GLC+ G +D+   LF KM++++
Sbjct: 261 RNNDVNSAYKVFNMMPNKG------CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 284 INPDVVTYTSVIRGFCYANDWN-EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             P V TYT +I    + ND N E   LF EM ++  +P+V T++V++D +CK  K+D++
Sbjct: 315 CYPTVRTYTVIIHAL-FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R+L  M+ +G+ P+  TYN LI GYC   +I+ A ++   MESN C  +  +YN LI  
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           + K K V +A++L S+ML   + P++VTYN+L     +    + A KL D ++ N +  D
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +TY+ FID LCKS  + EA +LF ++++   + N V Y  LIDG
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 200/420 (47%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A  +F+ M         VS   I+ G L +    D  +SLFK++     +P + T+++
Sbjct: 266 NSAYKVFNMMPNKGCRRNEVSYTTIIHG-LCEAGRIDEGISLFKKMREDDCYPTVRTYTV 324

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+      R   G  +   +      PN  T+T ++  +C E ++ E+  +  +     
Sbjct: 325 IIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKG 384

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P V TYN LI G C  G    AL +   M + N      C+PN  TYN +I G  K  
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN------CRPNERTYNELICGFSKRK 438

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V KA  L  KM +  + P +VTY S+I   C A  ++ A +L   + + G+ PD  T+S
Sbjct: 439 HVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS 498

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V +D LCK+ +M++A  L   +  +G+  N   Y  LIDG+C   KID A  L   M S 
Sbjct: 499 VFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSE 558

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C+ +  +YN+LI   CK   V+E LS+   M   G+KPTV TY  L   +      + A
Sbjct: 559 DCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHA 618

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++F++M       D YTY  FI   C SG V EA  +   + ++    + ++Y  LI  
Sbjct: 619 NRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISA 678



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 189/374 (50%), Gaps = 6/374 (1%)

Query: 135 SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
            AGL PD +T++ LI  +C+   V+  + V   +       N V++T++I GLC   RI 
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           E  +LF K R   C P V TY  +I+ L      +  ++LF EM   +      C+PN  
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS------CEPNVH 355

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY  ++D +CKE  +D+++ +  +M ++ + P VVTY ++IRG+C       A  +   M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
                +P+  T++ ++    K   + KA  LL  M+   + P+  TYN+LI   C     
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A KL   ++ NG + D  +Y+  I+  CK+K +EEA  L++ +  KGIK   V Y  L
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G  +  +++ A+ L + M       ++ TYN+ I G+CK G V E L +   +     
Sbjct: 536 IDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595

Query: 495 ELNIVSYNCLIDGL 508
           +  + +Y  LI+ +
Sbjct: 596 KPTVATYTILIEEM 609



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 200/402 (49%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+N L   LA+    D +  ++  + +  + P+IYT + ++N + KMG +    + + 
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +I ++  +P++ T+TSLI G C  + +  A  +F       C  +  +Y T+I+GLC  G
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                ++LF++M   +      C P   TY  II  L       +  +LF +M++ +  P
Sbjct: 299 RIDEGISLFKKMREDD------CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEP 352

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +V TYT ++   C     +E++R+  EMM++G+ P VVT++ ++   C+ G+++ A  +L
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
            LM      PN  TYN LI G+     +  A  L   M  +     +V+YN+LI+  CK 
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKA 472

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              + A  L   +   G+ P   TY+     L +  ++E A  LF+ ++   + A+   Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              IDG CK+G + EA+ L   +       N  +YN LI G+
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 192/418 (45%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E + +F  M R     P V ++ ++   L  N      + LF  +      P+++T+++
Sbjct: 301 DEGISLFKKM-REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK  ++     +L  ++     P+ VT+ +LI+G C E RI  A  +        
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TYN LI G  +  H   A+ L  +M            P+ VTYN++I   CK G
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK------LTPSLVTYNSLIHVQCKAG 473

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D A +L   +K+  + PD  TY+  I   C +    EA  LF  + ++G++ + V ++
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK GK+D+A  LLE M      PN+ TYN+LI G C   K+     +  +M   
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    V +Y  LI    +  D + A  ++++M+S G KP V TY            V+ A
Sbjct: 594 GVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEA 653

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             +   M    V  D+ TY   I    + G   +A  + + + D+  + +   +N LI
Sbjct: 654 EGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 209/404 (51%), Gaps = 10/404 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ +   LAK       L +F+ + S    P + T+++LIN  C  G       +   +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 169 LRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            R     P+  T+ +LI GLC+      A  L ++ R      +VFTY+++I  L +   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              +  + EEM          C P+   +N ++ G  +   ++KA+E++  M +    PD
Sbjct: 132 PEESYKVLEEM------MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMM--DQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            V+Y  +I G       +E+ ++  EM     G  P+V+TFS ++  LC+ G+++KA  +
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
              M+  G  PN YTY TLI G C  +K+  AR+LF  M       D V+YN+LI  YCK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 406 NKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              ++EA  LY EM    G++PT+VT+NTL  G  ++ ++ RA +L  EM    +AADT 
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I GL ++  + EALE+++ +R+ K+ L+ VS    + GL
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 215/424 (50%), Gaps = 11/424 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSI 147
           +AL +F+ M +     P + ++N+L         +   L LF+ +     + PD +T++ 
Sbjct: 28  QALEVFETM-KSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNT 86

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  G       +L  +       N  T++S+IK L  E++  E+  +  +     
Sbjct: 87  LISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAG 146

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDVF +N ++ G  R+ +   A  +++ M     E G   KP+ V+Y+ +I GL K G
Sbjct: 147 CNPDVFAFNGVMQGFARSNNMEKAREVYQHMV----ESGY--KPDNVSYHILIHGLAKIG 200

Query: 268 FVDKAKELF--LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            +D++ ++   + M+     P+V+T++++I G C   +  +A  +F  M++ G +P+  T
Sbjct: 201 KLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 260

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LC+  K+ +A  L E M    + P+   YN+LI GYC    +D A KL+  M 
Sbjct: 261 YTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 320

Query: 386 SN-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G    +V++NTLI+ +CK   +  A  L +EM +KG+     TY  L  GL    ++
Sbjct: 321 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKL 380

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL+++ +MR      D  +  +F+ GLCK+G + +A  +F A R S    N  ++  L
Sbjct: 381 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 440

Query: 505 IDGL 508
            + L
Sbjct: 441 SESL 444



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 185/359 (51%), Gaps = 9/359 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +++ +   L K    +    + + + +AG  PD++  + ++  F +   +     V  
Sbjct: 116 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 175

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCR 224
            ++ S + P+ V++  LI GL    ++ E+  + ++  + A    P+V T++TLI+GLCR
Sbjct: 176 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCR 235

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           TG    AL +F  M          CKPN  TY T+I GLC+   V +A+ELF KM    I
Sbjct: 236 TGELEKALEVFGSMLEAG------CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIMDELCKNGKMDKAS 343
            PD V Y S+I G+C     +EA++L+ EM    G+QP +VTF+ ++D  CK GK+ +A+
Sbjct: 290 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 349

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  M  +G+  +T TY  LI G     K+D A +++  M     + D VS  + +   
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           CK  ++++A +++      G  P   T+  L   L ++ +VE A KL +  +   + A 
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 7/405 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +AL +F  M R     P   ++N L   L  + + +    L   +    +  +++T+S 
Sbjct: 62  GKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSS 121

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I    K  +    + VL  ++ +   P+   F  +++G  A S  ME A    +H V +
Sbjct: 122 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGF-ARSNNMEKAREVYQHMVES 180

Query: 208 C-EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +PD  +Y+ LI+GL + G    +L +  EMA     +     PN +T++T+I GLC+ 
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGY----VPNVITFSTLIHGLCRT 236

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++KA E+F  M +    P+  TYT++I G C A    +A+ LF +M    + PD V +
Sbjct: 237 GELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAY 296

Query: 327 SVIMDELCKNGKMDKASRLL-ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           + ++   CK G MD+A +L  E+    G+ P   T+NTLIDG+C   K+  A +L   M 
Sbjct: 297 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 356

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           + G   D  +Y  LI    +   ++EAL +Y +M  K      V+  +   GL +   ++
Sbjct: 357 TKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNID 416

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +A  +F+  R++    +  T+    + L K G V +A +L    +
Sbjct: 417 QAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 228/453 (50%), Gaps = 50/453 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M+R  PSP  V+ F+ L     K    D   SL+  +   G+ PD+  +SILIN   
Sbjct: 263 FDMMVRSGPSPNLVT-FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 154 KMGRVSHG-------------------------FVVLG----------RILRSCFTPNAV 178
           + G++  G                         +V +G          R+L+   +PN V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T++ LI GLC   R++EA  +F +      EP V TY++LI+G C++          E +
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS----------ENL 431

Query: 239 ANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +G G +G++ +    P+ V  + +I+GL ++G +D+A   F +     +  +   + ++
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G        +  +++I M    V PDVVT++V++  L + G++D+A  L   ++ +G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +P+   Y TLIDG+C         ++F  M+SNG   D+  YN LIN + +   VE  L 
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  E++  G++P +VTYNT+  G   +    +A+KLF+ ++      +  T+   ID  C
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K G + +A+ +F ++ +   E NI++Y+CLIDG
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 220/420 (52%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ ++  ML+   SP  V +++IL   L +N        +F ++   GL P + T+S 
Sbjct: 362 GKAIEVYTRMLKEGISPN-VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK   +  GF + G +LR    P+ V  + LI GL  +  + EA   F +     
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG 480

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              + + +N LI+G  R   T   L ++  M    G + V+  P+ VTY  ++ GL ++G
Sbjct: 481 LTLNNYLFNALIDGCFRLKRTRDGLKMYILM----GMYKVI--PDVVTYTVLVKGLAEQG 534

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  LF ++  +  +PD + Y ++I GFC   D     ++F  M   G+ PD+  ++
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V+++   + G ++    LL  +I  G+ P+  TYNT+I GYC       A KLF  ++  
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCG 654

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + +++  LI+ YCK+  +++A+ ++S ML +G +P ++TY+ L  G F+    E A
Sbjct: 655 RTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESA 714

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+++M  + V+ +  +Y+  IDGLCK G + EA   F+         ++++Y  LI G
Sbjct: 715 FELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +   N +   L            F  +  +G  P++ T S LIN +CK  R+   F +
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ V ++ LI GL    ++ E  +LF+       + DV  ++++++   R
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ ++  M            PN VTY+ +I+GLC+ G V +A  +F ++  + +
Sbjct: 358 VGDLGKAIEVYTRMLKEG------ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGL 411

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V+TY+S+I GFC + +  +   L+  M+ +G  PDVV  S++++ L + G MD+A R
Sbjct: 412 EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALR 471

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
                + RG+  N Y +N LIDG     +     K+++ M     + DVV+Y  L+    
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   ++EAL+L+ ++L KG  P  + Y TL  G  +       L++F  M+ N +  D  
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            YN  I+   + G V   LEL R I     E +IV+YN +I G
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 202/411 (49%), Gaps = 18/411 (4%)

Query: 52  LKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFN 111
           LK+ L  +V   +SL   +   CKS    D           ++  MLR     P V   +
Sbjct: 407 LKQGLEPSVLTYSSL---IDGFCKSENLRD--------GFGLYGIMLR-KGHVPDVVVCS 454

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           +L   L++    D  L  F +    GL  + Y  + LI+   ++ R   G  +   +   
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMY 514

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              P+ VT+T L+KGL  + R+ EA ALF +       PD   Y TLI+G C+       
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATG 574

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L +F+ M + NG F     P+   YN +I+   +EG V+   EL  ++    + PD+VTY
Sbjct: 575 LQIFKLMQS-NGIF-----PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I G+C    +++A +LF  +     QP+ +TF++++D  CK+G+MD A  +   M+ 
Sbjct: 629 NTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLE 688

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           RG  PN  TY+ LIDGY  T+  + A +L+  M  +    ++VSY+ LI+  CK   +EE
Sbjct: 689 RGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEE 748

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           A   +   + + + P V+ Y  L  G  ++ ++  A+ L+D M  N +  D
Sbjct: 749 ASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
            +  + N F K G V  G      ++     P  V    ++KGLC  ++I  A+  F   
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 P++ T++TLIN  C+      A +L+  M     E G+V  P+ V Y+ +I+GL
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI----EKGIV--PDLVIYSILINGL 320

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + G +++   LF       +  DVV ++S++  +    D  +A  ++  M+ +G+ P+V
Sbjct: 321 FRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNV 380

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT+S++++ LC+NG++ +A  +   ++ +G+ P+  TY++LIDG+C ++ +     L+  
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G + DVV  + LIN   +   ++EAL  + + + +G+      +N L  G F + +
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKR 500

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
               LK++  M    V  D  TY   + GL + G + EAL LF  +    +  + + Y  
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560

Query: 504 LIDG 507
           LIDG
Sbjct: 561 LIDG 564



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 190/405 (46%), Gaps = 15/405 (3%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           P + ++ L  C  +N   D  +  F  ++  G+    Y  S +++      R+    V+L
Sbjct: 139 PSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRID---VIL 195

Query: 166 GRILRSC--FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
                 C         F S +K    E  +    AL  +  V    P +   N ++ GLC
Sbjct: 196 ENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLV----PKIVDCNKILKGLC 251

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                 VA + F+ M            PN VT++T+I+  CKE  +D+A  L+  M ++ 
Sbjct: 252 MGNQIGVASDFFDMMVRSGPS------PNLVTFSTLINVYCKELRLDEAFSLYNLMIEKG 305

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD+V Y+ +I G   A    E   LF   + +GV+ DVV FS IMD   + G + KA 
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +   M+  G++PN  TY+ LI+G C   ++  A  +F  +   G    V++Y++LI+ +
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK++++ +   LY  ML KG  P VV  + L  GL     ++ AL+ F +  +  +  + 
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y +N  IDG  +     + L+++  +   K   ++V+Y  L+ GL
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 7/279 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F  +L+   SP  +    ++ G   K +   T L +FK + S G+FPDI  +++
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDG-FCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN F + G V +   +L  I++    P+ VT+ ++I G C+     +A  LF   +   
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+  T+  LI+  C+ G    A+ +F  M     E      PN +TY+ +IDG  K  
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE------PNILTYSCLIDGYFKTE 709

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A EL+ KM  + ++P++V+Y+ +I G C      EA   F   + + + PDV+ + 
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYG 769

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           +++   CK G++ +A  L + M+  G+ P+      L +
Sbjct: 770 ILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAE 808


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 209/421 (49%), Gaps = 9/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +    L    +P  V  +N L     K  +    L +   + S G+ P+  T + 
Sbjct: 400 NEANSVLKETLEKGFTPNEVV-YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I  FCK+G++     +L  +L   F+ N   FT++I  LC  SR   A     +  +  
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             P+     TL+ GLC+ G    A+ L F  +  G G        N VT N +I GLCK 
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA-------NLVTTNALIHGLCKT 571

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G + +A  L  KM +     D +TY ++I G C      E  +L  EM+ QG++PD  T+
Sbjct: 572 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 631

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++  +C+ GK+D+A  L      R + PN YTY  +IDGYC  DKI+   KLF  + +
Sbjct: 632 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 691

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                + V YNTLI  YC+N +  EA  L+ +M SKGI PT  TY++L  G+  I ++E 
Sbjct: 692 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 751

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A  L DEMR+  +  +   Y   I G CK G + + + + + +       N ++Y  +ID
Sbjct: 752 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 811

Query: 507 G 507
           G
Sbjct: 812 G 812



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 199/404 (49%), Gaps = 7/404 (1%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG   +    +A CI + ML    S  P  +F  +   L  N  +++ L   + +    +
Sbjct: 461 QGFCKIGQMEQAECILEEMLSRGFSINP-GAFTTIIHWLCMNSRFESALRFLREMLLRNM 519

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+    + L+   CK G+ S    +  R+L   F  N VT  +LI GLC    + EA  
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L  K        D  TYNTLI+G C+ G       L  EM     E      P+T TYN 
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE------PDTFTYNL 633

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G+C+ G +D+A  L+ + K  ++ P+V TY  +I G+C A+   E ++LF E++ Q 
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 693

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++ + V ++ ++   C+NG   +A +L + M  +G+ P T TY++LI G C   +++ A+
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L   M   G + +VV Y  LI  YCK   +++ +++  EM S  I P  +TY  +  G 
Sbjct: 754 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 813

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            +   ++ A KL  EM    +  DT TYN   +G CK G + E 
Sbjct: 814 SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 198/401 (49%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  F+       K    +  + LF  +   G+ P++ T++ LI+  CK G +   F  
Sbjct: 311 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF 370

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++       +T++ LI GL    +  EA ++  +       P+   YNTLI+G C+
Sbjct: 371 KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 430

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL +  +M +          PN+VT N+II G CK G +++A+ +  +M     
Sbjct: 431 MGNLGDALRIRGDMVSKG------INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + +   +T++I   C  + +  A R   EM+ + ++P+    + ++  LCK GK   A  
Sbjct: 485 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 544

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   ++ +G   N  T N LI G C T  +  A +L   M   G + D ++YNTLI+  C
Sbjct: 545 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC 604

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VEE   L  EM+ +GI+P   TYN L  G+  I +++ A+ L++E +   +  + Y
Sbjct: 605 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 664

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY   IDG CK+  + E  +LF  +     ELN V YN LI
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 705



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 206/420 (49%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F  M ++  SP  V+  N++ G L K+ + D      +++   G+   + T+S+L
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHG-LCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 389

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN   K+ + +    VL   L   FTPN V + +LI G C    + +A  +         
Sbjct: 390 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T N++I G C+ G    A  + EEM +    F +    N   + TII  LC    
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG--FSI----NPGAFTTIIHWLCMNSR 503

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            + A     +M   N+ P+    T+++ G C     ++A  L+  ++++G   ++VT + 
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 563

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK G M +A RLL+ M+ RG   +  TYNTLI G C   K++   KL   M   G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D  +YN LI+  C+   ++EA++L++E  S+ + P V TY  +  G  +  ++E   
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KLF E+   ++  ++  YN  I   C++G  +EA +L   +R         +Y+ LI G+
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 7/341 (2%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L G L K   +   + L+ RL   G   ++ T + LI+  CK G +     +L ++L   
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F  + +T+ +LI G C E ++ E   L  +      EPD FTYN LI+G+CR G    A+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           NL+ E  + +        PN  TY  +IDG CK   +++ ++LF ++  +N+  + V Y 
Sbjct: 649 NLWNECKSRD------LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYN 702

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++IR +C   +  EA +L  +M  +G+ P   T+S ++  +C  G+M+ A  L++ M   
Sbjct: 703 TLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKE 762

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN   Y  LI GYC   ++D    +   M S     + ++Y  +I+ Y K+ D++ A
Sbjct: 763 GLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTA 822

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
             L  EM+ KGI P  VTYN L  G  +  ++E   KL  E
Sbjct: 823 AKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG-KLLAE 862



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 200/400 (50%), Gaps = 13/400 (3%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFP-DIYTHSILINCFCKMGR---VSHGFVVLGR 167
           +LFG   KN+H + + S    LN  G     +    +LI+ +C   R     +   V   
Sbjct: 212 VLFGD-PKNRHIE-IASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRF 269

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +      P   T T L+  L   + + ++  +F   R     PDV+ ++T IN  C+ G 
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGK 328

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ LF +M     + GV   PN VTYN +I GLCK G +D+A     KM  + +N  
Sbjct: 329 VEDAIQLFFDME----KLGV--SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           ++TY+ +I G      +NEA  +  E +++G  P+ V ++ ++D  CK G +  A R+  
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M+ +G+NPN+ T N++I G+C   +++ A  +   M S G   +  ++ T+I+W C N 
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
             E AL    EML + ++P      TL  GL +  +   A++L+  +      A+  T N
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             I GLCK+G + EA+ L + + +  + L+ ++YN LI G
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 602



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 7/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V T   L++ L +      +  +FE M  G         P+   ++T I+  CK G V
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQG-------VSPDVYLFSTAINAFCKGGKV 329

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A +LF  M+   ++P+VVTY ++I G C   + +EA R   +M+  GV   ++T+SV+
Sbjct: 330 EDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 389

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ L K  K ++A+ +L+  + +G  PN   YNTLIDGYC    +  A ++   M S G 
Sbjct: 390 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V+ N++I  +CK   +E+A  +  EMLS+G       + T+   L    + E AL+
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EM   ++  +       + GLCK G   +A+EL+  + +  +  N+V+ N LI GL
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 568



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
            G  N+    +A C+ D M R     P V  +  L G   K    D V+++ + ++S  +
Sbjct: 741 HGMCNIGRMEDAKCLIDEM-RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 799

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+  T++++I+ + K G +     +L  ++     P+ VT+  L  G C E +I E   
Sbjct: 800 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL 859

Query: 199 L 199
           L
Sbjct: 860 L 860


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 203/401 (50%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N+L   L K       + + + L   GL  D+ T+  L+  FC++ +   G  ++ 
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++   F+P     + L+ GL  + +I +A  L  K   F   P++F YN LIN LC+ G
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG 379

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L+  M+  N       +PN +TY+ +ID  C+ G +D A   F +M  + I  
Sbjct: 380 DLDKAELLYSNMSLMN------LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGE 433

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V  Y S+I G C   D + A+ LFIEM ++GV+P   TF+ ++   CK+ ++ KA +L 
Sbjct: 434 TVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLY 493

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI  G+ PN YT+  LI G C T+K+  A +LF  +         V+YN LI  YC++
Sbjct: 494 NKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRD 553

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +++A  L  +M  KG+ P   TY  L  GL    +V +A    D++ + +V  +   Y
Sbjct: 554 GKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY 613

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  + G C+ G ++EAL     +      +++V +  LIDG
Sbjct: 614 SALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDG 654



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 216/444 (48%), Gaps = 13/444 (2%)

Query: 72  ERCKSSGQGDINLITPNEALC--IFDY-----MLRMHPSPPPVSSFNILFGCLAKNKHYD 124
           +RCK S     NL+  N  L   IFD      ++  +   P V + + L   L K + + 
Sbjct: 148 KRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFI 207

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           TV  LF    +AG+ PD YT S ++   C++         +  +  + F  + VT+  LI
Sbjct: 208 TVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLI 267

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            GLC   R+ EA  +           DV TY TL+ G CR       + L +EM     E
Sbjct: 268 HGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV----E 323

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
            G    P     + ++DGL K+G +D A EL +K+      P++  Y ++I   C   D 
Sbjct: 324 LGF--SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL 381

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           ++A+ L+  M    ++P+ +T+S+++D  C++G++D A    + MI  G+    Y YN+L
Sbjct: 382 DKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL 441

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+G C    +  A  LF+ M + G      ++ +LI+ YCK+  V++A  LY++M+  GI
Sbjct: 442 INGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGI 501

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            P V T+  L  GL   +++  A +LFDE+    +     TYN  I+G C+ G + +A E
Sbjct: 502 TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   +       +  +Y  LI GL
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGL 585



 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 208/416 (50%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+ +  SP   +   ++ G L K    D    L  ++   G  P+++ ++ LIN  
Sbjct: 317 LMDEMVELGFSPTEAAVSGLVDG-LRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G +    ++   +      PN +T++ LI   C   R+  A + F +         V
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETV 435

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           + YN+LING C+ G    A +LF EM N   E      P   T+ ++I G CK+  V KA
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKGVE------PTATTFTSLISGYCKDLQVQKA 489

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L+ KM D  I P+V T+T++I G C  N   EA  LF E++++ ++P  VT++V+++ 
Sbjct: 490 FKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C++GK+DKA  LLE M  +G+ P+TYTY  LI G C T ++  A+     +       +
Sbjct: 550 YCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + Y+ L++ YC+   + EALS   EM+ +GI   +V +  L  G  +    +    L  
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +M    +  D   Y + ID   K G   +A E +  +   +   N+V+Y  L++GL
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 218/453 (48%), Gaps = 43/453 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+  FD M++       V ++N L     K        SLF  + + G+ P   T + LI
Sbjct: 419 AISYFDRMIQ-DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +CK  +V   F +  +++ +  TPN  TFT+LI GLC+ +++ EA+ LF +      +
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIK 537

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P   TYN LI G CR G    A  L E+M     + G+V  P+T TY  +I GLC  G V
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMH----QKGLV--PDTYTYRPLISGLCSTGRV 591

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA--------KR------------ 309
            KAK+    +  +N+  + + Y++++ G+C      EA        +R            
Sbjct: 592 SKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVL 651

Query: 310 ---------------LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
                          L  +M DQG++PD V ++ ++D   K G   KA    +LM+    
Sbjct: 652 IDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC 711

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  TY  L++G C   ++D A  LF  M++     + ++Y   ++   K  +++EA+ 
Sbjct: 712 FPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG 771

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+  ML KG+    VT+N +  G  ++ +   A K+  EM  N +  D  TY+  I   C
Sbjct: 772 LHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +SG V  +++L+  + +   E ++V+YN LI G
Sbjct: 831 RSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYG 863



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 197/394 (50%), Gaps = 15/394 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD ++     P  V+ +N+L     ++   D    L + ++  GL PD YT+  L
Sbjct: 523 EASELFDELVERKIKPTEVT-YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  GRVS     +  + +     N + +++L+ G C E R+MEA +   +      
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D+  +  LI+G  +        +L ++M +         +P+ V Y ++ID   KEG 
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG------LRPDNVIYTSMIDTYSKEGS 695

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             KA E +  M  E   P+VVTYT+++ G C A + + A  LF  M    V P+ +T+  
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC 755

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L K G M +A  L   M+ +G+  NT T+N +I G+C   +   A K+   M  NG
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENG 814

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D V+Y+TLI  YC++ +V  ++ L+  ML++G++P +V YN L  G     ++++A 
Sbjct: 815 IFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAF 874

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           +L D+M R  +  D    N ++    K G + EA
Sbjct: 875 ELRDDMLRRGIIPD----NKYLQ---KKGTIFEA 901



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 188/404 (46%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L K    D    L+  ++   L P+  T+SILI+ FC+ GR+      
Sbjct: 363 PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISY 422

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+++         + SLI G C    +  A +LF +      EP   T+ +LI+G C+
Sbjct: 423 FDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCK 482

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L+ +M + NG       PN  T+  +I GLC    + +A ELF ++ +  I
Sbjct: 483 DLQVQKAFKLYNKMID-NG-----ITPNVYTFTALISGLCSTNKMAEASELFDELVERKI 536

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P  VTY  +I G+C     ++A  L  +M  +G+ PD  T+  ++  LC  G++ KA  
Sbjct: 537 KPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKD 596

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            ++ +  + V  N   Y+ L+ GYC   ++  A      M   G   D+V +  LI+   
Sbjct: 597 FIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGAL 656

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D +    L  +M  +G++P  V Y ++     +    ++A + +D M       +  
Sbjct: 657 KQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVV 716

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   ++GLCK+G +  A  LF+ ++ +    N ++Y C +D L
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNL 760



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 195/432 (45%), Gaps = 41/432 (9%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           ++L   L +  H   V S F        F      ++L+  +    R+    V++  +  
Sbjct: 124 SLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFA 183

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
           +   P   T ++L+ GL    + +    LF +       PD +T + ++  +C     + 
Sbjct: 184 NNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLR 243

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A      M     +  +      VTYN +I GLCK   V +A E+   +  + +  DVVT
Sbjct: 244 AKEKIRWMEANGFDLSI------VTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVT 297

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQ------------------------------ 320
           Y +++ GFC    +    +L  EM++ G                                
Sbjct: 298 YCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG 357

Query: 321 -----PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                P++  ++ +++ LCK G +DKA  L   M    + PN  TY+ LID +C + ++D
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLD 417

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A   F  M  +G    V +YN+LIN  CK  D+  A SL+ EM +KG++PT  T+ +L 
Sbjct: 418 VAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +  QV++A KL+++M  N +  + YT+   I GLC +  + EA ELF  + + K +
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIK 537

Query: 496 LNIVSYNCLIDG 507
              V+YN LI+G
Sbjct: 538 PTEVTYNVLIEG 549


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 228/453 (50%), Gaps = 50/453 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M+R  PSP  V+ F+ L     K    D   SL+  +   G+ PD+  +SILIN   
Sbjct: 263 FDMMVRSGPSPNLVT-FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 154 KMGRVSHG-------------------------FVVLG----------RILRSCFTPNAV 178
           + G++  G                         +V +G          R+L+   +PN V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T++ LI GLC   R++EA  +F +      EP V TY++LI+G C++          E +
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS----------ENL 431

Query: 239 ANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +G G +G++ +    P+ V  + +I+GL ++G +D+A   F +     +  +   + ++
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G        +  +++I M    V PDVVT++V++  L + G++D+A  L   ++ +G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +P+   Y TLIDG+C         ++F  M+SNG   D+  YN LIN + +   VE  L 
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  E++  G++P +VTYNT+  G   +    +A+KLF+ ++      +  T+   ID  C
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K G + +A+ +F ++ +   E NI++Y+CLIDG
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 220/420 (52%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ ++  ML+   SP  V +++IL   L +N        +F ++   GL P + T+S 
Sbjct: 362 GKAIEVYTRMLKEGISPN-VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK   +  GF + G +LR    P+ V  + LI GL  +  + EA   F +     
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG 480

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              + + +N LI+G  R   T   L ++  M    G + V+  P+ VTY  ++ GL ++G
Sbjct: 481 LTLNNYLFNALIDGCFRLKRTRDGLKMYILM----GMYKVI--PDVVTYTVLVKGLAEQG 534

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  LF ++  +  +PD + Y ++I GFC   D     ++F  M   G+ PD+  ++
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V+++   + G ++    LL  +I  G+ P+  TYNT+I GYC       A KLF  ++  
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCG 654

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + +++  LI+ YCK+  +++A+ ++S ML +G +P ++TY+ L  G F+    E A
Sbjct: 655 RTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESA 714

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L+++M  + V+ +  +Y+  IDGLCK G + EA   F+         ++++Y  LI G
Sbjct: 715 FELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +   N +   L            F  +  +G  P++ T S LIN +CK  R+   F +
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+ V ++ LI GL    ++ E  +LF+       + DV  ++++++   R
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ ++  M            PN VTY+ +I+GLC+ G V +A  +F ++  + +
Sbjct: 358 VGDLGKAIEVYTRMLKEG------ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGL 411

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V+TY+S+I GFC + +  +   L+  M+ +G  PDVV  S++++ L + G MD+A R
Sbjct: 412 EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALR 471

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
                + RG+  N Y +N LIDG     +     K+++ M     + DVV+Y  L+    
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   ++EAL+L+ ++L KG  P  + Y TL  G  +       L++F  M+ N +  D  
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            YN  I+   + G V   LEL R I     E +IV+YN +I G
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 202/411 (49%), Gaps = 18/411 (4%)

Query: 52  LKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFN 111
           LK+ L  +V   +SL   +   CKS    D           ++  MLR     P V   +
Sbjct: 407 LKQGLEPSVLTYSSL---IDGFCKSENLRD--------GFGLYGIMLR-KGHVPDVVVCS 454

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           +L   L++    D  L  F +    GL  + Y  + LI+   ++ R   G  +   +   
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMY 514

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              P+ VT+T L+KGL  + R+ EA ALF +       PD   Y TLI+G C+       
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATG 574

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L +F+ M + NG F     P+   YN +I+   +EG V+   EL  ++    + PD+VTY
Sbjct: 575 LQIFKLMQS-NGIF-----PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I G+C    +++A +LF  +     QP+ +TF++++D  CK+G+MD A  +   M+ 
Sbjct: 629 NTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLE 688

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           RG  PN  TY+ LIDGY  T+  + A +L+  M  +    ++VSY+ LI+  CK   +EE
Sbjct: 689 RGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEE 748

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           A   +   + + + P V+ Y  L  G  ++ ++  A+ L+D M  N +  D
Sbjct: 749 ASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
            +  + N F K G V  G      ++     P  V    ++KGLC  ++I  A+  F   
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 P++ T++TLIN  C+      A +L+  M     E G+V  P+ V Y+ +I+GL
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI----EKGIV--PDLVIYSILINGL 320

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + G +++   LF       +  DVV ++S++  +    D  +A  ++  M+ +G+ P+V
Sbjct: 321 FRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNV 380

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT+S++++ LC+NG++ +A  +   ++ +G+ P+  TY++LIDG+C ++ +     L+  
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G + DVV  + LIN   +   ++EAL  + + + +G+      +N L  G F + +
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKR 500

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
               LK++  M    V  D  TY   + GL + G + EAL LF  +    +  + + Y  
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560

Query: 504 LIDG 507
           LIDG
Sbjct: 561 LIDG 564



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 190/405 (46%), Gaps = 15/405 (3%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           P + ++ L  C  +N   D  +  F  ++  G+    Y  S +++      R+    V+L
Sbjct: 139 PSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRID---VIL 195

Query: 166 GRILRSC--FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
                 C         F S +K    E  +    AL  +  V    P +   N ++ GLC
Sbjct: 196 ENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLV----PKIVDCNKILKGLC 251

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                 VA + F+ M            PN VT++T+I+  CKE  +D+A  L+  M ++ 
Sbjct: 252 MGNQIGVASDFFDMMVRSGP------SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKG 305

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD+V Y+ +I G   A    E   LF   + +GV+ DVV FS IMD   + G + KA 
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +   M+  G++PN  TY+ LI+G C   ++  A  +F  +   G    V++Y++LI+ +
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK++++ +   LY  ML KG  P VV  + L  GL     ++ AL+ F +  +  +  + 
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y +N  IDG  +     + L+++  +   K   ++V+Y  L+ GL
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 7/279 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F  +L+   SP  +    ++ G   K +   T L +FK + S G+FPDI  +++
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDG-FCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN F + G V +   +L  I++    P+ VT+ ++I G C+     +A  LF   +   
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+  T+  LI+  C+ G    A+ +F  M     E      PN +TY+ +IDG  K  
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE------PNILTYSCLIDGYFKTE 709

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A EL+ KM  + ++P++V+Y+ +I G C      EA   F   + + + PDV+ + 
Sbjct: 710 NTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYG 769

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           +++   CK G++ +A  L + M+  G+ P+      L +
Sbjct: 770 ILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAE 808


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 220/422 (52%), Gaps = 16/422 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS-----LFKRLNSAGLFPDIY 143
           EAL + + M +    P  V+     +  +AK  H   ++S     + K L   GL PD+ 
Sbjct: 238 EALELTNDMEKQGLQPDMVT-----YKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLV 292

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+++LI   C+MG +     +   +L S F  N + ++ L+  LC   ++ EA  L  + 
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                +PD+ TY+ LI+GLC+ G    A+ L++EM   N  F     PN+  ++ I+ GL
Sbjct: 353 EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC-FNRIF-----PNSFAHSGILKGL 406

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C++G +  A+  F  +   N+ PDV  Y  +I G+    D  EA RL+  + D+ + P +
Sbjct: 407 CEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VTF+ ++   CKN K+ +A RLLE +   G+ P+  TY TL++ YC    I+   +L + 
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLE 526

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M        VV+Y  +I   CK + +EE++ L  +M +KG+ P  +TYNT+     +   
Sbjct: 527 MNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKD 586

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           + +A +L D+M  +++     TYN  IDGLC+ G V +A  +  +++D    L  V+Y  
Sbjct: 587 MRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTT 646

Query: 504 LI 505
           +I
Sbjct: 647 MI 648



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 212/405 (52%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+NIL   L      +  L L   +   GL PD+ T+ I+   F  +G +S    +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 165 LGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           + ++L      P+ VT+T LI G C    I EA  L         + +V  Y+ L++ LC
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    AL L  EM   N       +P+ VTY+ +I GLCK+G V +A +L+ +M    
Sbjct: 338 KRGQVDEALQLLYEMEANN------LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+   ++ +++G C     ++A+  F  ++   ++PDV  +++++D   K G +++A 
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           RL + +  + + P+  T+N+LI G+C   K+  AR+L  S++ +G     V+Y TL+N Y
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAY 511

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+  ++ +   L  EM  K I+PTVVTY  +  GL +  ++E +++L ++MR   +A D 
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQ 571

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  I   CK+  + +A EL   +     E    +YN LIDGL
Sbjct: 572 ITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 196/399 (49%), Gaps = 7/399 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +  Y +  +   P + +++IL   L K       + L+K +    +FP+ + HS 
Sbjct: 343 DEALQLL-YEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++   C+ G +S   +    ++ S   P+   +  +I G      + EA  L+ + R  A
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + T+N+LI G C+    + A  L E +     E      P+ VTY T+++  C+EG
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLE------PSAVTYTTLMNAYCEEG 515

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++K  EL L+M  ++I P VVTYT VI+G C      E+ +L  +M  +G+ PD +T++
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+   CK   M KA  LL+ M+   + P   TYN LIDG C    ++ A ++ VS++  
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                 V+Y T+I  +C   D + A+ ++ +M+ KG + ++  Y+ +   L +   +  A
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              F  M  + V+ D   +   ++   ++G V    EL 
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +++L   L K    D  L L   + +  L PD+ T+SILI+  CK G+V     +   + 
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   PN+   + ++KGLC +  + +A   F    +    PDV  YN +I+G  + G   
Sbjct: 389 FNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVE 448

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A+ L++ + +          P+ VT+N++I G CK   V +A+ L   +K   + P  V
Sbjct: 449 EAVRLYKRLRDK------AITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYT+++  +C   + N+   L +EM  + ++P VVT++V++  LCK  K++++ +LLE M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ P+  TYNT+I  +C    +  A +L   M  +       +YN LI+  C+  DV
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDV 622

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A  +   +  + I  T V Y T+          +RA+K+F +M           Y+  
Sbjct: 623 EDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682

Query: 470 IDGLCKSGFVLEA 482
           I+ LCK   + EA
Sbjct: 683 INRLCKRCLINEA 695



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 196/404 (48%), Gaps = 10/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L   +H D +  ++  +  +G      T SI+++  C   R     + 
Sbjct: 116 PSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLF 172

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +     F P+ V+F +++   C       A + F     +   PD ++YN LI+GL  
Sbjct: 173 LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 232

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDEN 283
            G    AL L  +M           +P+ VTY  +  G    G +  A+E+  KM  DE 
Sbjct: 233 AGSMEEALELTNDMEKQG------LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEG 286

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD+VTYT +I G C   +  EA RL  +++  G Q +V+ +SV++  LCK G++D+A 
Sbjct: 287 LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEAL 346

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +LL  M    + P+  TY+ LI G C   K+  A +L+  M  N    +  +++ ++   
Sbjct: 347 QLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL 406

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+   + +A   +  ++   ++P V  YN +  G  ++  VE A++L+  +R   +    
Sbjct: 407 CEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            T+N+ I G CK+  V+EA  L  +I+    E + V+Y  L++ 
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 7/313 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G + L    EA+ ++   LR     P + +FN L     KN+       L + +   GL 
Sbjct: 440 GYVKLGDVEEAVRLYKR-LRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLE 498

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P   T++ L+N +C+ G ++    +L  +      P  VT+T +IKGLC + ++ E+  L
Sbjct: 499 PSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQL 558

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               R     PD  TYNT+I   C+      A  L ++M   N E      P   TYN +
Sbjct: 559 LEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE------PTPATYNVL 612

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLC+ G V+ A  + + ++D NIN   V YT++I+  C   D   A ++F +M+++G 
Sbjct: 613 IDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +  +  +S +++ LCK   +++A     +M+  GV+P+   +  +++ +     +    +
Sbjct: 673 EVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFE 732

Query: 380 LFVSMESNGCMHD 392
           L   M   G +HD
Sbjct: 733 LLAVMIKFGLLHD 745



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 9/338 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A   FD ++ M    P V+ +NI+     K    +  + L+KRL    + P I T + 
Sbjct: 413 SDARMYFDSLI-MSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  FCK  +V     +L  I      P+AVT+T+L+   C E  I +   L  +  +  
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            EP V TY  +I GLC+      ++ L E+M A G         P+ +TYNTII   CK 
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG-------LAPDQITYNTIIQCFCKA 584

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             + KA EL   M   N+ P   TY  +I G C   D  +A R+ + + D+ +    V +
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++   C  G   +A ++   M+ +G   +   Y+ +I+  C    I+ A+  F  M S
Sbjct: 645 TTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLS 704

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +G   D   +  ++N + +   V     L + M+  G+
Sbjct: 705 DGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 10/256 (3%)

Query: 259 IIDGLCKEG----FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND-WNEAKRLFIE 313
           ++D + +E      V  A  + +KMK++N+ P + TY S++    + +  W+    ++ +
Sbjct: 85  VLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWD----VYND 140

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           + D G      T S+I+D LC   +   A   L     +   P+  ++NT++  YC    
Sbjct: 141 IKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGL 200

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            D A+  F  M   G + D  SYN LI+       +EEAL L ++M  +G++P +VTY  
Sbjct: 201 ADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKI 260

Query: 434 LFLGLFEIHQVERALKLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +  G   +  +  A ++  +M  +  +  D  TY   I G C+ G + EAL L R +  S
Sbjct: 261 VAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSS 320

Query: 493 KYELNIVSYNCLIDGL 508
            ++LN++ Y+ L+  L
Sbjct: 321 GFQLNVILYSVLLSSL 336


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 220/420 (52%), Gaps = 9/420 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            + L +   M R   +P  V+ +N+L   L+K   ++    L   +   GL    YT++ 
Sbjct: 251 QQGLDLLSEMQRRGCAPNDVT-YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +   G ++    +   ++    +P   T+ S I GLC   R+ +A    +      
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +YNTLI G CR G+ + A  LF+E+ +      +   P  VTYNT++DGLC++G
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS------IYLFPTIVTYNTLLDGLCRQG 423

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A++L ++M +E I PD+VTYT ++ G C     + A+  F EM+ +G++ D   ++
Sbjct: 424 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 483

Query: 328 V-IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             I+ EL K G   +A  L E M+ +G  P+   YN ++DG C    ++ A +L   M S
Sbjct: 484 TRIVGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVS 542

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G + D V+Y ++I+ + +N  + +   ++ EMLSKG+ P+VVTY  L  G     ++ER
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A   F EM+   +  +  TYN+ I+GLCK   + +A   F  + +     N  SY  LI+
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 178/362 (49%), Gaps = 6/362 (1%)

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI  + K   V     V  ++++S  +P+      +++ L  +  + +A  ++     F
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +P + TYNTL++  C+ G     L+L  EM          C PN VTYN +I+GL K+
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSKK 282

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  ++AK L  +M    +     TY  +I G+       EA  L  EM+ +G  P V T+
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +  +  LCK G+M  A + L  M+   + P+  +YNTLI GYC    +  A  LF  + S
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                 +V+YNTL++  C+  ++E A  L  EM+++GI P +VTY  L  G  ++  +  
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A + FDEM    +  D+Y Y   I G  K G    A  L   +    +  +++ YN ++D
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 507 GL 508
           GL
Sbjct: 523 GL 524


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 210/419 (50%), Gaps = 7/419 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +   M +     P V +++ L     K    +  LSLF  +   G   D+ T+S+
Sbjct: 580 DEAVSLLREMEK-QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +INC CK   V     V GR+      P    + +L+  L  + +I  A  +F + +  +
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS 698

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD F YN ++NGL ++     A  L + M N N        P+  TY +++DGL K G
Sbjct: 699 LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQN------ILPDLFTYTSLLDGLGKSG 752

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  +F KM +E   PDVV YTS++         + A  +F  M  +   PDVVT+S
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYS 812

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D L K G++++A    E  I +G  PN   Y++LID +     +D A +LF  M+  
Sbjct: 813 SLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRR 872

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  ++V+YN L++   K   +  A  L  EM   G  P +VTYN L  G+ ++  V+ A
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEA 932

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              F  M+   +  D  T+ + I+ L K   +LEA ELF ++ +  Y  ++V+YN LID
Sbjct: 933 ESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + + M + H   P V ++  L   L K    D  +SL + +   G  P + T+S 
Sbjct: 545 DEAVKLLEVM-KKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+  F K  +      +   ++R     +  T++ +I  LC    + +A  +F + +   
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP +  Y TL++ L +      AL +F E+   +        P+T  YN +++GL K  
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS------LVPDTFVYNIMVNGLVKSN 717

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A +L   MK++NI PD+ TYTS++ G   +    EA  +F +M ++G +PDVV ++
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD L K GK+  A  +   M  +   P+  TY++LID      +++ A   F +  S 
Sbjct: 778 SLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISK 837

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  +V  Y++LI+ + K   V+ AL L+ EM  +   P +VTYN L  GL +  ++  A
Sbjct: 838 GCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVA 897

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            KL +EM +     D  TYN  IDG+ K G V EA   F+ +++     +++++  LI+ 
Sbjct: 898 EKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIES 957

Query: 508 L 508
           L
Sbjct: 958 L 958



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 200/402 (49%), Gaps = 7/402 (1%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            E+L +FD M+R       VS+++++  CL K+   D  L +F R+   G+ P +  +  L
Sbjct: 616  ESLSLFDEMVR-KGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTL 674

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            ++   K  ++     +   +  S   P+   +  ++ GL   +R+ EA  L    +    
Sbjct: 675  LSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI 734

Query: 209  EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             PD+FTY +L++GL ++G    A N+F +M     E      P+ V Y +++D L K G 
Sbjct: 735  LPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHE------PDVVAYTSLMDVLGKGGK 788

Query: 269  VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +  A  +F  M  +   PDVVTY+S+I          EA   F   + +G  P+V  +S 
Sbjct: 789  LSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            ++D   K G +D+A  L E M  R   PN  TYN L+ G     +++ A KL   ME  G
Sbjct: 849  LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908

Query: 389  CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            C+ D+V+YN LI+   K   V+EA S +  M  KGI P V+T+ +L   L ++ ++  A 
Sbjct: 909  CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968

Query: 449  KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            +LFD M          TYN  ID L ++G V EA  +F  ++
Sbjct: 969  ELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 192/395 (48%), Gaps = 34/395 (8%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++AL +F  M +     P + ++  L   L K++  D  L +F  L  + L PD + ++I
Sbjct: 650  DQALDVFGRM-KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            ++N   K  RV     ++  +      P+  T+TSL+ GL    R+ EA  +FTK     
Sbjct: 709  MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN---------------GEFGVV---- 248
             EPDV  Y +L++ L + G    AL +F  MA                  G+ G V    
Sbjct: 769  HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 249  ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      C PN   Y+++ID   K+G VD+A ELF +M+     P++VTY +++ G 
Sbjct: 829  YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 299  CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
              A   N A++L  EM   G  PD+VT+++++D + K G +D+A    + M  +G+ P+ 
Sbjct: 889  AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948

Query: 359  YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             T+ +LI+     DK+  A +LF SME  G    VV+YN LI+   +   V EA  ++ E
Sbjct: 949  ITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008

Query: 419  MLSKGIKPTVVTYNTL--FLGLFE--IHQVERALK 449
            M  KG  P  +T   +   L + E   H +E  L+
Sbjct: 1009 MKVKGCMPDGITIGIMKRILSVREQQFHALEEGLR 1043



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 214/499 (42%), Gaps = 95/499 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NI+   L K         LF  L   G  PD++T++ LI+   K G++     +
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484

Query: 165 LGRIL------------------------RSCFTPN-------AVTFTSLIKGLCAESRI 193
           +  ++                        R+   P+        +T+ +L+        +
Sbjct: 485 IKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHV 544

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----- 248
            EA  L    +   C P V TY TL++GL + G    A++L  EM     E  VV     
Sbjct: 545 DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604

Query: 249 ------------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                                   C  +  TY+ +I+ LCK   VD+A ++F +MK+E +
Sbjct: 605 MASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGM 664

Query: 285 N-----------------------------------PDVVTYTSVIRGFCYANDWNEAKR 309
                                               PD   Y  ++ G   +N  +EA +
Sbjct: 665 EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK 724

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L   M +Q + PD+ T++ ++D L K+G++++A  +   M   G  P+   Y +L+D   
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K+ HA  +F +M    C+ DVV+Y++LI+   K   VEEA   +   +SKG  P V 
Sbjct: 785 KGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVG 844

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            Y++L     +   V+RAL+LF+EM+R     +  TYNN + GL K+G +  A +L   +
Sbjct: 845 VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904

Query: 490 RDSKYELNIVSYNCLIDGL 508
                  ++V+YN LIDG+
Sbjct: 905 EKVGCVPDLVTYNILIDGV 923



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 203/458 (44%), Gaps = 42/458 (9%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           Q D++L     A C F +  +       V ++ ++   LA  +  D V+ +   +   G 
Sbjct: 159 QKDLHL-----AKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGH 213

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
              ++  + L+  F     VS    +  ++      P+   +  +++ L        A  
Sbjct: 214 RISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVI 273

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +F K   F  +PD  T+   ++   R+G    A    +EM            P   T+  
Sbjct: 274 VFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG------IDPGVHTFTV 327

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +ID L K G +D+A + F  MK+   +P+VVTYT+++ G   A    EA  +F+EM +  
Sbjct: 328 LIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENN 387

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD + ++ ++D L K G+ D A  L + M  RG+ PN  TYN +I       +   A 
Sbjct: 388 CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAW 447

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK------------- 425
           +LF  ++  G + DV +YNTLI+   K   +++ L++  EM+ KG +             
Sbjct: 448 QLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEG 507

Query: 426 -----------PTV-------VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
                      P++       +TYNTL         V+ A+KL + M+++       TY 
Sbjct: 508 TIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYT 567

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             +DGL K+G + EA+ L R +     E ++V+Y+ L+
Sbjct: 568 TLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 122/240 (50%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V  A E+F +MK    NP    Y  V+        ++ A  +F ++    +QPD  TF +
Sbjct: 233 VSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +    ++G++D A+  ++ MI  G++P  +T+  LID    +  ID A K F  M++  
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  +VV+Y TL+N   K   +EEA  ++ EM      P  + YNTL  GL +  + + A 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LF EM+   +  +  TYN  I  L K+G   EA +LF  +++     ++ +YN LID L
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 212/406 (52%), Gaps = 8/406 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N++   L K    D  +  F+ +      PD++T+S L+N  CK  RV     +
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN VTF  LI  L     +  AA L     +  C P+  TYNTLI+GLC 
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+L E+M +        C PN VTY TII+GL K+   +    + + M++   
Sbjct: 292 KGKLDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 345

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +   Y+S+I G         A RL+ EM ++G +P+VV +   +D LC++ K D+A  
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAED 405

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ M+ +G  PN +TY++L+ G+        A  ++  M S    H+VV  + L+N  C
Sbjct: 406 ILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLC 465

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA--D 462
           ++  + EAL++++ ML +G+KP VV Y+++  GL ++  V++ LKLF EM+     +  D
Sbjct: 466 ESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPD 525

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN   + LC+   +  A++L  ++ D   + + ++ N  ++ L
Sbjct: 526 VVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 179/337 (53%), Gaps = 8/337 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F PN +T+  +IK LC   +I  A   F +  +  C PDVFTY+TL+NGLC+      A+
Sbjct: 170 FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 229

Query: 233 NLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            L +EM A G       C PN VT+N +ID L K G + +A +L   M  +   P+ VTY
Sbjct: 230 FLLDEMQAEG-------CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTY 282

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            ++I G C     ++A  L  +M+     P+ VT+  I++ L K  + +    +L  M  
Sbjct: 283 NTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 342

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           RG   N Y Y++LI G     K ++A +L+  M   GC  +VV Y   I+  C+++  +E
Sbjct: 343 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 402

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  +  EMLSKG  P   TY++L  G F+    ++A+ ++ EM    +  +    +  ++
Sbjct: 403 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 462

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLC+SG + EAL ++  +     + ++V+Y+ +I GL
Sbjct: 463 GLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 499



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 183/347 (52%), Gaps = 8/347 (2%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV---FACEPDVFTYNTLIN 220
           VL R+ R         F  + K  C ++ +   A  F  HR+     C+  V ++N+++N
Sbjct: 87  VLDRMKREGRVLTETIFILIFKA-CGKAHLPGEAVNFF-HRMANDLHCKQTVKSFNSVLN 144

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            + + G    A   +  +   N + G   +PN +TYN II  LCK G +D+A + F +M 
Sbjct: 145 VIIQEGDFSYAFKFYLHVFGANSK-GF--QPNLLTYNLIIKALCKLGQIDRAVDTFREMP 201

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +N NPDV TY++++ G C     +EA  L  EM  +G  P+ VTF+V++D L KNG + 
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A++L++ M  +G  PN  TYNTLI G CL  K+D A  L   M S+ C+ + V+Y T+I
Sbjct: 262 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 321

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N   K +  E+ + +   M  +G K     Y++L  GLF+  + E A++L+ EM      
Sbjct: 322 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 381

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   Y  FIDGLC+     EA ++ + +    +  N  +Y+ L+ G
Sbjct: 382 PNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 428



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 208/420 (49%), Gaps = 30/420 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M      P PV+ FN+L   L+KN        L   +   G  P+  T++ 
Sbjct: 226 DEAVFLLDEMQAEGCLPNPVT-FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 284

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  G++     +L +++ S   PN VT+ ++I GL  + R  +   +        
Sbjct: 285 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 344

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + + + Y++LI+GL + G +  A+ L++EMA         CKPN V Y   IDGLC++ 
Sbjct: 345 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG------CKPNVVVYGAFIDGLCRDE 398

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A+++  +M  +   P+  TY+S+++GF    D  +A  ++ EMM Q ++ +VV  S
Sbjct: 399 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCS 458

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V+++ LC++G++ +A  +   M+  G+ P+   Y+++I G C    +D   KLF  M+  
Sbjct: 459 VLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 518

Query: 388 --GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT------------ 433
                 DVV+YN L N  C+  ++  A+ L + ML +G  P  +T N             
Sbjct: 519 EPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPP 578

Query: 434 ----LFLGLFEIHQVER-----ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
               LFL    +  ++R     AL++ +EM    +  +  T++  I   CK   + E ++
Sbjct: 579 QDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETID 638


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 210/398 (52%), Gaps = 8/398 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L   L ++++++   S ++++     F +  + S L+ CF +M +      VL  +L+
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
             F  N   +  L+KGLC      +A +L  + R  +  PDV +YNT+I G C       
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL L  EM  G+G     C  + VT+  +ID  CK G +D+A  L  +MK + +  D++ 
Sbjct: 196 ALQLANEM-QGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YTS+IRGFC   + +  K LF E++++G  P  +T++ ++   CK G++ +AS + E M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RGV PN YTY  LIDG C   K   A +L   M       +VV+YN +IN  CK+  V 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN--HVAADTYTYNN 468
           +AL +   M  +  +P  +TYN+L  GL     ++ A KL   M ++  +   D  ++N 
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            I GLCK   + +AL+++  + +     +IV+ N L++
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLN 467



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 208/405 (51%), Gaps = 10/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++NIL   L +N  +   +SL + +    L PD+ +++ +I  FC+   +     +  
Sbjct: 142 VYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLAN 201

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  S  + + VT+  LI   C   ++ EA  L  + +    E D+  Y +LI G C  G
Sbjct: 202 EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261

Query: 227 HTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                  LF+E +  G+        P  +TYNT+I G CK G + +A E+F  M +  + 
Sbjct: 262 ELDRGKALFDEVLERGD-------SPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+V TYT +I G C      EA +L   M+ +  +P+VVT+++I+++LCK+  +  A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWY 403
           +ELM  R   P+  TYN+L+ G C    +D A KL   M  +S+    DV+S+N LI+  
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   + +AL +Y  ++ K     +VT N L     +   V +A++L+ ++  + +  ++
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   IDG CK+G +  A  L   +R S+   ++  YNCL+  L
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSL 539



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 199/424 (46%), Gaps = 43/424 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ IL     K    D  + L K +   GL  D+  ++ LI  FC  G +  G  +   +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L    +P A+T+ +LI+G C   R+ EA+ +F         P+V+TY  LI+GLC  G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L   M   + E      PN VTYN II+ LCK+  V  A E+   MK     PD 
Sbjct: 334 KEALQLLNLMLQKDEE------PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +TY S++ G C   D +EA +L   M+       PDV++F+ ++  LCK  ++ +A  + 
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447

Query: 347 ELMI------------------------------WRGVN-----PNTYTYNTLIDGYCLT 371
           +L++                              W+ ++     PN+ TY T+IDG+C T
Sbjct: 448 DLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             ++ A+ L   M  +     V  YN L++  CK   +++A  L+ EM      P V+++
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N +  G  +   ++ A  L   M    ++ D +TY+  I+   K G++ EA+  F  + D
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMID 627

Query: 492 SKYE 495
           S +E
Sbjct: 628 SGFE 631



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 201/412 (48%), Gaps = 8/412 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R +   P V S+N +     + K  +  L L   +  +G    + T  ILI+ FCK G+
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +L  +       + + +TSLI+G C    +    ALF +       P   TYNT
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI G C+ G    A  +FE M     E GV  +PN  TY  +IDGLC  G   +A +L  
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMM----ERGV--RPNVYTYTGLIDGLCGVGKTKEALQLLN 341

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M  ++  P+VVTY  +I   C  +   +A  +   M  +  +PD +T++ ++  LC  G
Sbjct: 342 LMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKG 401

Query: 338 KMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            +D+AS+LL LM+      +P+  ++N LI G C  +++  A  ++  +       D+V+
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVT 461

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            N L+N   K+ DV +A+ L+ ++ +  I P   TY T+  G  +   +  A  L  +MR
Sbjct: 462 TNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMR 521

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            + +    + YN  +  LCK G + +A  LF  ++      +++S+N +IDG
Sbjct: 522 LSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 143/257 (55%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N   YN ++ GLC+     KA  L  +M+  ++ PDVV+Y +VIRGFC   +  +A +L 
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM   G    +VT+ +++D  CK GKMD+A  LL+ M  +G+  +   Y +LI G+C  
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            ++D  + LF  +   G     ++YNTLI  +CK   ++EA  ++  M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  GL  + + + AL+L + M +     +  TYN  I+ LCK   V +ALE+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 492 SKYELNIVSYNCLIDGL 508
            +   + ++YN L+ GL
Sbjct: 381 RRTRPDNITYNSLLGGL 397



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 191/438 (43%), Gaps = 40/438 (9%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD +L    SP  ++ +N L     K         +F+ +   G+ P++YT++ LI+  
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C +G+      +L  +L+    PN VT+  +I  LC +S + +A  +    +     PD 
Sbjct: 328 CGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC-------- 264
            TYN+L+ GLC  G    A  L   M   +        P+ +++N +I GLC        
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISFNALIHGLCKGNRLHQA 443

Query: 265 ---------------------------KEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                                      K G V+KA EL+ ++ +  I P+  TYT++I G
Sbjct: 444 LDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDG 503

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC     N AK L  +M    + P V  ++ ++  LCK G +D+A RL E M      P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPD 563

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             ++N +IDG      I  A  L V M   G   D+ +Y+ LIN + K   ++EA+S + 
Sbjct: 564 VISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +M+  G +P     +++        + ++  +   ++    V  D       +D +C S 
Sbjct: 624 KMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSS 683

Query: 478 FVLEALELFRAIRDSKYE 495
             ++  +    + D K E
Sbjct: 684 GNMDIAKRLLRVADDKEE 701



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 7/278 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A+++F++  +  G         +   N ++  L +    + A   + KM + +   + V+
Sbjct: 57  AVSVFQQAVDSGGSL-------SFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVS 109

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
            + ++  F        A  +   M+ +G   +V  +++++  LC+N +  KA  LL  M 
Sbjct: 110 LSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMR 169

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
              + P+  +YNT+I G+C   +++ A +L   M+ +GC   +V++  LI+ +CK   ++
Sbjct: 170 QNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMD 229

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA+ L  EM  KG++  ++ Y +L  G  +  +++R   LFDE+     +    TYN  I
Sbjct: 230 EAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G CK G + EA E+F  + +     N+ +Y  LIDGL
Sbjct: 290 RGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 212/417 (50%), Gaps = 7/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +   M R +  PP   ++N +   L K    +    L   + + GLFP+  T +IL
Sbjct: 215 EAIRVLGKM-RDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNIL 273

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +   C++G +     V+  + ++   P+A T+  +I G C + RI EA  L  +      
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TYNTLING    G +     L EEM       G   KPN+VTYN ++    K+G 
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEME------GRGMKPNSVTYNVMVKWFVKKGK 387

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+  +   KM++    PD+VTY ++I   C     +EA RL  EM  +G++ D VT + 
Sbjct: 388 MDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNT 447

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+  K+D+A  LL     RG   +  +Y TLI GY   +K   A +L+  M+   
Sbjct: 448 MLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKE 507

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            +  +++YN++I   C+     +A+    E+L  G+ P  +TYNT+  G  +  QVE+A 
Sbjct: 508 IIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAF 567

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  ++M   +   D  T N  + GLCK G + +AL+LF        +++ VSYN +I
Sbjct: 568 QFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTII 624



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 208/401 (51%), Gaps = 6/401 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +SFNIL         +   + +  ++   G  PD  T++ +++  CK GR++    +L  
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +      PN  TF  L+ G C    + EAA +       +  PD +TYN +I+G C+ G 
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L EEM N      +   P+ VTYNT+I+G  + G  ++  +L  +M+   + P+
Sbjct: 318 IAEAMRLREEMEN------LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPN 371

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VTY  +++ F      +E  +   +M + G  PD+VT++ ++   CK GKMD+A RL++
Sbjct: 372 SVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G+  +  T NT++   C   K+D A  L  S    G   D VSY TLI  Y K++
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHE 491

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
              +AL L+ EM  K I P+++TYN++  GL ++ +  +A+   DE+  + +  D  TYN
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I G C+ G V +A +    + +  ++ ++V+ N L+ GL
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGL 592



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 210/423 (49%), Gaps = 54/423 (12%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP--------NAVT 179
            +F R+   G+ P + T + L+N   +    SH      R+ ++ FT         N  +
Sbjct: 145 QIFNRMKRLGMQPTLLTCNTLLNALVRFPS-SHSI----RLSKAVFTDFIKIGVKINTNS 199

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           F  LI G C E+R  EA  +  K R + C PD  TYNT+++GLC+ G    A +L  +M 
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
           N  G F     PN  T+N ++ G C+ G++ +A  +   M   ++ PD  TY  +I GFC
Sbjct: 260 N-KGLF-----PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 EA RL  EM +  + PDVVT++ +++   ++G  ++  +L+E M  RG+ PN+ 
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TYN ++  +    K+D   K    ME +GC+ D+V+YNTLI+W+CK   ++EA  L  EM
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 420 LSKGIKPTVVT-----------------------------------YNTLFLGLFEIHQV 444
             KG+K   VT                                   Y TL +G F+  + 
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
            +AL+L+DEM+   +     TYN+ I GLC+ G   +A++    + +S    + ++YN +
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553

Query: 505 IDG 507
           I G
Sbjct: 554 IHG 556



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 197/387 (50%), Gaps = 6/387 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N++     K       + L + + +  L PD+ T++ LIN   + G    GF +
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN+VT+  ++K    + ++ E      K     C PD+ TYNTLI+  C+
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM    G  G+  K + VT NT++  LC+E  +D+A +L    +    
Sbjct: 420 VGKMDEAFRLMDEM----GRKGL--KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY 473

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V+Y ++I G+      ++A RL+ EM ++ + P ++T++ ++  LC+ GK ++A  
Sbjct: 474 FVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L+ ++  G+ P+  TYNT+I GYC   +++ A +    M       DVV+ NTL+   C
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC 593

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +E+AL L++  +SKG     V+YNT+ L L +  +   A  L +EM    +  D Y
Sbjct: 594 KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRD 491
           TYN  + GL  +G + +A E    I +
Sbjct: 654 TYNAILGGLTDAGRMKDAEEFISKIAE 680



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 18/373 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N++     K    D V    +++  +G  PDI T++ LI+  CK+G++   F +
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  + R     + VT  ++++ LC E ++ EA  L    R      D  +Y TLI G  +
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFK 489

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L++EM     E  ++  P+ +TYN++I GLC+ G  ++A +   ++ +  +
Sbjct: 490 HEKASQALRLWDEMK----EKEII--PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY ++I G+C      +A +   +M+++  +PDVVT + ++  LCK G ++KA +
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L    I +G + +  +YNT+I   C   +   A  L   ME      D  +YN ++    
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLT 663

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               +++A    S++  KG           FL L +  Q  R  ++  E   N +A    
Sbjct: 664 DAGRMKDAEEFISKIAEKG------KSENQFLELGK-RQDARTSEIPQEPHPNAIA---- 712

Query: 465 TYNNFIDGLCKSG 477
            Y+N I+ LC  G
Sbjct: 713 -YSNKINELCSQG 724



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEI---HQVERALKLFDEMRRNHVAADTYTYN 467
           +A  +++ M   G++PT++T NTL   L      H +  +  +F +  +  V  +T ++N
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFN 201

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I G C      EA+ +   +RD     + ++YN ++DGL
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGL 242


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S N L   L+K+      LS FK +  AGL P ++T++++I C  + G +     +
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+ VT+ SLI G      +  A ++F + +   CEPDV TYN+LIN  C+
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A     E  +G  + G+  +PN VTY+T+ID  CK G + +A + F+ M    +
Sbjct: 334 FERIPQAF----EYLHGMKQRGL--QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGL 387

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TYTS+I   C   D NEA +L  EM   GV  ++VT++ ++D LC++G+M +A  
Sbjct: 388 QPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEE 447

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   ++  G   N   Y +L  GY     ++ A  +   M       D++ Y T I   C
Sbjct: 448 LFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLC 507

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +  ++E+++++  EM+  G+      Y TL    F++ +   A+ L  EM+   +     
Sbjct: 508 RQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVV 567

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   IDGLCK G V +A+  F  +  +  + NI+ Y  LIDGL
Sbjct: 568 TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    F+ LF  L      +     F ++N   + P + + + L++   K  +       
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +  +P+  T+  +I  L  E  +  A +LF + +     PD+ TYN+LI+G  +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+++FEEM +        C+P+ +TYN++I+  CK   + +A E    MK   +
Sbjct: 299 VGMLTGAVSVFEEMKDAG------CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTY+++I  FC A    EA + F++M+  G+QP+  T++ ++D  CK G +++A +
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   GVN N  TY  L+DG C   ++  A +LF ++   G   +   Y +L + Y 
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K +E+A+ +  EM  K +KP ++ Y T   GL   +++E ++ +  EM    + A++Y
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   ID   K G   EA+ L + ++D   ++ +V+Y  LIDGL
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 197/403 (48%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L     K       +S+F+ +  AG  PD+ T++ LINCFCK  R+   F  
Sbjct: 284 PDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEY 343

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +    PN VT+++LI   C    ++EA   F        +P+ FTY +LI+  C+
Sbjct: 344 LHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCK 403

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L  EM             N VTY  ++DGLC++G + +A+ELF  +     
Sbjct: 404 IGDLNEAFKLESEMQQAGVNL------NIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +   YTS+  G+  A    +A  +  EM  + ++PD++ +   +  LC+  +++ +  
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++  M+  G+  N+Y Y TLID Y    K   A  L   M+  G    VV+Y  LI+  C
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V++A+  +  M   G++P ++ Y  L  GL +   +E A  LF+EM    ++ D  
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            Y + IDG  K G   EAL L   + +   EL++ +Y  LI G
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWG 680



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 181/407 (44%), Gaps = 43/407 (10%)

Query: 94  FDYM--LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           F+Y+  ++     P V +++ L     K          F  +   GL P+ +T++ LI+ 
Sbjct: 341 FEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDA 400

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--------- 202
            CK+G ++  F +   + ++    N VT+T+L+ GLC + R+ EA  LF           
Sbjct: 401 NCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLN 460

Query: 203 HRVFAC--------------------------EPDVFTYNTLINGLCRTGHTIVALNLFE 236
            +++                            +PD+  Y T I GLCR      ++ +  
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIR 520

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM +           N+  Y T+ID   K G   +A  L  +M+D  I   VVTY  +I 
Sbjct: 521 EMMDCG------LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLID 574

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C      +A R F  M   G+QP+++ ++ ++D LCKN  +++A  L   M+ +G++P
Sbjct: 575 GLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISP 634

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +   Y +LIDG         A  L   M   G   D+ +Y +LI  + +   V+ A SL 
Sbjct: 635 DKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLL 694

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            EML KGI P  V    L    +E+  +  AL L D+M R  + + T
Sbjct: 695 DEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGT 741



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 142/261 (54%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC+P    ++T+ + L   G +++A++ F KM    + P V +   ++     ++    A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
              F +M+  G+ P V T+++++  L + G ++ A  L E M  +G+ P+  TYN+LIDG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y     +  A  +F  M+  GC  DV++YN+LIN +CK + + +A      M  +G++P 
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY+TL     +   +  A K F +M R  +  + +TY + ID  CK G + EA +L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            ++ +   LNIV+Y  L+DGL
Sbjct: 416 EMQQAGVNLNIVTYTALLDGL 436



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 6/285 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  LF    K K  +  + + + +N   L PD+  +   I   C+   +     V+  ++
Sbjct: 464 YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
               T N+  +T+LI       +  EA  L  + +    +  V TY  LI+GLC+ G   
Sbjct: 524 DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQ 583

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A+  F+ M   NG      +PN + Y  +IDGLCK   +++AK LF +M D+ I+PD +
Sbjct: 584 QAVRYFDHMTR-NG-----LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            YTS+I G     +  EA  L   M++ G++ D+  ++ ++    + G++  A  LL+ M
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           + +G+ P+      L+  Y     I+ A  L   M   G +   +
Sbjct: 698 LRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 6/203 (2%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
            ++L + +   G+   + T+ +LI+  CK+G V         + R+   PN + +T+LI 
Sbjct: 550 AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID 609

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           GLC    + EA  LF +       PD   Y +LI+G  + G+   AL+L   M     E 
Sbjct: 610 GLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMV----EI 665

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           G+  + +   Y ++I G  + G V  AK L  +M  + I PD V    ++R +    D N
Sbjct: 666 GM--ELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDIN 723

Query: 306 EAKRLFIEMMDQGVQPDVVTFSV 328
           EA  L  +M  +G+    +  +V
Sbjct: 724 EALALHDDMARRGLISGTIDITV 746



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 54/121 (44%)

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           N C      ++TL N       +EEA   + +M    + P V + N L   L +  +   
Sbjct: 175 NVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGL 234

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL  F +M    ++   +TYN  I  L + G +  A  LF  ++      +IV+YN LID
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 507 G 507
           G
Sbjct: 295 G 295


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 197/374 (52%), Gaps = 9/374 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S N +   L K      V S++K +    +  ++ T  ++IN  CK+G+      V+  +
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
               F+P+ +T+ ++I G C   ++ +A AL  +       P+  T+N LI+G CR  + 
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  +FEEM           +PN VTYN++I+GLC  G +D+A  L  KM    + P+V
Sbjct: 316 TAAKKVFEEMQRQG------LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY ++I GFC      EA+ +  ++  +G+ P+V+TF+ ++D   K G+MD A  L  +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  GV PN  TYN LI G+C    +  ARKL   ME NG   D+V+YN L++  CK  +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 409 VEEALSLYSEML---SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             +A+ L  EM     KG +  +VTYN L  G     ++E A +L +EM    +  +  T
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549

Query: 466 YNNFIDGLCKSGFV 479
           Y+   D + + GF+
Sbjct: 550 YDILRDEMMEKGFI 563



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 207/400 (51%), Gaps = 12/400 (3%)

Query: 113 LFGCLAKNKHYD--TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           L    AKN HY   T+      L S G    I    +L+  + K G +        R   
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIV-DMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
             F  +A++   ++  L  E RI    +++ +        +V T++ +INGLC+ G    
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A ++ E+M      +G    P+ +TYNTIIDG CK G + KA  L  +M  + I+P+ +T
Sbjct: 248 AGDVVEDMK----AWGF--SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           +  +I GFC   +   AK++F EM  QG+QP+VVT++ +++ LC NGK+D+A  L + M 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G+ PN  TYN LI+G+C    +  AR++   +   G   +V+++NTLI+ Y K   ++
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A  L S ML  G+ P V TYN L +G      V+ A KL  EM  N + AD  TYN  +
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 471 DGLCKSGFVLEALELFRA---IRDSKYELNIVSYNCLIDG 507
           D LCK G   +A+ L      +       NIV+YN LI G
Sbjct: 482 DALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKG 521



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 198/399 (49%), Gaps = 9/399 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           ++L     KN   D  L  F R    G      + + ++    K GR+     V   ++R
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
                N VTF  +I GLC   +  +A  +    + +   P V TYNT+I+G C+ G    
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  L +EM            PN +T+N +IDG C++  V  AK++F +M+ + + P+VVT
Sbjct: 283 ADALLKEMVAKR------IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S+I G C     +EA  L  +M   G++P+VVT++ +++  CK   + +A  +L+ + 
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RG+ PN  T+NTLID Y    ++D A  L   M   G   +V +YN LI  +C+  +V+
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM---RRNHVAADTYTYN 467
           EA  L  EM   G+K  +VTYN L   L +  +  +A++L DEM    +    A+  TYN
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYN 516

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             I G C  G + EA  L   + +     N  +Y+ L D
Sbjct: 517 VLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 230/498 (46%), Gaps = 35/498 (7%)

Query: 21  RCNFSSSFP-------HTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRAS-LKKFLKE 72
           RC  S+ FP       +T+ P SS +    +  + T       +L  K   S LK  +KE
Sbjct: 12  RC-LSTRFPSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKE 70

Query: 73  RCKSSGQGDI--NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
              SS    +  +   P+  LC F +  +   +   V  F  L   LA  K+Y+ + +L 
Sbjct: 71  TNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALL 130

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
                          S   N       + H   VLG    S    N++    L+      
Sbjct: 131 --------------DSFAKNAHYSNSTIFHSLSVLG----SWGCANSIIVDMLVWAYVKN 172

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
             +  A   F +   +       + N ++  L + G   V  ++++EM       GV   
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR--RIGV--- 227

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            N VT++ +I+GLCK G   KA ++   MK    +P V+TY ++I G+C A    +A  L
Sbjct: 228 -NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADAL 286

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             EM+ + + P+ +TF++++D  C++  +  A ++ E M  +G+ PN  TYN+LI+G C 
Sbjct: 287 LKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS 346

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+D A  L   M   G   +VV+YN LIN +CK K ++EA  +  ++  +G+ P V+T
Sbjct: 347 NGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +NTL     +  +++ A  L   M    V  +  TYN  I G C+ G V EA +L + + 
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466

Query: 491 DSKYELNIVSYNCLIDGL 508
            +  + ++V+YN L+D L
Sbjct: 467 GNGLKADLVTYNILVDAL 484



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 143/300 (47%), Gaps = 44/300 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K        +L K + +  + P+  T +ILI+ FC+   V+    V
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    PN VT+ SLI GLC+  ++ EA  L  K      +P+V TYN LING C+
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  L    EM +  G+ G+   PN +T+NT+ID   K G +D A  L   M D  +
Sbjct: 382 KK----MLKEAREMLDDIGKRGLA--PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG------- 337
            P+V TY  +I GFC   +  EA++L  EM   G++ D+VT+++++D LCK G       
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495

Query: 338 -------------------------------KMDKASRLLELMIWRGVNPNTYTYNTLID 366
                                          K+++A+RLL  M+ +G+ PN  TY+ L D
Sbjct: 496 LLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 127/248 (51%), Gaps = 10/248 (4%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F+ M R     P V ++N L   L  N   D  L L  +++  GL P++ T++ LIN F
Sbjct: 321 VFEEMQR-QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK   +     +L  I +    PN +TF +LI       R+ +A  L +        P+V
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LI G CR G+   A  L +EM  GNG      K + VTYN ++D LCK+G   KA
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEM-EGNG-----LKADLVTYNILVDALCKKGETRKA 493

Query: 273 KELFLKM---KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             L  +M   + +    ++VTY  +I+GFC      EA RL  EM+++G+ P+  T+ ++
Sbjct: 494 VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553

Query: 330 MDELCKNG 337
            DE+ + G
Sbjct: 554 RDEMMEKG 561


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 205/430 (47%), Gaps = 14/430 (3%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +P EA       L      P +S FN L   L +  +   +  LF  +  A + PD+ T+
Sbjct: 110 SPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTY 169

Query: 146 SILINCFCKMGRVSHGFVVLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
            IL+N  CK G V     VL R+    S   P+     +++ GLC   R+ + A +F   
Sbjct: 170 GILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQ-AIIFVDE 228

Query: 204 R---VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
           R   V  C P+  TYN L +  CR G   +A  +   M     + GV   PN +T NTII
Sbjct: 229 RMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARME----KEGVA--PNVITMNTII 282

Query: 261 DGLCKEGFVDKAKELFLKMKD--ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            GLC+ G V  A E F + +        + VTY+++   F + N+ + A  LF EM D G
Sbjct: 283 GGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHG 342

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +PD V +  ++  L + G++  A      M   G   +   YN LI G+C   K+  A 
Sbjct: 343 HRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAY 402

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L   M+  G   DV +YNTL++  CK  D      L   M+  G +P+VVT+ TL  G 
Sbjct: 403 ELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGY 462

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +  + + AL++F  M    +  +T  YN  ID LCKS  V  A++LF  +R+     N+
Sbjct: 463 CKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANV 522

Query: 499 VSYNCLIDGL 508
            +YN L+ GL
Sbjct: 523 TTYNALLKGL 532



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 192/428 (44%), Gaps = 44/428 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG--LFPDIYTHSILINCFCKMGRVSHGF 162
           P V ++ IL   L K+ H    L +  R++S G  + PDI   + +++  CK+GR+    
Sbjct: 164 PDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI 223

Query: 163 VVLGRILRSCF--TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           + +   +R      PNAVT+  L    C    I  A  +  +       P+V T NT+I 
Sbjct: 224 IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIG 283

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLCR G    AL  F E      E     + N VTY+T+         VD A ELF +M 
Sbjct: 284 GLCRVGRVGAALEFFREKRTVWPE----ARGNAVTYSTLASAFLHCNNVDMAMELFHEMA 339

Query: 281 DENINPDVVTYTSVIRG-----------------------------------FCYANDWN 305
           D    PD V Y ++I G                                   FC     +
Sbjct: 340 DHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLH 399

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  L  EM   G+QPDV T++ ++  LCK G       LL  MI  G  P+  T+ TL+
Sbjct: 400 EAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLV 459

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            GYC   K D A ++F SM+      + V YNTLI++ CK+++V+ A+ L+ EM  K + 
Sbjct: 460 HGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVP 519

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
             V TYN L  GL +    E+A +L D MR      +  T +  ++ L + G   E L+ 
Sbjct: 520 ANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGET-ERLKC 578

Query: 486 FRAIRDSK 493
           F   RD K
Sbjct: 579 FMQQRDQK 586


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 210/428 (49%), Gaps = 8/428 (1%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           I+L    EA   F  M R    P    S N L    AK    D V   FK +  AG  P 
Sbjct: 74  IDLGMLEEATQCFSKMKRFRVFPK-TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPT 132

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           ++T++I+I+C  K G +     +   +      P+ VT+ S+I G     R+ +    F 
Sbjct: 133 VFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFE 192

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           + +  +CEPDV TYN+LIN  C++G     L  + EM           KPN V+Y+T++D
Sbjct: 193 EMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG------LKPNVVSYSTLVD 246

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
             CKE  + +A + ++ M+     P+  TYTS++   C   + ++A RL  EM++ GV+ 
Sbjct: 247 AFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEW 306

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT++ ++D LC   +M +A +L   M+  GV PN  +YN LI G+     +D A +L 
Sbjct: 307 NVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELL 366

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ++  G   D++ Y T I   C  + +E A  + +EM   GIK   + Y TL    F+ 
Sbjct: 367 NELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS 426

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVS 500
                 L L +EM+         T+   IDGLCK+  V +A++ F R   D   + N   
Sbjct: 427 GNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAV 486

Query: 501 YNCLIDGL 508
           Y  +IDGL
Sbjct: 487 YTAMIDGL 494



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 210/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    F+ LF  L      +     F ++    +FP   + + L++ F K+G+       
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   P   T+  +I  +  E  I  A  LF + +     PD  TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     +  FEEM +      + C+P+ +TYN++I+  CK G + K  E + +MK   +
Sbjct: 181 VGRLDDTVYFFEEMKS------MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y++++  FC  +   +A + +++M   G  P+  T++ ++D  CK G +  A R
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFR 294

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+  GV  N  TY  LIDG C  +++  A KLF  M + G + ++ SYN LI+ + 
Sbjct: 295 LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K+++ AL L +E+  +GI+P ++ Y T   GL  + ++E A  + +EM+ N + A+T 
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   +D   KSG   E L L   +++  +E+ +V++  LIDGL
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 204/405 (50%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N +     K    D  +  F+ + S    PD+ T++ LINCFCK G++  G   
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEF 225

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +S   PN V++++L+   C E  + +A   +   R     P+ FTY +L++  C+
Sbjct: 226 YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCK 285

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  L  EM     E GV  + N VTY  +IDGLC    + +A++LF KM    +
Sbjct: 286 IGNLSDAFRLANEML----EVGV--EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGV 339

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++ +Y ++I GF  A + + A  L  E+  +G+QPD++ +   +  LC   K++ A  
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKV 399

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++  M   G+  NT  Y TL+D Y  +        L   M+       VV++  LI+  C
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459

Query: 405 KNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           KNK V +A+  +  M +  G++P    Y  +  GL + +QV+ A  LF++M +  +  D 
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y + +DG  K G +LEAL L   + +   +L++++Y  L+ G 
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGF 564



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 175/359 (48%), Gaps = 7/359 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++ L     K       +  +  +   G  P+ +T++ L++  CK+G +S  F +
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L      N VT+T+LI GLC   R+ EA  LF K       P++ +YN LI+G  +
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   AL L  E+       G   +P+ + Y T I GLC    ++ AK +  +M++  I
Sbjct: 356 AKNMDRALELLNELK------GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + + YT+++  +  + +  E   L  EM +   +  VVTF V++D LCKN  + KA  
Sbjct: 410 KANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID 469

Query: 345 LLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
               M    G+ PN   Y  +IDG C  +++  A  LF  M   G + D  +Y +L++  
Sbjct: 470 YFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGN 529

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            K  ++ EAL+L  +M   G+K  ++ Y +L  G  + +Q+++A    +EM    +  D
Sbjct: 530 LKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 144/261 (55%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC P    ++ +   L   G +++A + F KMK   + P   +   ++  F      +  
Sbjct: 58  VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           KR F +M+  G +P V T+++++D + K G ++ A  L E M +RG+ P+T TYN++IDG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y    ++D     F  M+S  C  DV++YN+LIN +CK+  + + L  Y EM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VV+Y+TL     +   +++A+K + +MRR     + +TY + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +   E N+V+Y  LIDGL
Sbjct: 298 EMLEVGVEWNVVTYTALIDGL 318


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 219/409 (53%), Gaps = 7/409 (1%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M  SP   +  +IL G L + + +D+V   ++ + S GL PD++ + +L  C  K G  S
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               +L  +      PN   +T  I  LC ++++ EA  +F   +     P+++TY+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +G C+TG+   A  L++E+            PN V + T++DG CK   +  A+ LF+ M
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFVHM 330

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               ++P++  Y  +I G C + +  EA  L  EM    + PDV T++++++ LC   ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A+RL + M    + P++ TYN+LI GYC    ++ A  L   M ++G   ++++++TL
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ YC  +D++ A+ LY EM  KGI P VVTY  L    F+   ++ AL+L+ +M    +
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             + +T+   +DG  K G +  A++ ++     +   N V + CLI+GL
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  + +LF C  K   Y     L   + S G+ P++Y ++I I   C+  ++     +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    PN  T++++I G C    + +A  L+ +  V    P+V  + TL++G C+
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + A +LF  M     +FGV   PN   YN +I G CK G + +A  L  +M+  N+
Sbjct: 317 ARELVTARSLFVHMV----KFGV--DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV TYT +I G C  +   EA RLF +M ++ + P   T++ ++   CK   M++A  
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   GV PN  T++TLIDGYC    I  A  L+  M   G + DVV+Y  LI+ + 
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +++EAL LYS+ML  GI P   T+  L  G ++  ++  A+  + E  +     +  
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   I+GLC++G++L A   F  +R      +I SY  ++ G
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 188/395 (47%), Gaps = 16/395 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M + H   P + +++ +     K  +      L+K +  A L P++     L
Sbjct: 252 EAEKMFELM-KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ FCK   +     +   +++    PN   +  LI G C    ++EA  L ++      
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDVFTY  LINGLC       A  LF++M N          P++ TYN++I G CKE  
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPSSATYNSLIHGYCKEYN 424

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A +L  +M    + P+++T++++I G+C   D   A  L+ EM  +G+ PDVVT++ 
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D   K   M +A RL   M+  G++PN +T+  L+DG+    ++  A   +       
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V +  LI   C+N  +  A   +S+M S GI P + +Y ++  G  +  ++   +
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604

Query: 449 KLFDEMRR---------NHVAADTYTYNNFIDGLC 474
            L  +M +         N + A  Y  N ++   C
Sbjct: 605 MLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 228/422 (54%), Gaps = 11/422 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ ML +   P  + +FN L   L +  H      L  ++   G+ P+++T +I 
Sbjct: 199 EAHELFEEMLGLGICPD-IMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC+   ++    +L  + R   TP+ +T+ +LI GLC   +++EA     K      
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKEG 267
           EPD FTYN++I+G C+ G    A  +  +     G F G V  P+  TY ++I+GLC++G
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRD-----GAFKGFV--PDESTYCSLINGLCQDG 369

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  +F +  ++ + P++V   ++++G        +A +L  EM + G  PD+ T++
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LCK G +  A  L+   I +G  P+ +T+NTLIDGYC   K+D+A ++   M ++
Sbjct: 430 LVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH 489

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV++YN+++N  CK    E+ +  +  M+ KG  P ++TYN L     +  +VE A
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS-KYELNIVSYNCLID 506
           L L +EM+   +  D   +   + G C +G +  A +LF+ + +  K+   I +YN +I+
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMIN 609

Query: 507 GL 508
             
Sbjct: 610 AF 611



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 202/391 (51%), Gaps = 9/391 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ + D + R     P V ++N L   L KN          +++ + G  PD +T++ 
Sbjct: 268 NEAIRLLDGVGR--GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNS 325

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ +CK+G + +   +L       F P+  T+ SLI GLC +  I  A  +F +     
Sbjct: 326 IIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKG 385

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P++   NTL+ GL + G  + AL L  EM+  NG     C P+  TYN +I+GLCK G
Sbjct: 386 LKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE-NG-----CSPDIWTYNLVINGLCKIG 439

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A  L +    +   PDV T+ ++I G+C     + A  +   M + GV PDV+T++
Sbjct: 440 CVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYN 499

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I++ LCK GK +      +LM+ +G  PN  TYN L + +C   K++ A  L   M++ 
Sbjct: 500 SILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNK 559

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFLGLFEIHQVER 446
           G   DVV++ TL+  +C N D++ A  L+  +  +     T+ TYN +         +  
Sbjct: 560 GLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNM 619

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           A KLF++M  N  + D+YTY   IDG CK+G
Sbjct: 620 AEKLFNKMCENGFSPDSYTYRVMIDGFCKTG 650



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 220/448 (49%), Gaps = 31/448 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F+ M       P V S+N +   L + +++D    ++ R+   G+ PD+YT +I
Sbjct: 93  QEAVDVFERM-DFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTI 151

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +  FC+  R      +L  +       +AV + ++I G   E+  +EA  LF +     
Sbjct: 152 RMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211

Query: 208 CEPDVFTYNTLINGLCRTGHTI-------------VALNLF----------------EEM 238
             PD+  +N LI+ LCR GH               V+ NLF                E +
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAI 271

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
              +G  G    P+ +TYNT+I GLCK   V +A+    KM +E   PD  TY S+I G+
Sbjct: 272 RLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGY 330

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C       A ++  +   +G  PD  T+  +++ LC++G +D+A  +    + +G+ PN 
Sbjct: 331 CKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNL 390

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
              NTL+ G      I  A KL   M  NGC  D+ +YN +IN  CK   V +A +L  +
Sbjct: 391 VLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVID 450

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
            ++KG  P V T+NTL  G  +  +++ A+++ D M  + V+ D  TYN+ ++GLCK+G 
Sbjct: 451 AIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGK 510

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLID 506
             + +  F+ + +     NI++YN L +
Sbjct: 511 YEDVMGTFKLMMEKGCVPNIITYNILTE 538



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 201/406 (49%), Gaps = 44/406 (10%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           GL   +Y  ++    + + G++     V  R+      P+  ++ +++  L       +A
Sbjct: 73  GLLEGVYIGAM--RNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQA 130

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTG------------------------------ 226
             ++ + R     PDV+T+   +   CRT                               
Sbjct: 131 HKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGG 190

Query: 227 -----HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
                H + A  LFEEM       G+   P+ + +N +I  LC++G V +++ L  K+  
Sbjct: 191 FYEENHRVEAHELFEEM------LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLK 244

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             ++P++ T    I+GFC     NEA RL ++ + +G+ PDV+T++ ++  LCKN K+ +
Sbjct: 245 RGVSPNLFTVNIFIQGFCQRAMLNEAIRL-LDGVGRGLTPDVITYNTLICGLCKNFKVVE 303

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A   L  M+  G  P+ +TYN++IDGYC    + +A ++       G + D  +Y +LIN
Sbjct: 304 AEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLIN 363

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C++ D++ A+++++E + KG+KP +V  NTL  GL +   + +ALKL +EM  N  + 
Sbjct: 364 GLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSP 423

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D +TYN  I+GLCK G V +A  L        +  ++ ++N LIDG
Sbjct: 424 DIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDG 469



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 44/355 (12%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PD  T+  LIN  C+ G +     V    +     PN V   +L+KGL  +  I++A
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQA 409

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVT 255
             L  +     C PD++TYN +INGLC+ G    A NL  + +A G+        P+  T
Sbjct: 410 LKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH-------LPDVFT 462

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +NT+IDG CK+  +D A E+  +M +  ++PDV+TY S++ G C A  + +    F  MM
Sbjct: 463 FNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMM 522

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC------ 369
           ++G  P+++T++++ +  CK  K+++A  L+E M  +G+ P+   + TL+ G+C      
Sbjct: 523 EKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLD 582

Query: 370 ----LTDKIDH--------------------------ARKLFVSMESNGCMHDVVSYNTL 399
               L  ++D                           A KLF  M  NG   D  +Y  +
Sbjct: 583 GAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVM 642

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           I+ +CK  ++    S     + KG+ P++ T+  +   L    +V  A+ +   M
Sbjct: 643 IDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLM 697



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 168/332 (50%), Gaps = 9/332 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +   N L   L++       L L   ++  G  PDI+T++++IN  CK+G VS    +
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +     P+  TF +LI G C + ++  A  +  +       PDV TYN+++NGLC+
Sbjct: 448 VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCK 507

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     +  F+ M          C PN +TYN + +  CK   V++A  L  +M+++ +
Sbjct: 508 AGKYEDVMGTFKLMMEKG------CVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKAS 343
            PDVV + ++++GFC   D + A +LF  + +Q      + T++++++       M+ A 
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L   M   G +P++YTY  +IDG+C T  I+      +     G +  + ++  ++N  
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           C  + V EA+ +   M+ KGI P VV  NT+F
Sbjct: 682 CLKRRVHEAVGIIHLMVHKGIVPEVV--NTIF 711



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 88/231 (38%), Gaps = 40/231 (17%)

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLL---ELMIWRGVNPNTYTYNTLIDGYCLTD 372
           + G +  ++T+  ++++L  +G+ +    +L    + I  G+    Y     +  Y    
Sbjct: 33  EDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYI--GAMRNYGRKG 90

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV---- 428
           KI  A  +F  M+   C   V SYN ++N   + +  ++A  +Y  M  KGI P V    
Sbjct: 91  KIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFT 150

Query: 429 -------------------------------VTYNTLFLGLFEIHQVERALKLFDEMRRN 457
                                          V Y T+  G +E +    A +LF+EM   
Sbjct: 151 IRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGL 210

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  D   +N  I  LC+ G V E+  L   +       N+ + N  I G 
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 183/327 (55%), Gaps = 8/327 (2%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           ++KGLC    + EA  L  +    +  PD+ +YNTLINGLC+      A+ L  EM    
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                 C PN+VT  T++DGLCK+G +D+A EL   MK +  + DVV Y ++I GFC   
Sbjct: 64  ------CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           + +  K LF EM+ +G+  +VVT+S ++  LC+ G+  +A+ +L  M   G++P+  TY 
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LIDG C   +  HA  L   M   G     V+YN L++  CK   V +A  +   M+ K
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVL 480
           G K  VVTYNTL  GL +  +V+ ALKLF+ M    N +  + +T+N  I GLCK G + 
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           +A+++ R +       N+V+YN L+ G
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGG 324



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 216/435 (49%), Gaps = 43/435 (9%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            NI+   L +N      + L + +    + PDI +++ LIN  CK  ++     +L  + 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   PN+VT T+L+ GLC + R+ EA  L    +    + DV  Y TLI+G C  G+  
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
               LF+EM       G     N VTY+ ++ GLC+ G   +A  +   M +  I+PDVV
Sbjct: 121 RGKELFDEM------LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 174

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYT +I G C       A  L   M+++G +P  VT++V++  LCK G +  A ++L +M
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMH-DVVSYNTLINWYCKNK 407
           I +G   +  TYNTL+ G C   K+D A KLF SM ++  C+  +V ++N LI   CK  
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK------------------ 449
            + +A+ ++ +M+ KG    +VTYN L  G  +  +++ A++                  
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354

Query: 450 -----------------LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
                            LF EMR + +    + YN  +  LCK G + +A  LF+ + ++
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414

Query: 493 KYELNIVSYNCLIDG 507
             E +I+S+N +IDG
Sbjct: 415 NCEPDIISFNTMIDG 429



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 44/442 (9%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+   ++ G L K+   D  + L + +   G   D+  +  LI+ FC  G +  G  
Sbjct: 66  PNSVTCTTLMDG-LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKE 124

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L    + N VT++ L+ GLC   +  EA  +          PDV TY  LI+GLC
Sbjct: 125 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 184

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A++L   M    GE     +P+ VTYN ++ GLCKEG V  A ++   M ++ 
Sbjct: 185 KDGRATHAMDLLNLMVE-KGE-----EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDK 341
              DVVTY ++++G C     +EA +LF  M D    ++P+V TF++++  LCK G++ K
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 342 ASRLLELMI------------------------------WR-----GVNPNTYTYNTLID 366
           A ++   M+                              W+     G  PN++TY+ LID
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    ++ A+ LF  M ++G    +  YNTL+   CK   +E+A SL+ EM +   +P
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            ++++NT+  G  +    +   +L  +M    +  D  T++  I+ L K G + EA    
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +  S +  + + Y+ L+ GL
Sbjct: 479 ERMVASGFTPDALVYDSLLKGL 500



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 207/412 (50%), Gaps = 11/412 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGC--LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           +FD ML    S   V+   ++ G   L + K  +TVL+    +   G+ PD+ T++ LI+
Sbjct: 125 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN---AMAEHGIHPDVVTYTGLID 181

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GR +H   +L  ++     P+ VT+  L+ GLC E  +++A  +         + 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           DV TYNTL+ GLC  G    AL LF  M +         +PN  T+N +I GLCKEG + 
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN----CLEPNVFTFNMLIGGLCKEGRLT 297

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           KA ++  KM  +    ++VTY  ++ G   A    EA  L+ +++D G  P+  T+S+++
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D  CK   ++ A  L   M   G+NP  + YNTL+   C    ++ A+ LF  M +  C 
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D++S+NT+I+   K  D +    L  +M+  G++P  +T++TL   L ++ +++ A   
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR--AIRDSKYELNIVS 500
            + M  +    D   Y++ + GL   G   E + L    A + +  +  IVS
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVS 529



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 190/407 (46%), Gaps = 8/407 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V ++  L   L K+      + L   +   G  P   T+++L++  CK G V  
Sbjct: 167 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 226

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTL 218
            F +L  ++      + VT+ +L+KGLC + ++ EA  LF          EP+VFT+N L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I GLC+ G    A+ +  +M    G  G     N VTYN ++ G  K G + +A EL+ +
Sbjct: 287 IGGLCKEGRLTKAVKIHRKMVK-KGSCG-----NLVTYNMLLGGCLKAGKIKEAMELWKQ 340

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           + D    P+  TY+ +I GFC     N AK LF EM   G+ P +  ++ +M  LCK G 
Sbjct: 341 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 400

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +++A  L + M      P+  ++NT+IDG          ++L + M   G   D ++++T
Sbjct: 401 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 460

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LIN   K  +++EA S    M++ G  P  + Y++L  GL         + L  +M    
Sbjct: 461 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
              D    +  +  LC S   ++ +EL         E   +S N L+
Sbjct: 521 TVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 142/252 (56%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N ++ GLC+ G V +A  L  +M  ++++PD+V+Y ++I G C A    EA  L +EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G  P+ VT + +MD LCK+G+MD+A  LLE M  +G + +   Y TLI G+C    +D 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            ++LF  M   G   +VV+Y+ L++  C+    +EA ++ + M   GI P VVTY  L  
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  +   A+ L + M          TYN  + GLCK G V++A ++ R + +   + 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 497 NIVSYNCLIDGL 508
           ++V+YN L+ GL
Sbjct: 242 DVVTYNTLMKGL 253



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 17/349 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRL--NSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           V ++N L   L      D  L LF  +  N   L P+++T ++LI   CK GR++    +
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++     N VT+  L+ G     +I EA  L+ +       P+ FTY+ LI+G C+
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                +A  LF EM            P    YNT++  LCKEG +++AK LF +M + N 
Sbjct: 363 MRMLNIAKGLFCEMRTHG------LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 416

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD++++ ++I G   A D+   K L ++M++ G++PD +TFS +++ L K G++D+A  
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            LE M+  G  P+   Y++L+ G            L   M + G + D    +T++   C
Sbjct: 477 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536

Query: 405 ---KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
              +  DV E L  + +  S+G     ++ N L   L ++HQ    L+L
Sbjct: 537 HSIQEVDVMELLPTFFQGTSEG---ASISCNEL---LMQLHQSHPKLQL 579


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 207/404 (51%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++       +K    +     F  + S G+ P++  ++ LI   CK G V+  F V
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 587

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              IL      +  T++ LI GL    ++ EA  +F++ +     P+ FTYN+LI+G C+
Sbjct: 588 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 647

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  L EEM            P+ VTYN +IDGLCK G +++AK LF  ++   +
Sbjct: 648 QGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY +++ G+C + +   A +L  EM+ +GV PD   ++VI++  CK  K +KA  
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+ +G   +T ++NTLI+GYC + K+  A  L   M     + + V+Y +LI+  C
Sbjct: 762 LFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA  L+ EM  + + PT  TY +L  G   I  +     LF+EM    +  D  
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   ID  C+ G V+EA +L   I      +++ +Y+ LI  L
Sbjct: 881 TYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQAL 924



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 212/420 (50%), Gaps = 9/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +   M+ +   P P++ +N L     +    +    +   + + G+  ++   + L
Sbjct: 303 EAKLMLLEMIDVGLKPEPIT-YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 361

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N  CK G++     ++  ++     P++ T++ LI+G C    +  A  L  + +    
Sbjct: 362 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P V TY+ +INGLCR G+      +  EM  NG        KPN V Y T++    KEG
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-------LKPNAVVYTTLMTAHAKEG 474

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++++ +  +M+++ I PDV  Y S+I GFC A    EA+   +EM+++ ++P+  T+ 
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 534

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +D   K G+M+ A R    M+  GV PN   Y  LI+G+C    +  A  +F  + S 
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             + DV +Y+ LI+   +N  + EA  ++SE+  KG+ P   TYN+L  G  +   V++A
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 654

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L +EM    +  D  TYN  IDGLCK+G +  A  LF  I       N V+Y  ++DG
Sbjct: 655 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 714



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 213/433 (49%), Gaps = 34/433 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++L     + ++      L   +    L P + T+S++IN  C+ G +     +
Sbjct: 388 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 447

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   PNAV +T+L+     E R+ E+  +  + R     PDVF YN+LI G C+
Sbjct: 448 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 507

Query: 225 TGHTIVALNLFEEM--------ANGNGEF-----------------------GVVCKPNT 253
                 A     EM        A+  G F                       GV+  PN 
Sbjct: 508 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL--PNV 565

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             Y  +I+G CKEG V +A  +F  +    +  DV TY+ +I G       +EA  +F E
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           + ++G+ P+  T++ ++   CK G +DKAS+LLE M  +G+NP+  TYN LIDG C   +
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           I+ A+ LF  +E  G   + V+Y  +++ YCK+K+   A  L  EML +G+ P    YN 
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +     +  + E+AL LF EM     A+ T ++N  I+G CKSG + EA  L   + + +
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804

Query: 494 YELNIVSYNCLID 506
           +  N V+Y  LID
Sbjct: 805 FIPNHVTYTSLID 817



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 223/441 (50%), Gaps = 45/441 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N++ G L + +  D  + L + +   GL PD+YT+ ILIN FC   R     ++
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC--EPDVFTYNTLINGL 222
           L  ++     P  +T+ +LI G   +  I +A  +  K  + AC  E ++  +NTL+NG+
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRI--KDEMVACGIEANLIIWNTLLNGV 365

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    AL + +EM     E GV  +P++ TY+ +I+G C+   + +A EL  +MK  
Sbjct: 366 CKAGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P V+TY+ +I G C   +      +  EM+  G++P+ V ++ +M    K G+++++
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR------------------------ 378
             +LE M  +G+ P+ + YN+LI G+C   +++ AR                        
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 379 -----------KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                      + F  M S G + +V  Y  LI  +CK  +V EA S++  +LS+ +   
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           V TY+ L  GL    ++  A  +F E++   +  + +TYN+ I G CK G V +A +L  
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +       +IV+YN LIDGL
Sbjct: 660 EMCIKGINPDIVTYNILIDGL 680



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 211/433 (48%), Gaps = 29/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S N L G L K    +    +F  + +  + PD+YT++ +I+  CK+G V     V
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     +PN VT+  +I GLC    + EA  L          PD++TY+ LING C 
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297

Query: 225 TGHTIVALNLFEEMAN--------------------GNGEFG-------VVC--KPNTVT 255
              +  A  +  EM +                    G+ E         V C  + N + 
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 357

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +NT+++G+CK G ++KA E+  +M ++ + PD  TY+ +I G C   +   A  L  EM 
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P V+T+SVI++ LC+ G +   + +L  M+  G+ PN   Y TL+  +    +++
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            +R +   M   G + DV  YN+LI  +CK K +EEA +   EML + ++P   TY    
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +  ++E A + F+EM    V  +   Y   I+G CK G V EA  +FR I   +  
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597

Query: 496 LNIVSYNCLIDGL 508
            ++ +Y+ LI GL
Sbjct: 598 QDVQTYSVLIHGL 610



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 199/419 (47%), Gaps = 8/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F ++L        V ++++L   L++N        +F  L   GL P+ +T++ L
Sbjct: 583 EAFSVFRFILSRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G V     +L  +      P+ VT+  LI GLC    I  A  LF        
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY  +++G C++ +   A  L EEM       GV   P+   YN I++  CKE  
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEML----LRGV--PPDAFIYNVILNFCCKEEK 755

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +KA +LF +M ++      V++ ++I G+C +    EA  L  EM+++   P+ VT++ 
Sbjct: 756 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 814

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK G M +A RL   M  R V P   TY +L+ GY     +     LF  M + G
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D ++Y  +I+ YC+  +V EA  L  E+L KG+  +V  Y+ L   L +  +    L
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           KL +E+  +       T +    G   +G + EA E+ R++    +  N  S   L+DG
Sbjct: 935 KLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 172/299 (57%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+   ++ L++   + G  + A+N+F  +   N EF    +P+ ++ N+++  L K   V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEF----RPSLLSCNSLLGDLLKGNKV 196

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +   ++F  M    + PDV TYT++I   C   +  +AKR+ +EM ++G  P++VT++VI
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LC+   +D+A  L   M+ +G+ P+ YTY+ LI+G+C+  +   A+ + + M   G 
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + ++YN LI+ + +  D+E+A  +  EM++ GI+  ++ +NTL  G+ +  ++E+AL+
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  EM    V  D+ TY+  I+G C+   +  A EL   ++  K    +++Y+ +I+GL
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 159/395 (40%), Gaps = 64/395 (16%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA  IF   L+     P   ++N L     K  + D    L + +   G+ PDI T++I
Sbjct: 617  HEAFGIFSE-LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI+  CK G +     +   I     TPN VT+ +++ G C       A  L  +  +  
Sbjct: 676  LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG--------NGEFGVVCK--------- 250
              PD F YN ++N  C+      AL+LF+EM           N      CK         
Sbjct: 736  VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 795

Query: 251  -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN---------------- 283
                       PN VTY ++ID  CK G + +AK L+L+M++ N                
Sbjct: 796  LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 855

Query: 284  -------------------INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
                               I PD +TY  +I  +C   +  EA +L  E++ +G+   V 
Sbjct: 856  NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVA 915

Query: 325  TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
             +  ++  LCK  +  +  +LL  +   G      T + +  G+ +   +D A ++  SM
Sbjct: 916  AYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975

Query: 385  ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
               G + +  S   L++      + E++ +L  +M
Sbjct: 976  VKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/401 (32%), Positives = 204/401 (50%), Gaps = 9/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+NIL   L           LF  + SA   PD+ T+ ILI+  C +G + +   +L 
Sbjct: 259 VCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLD 315

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     PNA  +TS++  LC +  I +A  +           D   Y T+++G C  G
Sbjct: 316 EMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKG 375

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             + A   F+EM             + VTY T+I+GLC+   +++A++L  +M    ++ 
Sbjct: 376 DLVSARRWFDEMQRKG------LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDV 429

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTYT +I G+C      EA ++   M+ +GV P+VVT++ + D LCK G +  A+ LL
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G+  N  TYN+LI+G C    ++ A +    M++     DV +Y TLI+  CK+
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D++ A SL  EML KGIKPT+VTYN L  G     +VE   KL D M   ++  +  TY
Sbjct: 550 GDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY 609

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N+ +   C    +    E+++ +R      N  +YN LI G
Sbjct: 610 NSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKG 650



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 184/342 (53%), Gaps = 6/342 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  +   GL  D  T++ +IN  C+   +     +L  +       + VT+T LI G C 
Sbjct: 384 FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCK 443

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  +          P+V TY  L +GLC+ G    A  L  EM+N   E     
Sbjct: 444 RGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL---- 499

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             N  TYN++I+GLCK G++++A      M    + PDV TYT++I   C + D + A  
Sbjct: 500 --NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM+D+G++P +VT++V+M+  C +G+++   +LL+ M+ + ++PN  TYN+L+  YC
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYC 617

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           + + +    +++  M S     +  +YN LI  +CK ++++EAL  + EM+ KG + T  
Sbjct: 618 IENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTAT 677

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           +Y+ L   L +  +   A +LF +MR+  + A++  Y+ +ID
Sbjct: 678 SYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 197/400 (49%), Gaps = 24/400 (6%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +SF+ L  CL           L +RL   G+ P          C   + R+     +   
Sbjct: 205 ASFDFLLLCLPS-------APLLRRLRQYGISPSPEA------CNAVLSRLPLDEAI--E 249

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           + +     N  ++  L+K LC   R+ +A  LF +    A  PDV TY  LI+G C  G 
Sbjct: 250 LFQELPHKNVCSYNILLKALCDAGRVKDARQLFDE---MASAPDVVTYGILIHGHCALGE 306

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L +EM  G  E      PN   Y +++  LC +G++  A  +   M    +  D
Sbjct: 307 LENAVKLLDEMVAGGVE------PNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILD 360

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
              YT+V+ GFC   D   A+R F EM  +G+  D VT++ +++ LC+  ++++A +LL+
Sbjct: 361 EALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQ 420

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  R ++ +  TY  LIDGYC   K+  A ++  +M   G   +VV+Y  L +  CK  
Sbjct: 421 EMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQG 480

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           DV+ A  L  EM +KG++    TYN+L  GL +   +E+A++   +M    +  D YTY 
Sbjct: 481 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYT 540

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ID LCKSG +  A  L + + D   +  IV+YN L++G
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNG 580



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 180/366 (49%), Gaps = 6/366 (1%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D   ++ +++ FC  G +         + R     + VT+T++I GLC    + EA  L 
Sbjct: 360 DEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLL 419

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +      + D  TY  LI+G C+ G    A     +M N   + GV   PN VTY  + 
Sbjct: 420 QEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF----QMHNAMVQRGVT--PNVVTYTALT 473

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DGLCK+G V  A EL  +M ++ +  +  TY S+I G C A    +A R   +M    ++
Sbjct: 474 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLK 533

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PDV T++ ++D LCK+G +D+A  LL+ M+ +G+ P   TYN L++G+C++ +++  +KL
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKL 593

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              M       +  +YN+L+  YC   +++    +Y  M S+ + P   TYN L  G  +
Sbjct: 594 LDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCK 653

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
              ++ AL   DEM +        +Y+  I  L K    +EA ELF  +R          
Sbjct: 654 ARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDV 713

Query: 501 YNCLID 506
           Y+  ID
Sbjct: 714 YDFYID 719



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 153/298 (51%), Gaps = 9/298 (3%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +V +YN L+  LC  G    A  LF+EMA+          P+ VTY  +I G C  G ++
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMASA---------PDVVTYGILIHGHCALGELE 308

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            A +L  +M    + P+   YTSV+   C     ++A R+  +M+ + V  D   ++ ++
Sbjct: 309 NAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVL 368

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
              C  G +  A R  + M  +G+  +  TY T+I+G C   +++ A KL   M +    
Sbjct: 369 SGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLD 428

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D V+Y  LI+ YCK   + EA  +++ M+ +G+ P VVTY  L  GL +   V+ A +L
Sbjct: 429 VDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANEL 488

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             EM    +  +  TYN+ I+GLCK+G++ +A+     +  +  + ++ +Y  LID L
Sbjct: 489 LHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 6/262 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K         L   +++ GL  +  T++ LIN  CK G +      
Sbjct: 464 PNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRT 523

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +  +C  P+  T+T+LI  LC    +  A +L  +      +P + TYN L+NG C 
Sbjct: 524 MADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 583

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G       L + M   N        PN  TYN+++   C E  +    E++  M+  ++
Sbjct: 584 SGRVEGGKKLLDWMLEKN------IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDV 637

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TY  +I+G C A +  EA     EM+ +G +    ++S ++  L K  K  +A  
Sbjct: 638 GPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARE 697

Query: 345 LLELMIWRGVNPNTYTYNTLID 366
           L   M   G+   +  Y+  ID
Sbjct: 698 LFHDMRKEGLTAESDVYDFYID 719


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 218/466 (46%), Gaps = 66/466 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS----------------------------- 135
           PP+   N L   LA+++ +  + SL  R+ +                             
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSL 98

Query: 136 --AGLFPDIYTHSILINCFCKMGRVSHG---FVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
             AGL PD Y ++  +  +C+ G ++H    FV++   LR C    A T+T+L+ GL   
Sbjct: 99  LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP--LRGCLR-TAFTYTALLHGLLGA 155

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT------------------IVAL 232
             + EA  +F   R  +C PD   Y T+++GLC  G T                  IV  
Sbjct: 156 GMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 233 NLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           N   +     GE            G  C PN  TY  +I GLCK G V++A  LF +M +
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             + P+VVTYT++I+G C       A RL   M   G+ P+  TFSV++D LCK  K+++
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A   L  ++ +GV  N   Y +LIDG C T KID A +L   M S G + D  SY++LI+
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+ K + +A  +  +M+ KGI+ + VTY  +   L      E   K+FD+M    +  
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TY  F+   C+ G + +A  +   + D     N+V+YN LI G
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 18/414 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L          +  L +F+ ++     P++ T++ LI+  CK G+V    V+
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++ +   PN VT+T+LI+G C E  +  A  L          P+ +T++ LI+ LC+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +    LF       G      K N V Y ++IDGLCK G +D A EL  KM  E  
Sbjct: 330 R-EKVEEAQLFLGSLVKKG-----VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  +Y+S+I G C     ++A  +  +MM++G+Q   VT+++I+DEL +    +   +
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + MI  G+NP+  TY   +  YC   +++ A  + V M   G   ++V+YNTLI  Y 
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLF------------LGLFEIHQVERALKLFD 452
               V +A S +  M+ KG KP   +Y  L             + +++I  ++    L +
Sbjct: 504 NLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLE 563

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           ++    +      Y+ FI  LC+   + EA   F  ++++    +   Y  +ID
Sbjct: 564 DITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 152/321 (47%), Gaps = 21/321 (6%)

Query: 200 FTKHRVFACEPD------------VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
             +HR+F   PD            + TY TLIN  C  G    A      + +       
Sbjct: 51  LARHRMF---PDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG----- 102

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P++  Y + + G C+ G +  A  +F+ M          TYT+++ G   A    EA
Sbjct: 103 -LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +F+ M      PD   ++ ++  LC+ G+ ++A  LLE  +  G  PN   YN LIDG
Sbjct: 162 MTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   +++HA K+F  M+ N C  +V +Y  LI+  CK+  VE A+ L+S M+  G++P 
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTY  L  G      ++ A +L   M  N +  + +T++  ID LCK   V EA     
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           ++     ++N V Y  LIDGL
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGL 362


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 13/381 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKM 155
           +LR  P P  V+ +N +             L + + +    G+ P+ YT+  +I+ +CK+
Sbjct: 63  LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121

Query: 156 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDV 212
           GRV     V   +L +    P AV + +LI G C + ++    AL  + R+        V
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL--DTALLYRDRMVERGVAMTV 179

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN L++ L   G    A  L EEM  G G       P+  TYN +I+G CKEG V KA
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKA 233

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+F  M    +   VVTYTS+I          E  +LF E + +G++PD+V ++ +++ 
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 293

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              +G +D+A  ++  M  + + P+  TYNTL+ G CL  ++D ARKL   M   G   D
Sbjct: 294 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 353

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+YNTLI+ Y    DV++AL + +EM++KG  PT++TYN L  GL +  Q + A  +  
Sbjct: 354 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 413

Query: 453 EMRRNHVAADTYTYNNFIDGL 473
           EM  N +  D  TY + I+GL
Sbjct: 414 EMVENGITPDDSTYISLIEGL 434



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 189/393 (48%), Gaps = 19/393 (4%)

Query: 126 VLSLFKRLNSAGLFPDIY---------THSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           +LS      +  LF D++         T +I++   C  G+ +        +LR    PN
Sbjct: 16  LLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPN 71

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           AVT+ ++I G C+  R+  A  +  + R      P+ +TY T+I+G C+ G    A+ +F
Sbjct: 72  AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 131

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           +EM    GE     KP  V YN +I G C +G +D A     +M +  +   V TY  ++
Sbjct: 132 DEMLT-KGE----VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 186

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
                     EA  L  EM  +G+ PDV T++++++  CK G + KA  + E M  RGV 
Sbjct: 187 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 246

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
               TY +LI       ++    KLF      G   D+V YN LIN +  + +++ A  +
Sbjct: 247 ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM  K I P  VTYNTL  GL  + +V+ A KL DEM +  +  D  TYN  I G   
Sbjct: 307 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 366

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G V +AL +   + +  +   +++YN LI GL
Sbjct: 367 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 399



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 204/424 (48%), Gaps = 19/424 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M R+   P   ++FNI+   L         L L +++      P+  T++ +I
Sbjct: 25  AFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 79

Query: 150 NCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALF----TKHR 204
             FC  GRV     ++  +  R    PN  T+ ++I G C   R+ EA  +F    TK  
Sbjct: 80  AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           V   +P+   YN LI G C  G    AL   + M     E GV       TYN ++  L 
Sbjct: 140 V---KPEAVMYNALIGGYCDQGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALF 190

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G   +A EL  +M  + + PDV TY  +I G C   +  +A  +F  M  +GV+  VV
Sbjct: 191 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 250

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++  L K G++ +  +L +  + RG+ P+   YN LI+ +  +  ID A ++   M
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E      D V+YNTL+   C    V+EA  L  EM  +GI+P +VTYNTL  G      V
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL++ +EM          TYN  I GLCK+G   +A  + + + ++    +  +Y  L
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430

Query: 505 IDGL 508
           I+GL
Sbjct: 431 IEGL 434



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 8/274 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+L   L  +        L + +   GL PD++T++ILIN  CK G V     +  
Sbjct: 179 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R       VT+TSLI  L  + ++ E   LF +       PD+  YN LIN    +G
Sbjct: 239 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 298

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  +  EM            P+ VTYNT++ GLC  G VD+A++L  +M    I P
Sbjct: 299 NIDRAFEIMGEMEKKR------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY ++I G+    D  +A R+  EMM++G  P ++T++ ++  LCKNG+ D A  ++
Sbjct: 353 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 412

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDK--IDHAR 378
           + M+  G+ P+  TY +LI+G    D+  ID  R
Sbjct: 413 KEMVENGITPDDSTYISLIEGLTTEDERAIDDER 446


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 219/434 (50%), Gaps = 22/434 (5%)

Query: 87  PNEALCIFDYMLRMHPSP----PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           P+ A+ +F+ + R    P    P V ++NIL  C  + +      +LF R    GL  D+
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDV 154

Query: 143 YTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
              SIL+ C     R      ++L R+      P+ +++ +++K LC +SR   A  L  
Sbjct: 155 IVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLH 214

Query: 202 K--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               +   C P+V TYNT+I+GL R G    A NLF EM     + GVV  P+ VTY +I
Sbjct: 215 TMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMM----QQGVV--PDVVTYTSI 268

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ID LCK   +DKA+ +  +M      P+ VTY  +I G+  +  W E   +F EM  QG+
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGL 328

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY----CLTDKID 375
            P++VT +  M  LCK+GK  +A+   + M  +G  PN  TY+ L+ GY    C  D ++
Sbjct: 329 MPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLN 388

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
               LF SME NG + D   +N +I+ Y K   ++E + ++++M  +G+ P   TY  + 
Sbjct: 389 ----LFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY- 494
                + ++  A+  F++M    +  +   Y++ I G C  G +++A EL   +      
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504

Query: 495 ELNIVSYNCLIDGL 508
             NIV +N +I+ L
Sbjct: 505 RPNIVFFNSIINSL 518



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 223/475 (46%), Gaps = 77/475 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L +        +LF  +   G+ PD+ T++ +I+  CK   +    +V
Sbjct: 225 PNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELV 284

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ + F PN VT+  +I G     +  E A +F +       P++ T N+ ++ LC+
Sbjct: 285 LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCK 344

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTY---------------------------- 256
            G +  A   F+ MA   G      KPN VTY                            
Sbjct: 345 HGKSKEAAEFFDSMA-AKGH-----KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 257 -------NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT----------------- 292
                  N +ID   K G +D+   +F +M+++ + PD  TY                  
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 293 ------------------SVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDEL 333
                             S+I+GFC   +  +AK L  EMM +G+ +P++V F+ I++ L
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL 518

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK G++ +A  + + +I  G  P+  T+N+LIDGY L  KI+ A  +  +M S G   DV
Sbjct: 519 CKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDV 578

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           VSYNTLI+ YC+N  +++ L L+ EMLSKG+KPT +TY  +  GLF   +   A K+  E
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M  +    D  T    + GLC++    EA+ +F+ +     + NI   N +ID +
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 6/404 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA   FD M      P  V+ +++L    A    +  +L+LF  +   G+  D    +I+
Sbjct: 350 EAAEFFDSMAAKGHKPNLVT-YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ + K G +    ++  ++      P+A T+  +I       R+ +A   F +      
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P+   Y++LI G C  G+ + A  L  EM +       + +PN V +N+II+ LCKEG 
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRG-----IPRPNIVFFNSIINSLCKEGR 523

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A ++F  +      PDV+T+ S+I G+       +A  +   M+  G++PDVV+++ 
Sbjct: 524 VVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNT 583

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  C+NG++D    L   M+ +GV P T TY  ++ G     +   A+K+   M  +G
Sbjct: 584 LIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ +   ++   C+N   +EA++++ ++ +  +K  +   NT+   ++++ + E A 
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAK 703

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +LFD +    +  +  TY   I  L K G V EA  +F  +  S
Sbjct: 704 ELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKS 747



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 185/374 (49%), Gaps = 7/374 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNI+     K    D  + +F ++   G+ PD  T+ I+I  F +MGR++       +++
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC-EPDVFTYNTLINGLCRTGHT 228
                P  + + SLI+G C    +++A  L ++        P++  +N++IN LC+ G  
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A ++F+ + +  GE     +P+ +T+N++IDG    G ++KA  +   M    I PDV
Sbjct: 525 VEAHDIFDFVIH-IGE-----RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDV 578

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V+Y ++I G+C     ++   LF EM+ +GV+P  +T+ +I+  L  +G+   A ++   
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           MI  G   +  T   ++ G C  +  D A  +F  + +     ++   NT+I+   K + 
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  L+  + + G+ P   TY  +   L +   VE A  +F  M ++  A  +   N 
Sbjct: 699 REEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNY 758

Query: 469 FIDGLCKSGFVLEA 482
            I  L + G +++A
Sbjct: 759 IIRVLLEKGEIVKA 772



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 57/127 (44%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +S+  I+ G L +N   D  +++FK+L +  +  +I   + +I+   K+ +      +  
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFD 707

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            I  +   PNA T+  +IK L  E  + EA  +F+      C P     N +I  L   G
Sbjct: 708 SISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKG 767

Query: 227 HTIVALN 233
             + A N
Sbjct: 768 EIVKAGN 774


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 210/418 (50%), Gaps = 21/418 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K K  D      + +   GL P++ T +++IN  C+ GR+     V
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R  + P+ VT+ +L+ G C E    +A  L  +       P+V TY +LIN +C+
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A+  F++M         +C PN  TY TII+G  ++G +D+A  +  +M     
Sbjct: 136 AGNLNRAMEFFDQM-----HVRGLC-PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGF 189

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +VTY ++I G C      EA  L  +M+ +GV PDVV++S I+    +N ++D+A +
Sbjct: 190 IPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQ 249

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   MI + V P+  TY++LI G C   ++  A  +F  M +     D  +Y TLIN YC
Sbjct: 250 MKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC 309

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+ +AL L+ EM+ KG  P  VTYN L  GL +  + + A +L  ++  +       
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAV 369

Query: 465 TYNNFID---------------GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+               G C  G + EA ++F ++ +  ++ N   YN +I G
Sbjct: 370 TYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHG 427



 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 200/380 (52%), Gaps = 6/380 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L  FK +   G  P++ T++ +I+ +CK+ R    F  L  +      PN +TF  +I G
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC + R+ E + +  +       PD  TYNTL+NG C+ G+   AL L  EM   NG   
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR-NG--- 118

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               PN VTY ++I+ +CK G +++A E F +M    + P+  TYT++I GF      +E
Sbjct: 119 --LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDE 176

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A R+  EM   G  P +VT++ +++  C  G+M++A  LL+ M+ +GV P+  +Y+T+I 
Sbjct: 177 AYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIIS 236

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+    ++D A ++ V M     + D V+Y++LI   C+ + + EA  ++ EML+  + P
Sbjct: 237 GFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              TY TL     +   + +AL L DEM +     D  TYN  I+GL K     EA  L 
Sbjct: 297 DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356

Query: 487 RAIRDSKYELNIVSYNCLID 506
             +       + V+YN LI+
Sbjct: 357 LKLFYDDSIPSAVTYNTLIE 376



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 187/339 (55%), Gaps = 6/339 (1%)

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R+   PN VT+ ++I G C   R  EA        +   EP++ T+N +INGLCR G   
Sbjct: 11  RNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLK 70

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
               +  EM+      G V  P+ VTYNT+++G CKEG   +A  L  +M    ++P+VV
Sbjct: 71  ETSEVLVEMSRK----GYV--PDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYTS+I   C A + N A   F +M  +G+ P+  T++ I++   + G +D+A R+L  M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G  P+  TYN LI+G+C+  +++ A  L   M   G + DVVSY+T+I+ + +N+++
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           + A  +  EM+ K + P  VTY++L  GL E  ++  A  +F EM    +  D +TY   
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I+  CK G + +AL L   +    +  + V+YN LI+GL
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 197/438 (44%), Gaps = 56/438 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN++   L ++        +   ++  G  PD  T++ L+N +CK G      V+
Sbjct: 51  PNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL 110

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV----------------FAC 208
              ++R+  +PN VT+TSLI  +C    +  A   F +  V                FA 
Sbjct: 111 HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170

Query: 209 E-------------------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           +                   P + TYN LING C  G    A+ L ++M  G G      
Sbjct: 171 QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV-GKGVL---- 225

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ V+Y+TII G  +   +D+A ++ ++M  +++ PD VTY+S+I+G C      EA  
Sbjct: 226 -PDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACD 284

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F EM+   + PD  T++ +++  CK G ++KA  L + MI +G  P+  TYN LI+G  
Sbjct: 285 MFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLN 344

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLIN---------------WYCKNKDVEEALS 414
              +   AR+L + +  +  +   V+YNTLI                 +C    ++EA  
Sbjct: 345 KQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQ 404

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++  M++K  KP    YN +  G   I  V +A KL+ EM        T T    +  L 
Sbjct: 405 VFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALF 464

Query: 475 KSGFVLEALELFRAIRDS 492
             G   E  E+   I  S
Sbjct: 465 TEGMDGELNEVIGDILRS 482



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 185/367 (50%), Gaps = 22/367 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +   M+R   SP  V ++  L   + K  + +  +  F +++  GL P+  T++ 
Sbjct: 105 HQALVLHAEMVRNGLSPN-VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTT 163

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN F + G +   + VL  + RS F P+ VT+ +LI G C   R+ EA  L        
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+T+I+G  R      A  +  EM       G    P+ VTY+++I GLC++ 
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEM------IGKSVLPDAVTYSSLIQGLCEQR 277

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A ++F +M    + PD  TYT++I  +C   D N+A  L  EM+ +G  PD VT++
Sbjct: 278 RLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYN 337

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTD 372
           V+++ L K  +  +A RLL  + +    P+  TYNTLI+               G+C+  
Sbjct: 338 VLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKG 397

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D A ++F SM +     +   YN +I+ +C+  +V +A  LY EM+     P  VT  
Sbjct: 398 LMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVL 457

Query: 433 TLFLGLF 439
            L   LF
Sbjct: 458 ALVKALF 464



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 128/232 (55%)

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M+     P+VVTY ++I G+C     +EA      M  +G++P+++TF++I++ LC+
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           +G++ + S +L  M  +G  P+  TYNTL++GYC       A  L   M  NG   +VV+
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y +LIN  CK  ++  A+  + +M  +G+ P   TY T+  G  +   ++ A ++ +EM 
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           R+       TYN  I+G C  G + EA+ L + +       ++VSY+ +I G
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 112/199 (56%)

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           R F EM   G  P+VVT++ ++D  CK  + D+A   L  M  +G+ PN  T+N +I+G 
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   ++    ++ V M   G + D V+YNTL+N YCK  +  +AL L++EM+  G+ P V
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY +L   + +   + RA++ FD+M    +  +  TY   I+G  + G + EA  +   
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 489 IRDSKYELNIVSYNCLIDG 507
           +  S +  +IV+YN LI+G
Sbjct: 184 MTRSGFIPSIVTYNALING 202



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 79/335 (23%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L          +  + L + +   G+ PD+ ++S +I+ F +   +   F +
Sbjct: 191 PSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQM 250

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     P+AVT++SLI+GLC + R+ EA  +F +       PD FTY TLIN  C+
Sbjct: 251 KVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCK 310

Query: 225 TGHTIVALNLFEEM----------------------ANGNGEFGVVCK-------PNTVT 255
            G    AL+L +EM                      A       ++ K       P+ VT
Sbjct: 311 EGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVT 370

Query: 256 YNTIID---------------GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
           YNT+I+               G C +G +D+A ++F  M ++N  P+   Y  +I G C 
Sbjct: 371 YNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCR 430

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVT--------FSVIMD-------------------EL 333
             +  +A +L+ EM+     P  VT        F+  MD                   EL
Sbjct: 431 IGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAEL 490

Query: 334 CK--------NGKMDKASRLLELMIWRGVNPNTYT 360
            K         G MD    LL  M   G+ P+T T
Sbjct: 491 SKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 72/130 (55%)

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           + F  ME NGC+ +VV+YNT+I+ YCK K  +EA      M  KG++P ++T+N +  GL
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
               +++   ++  EM R     D  TYN  ++G CK G   +AL L   +  +    N+
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 499 VSYNCLIDGL 508
           V+Y  LI+ +
Sbjct: 124 VTYTSLINSM 133



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%)

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            L  + EM   G  P VVTYNT+  G  ++ + + A      M    +  +  T+N  I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           GLC+ G + E  E+   +    Y  + V+YN L++G
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNG 97



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            L+ F EM RN    +  TYN  IDG CK     EA    R++     E N++++N +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 507 GL 508
           GL
Sbjct: 62  GL 63


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 211/399 (52%), Gaps = 6/399 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N L      +   D    + +R+ + G+ P + TH+ LI  +CKM R+   F +  
Sbjct: 224 VVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYE 283

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++RS   P+ VT ++L+ GLC + R  EA ALF +       P+  TY T I+ L +  
Sbjct: 284 GMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQ 343

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               +L L  EM +     GV    + V Y T++D L KEG +++AK++      +NI P
Sbjct: 344 RVNESLGLLGEMVS----RGVAM--DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITP 397

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + VTYT ++   C A + + A+++ ++M ++ V P+VVTFS I++ L K G + KA+  +
Sbjct: 398 NCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYM 457

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G+ PN  TY TLIDG+      + A  ++  M   G   +    ++L+N   KN
Sbjct: 458 RKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKN 517

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++EEA +L+ +M  +G+    V Y TL  GLF+   +  ALK+  E+   +++ D   Y
Sbjct: 518 GNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVY 577

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N FI+ LC+ G   EA    + +R++  E +  +YN +I
Sbjct: 578 NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 616



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 184/361 (50%), Gaps = 6/361 (1%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ +CK+  ++    V+ R+     + + V + +L+ G         A  +  + +   
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP V T+ TLI   C+      A  L+E M       GV+  P+ VT + ++DGLC++G
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS----GVL--PDVVTLSALVDGLCRDG 308

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A  LF +M    + P+ VTY + I         NE+  L  EM+ +GV  D+V ++
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD L K GK+++A  +L   +   + PN  TY  L+D +C    ID A ++ + ME  
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +VV++++++N   K   + +A     +M   GI P VVTY TL  G F+    E A
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L ++ +M    V A+ +  ++ ++GL K+G + EA  LF+ + +    L+ V+Y  L+DG
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548

Query: 508 L 508
           L
Sbjct: 549 L 549



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 195/399 (48%), Gaps = 14/399 (3%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L KN + +   +LFK +   GL  D   ++ L++   K G +     V   ++   
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +P+AV +   I  LC   +  EA +   + R    EPD  TYNT+I+  CR G+T  AL
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM   +       KPN +TY T++ GL + G V+KAK L  +M      P  +TY 
Sbjct: 630 KLLNEMKWSS------IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYR 683

Query: 293 SVIRGFCYANDWNEAKRLFIE----MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            V++    A   + +  + +E    MM  G+  D+  ++ ++  LC +G   KA+ +L+ 
Sbjct: 684 RVLQ----ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDE 739

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ RG+ P+T T+N LI G+C +  +D+A   +  M   G   ++ ++NTL+        
Sbjct: 740 MLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGR 799

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           + EA ++  EM   G++P  +TY+ L  G  +      AL+L+ EM          TYN+
Sbjct: 800 IGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNS 859

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I    K+G + +A ELF  ++         +Y+ L++G
Sbjct: 860 LISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 898



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 191/423 (45%), Gaps = 33/423 (7%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L K    +    + +   S  + P+  T+++L++  C+ G +     +L ++     +PN
Sbjct: 374 LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPN 433

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            VTF+S++ GL     I +AA    K +     P+V TY TLI+G  +      AL+++ 
Sbjct: 434 VVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR 493

Query: 237 EM--------------------ANGN-----------GEFGVVCKPNTVTYNTIIDGLCK 265
           +M                     NGN           GE G++   + V Y T++DGL K
Sbjct: 494 DMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLL--DHVNYATLMDGLFK 551

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G +  A ++  ++ + N++PD V Y   I   C    ++EAK    EM + G++PD  T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++   C+ G   KA +LL  M W  + PN  TY TL+ G      ++ A+ L   M 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S G     ++Y  ++     ++     L ++  M+  G+   +  YNTL   L       
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A  + DEM    +A DT T+N  I G CKS  +  A   +  +       NI ++N L+
Sbjct: 732 KATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLL 791

Query: 506 DGL 508
            GL
Sbjct: 792 GGL 794



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 190/447 (42%), Gaps = 55/447 (12%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P+PPP      L   LA +       S F+ +       D  T + +I  +C +    H 
Sbjct: 46  PAPPPARLLRRLIPALASSGLVAAA-SRFRPVPG-----DPLTLNSIILSYCSL----HA 95

Query: 162 FVVLGRILRSCFTP------NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
                 +LRS   P      + V++   + GL  +     A  + ++        D  T 
Sbjct: 96  LRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTM 155

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK---------- 265
           +T + GL RTG    A  L E +  G G  G+      V +N +IDG CK          
Sbjct: 156 STALVGLSRTGLVGEAAALAEMLVRGRGIDGL----GVVGWNALIDGYCKVQDMAAALAV 211

Query: 266 -------------------------EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                                     G  D A E+  +MK + + P VVT+T++I  +C 
Sbjct: 212 VERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCK 271

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                EA  L+  M+  GV PDVVT S ++D LC++G+  +A  L   M   GV PN  T
Sbjct: 272 MKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVT 331

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y T ID      +++ +  L   M S G   D+V Y T+++   K   +EEA  +    L
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           S  I P  VTY  L         ++ A ++  +M    V+ +  T+++ ++GL K G + 
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           +A    R ++DS    N+V+Y  LIDG
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDG 478



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 180/400 (45%), Gaps = 7/400 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   ++  + SP  V  +N+   CL +   +    S  K + + GL PD  T++ +I
Sbjct: 558 ALKVGQELMERNLSPDAVV-YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 616

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  C+ G  S    +L  +  S   PN +T+T+L+ GL     + +A  L  +       
Sbjct: 617 SAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFT 676

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P   TY  ++     +    V L + E M       G     +   YNT++  LC  G  
Sbjct: 677 PTPLTYRRVLQACSGSRSPYVILEVHELM------MGAGLHADITVYNTLVHVLCCHGMT 730

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            KA  +  +M    I PD +T+ ++I G C ++  + A   + +M+ QG+ P++ TF+ +
Sbjct: 731 RKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTL 790

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  L   G++ +A  ++  M   G+ PN  TY+ L+ GY        A +L+  M S G 
Sbjct: 791 LGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGF 850

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           +    +YN+LI+ + K   + +A  L+SEM  +G+  T  TY+ L  G  ++        
Sbjct: 851 IPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRI 910

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           L  +M+         T ++      K G   EA  L + +
Sbjct: 911 LLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 191/376 (50%), Gaps = 7/376 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VS  N++ G   + +  D  L LF +++    +P + T++++I   C++GR +    +  
Sbjct: 275 VSYTNLIHG-FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFK 333

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN  T+T LI  LC +S   +A  +          P V TYN LI+G C+ G
Sbjct: 334 EMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKG 393

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +  AL +   M + N      C PN  TYN +I G C+   + KA  L  KM +  + P
Sbjct: 394 LSASALEILSLMESNN------CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQP 447

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VVTY  +I G C   D   A +L   M + G+ PD  T+SV +D LCK G +++A  L 
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E +  +G+  N   Y+TLIDGYC   K+   R L   M S GC+ + ++YN+LI+ YCK 
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKE 567

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K+ +EA  L   M+ + I+P   TY  L   L +  + ++A  +FD+M       D + Y
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627

Query: 467 NNFIDGLCKSGFVLEA 482
             FI   C  G + +A
Sbjct: 628 TAFIHAYCSHGRLKDA 643



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 218/433 (50%), Gaps = 28/433 (6%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           +N++ PN  L I + M R+       SS N LF           VL + + +N      D
Sbjct: 117 LNILVPNGYLRIAENM-RILMIKSTDSSENALF-----------VLEMLRSMNRR---VD 161

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRI-------LRSCFTPNAVTFTSLIKGLCAESRIM 194
            +   + + C+  +  +   F+++  +       L    TPN  T  +++ G C    ++
Sbjct: 162 AFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVV 221

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA    +K        D FTY +LI G CR  +   A  +F  M N        C  N V
Sbjct: 222 EAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG------CLRNEV 275

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           +Y  +I G C+   VD+A +LF +M ++N  P V TYT +I   C      EA  +F EM
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            ++  QP+V T++V++  LC++   D A ++L  M+ +G+ P+  TYN LIDGYC     
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A ++   MESN C  +  +YN LI  +C+ K++ +A+SL  +ML + ++P VVTYN L
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G  +   +  A KL   M  + +  D +TY+ FID LCK G V EA  LF ++++   
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515

Query: 495 ELNIVSYNCLIDG 507
           + N V Y+ LIDG
Sbjct: 516 KANEVIYSTLIDG 528



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 204/434 (47%), Gaps = 41/434 (9%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N+L   L++    D + S++  +    + P+I+T + ++N +CK+G V    + + +I+
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           ++  + +  T+TSLI G C    +  A A+F       C  +  +Y  LI+G C      
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            AL LF +M   N      C P   TY  II  LC+ G   +A  +F +M +++  P+V 
Sbjct: 292 EALKLFSQMHEDN------CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG------------ 337
           TYT +I   C  +++++AK++   M+++G+ P VVT++ ++D  CK G            
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 338 -----------------------KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
                                   + KA  LL  M+ R + PN  TYN LI G C    +
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A KL   M  +G + D  +Y+  I+  CK   VEEA SL+  +  KGIK   V Y+TL
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G  ++ +V     L D+M       ++ TYN+ IDG CK     EA  L   +     
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 495 ELNIVSYNCLIDGL 508
           E    +Y  LID L
Sbjct: 586 EPAADTYTILIDNL 599



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 197/423 (46%), Gaps = 11/423 (2%)

Query: 88  NEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +EAL +F    +MH     P V ++ ++   L +       L++FK +      P+++T+
Sbjct: 291 DEALKLFS---QMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTY 347

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++LI   C+         +L  +L     P+ VT+ +LI G C +     A  + +    
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C P+  TYN LI G CR  +   A++L  +M           +PN VTYN +I G CK
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK------LQPNVVTYNILIHGQCK 461

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG +  A +L   M +  + PD  TY+  I   C      EA+ LF  + ++G++ + V 
Sbjct: 462 EGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI 521

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S ++D  CK GK+     LL+ M+  G  PN+ TYN+LIDGYC       AR L   M 
Sbjct: 522 YSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMI 581

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                    +Y  LI+   K+ + ++A  ++ +MLS G  P V  Y           +++
Sbjct: 582 KRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK 641

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A  L  +M    +  DT  Y  FID   + G +  A  + + + +   E +  +Y+CLI
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701

Query: 506 DGL 508
             L
Sbjct: 702 KHL 704



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 199/449 (44%), Gaps = 38/449 (8%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           AL I   M   + SP   +   ++ G C  KN H    +SL  ++    L P++ T++IL
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIH--KAMSLLHKMLERKLQPNVVTYNIL 455

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G +   + +L  +  S   P+  T++  I  LC    + EA +LF   +    
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + +   Y+TLI+G C+ G       L ++M +        C PN++TYN++IDG CKE  
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG------CVPNSITYNSLIDGYCKEKN 569

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +A+ L   M   +I P   TYT +I      +++++A  +F +M+  G  PDV  ++ 
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +   C +G++  A  L+  M  +G+ P+T  Y   ID Y     ID A  +   M   G
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689

Query: 389 CMHDVVSYNTLINWYCKNK-----------------------------DVEEALSLYSEM 419
           C     +Y+ LI      K                             D E  L L+ +M
Sbjct: 690 CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKM 749

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G  P   TY     GL ++  +E A +LFD M+    + +   YN+ +   C+ G  
Sbjct: 750 AEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLY 809

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EA+     + ++++  ++ S   L+ GL
Sbjct: 810 GEAIRWLDIMIENRHLPHLDSCKLLLCGL 838



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 191/467 (40%), Gaps = 70/467 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL     K     +   L   +N +GL PD +T+S+ I+  CK G V     +
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N V +++LI G C   ++ +   L  K     C P+  TYN+LI+G C+
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A  L + M   + E      P   TY  +ID L K+   D+A ++F +M     
Sbjct: 567 EKNFKEARLLVDIMIKRDIE------PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV  YT+ I  +C      +A+ L  +M  +G+ PD + +++ +D   + G +D A  
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680

Query: 345 LLELMIWRGVNPNTYTYNTLID---------------------GYCLTD------KIDH- 376
           +L+ M   G  P+ YTY+ LI                      G    D      ++D+ 
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYE 740

Query: 377 -ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
               LF  M  +GC  +  +Y   I   CK   +E A  L+  M  KG  P    YN+L 
Sbjct: 741 FTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800

Query: 436 -----------------------------------LGLFEIHQVERALKLFDEMRRNHVA 460
                                               GL++    E+A ++F    +    
Sbjct: 801 GCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYN 860

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            D   +   IDGL K G   +  +LF  +     +++  +Y+ LI+G
Sbjct: 861 YDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 141/344 (40%), Gaps = 36/344 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D M++     P   ++ IL   L K+  +D    +F ++ S G  PD++ ++  
Sbjct: 572 EARLLVDIMIK-RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAF 630

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +C  GR+    V++ ++      P+ + +T  I        I  A  +  +     C
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690

Query: 209 EPDVFTYNTLINGLCRTGHTIV-----------------------------ALNLFEEMA 239
           EP  +TY+ LI  L       V                              L+LF +MA
Sbjct: 691 EPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMA 750

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
               E G  C PN  TY   I GLCK G ++ A  LF  MK++  +P+   Y S++   C
Sbjct: 751 ----EHG--CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
               + EA R    M++    P + +  +++  L   G  +KA R+    +    N +  
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +  LIDG       D    LF  ME+ GC     +Y+ LI  +
Sbjct: 865 VWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 166/434 (38%), Gaps = 93/434 (21%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++    L K    +   SLF+ L   G+  +   +S LI+ +CK+G+VS G  +
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF------------------------ 200
           L ++L +   PN++T+ SLI G C E    EA  L                         
Sbjct: 542 LDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK 601

Query: 201 -----TKHRVF------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG------- 241
                  H +F         PDVF Y   I+  C  G    A  L  +M A G       
Sbjct: 602 DDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTML 661

Query: 242 --------------NGEFGVV-------CKPNTVTYNTIID------------------- 261
                         +G FG++       C+P+  TY+ +I                    
Sbjct: 662 YTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDL 721

Query: 262 --GLCKEGFVDKAK--------ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
             G+    F +  +        +LF KM +    P+  TY   I G C       A RLF
Sbjct: 722 SSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLF 781

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M ++G  P+   ++ ++   C+ G   +A R L++MI     P+  +   L+ G    
Sbjct: 782 DHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDE 841

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
              + A+++F S       +D + +  LI+   K    ++   L+  M ++G +    TY
Sbjct: 842 GNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTY 901

Query: 432 NTLFLGLFEIHQVE 445
           + L  G   I +++
Sbjct: 902 SMLIEGFDGIQEID 915


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 206/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N +   L K    +    L   + + GL P+  T +IL++ +CK+G +     V
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  + ++   P+  T+  LI GLC + +I EA  L  +       PDV TYNTLING   
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              ++    L ++M       G   KPN VTYN ++    KEG +D A     KM++   
Sbjct: 365 CSSSLKGFELIDKME------GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 418

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD VT+ ++I G+C A   +EA R+  EM  +G++ + VT + I+  LC   K+D A +
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 478

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL     RG   +  +Y TLI GY    K   A KL+  M+    +  +++YNT+I   C
Sbjct: 479 LLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLC 538

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +   ++++   +E+L  G+ P   TYNT+ LG     QVE+A +  ++M +     D +
Sbjct: 539 HSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLF 598

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T N  + GLC  G + +AL+LF         ++ V+YN +I GL
Sbjct: 599 TCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 219/425 (51%), Gaps = 12/425 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVL---SLFKRLNSAGLFPDIY 143
           P+ A  IF+ M R+H  P  ++  N L   L +     +V    ++F  +   G+  +  
Sbjct: 155 PHHAAQIFNRMKRLHLKPNLLTC-NTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTN 213

Query: 144 THSILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           T +ILI   C   ++S    ++G++   SCF P+ V++ +++  LC + ++ EA  L   
Sbjct: 214 TFNILIYGCCIENKLSEAIGLIGKMKDFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +     P+  T+N L++G C+ G    A  + + MA  N        P+  TYN +I G
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN------VLPDVWTYNMLIGG 326

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK+G +D+A  L  +M++  + PDVVTY ++I G    +   +   L  +M  +GV+P+
Sbjct: 327 LCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPN 386

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            VT++V++    K GKMD A   L  M   G +P+  T+NTLI+GYC   ++  A ++  
Sbjct: 387 AVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMD 446

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   G   + V+ NT+++  C  + +++A  L S    +G     V+Y TL +G F+  
Sbjct: 447 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDG 506

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +   A+KL+DEM+   +     TYN  I GLC SG   ++++    + +S    +  +YN
Sbjct: 507 KSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYN 566

Query: 503 CLIDG 507
            +I G
Sbjct: 567 TIILG 571



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 196/384 (51%), Gaps = 9/384 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV---VLGRILRSCFTPNAVTFTSLI 184
            +F R+    L P++ T + LIN   +       ++   +   +++     N  TF  LI
Sbjct: 160 QIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILI 219

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            G C E+++ EA  L  K + F+C PD  +YNT+++ LC+ G    A +L  +M N NG 
Sbjct: 220 YGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGL 278

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                 PN  T+N ++ G CK G++ +A ++   M   N+ PDV TY  +I G C     
Sbjct: 279 L-----PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKI 333

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           +EA RL  EM +  + PDVVT++ +++         K   L++ M  +GV PN  TYN +
Sbjct: 334 DEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVV 393

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +  Y    K+D+A      ME +G   D V++NTLIN YCK   + EA  +  EM  KG+
Sbjct: 394 VKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGL 453

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           K   VT NT+   L    +++ A KL     +     D  +Y   I G  K G  +EA++
Sbjct: 454 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMK 513

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L+  +++ +   +I++YN +I GL
Sbjct: 514 LWDEMKEKEIIPSIITYNTMIGGL 537



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 200/415 (48%), Gaps = 8/415 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D M + +   P V ++N+L G L K+   D    L   + +  L PD+ T++ L
Sbjct: 300 EAAQVIDLMAQ-NNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTL 358

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN          GF ++ ++      PNAVT+  ++K    E ++  A     K      
Sbjct: 359 INGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 418

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+NTLING C+ G    A  + +EM+          K N+VT NTI+  LC E  
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG------LKMNSVTLNTILHTLCGERK 472

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D A +L           D V+Y ++I G+       EA +L+ EM ++ + P ++T++ 
Sbjct: 473 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNT 532

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC +GK D++   L  ++  G+ P+  TYNT+I GYC   +++ A +    M    
Sbjct: 533 MIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+ + N L+   C    +++AL L++  +SKG     VTYNT+  GL +  + E A 
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAF 652

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYN 502
            L  EM    +  D YTYN  +  L  +G + EA E   R +   K +   +S N
Sbjct: 653 DLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLN 707



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 173/334 (51%), Gaps = 9/334 (2%)

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR---TGHTIVALNL 234
           V   + I    A +R   AA +F + +    +P++ T NTLIN L R        ++  +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F ++     + GV  K NT T+N +I G C E  + +A  L  KMKD +  PD V+Y ++
Sbjct: 200 FSDVI----KLGV--KVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTI 253

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +   C     NEA+ L ++M + G+ P+  TF++++   CK G + +A+++++LM    V
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+ +TYN LI G C   KID A +L   ME+   + DVV+YNTLIN         +   
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE 373

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L  +M  KG+KP  VTYN +     +  +++ A     +M  +  + D  T+N  I+G C
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+G + EA  +   +     ++N V+ N ++  L
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 467



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 30/284 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VS   ++ G     K  +  + L+  +    + P I T++ +I   C  G+       L 
Sbjct: 493 VSYGTLIMGYFKDGKSVE-AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLN 551

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L S   P+  T+ ++I G C E ++ +A     K    + +PD+FT N L+ GLC  G
Sbjct: 552 ELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEG 611

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL LF    +           + VTYNTII GLCKE   ++A +L  +M+++ + P
Sbjct: 612 MLDKALKLFNTWISKGKAI------DAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG-----------------------VQPDV 323
           D  TY +++     A    EA+     +++QG                         P+ 
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNS 725

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           VTFS  ++ELC  GK   A  +++    +G+  +  TY +L++G
Sbjct: 726 VTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEG 769


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 223/437 (51%), Gaps = 43/437 (9%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            +F +L   L +   +  V+ LF  L S G+     T+ ++++  C  G  +    ++ R
Sbjct: 20  QAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-R 78

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            L   +TP    +  +I GLC  SR+M+A  +  K    +  P+VFTY  L+NGLCR+  
Sbjct: 79  ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           T +A  +F+EM   NG     CKPN +TY T+I  L + G +D+A  + ++ +   +  D
Sbjct: 139 TKLAREVFQEMKR-NG-----CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI------------------ 329
           V+T T+++ G C A+  ++A +   EM   GV+P+ VT+S +                  
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 330 ------------------MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
                             +D LCK G +D+A + +E +   GV P+  TY+ LI+ +   
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            + D + +L   M  NG   DVV+Y+TLIN  CK +  ++A  L   M + G  P VVTY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N++  GL +  +++   ++++ M ++  + D  TY+  ++GL K+G +  A++LF  I+ 
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 492 SKYELNIVSYNCLIDGL 508
           S+   +  +Y+ +I  L
Sbjct: 433 SREGPDAAAYSMVITSL 449



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 182/386 (47%), Gaps = 42/386 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L +         + +++    + P+++T++IL+N  C+  +      V
Sbjct: 86  PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R+   PN +T+ +LI+ L     I EA  +  + R      DV T  T++ GLC+
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII------------------------ 260
                 AL   EEM     + GV  +PN VTY+ ++                        
Sbjct: 206 ASRLDDALKFMEEMR----QMGV--RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKG 259

Query: 261 ------------DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
                       D LCK G++D+A++   +++   + PDVVTY+ +I  F  A  ++ + 
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M   GV+PDVVT+S +++ LCK  K   A RLLELM   G  PN  TYN+++DG 
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGL 379

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C + K+D   +++  M  + C  DVV+Y+ ++N   K   ++ A+ L+  + S    P  
Sbjct: 380 CKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDA 439

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEM 454
             Y+ +   L    ++E A  ++  M
Sbjct: 440 AAYSMVITSLCRAGKLEEACGMYHGM 465



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 141/329 (42%), Gaps = 43/329 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M R    P P++ +  L   L++    D  L +     S  L  D+ T + ++   
Sbjct: 145 VFQEMKRNGCKPNPIT-YGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGL 203

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG-------------------------- 186
           CK  R+      +  + +    PN VT+++L+ G                          
Sbjct: 204 CKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263

Query: 187 ----------LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
                     LC    +  A     + R     PDV TY+ LIN   R G    +L L E
Sbjct: 264 AAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLE 323

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           +M   NG      KP+ VTY+T+I+ LCKE     A  L   M+     P+VVTY SV+ 
Sbjct: 324 DMRR-NG-----VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMD 377

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C +   +E  R++  M+     PDVVT+S+IM+ L K G +D A +L EL+      P
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +   Y+ +I   C   K++ A  ++  ME
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 16/240 (6%)

Query: 89  EALCIFDYM---------LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           +ALC   Y+         LR     P V ++++L    A+   +D  L L + +   G+ 
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+ T+S LIN  CK  +    F +L  +  +   PN VT+ S++ GLC   ++ E   +
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           +       C PDV TY+ ++NGL + G    A+ LFE + +          P+   Y+ +
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE------GPDAAAYSMV 445

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVV-TYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I  LC+ G +++A  ++  M+      ++      ++   C A   + A+R+     ++G
Sbjct: 446 ITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERG 505



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 1/202 (0%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK L   +++ G + D   F+++  +L +  K  +  RL  L+  RGV     TY  ++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C     + A +L   + S      V  YN +I   C+   V +A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V TY  L  GL   ++ + A ++F EM+RN    +  TY   I  L ++G + EAL + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
              R  +   ++++   ++ GL
Sbjct: 182 IEQRSLELPTDVITCTTIVGGL 203


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 212/420 (50%), Gaps = 9/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +   M+ +   P P++ +N L     +    +    +   + + G+  ++   + L
Sbjct: 294 EAKLMLLEMIDVGLKPEPIT-YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 352

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N  CK G++     ++  ++     P++ T++ LI+G C    +  A  L  + +    
Sbjct: 353 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 412

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P V TY+ +INGLCR G+      +  EM  NG        KPN V Y T++    KEG
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-------LKPNAVVYTTLMTAHAKEG 465

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++++ +  +M+++ I PDV  Y S+I GFC A    EA+   +EM+++ ++P+  T+ 
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 525

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +D   K G+M+ A R    M+  GV PN   Y  LI+G+C    +  A  +F  + S 
Sbjct: 526 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             + DV +Y+ LI+   +N  + EA  ++SE+  KG+ P   TYN+L  G  +   V++A
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L +EM    +  D  TYN  IDGLCK+G +  A  LF  I       N V+Y  ++DG
Sbjct: 646 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 705



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 213/433 (49%), Gaps = 34/433 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++L     + ++      L   +    L P + T+S++IN  C+ G +     +
Sbjct: 379 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 438

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   PNAV +T+L+     E R+ E+  +  + R     PDVF YN+LI G C+
Sbjct: 439 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 498

Query: 225 TGHTIVALNLFEEM--------ANGNGEF-----------------------GVVCKPNT 253
                 A     EM        A+  G F                       GV+  PN 
Sbjct: 499 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL--PNV 556

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             Y  +I+G CKEG V +A  +F  +    +  DV TY+ +I G       +EA  +F E
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           + ++G+ P+  T++ ++   CK G +DKAS+LLE M  +G+NP+  TYN LIDG C   +
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           I+ A+ LF  +E  G   + V+Y  +++ YCK+K+   A  L  EML +G+ P    YN 
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +     +  + E+AL LF EM     A+ T ++N  I+G CKSG + EA  L   + + +
Sbjct: 737 ILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795

Query: 494 YELNIVSYNCLID 506
           +  N V+Y  LID
Sbjct: 796 FIPNHVTYTSLID 808



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 208/423 (49%), Gaps = 27/423 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S N L G L K    +    +F  + +  + PD+YT++ +I+  CK+G V     V
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246

Query: 165 L------GRILRSC-----------FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L       R+L                P+  T+  LI G C E R  EA  +  +     
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--KPNTVTYNTIIDGLCK 265
            +P+  TYN LI+G  R G    A  + +EM        V C  + N + +NT+++G+CK
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEANLIIWNTLLNGVCK 358

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G ++KA E+  +M ++ + PD  TY+ +I G C   +   A  L  EM  + + P V+T
Sbjct: 359 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 418

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +SVI++ LC+ G +   + +L  M+  G+ PN   Y TL+  +    +++ +R +   M 
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G + DV  YN+LI  +CK K +EEA +   EML + ++P   TY     G  +  ++E
Sbjct: 479 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEME 538

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A + F+EM    V  +   Y   I+G CK G V EA  +FR I   +   ++ +Y+ LI
Sbjct: 539 IADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 598

Query: 506 DGL 508
            GL
Sbjct: 599 HGL 601



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 197/381 (51%), Gaps = 7/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++       +K    +     F  + S G+ P++  ++ LI   CK G V+  F V
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              IL      +  T++ LI GL    ++ EA  +F++ +     P+ FTYN+LI+G C+
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  L EEM            P+ VTYN +IDGLCK G +++AK LF  ++   +
Sbjct: 639 QGNVDKASQLLEEMCIKG------INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY +++ G+C + +   A +L  EM+ +GV PD   ++VI++  CK  K +KA  
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+ +G   +T ++NTLI+GYC + K+  A  L   M     + + V+Y +LI+  C
Sbjct: 753 LFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + EA  L+ EM  + + PT  TY +L  G   I  +     LF+EM    +  D  
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
           TY   ID  C+ G V+EA +L
Sbjct: 872 TYYVMIDAYCREGNVMEACKL 892



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 212/446 (47%), Gaps = 48/446 (10%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M+   P    +  L    AK    +    + +R+   G+ PD++ ++ LI  FCK  R+ 
Sbjct: 444 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 503

Query: 160 HGFVVLGRILRSCFTPNAVTF-----------------------------------TSLI 184
                L  +L     PNA T+                                   T+LI
Sbjct: 504 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 563

Query: 185 KGLCAESRIMEAAALFT---KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +G C E  + EA ++F      RV     DV TY+ LI+GL R G    A  +F E+   
Sbjct: 564 EGHCKEGNVTEAFSVFRFILSRRVLQ---DVQTYSVLIHGLSRNGKMHEAFGIFSELQ-- 618

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             E G++  PN  TYN++I G CK+G VDKA +L  +M  + INPD+VTY  +I G C A
Sbjct: 619 --EKGLL--PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
            +   AK LF ++  +G+ P+ VT++ ++D  CK+     A +LLE M+ RGV P+ + Y
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N +++  C  +K + A  LF  M   G     VS+NTLI  YCK+  ++EA  L  EM+ 
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           K   P  VTY +L     +   +  A +L+ EM+  +V     TY + + G    G + E
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDG 507
              LF  +     E + ++Y  +ID 
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDA 879



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 214/427 (50%), Gaps = 45/427 (10%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           K +  D  + L + +   GL PD+YT+ ILIN FC   R     ++L  ++     P  +
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFAC--EPDVFTYNTLINGLCRTGHTIVALNLFE 236
           T+ +LI G   +  I +A  +  K  + AC  E ++  +NTL+NG+C+ G    AL + +
Sbjct: 313 TYNALIDGFMRQGDIEQAFRI--KDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 370

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM     E GV  +P++ TY+ +I+G C+   + +A EL  +MK   + P V+TY+ +I 
Sbjct: 371 EMM----EKGV--EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C   +      +  EM+  G++P+ V ++ +M    K G+++++  +LE M  +G+ P
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484

Query: 357 NTYTYNTLIDGYCLTDKIDHAR-----------------------------------KLF 381
           + + YN+LI G+C   +++ AR                                   + F
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 544

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M S G + +V  Y  LI  +CK  +V EA S++  +LS+ +   V TY+ L  GL   
Sbjct: 545 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++  A  +F E++   +  + +TYN+ I G CK G V +A +L   +       +IV+Y
Sbjct: 605 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 664

Query: 502 NCLIDGL 508
           N LIDGL
Sbjct: 665 NILIDGL 671



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 185/390 (47%), Gaps = 14/390 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F ++L        V ++++L   L++N        +F  L   GL P+ +T++ L
Sbjct: 574 EAFSVFRFILSRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G V     +L  +      P+ VT+  LI GLC    I  A  LF        
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY  +++G C++ +   A  L EEM       GV   P+   YN I++  CKE  
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEML----LRGV--PPDAFIYNVILNFCCKEEK 746

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +KA +LF +M ++      V++ ++I G+C +    EA  L  EM+++   P+ VT++ 
Sbjct: 747 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CK G M +A RL   M  R V P   TY +L+ GY     +     LF  M + G
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI------KPTVVTYNTLFLGLFEIH 442
              D ++Y  +I+ YC+  +V EA  L  E+L KG+      +  + T + +  G     
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAG 925

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            ++ A ++   M +    ++T +  + +DG
Sbjct: 926 NMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 170/366 (46%), Gaps = 35/366 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  IF   L+     P   ++N L     K  + D    L + +   G+ PDI T++I
Sbjct: 608 HEAFGIFSE-LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G +     +   I     TPN VT+ +++ G C       A  L  +  +  
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG--------NGEFGVVCK--------- 250
             PD F YN ++N  C+      AL+LF+EM           N      CK         
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 786

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      PN VTY ++ID  CK G + +AK L+L+M++ N+ P   TYTS++ G+ 
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
              + +E   LF EM+ +G++PD +T+ V++D  C+ G + +A +L + ++ +G+   + 
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSG 906

Query: 360 ------TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
                 T + +  G+ +   +D A ++  SM   G + +  S   L++      + E++ 
Sbjct: 907 FRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSD 966

Query: 414 SLYSEM 419
           +L  +M
Sbjct: 967 NLLKQM 972



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 160/313 (51%), Gaps = 23/313 (7%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+   ++ L++   + G  + A+N+F  +   N EF    +P+ ++ N+++  L K   V
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEF----RPSLLSCNSLLGDLLKGNKV 205

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE---------------- 313
           +   ++F  M    + PDV TYT++I   C   +  +AKR+ +E                
Sbjct: 206 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKR 265

Query: 314 -MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M+D+G+ PD+ T+ ++++  C   +  +A  +L  MI  G+ P   TYN LIDG+    
Sbjct: 266 SMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 325

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            I+ A ++   M + G   +++ +NTL+N  CK   +E+AL +  EM+ KG++P   TY+
Sbjct: 326 DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYS 385

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  G      + RA +L DEM++  +A    TY+  I+GLC+ G +     + R +  +
Sbjct: 386 LLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN 445

Query: 493 KYELNIVSYNCLI 505
             + N V Y  L+
Sbjct: 446 GLKPNAVVYTTLM 458



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 146/275 (53%), Gaps = 17/275 (6%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           PN+V ++ ++D   K GF+ +A  +FL  K+    P +++  S++      N      ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR-LLEL----------------MIWRG 353
           F  M    V PDV T++ ++   CK G +  A R LLE+                M+ +G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           + P+ YTY+ LI+G+C+  +   A+ + + M   G   + ++YN LI+ + +  D+E+A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +  EM++ GI+  ++ +NTL  G+ +  ++E+AL++  EM    V  D+ TY+  I+G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C+   +  A EL   ++  K    +++Y+ +I+GL
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 215/391 (54%), Gaps = 18/391 (4%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
            LF ++   G+FP I T + L++  CK G +  G  +L ++L++   PN  TF   I+GL
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261

Query: 188 C-------AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
           C       A S+++EA     K      EPD FTYNT+I G  + G    A  + ++   
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD--- 318

Query: 241 GNGEF-GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
              +F G V  P+  TY ++I G+C++G +D A  LF +   + + P +V Y ++I+G  
Sbjct: 319 --AKFKGFV--PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLS 374

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 +A +L  +M  +G+ PD+ T++++++ LCK G +  A+ LL   I +G  P+ +
Sbjct: 375 QQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIF 434

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           T+NTLIDGYC   K+D+A  +  SM S+G   DV++YN+++N  CK    E+ +  +  +
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           + KG  P ++TYN L   L +  +V  AL L +E+R   +  D  ++   I G C +G +
Sbjct: 495 MEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDL 554

Query: 480 LEALELFRAIRDSKYEL--NIVSYNCLIDGL 508
            EA +LFR + + +Y +   + +YN +I+  
Sbjct: 555 DEAYQLFRRM-EQQYRICHTVATYNIMINAF 584



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 217/428 (50%), Gaps = 15/428 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ MLR+   P  +++FN L   L K  H      L  ++   G+ P+++T +I 
Sbjct: 199 EAYELFNKMLRLGIFPH-IATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257

Query: 149 INCFCKMG-------RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           I   C+ G       +V      L +++     P+  T+ ++I G     +I +A+ +  
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +     PD FTY +LI G+C+ G    AL LFEE A G G      KP+ V YNT+I 
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEE-ALGKG-----LKPSIVLYNTLIK 371

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GL ++G V KA +L   M  E ++PD+ TY  VI G C     ++A  L    + +G  P
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D+ TF+ ++D  CK  KMD A  +L+ M   GV P+  TYN++++G C   K +   + F
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             +   GC+ ++++YN LI   CK + V EAL L  E+ ++G+ P  V++ T+  G    
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551

Query: 442 HQVERALKLFDEMRRNHVAADTY-TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             ++ A +LF  M + +    T  TYN  I+   +   +  A +LF  + D   + +  +
Sbjct: 552 GDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYT 611

Query: 501 YNCLIDGL 508
           Y  +IDG 
Sbjct: 612 YRVMIDGF 619



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 215/429 (50%), Gaps = 16/429 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F+ M   +   P + S+N +   L +  +++    ++ R+   G+ PD+ T +I
Sbjct: 93  QEAVDVFERM-DFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTI 151

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I  FC+  R      +L  +       NAV + ++I G   E+  +EA  LF K     
Sbjct: 152 RIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLG 211

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             P + T+N L++ LC+ GH      L  + + NG      VC PN  T+N  I GLC++
Sbjct: 212 IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNG------VC-PNLFTFNIFIQGLCRK 264

Query: 267 GFVD-------KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           G ++       +A+    KM ++ + PD  TY ++I G+       +A R+  +   +G 
Sbjct: 265 GVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGF 324

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD  T+  ++  +C++G +D A  L E  + +G+ P+   YNTLI G      +  A +
Sbjct: 325 VPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQ 384

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M   G   D+ +YN +IN  CK   V +A +L +  ++KG  P + T+NTL  G  
Sbjct: 385 LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC 444

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  +++ A+ + D M  + V  D  TYN+ ++GLCK+    + +E F+ I +     NI+
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504

Query: 500 SYNCLIDGL 508
           +YN LI+ L
Sbjct: 505 TYNILIESL 513



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 187/363 (51%), Gaps = 13/363 (3%)

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           + + G+V     V  R+      P+  ++ +++  L       +A  ++ + +     PD
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V T+   I   CRT   + AL L   M +        C+ N V Y T+I G  +E +  +
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQG------CELNAVVYCTVISGFYEENYQVE 199

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ELF KM    I P + T+  ++   C      E ++L  +++  GV P++ TF++ + 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 332 ELCKNG-------KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            LC+ G       K+ +A   L  M+ +G+ P+ +TYNT+I GY    KI  A ++    
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  G + D  +Y +LI   C++ D++ AL+L+ E L KG+KP++V YNTL  GL +   V
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
            +AL+L ++M +  ++ D +TYN  I+GLCK G V +A  L  A     Y  +I ++N L
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439

Query: 505 IDG 507
           IDG
Sbjct: 440 IDG 442



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 192/395 (48%), Gaps = 18/395 (4%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GDI+      AL +F+  L      P +  +N L   L++       L L   ++  G+ 
Sbjct: 342 GDID-----HALALFEEALG-KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMS 395

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PDI+T++++IN  CKMG VS    +L   +   + P+  TF +LI G C   ++  A  +
Sbjct: 396 PDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGI 455

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
                     PDV TYN+++NGLC+       +  F+ +          C PN +TYN +
Sbjct: 456 LDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG------CLPNIITYNIL 509

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-G 318
           I+ LCK   V +A +L  ++++  + PD V++ +VI GFC   D +EA +LF  M  Q  
Sbjct: 510 IESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYR 569

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +   V T++++++   +   MD A +L   M  +G +P++YTY  +IDG+C    ++   
Sbjct: 570 ICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGY 629

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
              +     G +  + ++  +IN  C    V EA+ +   M+  G+ P  V   T+F   
Sbjct: 630 DFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV--TIFDAD 687

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +     + + + D ++++H+    Y Y    DG+
Sbjct: 688 KKAVAAPKII-VEDLLKKSHIT--YYAYELLYDGI 719



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 139/286 (48%), Gaps = 15/286 (5%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
           AL++F  +   +G      K   +TY  +I+ L   G  D  + + ++M+  N++  ++ 
Sbjct: 23  ALSIFNSVKKEDG-----FKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR-LNVDNSLLE 76

Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y S +R +       EA  +F  M     +P + +++ IM+ L + G  ++A ++   
Sbjct: 77  GVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLR 136

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ P+  T+   I  +C T +   A +L  +M S GC  + V Y T+I+ + +   
Sbjct: 137 MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENY 196

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
             EA  L+++ML  GI P + T+N L   L +   ++   KL +++ +N V  + +T+N 
Sbjct: 197 QVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256

Query: 469 FIDGLCKSGF-------VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           FI GLC+ G        V+EA      + +   E +  +YN +I G
Sbjct: 257 FIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 6/242 (2%)

Query: 271 KAKELFLKMKDEN-INPDVVTYTSVIRGFCYANDWNEAKRLFIEM---MDQGVQPDVVTF 326
           KA  +F  +K E+      +TY  +I    +  +++  +R+ +EM   +D  +   V  +
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGV--Y 79

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
              M    + GK+ +A  + E M +    P+ ++YN +++        + A K+++ M+ 
Sbjct: 80  VSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKH 139

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV ++   I  +C+ K    AL L + M S+G +   V Y T+  G +E +    
Sbjct: 140 EGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE 199

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +LF++M R  +     T+N  +  LCK G + E  +L   +  +    N+ ++N  I 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 507 GL 508
           GL
Sbjct: 260 GL 261


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 209/407 (51%), Gaps = 17/407 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRL---NSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           ++S+N L  CL++    D ++SL+K +   N   +FP++ T + ++N +CK+G ++   +
Sbjct: 151 LTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARL 210

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP--DVFTYNTLING 221
              RILR    P+  T+TSL+ G C    +  A        VF   P  +  +Y  LI+G
Sbjct: 211 FFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACG------VFCVMPRRNAVSYTNLIHG 264

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC  G    AL  +  M          C P   TY  ++  LC+ G   +A  LF +M++
Sbjct: 265 LCEAGKLHEALEFWARMREDG------CFPTVRTYTVLVCALCESGRELEALSLFGEMRE 318

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+V TYT +I   C     +EA ++  EM+++GV P VV F+ ++   CK G M+ 
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +L LM  + V PN  TYN LI G+C    +D A  L   M  +    DVV+YNTLI+
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+   V+ A  L+  M+  G  P   T+N   + L  + +V  A ++ + ++  HV A
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + + Y   IDG CK+G +  A  LF+ +   +   N +++N +IDGL
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 202/406 (49%), Gaps = 7/406 (1%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P    VS  N++ G     K ++  L  + R+   G FP + T+++L+   C+ GR    
Sbjct: 251 PRRNAVSYTNLIHGLCEAGKLHEA-LEFWARMREDGCFPTVRTYTVLVCALCESGRELEA 309

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             + G +      PN  T+T LI  LC E R+ EA  +  +       P V  +N LI  
Sbjct: 310 LSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGS 369

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G    A+ +      G  E   VC PN  TYN +I G C+   +D+A  L  KM +
Sbjct: 370 YCKRGMMEDAVGVL-----GLMESKKVC-PNVRTYNELICGFCRGKSMDRAMALLNKMVE 423

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             ++PDVVTY ++I G C     + A RLF  M+  G  PD  TF+  M  LC+ G++ +
Sbjct: 424 SKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGE 483

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A ++LE +  + V  N + Y  LIDGYC   KI+HA  LF  M +  C+ + +++N +I+
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              K   V++A+ L  +M    +KPT+ TYN L   + + +  +RA ++ + +  +    
Sbjct: 544 GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQP 603

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  TY  FI   C  G + EA E+   I++    L+   YN LI+ 
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINA 649



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 234/457 (51%), Gaps = 49/457 (10%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK-------------------HYDT-V 126
           P  AL  F ++ R H  P  +++ + L   L +++                   H  T +
Sbjct: 66  PLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFL 125

Query: 127 LSLFKRLNSAGLFPD----------IYTHSILINCFCKMGRVSHGFVVLGRIL----RSC 172
           L+L +R+N+A    D          + +++ L+ C  +   V     +   +L     S 
Sbjct: 126 LNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSV 185

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP--DVFTYNTLINGLCRTGHTIV 230
           F PN +T  +++   C    +  A   F   R+  CEP  D+FTY +L+ G CR      
Sbjct: 186 F-PNLITLNTMLNSYCKLGNMAVARLFFV--RILRCEPGPDLFTYTSLVLGYCRN----- 237

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
                +++    G F V+ + N V+Y  +I GLC+ G + +A E + +M+++   P V T
Sbjct: 238 -----DDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRT 292

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YT ++   C +    EA  LF EM ++G +P+V T++V++D LCK G+MD+A ++L  M+
Sbjct: 293 YTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV 352

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            +GV P+   +N LI  YC    ++ A  +   MES     +V +YN LI  +C+ K ++
Sbjct: 353 EKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMD 412

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            A++L ++M+   + P VVTYNTL  GL E+  V+ A +LF  M R+  + D +T+N F+
Sbjct: 413 RAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFM 472

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LC+ G V EA ++  ++++   + N  +Y  LIDG
Sbjct: 473 VCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDG 509



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 189/404 (46%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L   L ++      LSLF  +   G  P++YT+++LI+  CK GR+     +
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKM 347

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+ V F +LI   C    + +A  +          P+V TYN LI G CR
Sbjct: 348 LNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCR 407

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L  +M            P+ VTYNT+I GLC+ G VD A  LF  M  +  
Sbjct: 408 GKSMDRAMALLNKMVESK------LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGF 461

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD  T+ + +   C      EA ++   + ++ V+ +   ++ ++D  CK GK++ A+ 
Sbjct: 462 SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAAS 521

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+     PN+ T+N +IDG     K+  A  L   M        + +YN L+    
Sbjct: 522 LFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVL 581

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D + A  + + ++S G +P VVTY           ++E A ++  +++   V  D++
Sbjct: 582 KEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSF 641

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  I+     G +  A  + R +  +  E + ++Y+ L+  L
Sbjct: 642 IYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 212/485 (43%), Gaps = 71/485 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+ + + M+    SP  V ++N L   L +    D+   LF+ +   G  PD +T + 
Sbjct: 412 DRAMALLNKMVESKLSPD-VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNA 470

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            + C C+MGRV     +L  +       N   +T+LI G C   +I  AA+LF +     
Sbjct: 471 FMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE 530

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  T+N +I+GL + G    A+ L E+MA    +F V  KP   TYN +++ + KE 
Sbjct: 531 CLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA----KFDV--KPTLHTYNILVEEVLKEY 584

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A E+  ++      P+VVTYT+ I+ +C      EA+ + I++ ++GV  D   ++
Sbjct: 585 DFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYN 644

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL----------------------- 364
           ++++     G +D A  +L  M   G  P+  TY+ L                       
Sbjct: 645 LLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSL 704

Query: 365 ----IDGYCLTDKIDHA--RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
               +D   +  KID      LF  M   GC+ ++ +Y+ LIN  CK   +  A SLY  
Sbjct: 705 TNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764

Query: 419 MLSKGIKPTVVTYNTLF-----------------------------------LGLFEIHQ 443
           M   GI P+ + +N+L                                     GLFE   
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMN 824

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            E+A  +F  + R     D   +   IDGL K+G+V +  EL   +  +   L+  +Y+ 
Sbjct: 825 KEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSM 884

Query: 504 LIDGL 508
           L+  L
Sbjct: 885 LMQEL 889



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 197/433 (45%), Gaps = 35/433 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     + K  D  ++L  ++  + L PD+ T++ LI+  C++G V     +
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R  F+P+  TF + +  LC   R+ EA  +    +    + +   Y  LI+G C+
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +LF+ M          C PN++T+N +IDGL KEG V  A  L   M   ++
Sbjct: 513 AGKIEHAASLFKRM------LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P + TY  ++       D++ A  +   ++  G QP+VVT++  +   C  G++++A  
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI---- 400
           ++  +   GV  +++ YN LI+ Y     +D A  +   M   GC    ++Y+ L+    
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686

Query: 401 -------------------NWYCKNKDVEEALS------LYSEMLSKGIKPTVVTYNTLF 435
                              N    N D+   +       L+ +M   G  P + TY+ L 
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLI 746

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL ++ ++  A  L+  MR   ++     +N+ +   CK G   EA+ L  ++ +  + 
Sbjct: 747 NGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHL 806

Query: 496 LNIVSYNCLIDGL 508
            ++ SY  LI GL
Sbjct: 807 AHLESYKLLICGL 819


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 42/432 (9%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R H  P  V + N +     +   +     +F  +  AG+ PD  +   L+   C+ G+
Sbjct: 137 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 196

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     +L  + R  F+ +  T T +++ LC + R  + +  F +       P+V  Y  
Sbjct: 197 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 256

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            I+GLC+  +   A ++ EEM  G G      KPN  T+ T+IDGLCK G+ ++A  LFL
Sbjct: 257 WIDGLCKRRYVKQAFHVLEEMV-GRG-----LKPNVYTHTTLIDGLCKIGWTERAFRLFL 310

Query: 278 KM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
           K+ K  +  P+V TYT +I G+C       A+ L + M++QG++P+  T++ ++   CK 
Sbjct: 311 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG 370

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK----------------- 379
           G  D+A  L+  M   G  PN YTYN +IDG+C   KI  A K                 
Sbjct: 371 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 430

Query: 380 ------------------LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
                             LF  M  NGC  D+ +Y +LI+ YC+ + +EE+   + + L 
Sbjct: 431 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 490

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G+ PT  TY ++  G  ++ +   AL++F+ M +N   AD+ TY   I GLCK   + E
Sbjct: 491 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 550

Query: 482 ALELFRAIRDSK 493
           A  L+  + D +
Sbjct: 551 AKALYEGMLDKR 562



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 193/405 (47%), Gaps = 10/405 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           +PP V ++      L K ++      + + +   GL P++YTH+ LI+  CK+G     F
Sbjct: 247 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 306

Query: 163 VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
            +  ++++S  + PN  T+T +I G C E ++  A  L  +      +P+  TY TLI G
Sbjct: 307 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 366

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G    A  L  +M     + G +  PN  TYN +IDG CK+G + +A ++      
Sbjct: 367 HCKGGSFDRAFELMNKMK----QEGFL--PNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + +  D +TYT +I   C       A  LF  M++ G  PD+  ++ ++   C+  +M++
Sbjct: 421 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 480

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           + +  +  +  G+ P   TY ++I GYC   +   A ++F  M  NGC  D ++Y  LI+
Sbjct: 481 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 540

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   +EEA +LY  ML K + P  VT  TL        +   A+ + D + +     
Sbjct: 541 GLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ--- 597

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +T +  +  L   G V  A    + + D  Y ++  +Y   I+
Sbjct: 598 QVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN 642



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 6/306 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             A  +F  +++     P V ++ ++ G   +         L  R+   GL P+  T++ 
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   CK G     F ++ ++ +  F PN  T+ ++I G C + +I EA  +        
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  TY  LI   C+ GH   AL+LF+ M   NG     C P+   Y ++I   C++ 
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMVE-NG-----CCPDIEAYTSLISTYCQQR 476

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++++++ F K     + P   TYTS+I G+C       A R+F  M+  G   D +T+ 
Sbjct: 477 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 536

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK  ++++A  L E M+ + + P   T  TL   YC  +K   A  +   ++  
Sbjct: 537 ALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR 596

Query: 388 GCMHDV 393
             +H V
Sbjct: 597 QQVHTV 602



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 3/251 (1%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++    + G + +A ++ L+M+   +   V T   V+R       +  A+++F  M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHA 377
           V PD  +F  ++   C+ GK+++   LL  M WR G + +  T   ++   C   +    
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAM-WRYGFSLDNATCTVVVRSLCEKGRFKDV 235

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            + F  M   G   +VV+Y   I+  CK + V++A  +  EM+ +G+KP V T+ TL  G
Sbjct: 236 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 295

Query: 438 LFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           L +I   ERA +LF ++ + +    + +TY   I G C+ G +  A  L   + +   + 
Sbjct: 296 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 355

Query: 497 NIVSYNCLIDG 507
           N  +Y  LI G
Sbjct: 356 NTNTYTTLIGG 366



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 73/172 (42%)

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++ +A+ ++  M   G+     T N ++     T    +ARK+F  M   G   D  S+
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 184

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
             L+   C+   VEE  +L + M   G      T   +   L E  + +   + F  M  
Sbjct: 185 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 244

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                +   Y  +IDGLCK  +V +A  +   +     + N+ ++  LIDGL
Sbjct: 245 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 196/384 (51%), Gaps = 12/384 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++R H    P  S   LF  L K        + ++ +   G  PD+   ++L++  CK  
Sbjct: 180 LVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEH 239

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKHRVFACEPDVF 213
           +++   ++ G I +    P  V+F +LI G C    + +   L     ++RVF   PDVF
Sbjct: 240 KINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVF 296

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY+ LINGLC+ G    A  LF EM +     G+V  PN VT+ T+I+G C  G  D   
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDR----GLV--PNDVTFTTLINGHCVTGRADLGM 350

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           E++ +M  + + PDV+TY ++I G C   D  EAK+L IEM  +G++PD  T+++++D  
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK G ++ A  + + M+  G+  +   +  LI G+C   ++  A +    M   G   D 
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +Y  +I+ +CK  DV+    L  EM   G  P VVTYN L  GL +  Q++ A  L D 
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 454 MRRNHVAADTYTYNNFIDGLCKSG 477
           M    V  D  TYN  ++G CK G
Sbjct: 531 MLNLGVVPDDITYNILLEGHCKHG 554



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 223/460 (48%), Gaps = 11/460 (2%)

Query: 53  KESLRLTVKDRASLKKFL-KERCKSSGQGDINLITP----NEALCIFDYMLRMHPSPPPV 107
           +   RL++    ++  FL   +  S  Q  +  +      N A  +F  +L    +    
Sbjct: 96  QHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSN 155

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
             F++L      + ++   +  F+ +    L    ++   L +   K+   S  +     
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           IL   + P+   F  L+  LC E +I EA  LF +       P V ++NTLING C++G+
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L   M   N  F     P+  TY+ +I+GLCKEG +D A +LFL+M D  + P+
Sbjct: 276 LDQGFRLKRFMME-NRVF-----PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VT+T++I G C     +    ++ +M+ +GV+PDV+T++ +++ LCK G + +A +L+ 
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  RG+ P+ +TY  LIDG C    ++ A ++   M   G   D V++  LI+ +C+  
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREG 449

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V EA     EML  GIKP   TY  +  G  +   V+   KL  EM+ +       TYN
Sbjct: 450 QVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYN 509

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++GLCK G +  A  L  A+ +     + ++YN L++G
Sbjct: 510 VLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEG 549



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 172/330 (52%), Gaps = 9/330 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN L     K+ + D    L + +    +FPD++T+S+LIN  CK G++     +
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN VTFT+LI G C   R      ++ +      +PDV TYNTLINGLC+
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L  EM           KP+  TY  +IDG CKEG ++ A E+  +M  E I
Sbjct: 378 VGDLREAKKLVIEMTQRG------LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V +T++I GFC      EA+R   EM++ G++PD  T+++++   CK G +    +
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFK 491

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G  P   TYN L++G C   ++ +A  L  +M + G + D ++YN L+  +C
Sbjct: 492 LLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           K+ + E+   L SE   KG+     +Y +L
Sbjct: 552 KHGNREDFDKLQSE---KGLVQDYGSYTSL 578



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 160/299 (53%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV  +N L++ LC+      A  LF E+    G+ G+  +P  V++NT+I+G CK G +
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEI----GKRGL--RPTVVSFNTLINGYCKSGNL 276

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+   L   M +  + PDV TY+ +I G C     ++A +LF+EM D+G+ P+ VTF+ +
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  C  G+ D    + + M+ +GV P+  TYNTLI+G C    +  A+KL + M   G 
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D  +Y  LI+  CK  D+E AL +  EM+ +GI+   V +  L  G     QV  A +
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EM    +  D  TY   I G CK G V    +L + ++   +   +V+YN L++GL
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 109/220 (49%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           + ++ ++  +  +  +++A + F  +    +Q    +   + D L K      A    E 
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G  P+   +N L+   C   KI+ A+ LF  +   G    VVS+NTLIN YCK+ +
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++   L   M+   + P V TY+ L  GL +  Q++ A KLF EM    +  +  T+  
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I+G C +G     +E+++ +     + ++++YN LI+GL
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 210/387 (54%), Gaps = 7/387 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L    A     +    L   ++ +G+ PDI+ ++ +I+C  K G++      
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I      P+AVTF + I G     ++ EAA  F +       P+   Y  LING  +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+ + AL++F  +       GV+  P+  T +  I GL K G V +A ++F ++K++ +
Sbjct: 303 AGNLMEALSIFRHLH----ALGVL--PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 356

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV TY+S+I GFC   +  +A  L  EM  +G+ P++  ++ ++D LCK+G + +A +
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 416

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G+ P++ TY+T+IDGYC ++ +  A  LF  M S G       YN L++  C
Sbjct: 417 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCC 476

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D+E+A++L+ EML KG   T +++NTL  G  +  +++ A +LF EM    +  D  
Sbjct: 477 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRD 491
           TY   ID  CK+G + EA  LF+ +++
Sbjct: 536 TYTTVIDWHCKAGKMEEANLLFKEMQE 562



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 216/417 (51%), Gaps = 8/417 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D M + +  P  VS +  +   L   K       L +++  +GL P++  +S LI
Sbjct: 134 ALELLDEMEKRNLVPSAVS-YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 192

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             +   GR+     +L  +  S   P+   + ++I  L    ++ EA+    + +    +
Sbjct: 193 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 252

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD  T+   I G  +TG    A   F+EM +     G++  PN   Y  +I+G  K G +
Sbjct: 253 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLD----HGLM--PNNPLYTVLINGHFKAGNL 306

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  +F  +    + PDV T ++ I G        EA ++F E+ ++G+ PDV T+S +
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G+++KA  L + M  +G+ PN + YN L+DG C +  I  ARKLF  M   G 
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D V+Y+T+I+ YCK+++V EA SL+ EM SKG++P    YN L  G  +   +E+A+ 
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           LF EM +   A  T ++N  IDG CKS  + EA +LF+ +   +   + V+Y  +ID
Sbjct: 487 LFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 212/420 (50%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA   F+ M +    P   ++ + L     +    D VL +   + S G+  ++ T+++
Sbjct: 27  NEAKLTFEEMQKTGLKPD-YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 85

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G++     +L  ++     PN+ TF  LI+G C E  +  A  L  +     
Sbjct: 86  LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 145

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   +Y  +INGLC      +A  L E+M           KPN V Y+T+I G   EG
Sbjct: 146 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVVYSTLIMGYASEG 199

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A+ L   M    + PD+  Y ++I     A    EA    +E+  +G++PD VTF 
Sbjct: 200 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +    K GKM +A++  + M+  G+ PN   Y  LI+G+     +  A  +F  + + 
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHAL 319

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV + +  I+   KN  V+EAL ++SE+  KG+ P V TY++L  G  +  +VE+A
Sbjct: 320 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 379

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L DEM    +A + + YN  +DGLCKSG +  A +LF  + +   E + V+Y+ +IDG
Sbjct: 380 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 439



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 204/405 (50%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ I+   L + K  +     F+ +   GL PD    S LI+ F + G +    + 
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE-VLR 66

Query: 165 LGRILRSCFTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  ++ SC  P N +T+  LI GLC   ++ +AA +        C+P+  T+  LI G C
Sbjct: 67  IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R  +   AL L +EM   N        P+ V+Y  +I+GLC    +  A +L  KM    
Sbjct: 127 REHNMGRALELLDEMEKRN------LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+VV Y+++I G+       EA+RL   M   GV PD+  ++ I+  L K GKM++AS
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L  +  RG+ P+  T+   I GY  T K+  A K F  M  +G M +   Y  LIN +
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  ++ EALS++  + + G+ P V T +    GL +  +V+ ALK+F E++   +  D 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +TY++ I G CK G V +A EL   +       NI  YN L+DGL
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 200/401 (49%), Gaps = 25/401 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL IF + L      P V + +     L KN      L +F  L   GL PD++T+S L
Sbjct: 308 EALSIFRH-LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 366

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK G V   F +   +      PN   + +L+ GLC    I  A  LF        
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           EPD  TY+T+I+G C++ +   A +LF EM +     GV  +P++  YN ++ G CKEG 
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK----GV--QPHSFVYNALVHGCCKEGD 480

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++KA  LF +M  +      +++ ++I G+C +    EA +LF EM+ + + PD VT++ 
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 329 IMDELCKNGKMDKAS-----------------RLLELMIWRGVNPNTYTYNTLIDGYCLT 371
           ++D  CK GKM++A+                  L E M+ +GV P+  TY  +I  +C  
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           D +  A KL   +   G +     ++ LI   CK +D+ EA  L  EM   G+KP++   
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           +TL     E  +++ A ++F+ ++   +  DT T  + ++G
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 201/438 (45%), Gaps = 59/438 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F       +K          F  +   GL P+   +++LIN   K G +     +
Sbjct: 253 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 312

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T ++ I GL    R+ EA  +F++ +     PDVFTY++LI+G C+
Sbjct: 313 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 372

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM       G+   PN   YN ++DGLCK G + +A++LF  M ++ +
Sbjct: 373 QGEVEKAFELHDEMCLK----GIA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY+++I G+C + +  EA  LF EM  +GVQP    ++ ++   CK G M+KA  
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M+ +G    T ++NTLIDGYC + KI  A +LF  M +   M D V+Y T+I+W+C
Sbjct: 487 LFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 545

Query: 405 KNKDVEEA-----------------LSLYSEMLSKGIKPTVVTY---------------- 431
           K   +EEA                  +L+ +M++KG+KP  VTY                
Sbjct: 546 KAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605

Query: 432 -------------------NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
                              + L   L +   +  A KL DEM    +       +  +  
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 665

Query: 473 LCKSGFVLEALELFRAIR 490
             ++G + EA  +F  ++
Sbjct: 666 FHEAGKMDEATRVFEGVK 683



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 143/265 (53%), Gaps = 2/265 (0%)

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
           GE G+V  PNT TY  I  GLC+   +++AK  F +M+   + PD    +++I GF    
Sbjct: 2   GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           D +E  R+   M+  G+  +++T++V++  LCK GKM+KA+ +L+ MI  G  PN+ T+ 
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI+GYC    +  A +L   ME    +   VSY  +IN  C  KD+  A  L  +M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G+KP VV Y+TL +G     ++E A +L D M  + VA D + YN  I  L K+G + EA
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
                 I+    + + V++   I G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILG 264


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 209/420 (49%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A  +F+ M +       VS  N++ G L +    D  +++FK++     +P + T+++
Sbjct: 21  NSAFSVFNMMPKKGCRRNEVSYTNLIHG-LCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++   + GR      +   +      PN  T+T +I  +C E+++ E   +  +     
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P V TYN LI+G C+ G    A  + + M + +      C PN  TYN +I G C++ 
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS------CNPNERTYNELICGFCRKK 193

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A  L  KM +  + P VVTY S+I G C     + A RL   M + GV PD  T+S
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V +D LCK G++++A+ L   +  +G+  N   Y  LIDGYC   K+D A  L   M + 
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C+ +  +YN LI+  CK + V+EAL L   M+ KG+K TV TY  L + + +    + A
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYA 373

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++ D+M  +    D Y Y  FI   C  G + EA ++   + +     + ++Y  +ID 
Sbjct: 374 HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 178/294 (60%), Gaps = 5/294 (1%)

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVV----CKPNTVTYNTIIDGLCKEGFVDKAK 273
           ++NG C+ G+ + A NL  ++ +    F ++    C+ N V+Y  +I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGNLVEA-NLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +F KM++++  P V TYT ++     +    EA  LF EM ++G +P++ T++V+++ +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  K+++  R+L+ M+ +G+ P+  TYN LIDGYC    ++ A+++   M SN C  + 
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +YN LI  +C+ K+V  A++L S+ML   + P+VVTYN+L  G  +I  ++ A +L + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           M  N V  D +TY+ FID LCK G + EA  LF ++++   + N V Y  LIDG
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDG 293



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 197/421 (46%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E + IF  M R     P V ++ ++   L ++      ++LF  +   G  P+I+T+++
Sbjct: 56  DEGINIFKKM-REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTV 114

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  CK  ++  G  +L  ++     P+  T+ +LI G C E  +  A  +       +
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TYN LI G CR  +   A+ L  +M            P+ VTYN++I G CK G
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESR------LTPSVVTYNSLIHGQCKIG 228

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
           ++D A  L   M +  + PD  TY+  I   C      EA  LF  + ++G++ + V ++
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK GKMD A+ LL+ M+     PN+ TYN LIDG C   K+  A  L  SM   
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    V +Y  LI    K  D + A  +  +M+S G +P V  Y            ++ A
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +   M    V  D  TY   ID     G +  A ++ + + D+  + +  +Y+CLI  
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKH 468

Query: 508 L 508
           L
Sbjct: 469 L 469



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 201/479 (41%), Gaps = 65/479 (13%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M R     P + ++ ++   + K    +    +   +   GL P + T++ L
Sbjct: 92  EAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +CK G V     +L  +  +   PN  T+  LI G C +  +  A AL +K      
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------------------------- 243
            P V TYN+LI+G C+ G+   A  L   M N NG                         
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLM-NENGVVPDQWTYSVFIDTLCKKGRIEEAN 269

Query: 244 -------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
                  E G+  K N V Y  +IDG CK G +D A  L  +M  E+  P+  TY ++I 
Sbjct: 270 VLFNSLKEKGI--KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALID 327

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C      EA  L   M+ +G++  V T+++++  + K G  D A R+L+ M+  G  P
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQP 387

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           + Y Y   I  +C    I  A  +   M   G M D ++Y  +I+ Y     +  A  + 
Sbjct: 388 DVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVL 447

Query: 417 SEMLSKGIKPTVVTYNTLFLGL-----------------------------FEIHQVERA 447
             M   G  P+  TY+ L   L                             +++ + E A
Sbjct: 448 KRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETA 507

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           L+LF++M  +  + +  TY   I GLCK G +  A +LF  + +     +   YN L++
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 188/462 (40%), Gaps = 58/462 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     K  + D+   L   +N  G+ PD +T+S+ I+  CK GR+    V+
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N V +T+LI G C   ++ +A +L  +     C P+  TYN LI+GLC+
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331

Query: 225 TGHTIVALNLFEEMANGN------------------GEFGVVCK-----------PNTVT 255
                 AL L E M                      G+F    +           P+   
Sbjct: 332 ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYI 391

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y   I   C  G + +A+++   M +  + PD +TYT VI  +      N A  +   M 
Sbjct: 392 YTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMF 451

Query: 316 DQGVQPDVVTFSVIMDELCKNG-----------------------------KMDKASRLL 346
           D G  P   T+S ++  L K                               K + A  L 
Sbjct: 452 DTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELF 511

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M+  G +PN  TY  LI G C   ++  A+KLF  M   G       YN+L+N  C+ 
Sbjct: 512 EKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCEL 571

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
               +A+ L   M+  G  P + + N LF GL+E    E+A  +F  + +     D   +
Sbjct: 572 GIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAW 631

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              IDGL K+G      EL   +     +++  +Y  LI+GL
Sbjct: 632 KILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 161/335 (48%), Gaps = 15/335 (4%)

Query: 183 LIKGLCAESRIMEAA---------ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           ++ G C    ++EA          ++F       C  +  +Y  LI+GLC  G     +N
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           +F++M   +      C P   TY  I+  L + G   +A  LF +M++    P++ TYT 
Sbjct: 61  IFKKMREDD------CYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTV 114

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I   C      E +R+  EM+++G+ P V T++ ++D  CK G ++ A  +L+LM    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            NPN  TYN LI G+C    +  A  L   M  +     VV+YN+LI+  CK   ++ A 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L + M   G+ P   TY+     L +  ++E A  LF+ ++   + A+   Y   IDG 
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK+G + +A  L   +       N  +YN LIDGL
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 17/179 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +F+ ML  H   P ++++  L   L K         LF  +N  G+ P    ++ L+
Sbjct: 507 ALELFEKMLE-HGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NC C++G       ++G ++     P   +   L  GL  E    +A  +F+        
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVV----CKPNTVTYNTIIDGL 263
            D   +  LI+GL + G           +++G  E  GV+    C+ +  TY  +I+GL
Sbjct: 626 DDEVAWKILIDGLLKNG-----------LSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 174/301 (57%), Gaps = 6/301 (1%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TY  LI   C       A+ L +EM +        CKP+ VTYN +++G+CKEG
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG------CKPDVVTYNVLVNGMCKEG 65

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A +    M      P+V+T+  ++R  C    W +A++L  EM+ +G  P VVTF+
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LC+ G + +A  +LE M   G  PN+ +YN L+ G+C   K+D A +    M S 
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D+V+YNT++   CK+  V+ A+ L +++ SKG  P ++TYNT+  GL ++ + ++A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++L  EMR   +  D  TY++ I GL + G V EA++ F  +     + N  +YN ++ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305

Query: 508 L 508
           L
Sbjct: 306 L 306



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 176/348 (50%), Gaps = 6/348 (1%)

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
           +PD+ T++ILI   C    V     +L  +      P+ VT+  L+ G+C E R+ EA  
Sbjct: 13  YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
                  +  +P+V T+N ++  +C TG  + A  L  EM          C P+ VT+N 
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG------CSPSVVTFNI 126

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I+ LC++G + +A ++  KM      P+ ++Y  ++ GFC     + A +    M+ +G
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD+VT++ ++  LCK+GK+D A  LL  +  +G +P   TYNT+IDG     K D A 
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L   M   G   DV++Y++LI    +   VEEA+  + ++   G+KP   TYN++  GL
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +  Q +RA+     M          +Y   I+G+   G   EALEL 
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ IL             + L   + S G  PD+ T+++L+N  CK GR+      
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN +T   +++ +C+  R M+A  L T+     C P V T+N LIN LCR
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+++ E+M          C PN+++YN ++ G CKE  +D+A +    M     
Sbjct: 134 KGLLGRAIDILEKMPTHG------CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VTY +++   C     + A  L  ++  +G  P ++T++ ++D L K GK D+A  
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M  +G+ P+  TY++LI G     K++ A K F  +E  G   +  +YN+++   C
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC 307

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K +  + A+   + M+SKG KPT V+Y  L  G+      + AL+L +E+
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 174/356 (48%), Gaps = 15/356 (4%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            ++  C  SG G        +A+ + D M       P V ++N+L   + K    D  + 
Sbjct: 22  LIEATCAESGVG--------QAMKLLDEM-GSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
               + S G  P++ TH+I++   C  GR      +L  ++R   +P+ VTF  LI  LC
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  +  A  +  K     C P+  +YN L++G C+      A+   E M +        
Sbjct: 133 RKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG------ 186

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+ VTYNT++  LCK+G VD A EL  ++  +  +P ++TY +VI G       ++A 
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM  +G++PDV+T+S ++  L + GK+++A +    +   GV PN +TYN+++ G 
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           C   + D A      M S GC    VSY  LI         +EAL L +E+ S+G+
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 126/235 (53%)

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           E+  +  ++   PDV+TYT +I   C  +   +A +L  EM  +G +PDVVT++V+++ +
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK G++D+A + L  M   G  PN  T+N ++   C T +   A KL   M   GC   V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V++N LIN+ C+   +  A+ +  +M + G  P  ++YN L  G  +  +++RA++  + 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M       D  TYN  +  LCK G V  A+EL   +        +++YN +IDGL
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 236



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 46/93 (49%)

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + +    L K   P V+TY  L         V +A+KL DEM       D  TYN  ++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +CK G + EA++   ++     + N++++N ++
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIIL 93


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 221/451 (49%), Gaps = 31/451 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F  M R     P V ++N++   L K +  D    + +++ + G  PD  T++ 
Sbjct: 282 GKACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNC 340

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ +  +GR+     +  ++      PN V   S +  LC   R  EAA +F       
Sbjct: 341 MIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKG 400

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------------NGEFGVV---- 248
            +PD+ +Y TL++G    G     + LF  M +NG                + G+V    
Sbjct: 401 HKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAM 460

Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P+ VTY+T+I    + G +  A E F +M    I P+   Y S+I+GF
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGF 520

Query: 299 CYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           C      +AK L  EM+++G+ +PD+V F+ +++ LCK+G++  A  + +L+   G  P+
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPD 580

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             T+ +LIDGYCL  K+D A K+  +ME  G   D+V+Y+TL++ Y KN  + + L+L+ 
Sbjct: 581 VITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFR 640

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           EM  KG+KP  VTY  +  GLF   +   A K F EM  +        Y   + GLC++ 
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EA+ LF+ +     + +I   N +I+ +
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAM 731



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 231/475 (48%), Gaps = 57/475 (12%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT--------VLSLFKRLNSA 136
           ++ ++A  +FD + R   +P P  S N     LA+               L+LF R+   
Sbjct: 88  LSRDDAHHMFDELFR-QATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCRE 146

Query: 137 GLFP-----DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
              P      ++T+SIL++C C+  R   G V+ G ILR+    + +T ++L+K LC  +
Sbjct: 147 QAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYAN 206

Query: 192 RIMEAAALFTKHRV--FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           R  EA  +   HR+    C P+VF+Y+ ++ GLC    +  AL+LF+ MA   G     C
Sbjct: 207 RTEEAVNVLL-HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGG----AC 261

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN V YNT+I G  KEG   KA  LF +M  + + PDVVTY  +I   C A   ++A+ 
Sbjct: 262 SPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321

Query: 310 LFIEMMDQGVQPDVVTFSVI-----------------------------------MDELC 334
           +  +M   G QPD VT++ +                                   +  LC
Sbjct: 322 VLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLC 381

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K+G+  +A+ + + M  +G  P+  +Y TL+ GY           LF SM+SNG   D  
Sbjct: 382 KHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +N LI+ Y K   V++A+ +++EM  +G+ P VVTY+T+      + ++  A++ F++M
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDGL 508
               +  +T  Y++ I G C  G +++A EL    I       +IV +N +I+ L
Sbjct: 502 VARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 22/454 (4%)

Query: 47  TTTSKLKESLRL--TVKDRASL------KKFLKERCKSSGQGDINLITPNEALCIFDYML 98
            T  +LKE+ ++   +K R  +        FL   CK             EA  IFD M 
Sbjct: 346 ATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG--------RSKEAAEIFDSMT 397

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
                P  VS   +L G  A    +  ++ LF  + S G+  D    +ILI+ + K G V
Sbjct: 398 AKGHKPDIVSYCTLLHG-YASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++   + +   +P+ VT++++I       R+ +A   F +      +P+   Y+++
Sbjct: 457 DDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSI 516

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I G C  G  + A  L  EM N       + +P+ V +N++I+ LCK+G V  A ++F  
Sbjct: 517 IQGFCMHGGLVKAKELVSEMINKG-----IPRPDIVFFNSVINSLCKDGRVMDAHDIFDL 571

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           + D    PDV+T+TS+I G+C     ++A ++   M   GV+ D+VT+S ++D   KNG+
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           ++    L   M  +GV PNT TY  ++ G     +   ARK F  M  +G    V  Y  
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           ++   C+N   +EA+ L+ ++ +  +K ++   NT+   ++++ + E A +LF  +  + 
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +  +  TY   I  L K G V +A  +F ++  S
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 216/480 (45%), Gaps = 37/480 (7%)

Query: 65  SLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPP----PVSSFNILFGCLAKN 120
           SL  FL    +++         P  AL +F+ + R    P      V +++IL  C  + 
Sbjct: 111 SLNGFLTALARATSSSACITDGPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRA 170

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVT 179
           +  D  L LF  +   GL     T S L+ C C   R      V+L R+      PN  +
Sbjct: 171 RRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFS 230

Query: 180 FTSLIKGLCAESRIMEAAALFT--KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           ++ ++KGLC  S    A  LF        AC P+V  YNT+I+G  + G T  A +LF E
Sbjct: 231 YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE 290

Query: 238 MANGNGEFGVV---------CK--------------------PNTVTYNTIIDGLCKEGF 268
           M     +  VV         CK                    P+TVTYN +I G    G 
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A ++F KMK   + P++V   S +   C      EA  +F  M  +G +PD+V++  
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++      G       L   M   G+  +   +N LI  Y     +D A  +F  M+  G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DVV+Y+T+I+ + +   + +A+  +++M+++GI+P    Y+++  G      + +A 
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530

Query: 449 KLFDEMRRNHVA-ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +L  EM    +   D   +N+ I+ LCK G V++A ++F  + D     +++++  LIDG
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDG 590



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 185/374 (49%), Gaps = 7/374 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNIL    AK    D  + +F  +   G+ PD+ T+S +I+ F +MGR++       +++
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHT 228
                PN   + S+I+G C    +++A  L ++        PD+  +N++IN LC+ G  
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A ++F+ +    GE     +P+ +T+ ++IDG C  G +DKA ++   M+   +  D+
Sbjct: 563 MDAHDIFD-LVTDIGE-----RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY++++ G+      N+   LF EM  +GV+P+ VT+ +++  L + G+   A +    
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           MI  G       Y  ++ G C  +  D A  LF  + +      +   NT+IN   K + 
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  L++ + + G+ P   TY  + + L +   VE A  +F  M ++ +   +   N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 469 FIDGLCKSGFVLEA 482
            I  L + G + +A
Sbjct: 797 IIRMLLEKGEIAKA 810



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 194/440 (44%), Gaps = 44/440 (10%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           + P   ++N +    A          +F+++ S GL P+I   +  +   CK GR     
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 163 VVLGRILRSCFTPNAVTFTSLI---------------------KGLCAESRIM------- 194
            +   +      P+ V++ +L+                      G+ A+ R+        
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 195 -------EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFG 246
                  +A  +FT+ +     PDV TY+T+I+   R G    A+  F +M A G     
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG----- 505

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI-NPDVVTYTSVIRGFCYANDWN 305
              +PNT  Y++II G C  G + KAKEL  +M ++ I  PD+V + SVI   C      
Sbjct: 506 --IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +A  +F  + D G +PDV+TF+ ++D  C  GKMDKA ++L+ M   GV  +  TY+TL+
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DGY    +I+    LF  M+  G   + V+Y  ++    +      A   + EM+  G  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            TV  Y  +  GL   +  + A+ LF ++   +V       N  I+ + K     EA EL
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 486 FRAIRDSKYELNIVSYNCLI 505
           F  I  S    N  +Y  +I
Sbjct: 744 FATISASGLLPNESTYGVMI 763


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 219/428 (51%), Gaps = 14/428 (3%)

Query: 88  NEALCIFDYM----LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           +  L  +DY+    + M+ SP  +S FN++   L K    D  + +F+ +      PD Y
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLS-FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGY 223

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+  L++  CK  R+    ++L  +     +P+ V +  LI GLC +  +     L    
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNM 283

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            +  C P+  TYNTLI+GLC  G    A++L E M +        C PN VTY T+I+GL
Sbjct: 284 FLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGL 337

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K+        L + M++     +   Y+ +I G        EA  L+ +M ++G +P++
Sbjct: 338 VKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNI 397

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V +S ++D LC+ GK ++A  +L  MI  G  PN YTY++L+ G+  T   + A +++  
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  GC  +   Y+ LI+  C    V+EA+ ++S+ML+ GIKP  V Y+++  GL  I  
Sbjct: 458 MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGS 517

Query: 444 VERALKLFDEM---RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           ++ ALKL+ EM          D  TYN  +DGLC    V  A++L   + D   + ++++
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577

Query: 501 YNCLIDGL 508
            N  ++ L
Sbjct: 578 CNTFLNTL 585



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 238/490 (48%), Gaps = 17/490 (3%)

Query: 26  SSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLI 85
            SF       SS+ EN  +     S  K   R+ +++R  +++      ++ G+  +   
Sbjct: 71  GSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHL--- 127

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL----FPD 141
            P +A+ +F  M+        V SFN +   +     Y   L  +  + ++ +     P+
Sbjct: 128 -PEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPN 186

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
             + +++I   CK+G V     V   +      P+  T+ +L+ GLC E RI EA  L  
Sbjct: 187 GLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           + +   C P    YN LI+GLC+ G       L + M      F   C PN VTYNT+I 
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNM------FLKGCFPNEVTYNTLIH 300

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC +G +DKA  L  +M      P+ VTY ++I G        +  RL I M ++G + 
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRL 360

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +   +SV++  L K GK ++A  L + M  +G  PN   Y+ +IDG C   K + A+++ 
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEIL 420

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M S+GC+ +V +Y++L+  + K    EEA+ ++ EM   G       Y+ L  GL  +
Sbjct: 421 NGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGV 480

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI---RDSKYELNI 498
            +V+ A+ ++ +M    +  DT  Y++ I GLC  G +  AL+L+  +    + K + ++
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540

Query: 499 VSYNCLIDGL 508
           V+YN L+DGL
Sbjct: 541 VTYNILLDGL 550



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 202/412 (49%), Gaps = 31/412 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M     SP PV  +N+L   L K      V  L   +   G FP+  T++ 
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNT 297

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  G++     +L R++ S   PN VT+ +LI GL  + R M+ A L        
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERG 357

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +   Y+ LI+GL + G    A+ L+++MA         C+PN V Y+ +IDGLC+EG
Sbjct: 358 YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG------CRPNIVVYSAVIDGLCREG 411

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++AKE+   M      P+V TY+S+++GF       EA +++ EM + G   +   +S
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYS 471

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--- 384
           V++D LC  G++ +A  +   M+  G+ P+T  Y+++I G C    +D A KL+  M   
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT----------- 433
           E      DVV+YN L++  C  KDV  A+ L + ML +G  P V+T NT           
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDS 591

Query: 434 ----------LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
                     L   L +  +V  A K+ + M   ++A  T T+   +  +CK
Sbjct: 592 CEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICK 643



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 17/273 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  ++ +   L +    +    +   + S+G  P++YT+S L+  F K G       V
Sbjct: 395 PNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQV 454

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +  + N   ++ LI GLC   R+ EA  +++K      +PD   Y+++I GLC 
Sbjct: 455 WREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCG 514

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL L+ EM           +P+ VTYN ++DGLC +  V +A +L   M D   
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKS---QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGC 571

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PDV+T  + +      +D  E  R F+E +              +  L K  ++  A +
Sbjct: 572 DPDVITCNTFLNTLSEKSDSCEEGRSFLEEL--------------VARLLKRQRVSGACK 617

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           ++E+M+ + + P T T+  ++   C   KI+ A
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVPEICKPKKINAA 650


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 212/440 (48%), Gaps = 30/440 (6%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR     P V SFN +  CL K +  D  LSLF+ +      P+  T++I+I+  C  GR
Sbjct: 211 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGR 269

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   + +L  +  +   PN +T   ++  LC   ++ EA  +F       C PD  TY +
Sbjct: 270 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329

Query: 218 LINGLCRTGHTIVALNLFEEMAN-GNGEFGVV---------------------------- 248
           LI+GL + G    A  LFE+M + G+    VV                            
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG 389

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKP+    NT +D + K G V+K + +F  ++     PDV +Y+ +I G   A    E  
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +F  M  QG   D   ++ ++D  CK+GK+ KA  +LE M  + V P   TY  ++DG 
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
              D++D A  LF   +S G   +VV Y++LI+ + K   ++EA  +  EM+ KG+ P V
Sbjct: 510 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 569

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            T+N+L   L +  ++  AL  F  M+      +TYTY+  I+GLC+     +A   ++ 
Sbjct: 570 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQD 629

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           ++      N+V+Y  +I GL
Sbjct: 630 MQKQGLVPNVVTYTTMISGL 649



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 198/404 (49%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N+   C  K  + D     F  L + GL PD  +++ +I   CK GR+     +
Sbjct: 113 PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++      P A  + ++I G  +  R  +A  L  + R   C P V ++N+++  L +
Sbjct: 173 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL+LFE M           +PN+ TYN IID LC  G V++A  +  +M+  ++
Sbjct: 233 KRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 285

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+++T   ++   C A    EA ++F     +G  PD VT+  ++D L K G++D+A R
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M+  G N N   Y +LI  + +  + +   K+F  +   GC  D+   NT ++   
Sbjct: 346 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVF 405

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +VE+   ++ ++ S G  P V +Y+ L  GL +  Q      +F  M++   A D  
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  +DG CKSG V +A E+   +++   +  + +Y  ++DGL
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 197/402 (49%), Gaps = 7/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  F  L   LA+       L+L   +  + L PDI  +++ I+CF K G V        
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ V++TS+I  LC   R+ EA  LF +       P  + YNT+I G    G
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L E +          C P+ V++N+I+  L K+  VD+A  LF  MK ++  P
Sbjct: 200 RFEDAYKLLERLRERG------CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 252

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +  TY  +I   C      EA R+  EM    + P+++T ++++D LCK  K+++A ++ 
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E    RG NP+  TY +LIDG     ++D A +LF  M   G   + V Y +LI  +  +
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              E+   ++ E++ +G KP +   NT    +F+  +VE+   +F+++R      D  +Y
Sbjct: 373 GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 432

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  I GL K+G   E   +F A++   + L+  +YN ++DG 
Sbjct: 433 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGF 474



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 199/397 (50%), Gaps = 7/397 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  IF+   +   +P  V+  +++ G L K    D    LF+++  AG   +   ++ 
Sbjct: 306 EEAYKIFESASQRGCNPDCVTYCSLIDG-LGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  F   GR   G  V   ++R    P+     + +  +     + +   +F   R + 
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 424

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+ LI+GL + G      N+F  M      F +    +   YN ++DG CK G
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNAVVDGFCKSG 478

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V KA E+  +MK++ + P V TY +++ G    +  +EA  LF E   +G++ +VV +S
Sbjct: 479 KVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 538

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K G++D+A  +LE M+ +G+ PN YT+N+L+D     ++I+ A   F SM+  
Sbjct: 539 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 598

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  +  +Y+ LIN  C+ +   +A   + +M  +G+ P VVTY T+  GL ++  +  A
Sbjct: 599 KCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDA 658

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
             LF+  + N    D  ++N  I+G+  +   +EA +
Sbjct: 659 YSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 209/448 (46%), Gaps = 34/448 (7%)

Query: 92  CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           C F + L+     P   S+  +   L K         LF ++ +    P  Y ++ +I  
Sbjct: 135 CKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 194

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           +   GR    + +L R+      P+ V+F S++  L  + ++ EA +LF   +  A EP+
Sbjct: 195 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPN 253

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGN----------------------------- 242
             TYN +I+ LC  G    A  + +EM + +                             
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313

Query: 243 --GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
              + G  C P+ VTY ++IDGL K+G VD+A  LF KM D   N + V YTS+IR F  
Sbjct: 314 SASQRG--CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 371

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                +  ++F E++ +G +PD+   +  MD + K G+++K   + E +   G  P+  +
Sbjct: 372 HGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 431

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y+ LI G     +      +F +M+  G   D  +YN +++ +CK+  V +A  +  EM 
Sbjct: 432 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            K ++PTV TY  +  GL +I +++ A  LF+E +   +  +   Y++ IDG  K G + 
Sbjct: 492 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 551

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA  +   +       N+ ++N L+D L
Sbjct: 552 EAYLILEEMMKKGLTPNVYTWNSLLDAL 579



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 213/456 (46%), Gaps = 43/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F+ M +   + P  S++NI+   L      +    +   +  A LFP++ T +I
Sbjct: 237 DEALSLFEVMKK--DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 294

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           +++  CK  ++   + +     +    P+ VT+ SLI GL  + ++ EA  LF K     
Sbjct: 295 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 354

Query: 203 ------------------------HRVF------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                                   H+VF       C+PD+   NT ++ + + G      
Sbjct: 355 HNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 414

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +FE++ +    +G +  P+  +Y+ +I GL K G   +   +F  MK +    D   Y 
Sbjct: 415 MIFEDIRS----YGFL--PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 468

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           +V+ GFC +   ++A  +  EM ++ VQP V T+  I+D L K  ++D+A  L E    +
Sbjct: 469 AVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK 528

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+  N   Y++LIDG+    +ID A  +   M   G   +V ++N+L++   K +++ EA
Sbjct: 529 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 588

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L  +  M      P   TY+ L  GL  + +  +A   + +M++  +  +  TY   I G
Sbjct: 589 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 648

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K G + +A  LF   + +    +  S+N LI+G+
Sbjct: 649 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 684



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 156/334 (46%), Gaps = 8/334 (2%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PN      L   L    R+ +A       R     P    Y  LI  L        AL L
Sbjct: 9   PNQAC-ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             +M     E GV        + T++  L +EG V  A  L  ++K   + PD+V Y   
Sbjct: 68  LRQMQEVGYEVGVH------LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 121

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I  F  A + + A + F E+  QG++PD V+++ ++  LCK G++ +A  L   M     
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P  Y YNT+I GY    + + A KL   +   GC+  VVS+N+++    K + V+EALS
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 241

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ E++ K  +P   TYN +   L    +VE A ++ DEM    +  +  T N  +D LC
Sbjct: 242 LF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 300

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+  + EA ++F +        + V+Y  LIDGL
Sbjct: 301 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 206/401 (51%), Gaps = 9/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S NIL   L            F  ++S    PD+ T+  +++ +C  G + +   +L 
Sbjct: 255 VCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLD 311

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +       NA  +TS+I  LC + ++ +A  +     +     D   + T+I+G C  G
Sbjct: 312 EMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKG 371

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  LFEEM     + G+    + VT+  +I+GLC+ G + +A  +  +M D+ ++ 
Sbjct: 372 DLAAARRLFEEMQ----KRGLAA--DRVTHTALINGLCRAGELKEADRVLQEMVDKGLDV 425

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DVVTYT +I G+C   +  EA R+  EM+ + V P+VVT++ + D LCK G +  A+ LL
Sbjct: 426 DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELL 485

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G+  N YTYN+LI+G C    ++ A ++   ME+ G   DV +Y TLI+  CK+
Sbjct: 486 HEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKS 545

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            + + A ++  EML KGIKP++ TYN L  G     +VE   KL + M   +V  +  TY
Sbjct: 546 GEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTY 605

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N+ +   C    +    E+++ +   +   N  +YN LI G
Sbjct: 606 NSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 184/343 (53%), Gaps = 6/343 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF+ +   GL  D  TH+ LIN  C+ G +     VL  ++      + VT+T LI G C
Sbjct: 379 LFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC 438

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               ++EA  +  +       P+V TY  L +GLC+ G    A  L  EM N   E    
Sbjct: 439 KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL--- 495

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              N  TYN++I+GLCK G +++A  +  +M+      DV TYT++I   C + +++ A 
Sbjct: 496 ---NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  EM+D+G++P + T++V+M+  C +G+++   +LLE M+ + V PN  TYN+L+  Y
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C+   +    +++  M S     +  +YN LI  +CK ++++EAL  + EM+ KG++ T 
Sbjct: 613 CIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTA 672

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            +Y+ L   L +  +   A   FD+MR   + A+   Y+ ++D
Sbjct: 673 SSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 195/403 (48%), Gaps = 6/403 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SPP V ++  +          +  + L   + + GL  +   ++ +I   C  G+VS   
Sbjct: 283 SPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDAL 342

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            VL  +       +AV FT++I G C++  +  A  LF + +      D  T+  LINGL
Sbjct: 343 RVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGL 402

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A  + +EM +   +  VV      TY  +IDG CK G + +A  +  +M   
Sbjct: 403 CRAGELKEADRVLQEMVDKGLDVDVV------TYTVLIDGYCKRGNMVEAFRVHNEMVGR 456

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P+VVTYT++  G C   D   A  L  EM ++G++ +V T++ +++ LCK G +++A
Sbjct: 457 RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQA 516

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R++  M   G   + YTY TLID  C + + D A  +   M   G    + +YN L+N 
Sbjct: 517 MRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNG 576

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C +  VE    L   ML K ++P VVTYN+L         ++   +++  M    VA +
Sbjct: 577 FCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPN 636

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             TYN  I G CK+  + EAL   + + +    L   SY+ LI
Sbjct: 637 ENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 13/314 (4%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA ALF +      + +V ++N L+  L   G    A   F+EM++          P+ V
Sbjct: 242 EAIALFRE----LPDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---------PPDVV 288

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T++ G C  G ++ A +L  +M  + +  +   YTSVI   C     ++A R+  +M
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
              GV  D V F+ ++   C  G +  A RL E M  RG+  +  T+  LI+G C   ++
Sbjct: 349 TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGEL 408

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A ++   M   G   DVV+Y  LI+ YCK  ++ EA  +++EM+ + + P VVTY  L
Sbjct: 409 KEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTAL 468

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +   V  A +L  EM    +  + YTYN+ I+GLCK G + +A+ +   +  + +
Sbjct: 469 SDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH 528

Query: 495 ELNIVSYNCLIDGL 508
             ++ +Y  LID L
Sbjct: 529 RTDVYTYTTLIDTL 542


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 13/381 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKM 155
           +LR  P P  V+ +N +             L + + +    G+ P+ YT+  +I+ +CK+
Sbjct: 136 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 156 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDV 212
           GRV     V   +L +    P AV + +LI G C + ++    AL  + R+        V
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL--DTALLYRDRMVERGVAMTV 252

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN L++ L   G    A  L EEM  G G       P+  TYN +I+G CKEG V KA
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKA 306

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+F  M    +   VVTYT++I          E  +LF E + +G++PD+V ++ +++ 
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              +G +D+A  ++  M  + + P+  TYNTL+ G CL  ++D ARKL   M   G   D
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+YNTLI+ Y    DV++AL + +EM++KG  PT++TYN L  GL +  Q + A  +  
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 486

Query: 453 EMRRNHVAADTYTYNNFIDGL 473
           EM  N +  D  TY + I+GL
Sbjct: 487 EMVENGITPDDSTYISLIEGL 507



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 199/440 (45%), Gaps = 41/440 (9%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----------------------GL 138
           H    P S  N+L    A  + + T L L+ R+ S                        L
Sbjct: 42  HLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL 101

Query: 139 FPDIY---------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F D++         T +I++   C  G+ +        +LR    PNAVT+ ++I G C+
Sbjct: 102 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCS 157

Query: 190 ESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
             R+  A  +  + R      P+ +TY T+I+G C+ G    A+ +F+EM    GE    
Sbjct: 158 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGE---- 212

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            KP  V YN +I G C +G +D A     +M +  +   V TY  ++          EA 
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 272

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM  +G+ PDV T++++++  CK G + KA  + E M  RGV     TY  LI   
Sbjct: 273 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 332

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
               ++    KLF      G   D+V YN LIN +  + +++ A  +  EM  K I P  
Sbjct: 333 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 392

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTYNTL  GL  + +V+ A KL DEM    +  D  TYN  I G    G V +AL +   
Sbjct: 393 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 452

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + +  +   +++YN LI GL
Sbjct: 453 MMNKGFNPTLLTYNALIQGL 472



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 204/424 (48%), Gaps = 19/424 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M R+   P   ++FNI+   L         L L +++      P+  T++ +I
Sbjct: 98  AFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 152

Query: 150 NCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALF----TKHR 204
             FC  GRV     ++  +  R    PN  T+ ++I G C   R+ EA  +F    TK  
Sbjct: 153 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 212

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           V   +P+   YN LI G C  G    AL   + M     E GV       TYN ++  L 
Sbjct: 213 V---KPEAVMYNALIGGYCDQGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALF 263

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G   +A EL  +M  + + PDV TY  +I G C   +  +A  +F  M  +GV+  VV
Sbjct: 264 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 323

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++  L K G++ +  +L +  + RG+ P+   YN LI+ +  +  ID A ++   M
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E      D V+YNTL+   C    V+EA  L  EM  +GI+P +VTYNTL  G      V
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL++ +EM          TYN  I GLCK+G   +A  + + + ++    +  +Y  L
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503

Query: 505 IDGL 508
           I+GL
Sbjct: 504 IEGL 507



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 8/274 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+L   L  +        L + +   GL PD++T++ILIN  CK G V     +  
Sbjct: 252 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 311

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R       VT+T+LI  L  + ++ E   LF +       PD+  YN LIN    +G
Sbjct: 312 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 371

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  +  EM            P+ VTYNT++ GLC  G VD+A++L  +M +  I P
Sbjct: 372 NIDRAFEIMGEMEKKR------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 425

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY ++I G+    D  +A R+  EMM++G  P ++T++ ++  LCKNG+ D A  ++
Sbjct: 426 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 485

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDK--IDHAR 378
           + M+  G+ P+  TY +LI+G    D+  ID  R
Sbjct: 486 KEMVENGITPDDSTYISLIEGLTTEDERAIDDER 519


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 209/410 (50%), Gaps = 37/410 (9%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           +L     K K ++    L K       FP+   ++ +IN FCK G+V   F +L  +   
Sbjct: 81  VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
               + +  ++LI+GLC + RI EA   F K     C P+V TYNT++NGLC+      A
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEALEQF-KSMGEECSPNVITYNTVVNGLCKANRIDEA 199

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L LF++M     E    C+P+ ++Y+T+ID LCK   VDKA E F +M+     P+VVTY
Sbjct: 200 LELFDDMEK-RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY 258

Query: 292 TSVIRGFC----------------------------------YANDWNE-AKRLFIEMMD 316
           +S+I G C                                  + ND  E A + F  ++ 
Sbjct: 259 SSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 318

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G +P+VVT++V +  LCK G++D+A R+L  M+   V P+  TY+++IDG+C   ++D 
Sbjct: 319 SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 378

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  +F  M  + C+   V++ TL++ + ++K   EA  ++ +M++ G  P + TYN L  
Sbjct: 379 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 438

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +     VE AL+++ +M+R     D  TY   I  LC++  V EA E  
Sbjct: 439 CVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFL 488



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 184/404 (45%), Gaps = 47/404 (11%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           K    D    L   +   G+  D+  HS LI   C+ GR+         +   C +PN +
Sbjct: 123 KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC-SPNVI 181

Query: 179 TFTSLIKGLCAESRIMEAAALFTK-----HRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           T+ +++ GLC  +RI EA  LF            CEPDV +Y+T+I+ LC+      A  
Sbjct: 182 TYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 241

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN-------- 285
            F+ M        V C PN VTY+++IDGLCK     +  EL L MK++           
Sbjct: 242 YFKRMR------AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNA 295

Query: 286 ---------------------------PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
                                      P+VVTY   + G C A   +EA R+ +EM++  
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V PDV+T+S I+D  CK G+MDKA  +   M+     P+  T+ TL+ G+    K   A 
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           ++   M + G +  + +YN L++  C    VE AL +Y +M  K  +P   TY  L   L
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCL 475

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
               +V+ A +  D M  ++V  +    +  ++ LCK G V EA
Sbjct: 476 CRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 519



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 195/415 (46%), Gaps = 47/415 (11%)

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
           N  G   + YT ++L+N F K  R      +L   L     PN + +T++I G C   ++
Sbjct: 68  NKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQV 127

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            +A  L  + +    + DV  ++TLI GLCR G    AL  F+ M       G  C PN 
Sbjct: 128 DQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-------GEECSPNV 180

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMK-----DENINPDVVTYTSVIRGFCYANDWNEAK 308
           +TYNT+++GLCK   +D+A ELF  M+          PDV++Y++VI   C A   ++A 
Sbjct: 181 ITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 240

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELC---------------------------------- 334
             F  M   G  P+VVT+S ++D LC                                  
Sbjct: 241 EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHAL 300

Query: 335 -KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            KN + +KA +  E ++  G  PN  TYN  + G C   ++D A ++ + M  +    DV
Sbjct: 301 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV 360

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y+++I+ +CK   +++A  +++ M+     P  VT+ TL  G  E  +   A ++ ++
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M          TYN  +D +C +  V  ALE++  ++  K + +  +Y  LI  L
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCL 475



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 189/383 (49%), Gaps = 9/383 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  FN +   L KN   +     F+RL  +G  P++ T+++ ++  CK GRV   + +L 
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILL 349

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++ S  TP+ +T++S+I G C   R+ +A  +FT+  V  C P   T+ TL++G     
Sbjct: 350 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 409

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +  A  + E+M N     G +  P   TYN ++D +C    V+ A E++ KMK +   P
Sbjct: 410 KSREAFRVHEDMVNA----GFI--PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP 463

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D  TY  +I+  C A   +EAK     M    V P+      +++ LCK G++D+A  +L
Sbjct: 464 DCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVL 523

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + ++  G  P   T+  L++   L  K + A KL   + S G + D  +Y+  +   CK 
Sbjct: 524 DNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKA 580

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              +EA+ +  +M+ KG++P   TY  +   L  + +VE A+  F++M     A    TY
Sbjct: 581 GKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTY 640

Query: 467 NNFIDGLCKSGFVLEALELFRAI 489
              I   C +    EA  +F A+
Sbjct: 641 TLLIGEACSADMADEAFRIFEAM 663



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 196/406 (48%), Gaps = 13/406 (3%)

Query: 88  NEALCIFDYMLRM----HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           +EAL +FD M +     H   P V S++ +   L K +  D     FKR+ + G  P++ 
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T+S LI+  CK+ R S    +L  +    F  N + F +++  L       +A   F + 
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                +P+V TYN  ++GLC+ G    A  +  EM            P+ +TY++IIDG 
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK------VTPDVITYSSIIDGF 370

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G +DKA ++F +M      P  VT+ +++ GF       EA R+  +M++ G  P +
Sbjct: 371 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 430

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++V+MD +C    ++ A  +   M  +   P+  TY  LI   C   ++D A++    
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV 490

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ME++  + +    + L+   CK  +V+EA S+   ++  G +P   T+  L   L+   +
Sbjct: 491 MEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKK 550

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            E A KL   +R     AD  TY+  +  +CK+G   EA+E+   +
Sbjct: 551 WEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQM 593



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 105/268 (39%), Gaps = 38/268 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N+L  C+      ++ L ++ ++      PD  T++ LI C C+  RV      
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP-------------- 210
           L  +      PN     +L++ LC +  + EA ++        C+P              
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547

Query: 211 ------------------DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
                             D  TY+  +  +C+ G    A+ + E+M       GV  +P+
Sbjct: 548 RKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK----GV--RPD 601

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
             TY  ++  LC    V+ A   F KM      P +VTYT +I   C A+  +EA R+F 
Sbjct: 602 EGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFE 661

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            M+  G  P   T   +   L   G  D
Sbjct: 662 AMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 209/405 (51%), Gaps = 10/405 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N +   LA+++    V  LF++L +    P+++T +I+I+  CK G ++    
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  R+      P+ VTF SLI G      + E   L  + R   C+ DV TYN LIN  C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A   F  M       GV+   N VT++T +D  CKEG V +A +LF +M+   
Sbjct: 270 KFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  +  TYT +I G C A   ++A  L  EM+ QGV  +VVT++V++D LCK  K+ +A 
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L +M   GV  N   Y TLI G+ +    + A  L   M++ G   D+  Y  LI   
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    ++EA SL ++M   G++P  + Y T+    F+  +V  A+ +  ++  +    + 
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNV 503

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   IDGLCK+G + EA+  F  +RD   + N+ +Y  L+DGL
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 206/419 (49%), Gaps = 7/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M  M    P V +FN L     K    D V  L + +  +G   D+ T++ L
Sbjct: 206 EARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNAL 264

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCFCK GR+   +     + R     N VTF++ +   C E  + EA  LF + RV   
Sbjct: 265 INCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGM 324

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             + FTY  LI+G C+ G    A+ L +EM             N VTY  ++DGLCKE  
Sbjct: 325 ALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVVTYTVLVDGLCKERK 378

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A+++   M+   +  + + YT++I G     +  +A  L  EM ++G++ D+  +  
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC   K+D+A  LL  M   G+ PN   Y T++D    + K+  A  +   +  +G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +V++Y  LI+  CK   ++EA+S +++M   G+ P V  Y  L  GL +   +  A+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +LF+EM    ++ D   Y   +DG  K G + +A  L   + DS  +L++  Y C I G
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 182/379 (48%), Gaps = 6/379 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F+       K       + LF ++   G+  + +T++ LI+  CK GR+    V+L 
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++R     N VT+T L+ GLC E ++ EA  +           +   Y TLI+G     
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNK 412

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           ++  AL L  EM N   E  +        Y  +I GLC    +D+AK L  KM +  + P
Sbjct: 413 NSEKALGLLSEMKNKGLELDIS------LYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + + YT+++     +    EA  +  +++D G QP+V+T+  ++D LCK G +D+A    
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G++PN   Y  L+DG C    ++ A +LF  M   G   D V Y  L++ Y K 
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 586

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++ +A +L ++M+  G++  +  Y     G   ++ +  A ++F EM  + +A D   Y
Sbjct: 587 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVY 646

Query: 467 NNFIDGLCKSGFVLEALEL 485
           N  I    K G + EA+ L
Sbjct: 647 NCLISKYQKLGNLEEAISL 665



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 6/176 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K    D  +S F ++   GL P++  ++ L++  CK G ++    +
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++    + + V +T+L+ G   +  + +A AL  K      + D+F Y   I+G C 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
                 A  +F EM  G+G       P+   YN +I    K G +++A  L  +M+
Sbjct: 621 LNMMPEAREVFSEMI-GHG-----IAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 226/434 (52%), Gaps = 25/434 (5%)

Query: 89  EALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M      P PP+  ++++     ++  Y + L + + L++ G   D    ++
Sbjct: 134 DALAVLDEMTSRSCVPIPPM--YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNL 191

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR-------------IM 194
           +IN  C  G V  G  +L ++       + V++ +++KGLCA  R             + 
Sbjct: 192 VINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVH 251

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA +   +H    C PD+  Y T+I+G+C+ GH  VA  +   M +    +G+  KPN V
Sbjct: 252 EALSQMAQH---GCTPDIRMYATIIDGICKEGHHEVANEILSRMPS----YGL--KPNVV 302

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YNT++ G+C     +KA+EL  +M  +N   D VT+  ++  FC     +    L  +M
Sbjct: 303 CYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 362

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ G  PDV+T++ +++  CK G +D+A  LL+ M   G  PNT +Y  ++ G C T++ 
Sbjct: 363 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERW 422

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A +L   M   GC+ + V++NT+IN+ CK   VE+A+ L  +ML  G  P +++Y+T+
Sbjct: 423 VDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTV 482

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  + E AL+L + M    +  +  TY++    L + G + + +++F  I+D+  
Sbjct: 483 IDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATI 542

Query: 495 ELNIVSYNCLIDGL 508
             + V YN +I  L
Sbjct: 543 RSDAVLYNAVISSL 556



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 202/406 (49%), Gaps = 6/406 (1%)

Query: 102 PSPP-PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           P PP   + F ++ G   + +  D  L++   + S    P    + ++I   C+ G  S 
Sbjct: 111 PVPPNAYTYFPVVRGLCGRGRIADA-LAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              VL  +     T +      +I  +C +  + E   +  K  +F CE D+ +YN ++ 
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVV----CKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           GLC          L +EM   +     +    C P+   Y TIIDG+CKEG  + A E+ 
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M    + P+VV Y +V++G C A+ W +A+ L  EM  +    D VTF++++D  C+N
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +D+   LLE M+  G  P+  TY T+I+G+C    ID A  L  +M S GC  + +SY
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISY 409

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
             ++   C  +   +A  L S M+ +G  P  VT+NT+   L +   VE+A++L  +M  
Sbjct: 410 TIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           N    D  +Y+  IDGL K+G   EALEL   + +     N+++Y+
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYS 515



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 193/400 (48%), Gaps = 22/400 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSL----------FKRLNSAGLFPDIYTHSILINCFCKMG 156
           + S+N +   L   K +  V  L            ++   G  PDI  ++ +I+  CK G
Sbjct: 221 IVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEG 280

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
                  +L R+      PN V + +++KG+C+  R  +A  L T+     C  D  T+N
Sbjct: 281 HHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFN 340

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L++  C+ G     + L E+M     E G  C P+ +TY T+I+G CKEG +D+A  L 
Sbjct: 341 ILVDFFCQNGLVDRVIELLEQML----EHG--CMPDVITYTTVINGFCKEGLIDEAVMLL 394

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M      P+ ++YT V++G C    W +A+ L   M+ QG  P+ VTF+ I++ LCK 
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKK 454

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +++A  LL+ M+  G NP+  +Y+T+IDG     K + A +L   M + G   +V++Y
Sbjct: 455 GLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           +++     +   +++ + ++  +    I+   V YN +   L +  + + A+     M  
Sbjct: 515 SSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVS 574

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELF------RAIR 490
           N    +  TY   I GL   G + EA +L       RA+R
Sbjct: 575 NGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVR 614



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 180/398 (45%), Gaps = 44/398 (11%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRM--HPSPPPVSSFNILFGCLAK 119
           D  S    LK  C +   GD+  +  +E + + + + +M  H   P +  +  +   + K
Sbjct: 220 DIVSYNAVLKGLCAAKRWGDVEELM-DEMVKVHEALSQMAQHGCTPDIRMYATIIDGICK 278

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIY-----------------------------------T 144
             H++    +  R+ S GL P++                                    T
Sbjct: 279 EGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVT 338

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +IL++ FC+ G V     +L ++L     P+ +T+T++I G C E  I EA  L     
Sbjct: 339 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMP 398

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C+P+  +Y  ++ GLC T   + A  L   M          C PN VT+NTII+ LC
Sbjct: 399 SCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG------CLPNPVTFNTIINFLC 452

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K+G V++A EL  +M     NPD+++Y++VI G   A    EA  L   M+++G+ P+V+
Sbjct: 453 KKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVI 512

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+S +   L + G++DK  ++ + +    +  +   YN +I   C   + D A      M
Sbjct: 513 TYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYM 572

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            SNGCM +  +Y  LI        + EA  L SE+ S+
Sbjct: 573 VSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 148/338 (43%), Gaps = 22/338 (6%)

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            ++LI+ LC   R  +A          A    V  YN ++ G CR G    A  L     
Sbjct: 55  LSALIRSLCVAGRTADAVRALDAAGNAA---GVVDYNAMVAGYCRVGQVEAARRL----- 106

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                  V   PN  TY  ++ GLC  G +  A  +  +M   +  P    Y  +I   C
Sbjct: 107 ----AAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESAC 162

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            +  ++ A R+   +  +G   D    +++++ +C  G +D+   +L  +   G   +  
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIV 222

Query: 360 TYNTLIDGYC----------LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           +YN ++ G C          L D++    +    M  +GC  D+  Y T+I+  CK    
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHH 282

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E A  + S M S G+KP VV YNT+  G+    + E+A +L  EM + +   D  T+N  
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNIL 342

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +D  C++G V   +EL   + +     ++++Y  +I+G
Sbjct: 343 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 380



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 6/183 (3%)

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            S ++  LC  G+   A R L+     G       YN ++ GYC   +++ AR+L  ++ 
Sbjct: 55  LSALIRSLCVAGRTADAVRALDAA---GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 +  +Y  ++   C    + +AL++  EM S+   P    Y+ +           
Sbjct: 112 VP---PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL++ + +       DT   N  I+ +C  G V E LE+ R +     E +IVSYN ++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 506 DGL 508
            GL
Sbjct: 229 KGL 231


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 212/440 (48%), Gaps = 30/440 (6%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR     P V SFN +  CL K +  D  LSLF+ +      P+  T++I+I+  C  GR
Sbjct: 79  LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIIDMLCLGGR 137

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   + +L  +  +   PN +T   ++  LC   ++ EA  +F       C PD  TY +
Sbjct: 138 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 197

Query: 218 LINGLCRTGHTIVALNLFEEMAN-GNGEFGVV---------------------------- 248
           LI+GL + G    A  LFE+M + G+    VV                            
Sbjct: 198 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 257

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKP+    NT +D + K G V+K + +F  ++     PDV +Y+ +I G   A    E  
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 317

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +F  M  QG   D   ++ ++D  CK+GK+ KA  +LE M  + V P   TY  ++DG 
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
              D++D A  LF   +S G   +VV Y++LI+ + K   ++EA  +  EM+ KG+ P V
Sbjct: 378 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 437

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            T+N+L   L +  ++  AL  F  M+      +TYTY+  I+GLC+     +A   ++ 
Sbjct: 438 YTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQD 497

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           ++      N+V+Y  +I GL
Sbjct: 498 MQKQGLVPNVVTYTTMISGL 517



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 7/380 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
            F  L + GL PD  +++ +I   CK GR+     +  ++      P A  + ++I G  
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
           +  R  +A  L  + R   C P V ++N+++  L +      AL+LFE M          
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD------- 117

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            +PN+ TYN IID LC  G V++A  +  +M+  ++ P+++T   ++   C A    EA 
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           ++F     +G  PD VT+  ++D L K G++D+A RL E M+  G N N   Y +LI  +
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 237

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
            +  + +   K+F  +   GC  D+   NT ++   K  +VE+   ++ ++ S G  P V
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            +Y+ L  GL +  Q      +F  M++   A D   YN  +DG CKSG V +A E+   
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +++   +  + +Y  ++DGL
Sbjct: 358 MKEKCVQPTVATYGAIVDGL 377



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 199/396 (50%), Gaps = 7/396 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IF+   +   +P  V+  +++ G L K    D    LF+++  AG   +   ++ L
Sbjct: 175 EAYKIFESASQRGCNPDCVTYCSLIDG-LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  F   GR   G  +   ++R    P+     + +  +     + +   +F   R +  
Sbjct: 234 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV +Y+ LI+GL + G      N+F  M      F +    +   YN ++DG CK G 
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNAVVDGFCKSGK 347

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V KA E+  +MK++ + P V TY +++ G    +  +EA  LF E   +G++ +VV +S 
Sbjct: 348 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 407

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D   K G++D+A  +LE M+ +G+ PN YT+N+L+D     ++I+ A   F SM+   
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  +  +Y+ LIN  C+ +   +A   + +M  +G+ P VVTY T+  GL ++  +  A 
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            LF+  + N    D  ++N  I+G+  +   +EA +
Sbjct: 528 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 213/456 (46%), Gaps = 43/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F+ M +   + P  S++NI+   L      +    +   +  A LFP++ T +I
Sbjct: 105 DEALSLFEVMKK--DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 162

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           +++  CK  ++   + +     +    P+ VT+ SLI GL  + ++ EA  LF K     
Sbjct: 163 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAG 222

Query: 203 ------------------------HRVF------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                                   H++F       C+PD+   NT ++ + + G      
Sbjct: 223 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 282

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +FE++ +    +G +  P+  +Y+ +I GL K G   +   +F  MK +    D   Y 
Sbjct: 283 MIFEDIRS----YGFL--PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 336

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           +V+ GFC +   ++A  +  EM ++ VQP V T+  I+D L K  ++D+A  L E    +
Sbjct: 337 AVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK 396

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+  N   Y++LIDG+    +ID A  +   M   G   +V ++N+L++   K +++ EA
Sbjct: 397 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 456

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L  +  M      P   TY+ L  GL  + +  +A   + +M++  +  +  TY   I G
Sbjct: 457 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 516

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K G + +A  LF   + +    +  S+N LI+G+
Sbjct: 517 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 208/446 (46%), Gaps = 34/446 (7%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F + L+     P   S+  +   L K         LF ++ +    P  Y ++ +I  + 
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
             GR    + +L R+      P+ V+F S++  L  + ++ EA +LF   +  A EP+  
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSS 123

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGN------------------------------- 242
           TYN +I+ LC  G    A  + +EM + +                               
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
            + G  C P+ VTY ++IDGL K+G VD+A  LF KM D   N + V YTS+IR F    
Sbjct: 184 SQRG--CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              +  ++F E++ +G +PD+   +  MD + K G+++K   + E +   G  P+  +Y+
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G     +      +F +M+  G   D  +YN +++ +CK+  V +A  +  EM  K
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            ++PTV TY  +  GL +I +++ A  LF+E +   +  +   Y++ IDG  K G + EA
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             +   +       N+ ++N L+D L
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDAL 447



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A + F E+  QG++PD V+++ ++  LCK G++ +A  L   M      P  Y YNT+I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GY    + + A KL   +   GC+  VVS+N+++    K + V+EALSL+ E++ K  +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              TYN +   L    +VE A ++ DEM    +  +  T N  +D LCK+  + EA ++F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
            +        + V+Y  LIDGL
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGL 202



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 117/234 (50%), Gaps = 1/234 (0%)

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A + F ++K + + PD V+YTS+I   C A    EA+ LF +M  +   P    ++ ++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
                G+ + A +LLE +  RG  P+  ++N+++       K+D A  LF  M+ +    
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           +  +YN +I+  C    VEEA  +  EM    + P ++T N +   L +  ++E A K+F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +   +     D  TY + IDGL K G V EA  LF  + D+ +  N V Y  LI
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 234


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 213/480 (44%), Gaps = 65/480 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M   +   P V ++ ++   L +    D    +   L  +G+ P + T+++L++  
Sbjct: 202 VFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDAL 261

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ GRV   F + GR++     P+ VTF  LI GL    R  E  A+  +   F   P+ 
Sbjct: 262 CRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNE 321

Query: 213 FTYNTLINGLCRTGH------------------TIVALNL-----------------FEE 237
             YN LI   CR GH                  T+V  NL                  +E
Sbjct: 322 VIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381

Query: 238 MA-------------------NGNGEFGVVC-----------KPNTVTYNTIIDGLCKEG 267
           M                     G G   VV            KPN       I  LCK G
Sbjct: 382 MLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A E++  +  + +  ++ T  ++I G C  N+  EA ++   M+D GV+ D +T++
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++   CK  KM++A +L + MI RG  P+ +T+NT +  YC   K++    L   M+S 
Sbjct: 502 IMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE 561

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+V+Y T+I+ YCK KDV +A     E++  G++P  V YN L  G      +  A
Sbjct: 562 GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDA 621

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + + D M+ N +     TYN+ +  +C +G V EA E+F        EL ++ Y  +I G
Sbjct: 622 IGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQG 681



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 199/459 (43%), Gaps = 60/459 (13%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           ITPNE +                  +N L G   +  H    L LF  + S G+   + T
Sbjct: 317 ITPNEVI------------------YNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVT 358

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFT------------------------------ 174
           ++++    CK G + H   +L  +L +  T                              
Sbjct: 359 YNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREM 418

Query: 175 ------PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN    T+ I+ LC   +  EAA ++          ++ T N LI+GLC+  + 
Sbjct: 419 VARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNM 478

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  + + M +   EF      + +TYN +I   CK   +++A +L   M      PD+
Sbjct: 479 KEATKVLKAMVDSGVEF------DRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDL 532

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            T+ + +R +C      +   L  +M  +G++PD+VT+  I+D  CK   + KA++ L  
Sbjct: 533 FTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIE 592

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           +I  G+ PN   YN LI GY     I  A  +  +M+ NG     ++YN+L+ W C    
Sbjct: 593 LIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGL 652

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           VEEA  ++++ + K I+  V+ Y  +  G  +I +++ A+  F EM    +  +  TY  
Sbjct: 653 VEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTT 712

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   CK G   EA +LF  +  S    + VSYN LI G
Sbjct: 713 LMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISG 751



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 172/356 (48%), Gaps = 14/356 (3%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG----FVVLGRILRSCFTPNAVT 179
           D VL L + + +  L P+    +  I   CK G+        F+VLG+ L      N  T
Sbjct: 409 DVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL----GVNIAT 464

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
             +LI GLC  + + EA  +         E D  TYN +I   C+      A+ L ++M 
Sbjct: 465 SNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMI 524

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                     KP+  T+NT +   C  G V+    L  +MK E + PD+VTY ++I G+C
Sbjct: 525 KRG------FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A D ++A +  IE++  G++P+ V ++ ++    +NG +  A  +L+ M   G+ P   
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TYN+L+   C    ++ A+++F           V+ Y  +I  +CK   ++EA+  + EM
Sbjct: 639 TYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             + I+P  +TY TL     +    E A KLFDEM  + +  DT +YN  I G C+
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCE 754



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 7/336 (2%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           + KH +     F  L   GL  +I T + LI+  C+   +     VL  ++ S    + +
Sbjct: 440 RGKHEEAAEIWFLVLGK-GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRI 498

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+  +I+  C  S++ EA  L         +PD+FT+NT +   C  G     L+L ++M
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            +         KP+ VTY TIIDG CK   V KA +  +++    + P+ V Y ++I G+
Sbjct: 559 KSEG------LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGY 612

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
                 ++A  +   M   G+QP  +T++ +M  +C  G +++A  +    I + +    
Sbjct: 613 GRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGV 672

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             Y  +I G+C   KID A   F  M       + ++Y TL+  YCK  + EEA  L+ E
Sbjct: 673 IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDE 732

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           M+S GI P  V+YNTL  G  E+  +++ ++   EM
Sbjct: 733 MVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 8/316 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +++ N L   L +  +      + K +  +G+  D  T++I+I   CK  ++     +  
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +++  F P+  TF + ++  C   ++ +   L  + +    +PD+ TY T+I+G C+  
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581

Query: 227 HTIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
               A   L E + NG        +PN V YN +I G  + G +  A  +   MK   I 
Sbjct: 582 DVHKANKYLIELIKNG-------LRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQ 634

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P  +TY S++   C+A    EAK +F + + + ++  V+ +++I+   CK GK+D+A   
Sbjct: 635 PTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMY 694

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + M +R + PN  TY TL+  YC     + A KLF  M S+G + D VSYNTLI+  C+
Sbjct: 695 FKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCE 754

Query: 406 NKDVEEALSLYSEMLS 421
              +++ +   +EM S
Sbjct: 755 VDSLDKIVESPAEMSS 770



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 145/295 (49%), Gaps = 37/295 (12%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN-INPDVVTYTSVIRGFCYANDWNEAKR 309
           P+  T N +++ L   G +D A+++F +M+D N + PDV TYT +I+  C A + + A  
Sbjct: 178 PSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFV 237

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  E+   G+QP VVT++V+MD LC++G++++A +L   M+   + P+  T+  LI+G  
Sbjct: 238 MLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLA 297

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +      +   ME  G   + V YN LI W+C+     EAL L+ EM+SKGIK TVV
Sbjct: 298 RGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVV 357

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF-------------------- 469
           TYN +   L +  ++E A ++ DEM    +      +N+                     
Sbjct: 358 TYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIRE 417

Query: 470 ----------------IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                           I  LCK G   EA E++  +      +NI + N LI GL
Sbjct: 418 MVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGL 472


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 223/437 (51%), Gaps = 43/437 (9%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            +F +L   L +   +  V+ LF  L S G+     T+ ++++  C  G  +    ++ R
Sbjct: 20  QAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-R 78

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            L   +TP    +  +I GLC  SR+M+A  +  K    +  P+VFTY  L+NGLCR+  
Sbjct: 79  ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           T +A  +F+EM   NG     CKPN +TY T+I  L + G +D+A  + ++ +   +  D
Sbjct: 139 TKLAREVFQEMKR-NG-----CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI------------------ 329
           V+T T+++ G C A+  ++A +   EM   GV+P+ VT+S +                  
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 330 ------------------MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
                             +D LCK G +D+A + +E +   GV P+  TY+ LI+ +   
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            + D + +L   M  NG   DVV+Y+TLIN  CK +  ++A  L   M + G  P VVTY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N++  GL +  +++   ++++ M ++  + D  TY+  ++GL K+G +  A++LF  I+ 
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 492 SKYELNIVSYNCLIDGL 508
           S+   +  +Y+ +I  L
Sbjct: 433 SREGPDAAAYSMVITSL 449



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 182/386 (47%), Gaps = 42/386 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N +   L +         + +++    + P+++T++IL+N  C+  +      V
Sbjct: 86  PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R+   PN +T+ +LI+ L     I EA  +  + R      DV T  T++ GLC+
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII------------------------ 260
                 AL   EEM     + GV  +PN VTY+ ++                        
Sbjct: 206 ASRLDDALKFMEEMR----QMGV--RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKG 259

Query: 261 ------------DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
                       D LCK G++D+A++   +++   + PDVVTY+ +I  F  A  ++ + 
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASL 319

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M   GV+PDVVT+S +++ LCK  K   A RLLELM   G  PN  TYN+++DG 
Sbjct: 320 ELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGL 379

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C + K+D   +++  M  + C  DVV+Y+ ++N   K   ++ A+ L+  + S    P  
Sbjct: 380 CKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDA 439

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEM 454
             Y+ +   L    ++E A  ++  M
Sbjct: 440 AAYSMVITSLCRAGKLEEACGMYHGM 465



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 141/329 (42%), Gaps = 43/329 (13%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M R    P P++ +  L   L++    D  L +     S  L  D+ T + ++   
Sbjct: 145 VFQEMKRNGCKPNPIT-YGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGL 203

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG-------------------------- 186
           CK  R+      +  + +    PN VT+++L+ G                          
Sbjct: 204 CKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263

Query: 187 ----------LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
                     LC    +  A     + R     PDV TY+ LIN   R G    +L L E
Sbjct: 264 AAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLE 323

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           +M   NG      KP+ VTY+T+I+ LCKE     A  L   M+     P+VVTY SV+ 
Sbjct: 324 DMRR-NG-----VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMD 377

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C +   +E  R++  M+     PDVVT+S+IM+ L K G +D A +L EL+      P
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +   Y+ +I   C   K++ A  ++  ME
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 16/240 (6%)

Query: 89  EALCIFDYM---------LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           +ALC   Y+         LR     P V ++++L    A+   +D  L L + +   G+ 
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+ T+S LIN  CK  +    F +L  +  +   PN VT+ S++ GLC   ++ E   +
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           +       C PDV TY+ ++NGL + G    A+ LFE + +          P+   Y+ +
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE------GPDAAAYSMV 445

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVV-TYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           I  LC+ G +++A  ++  M+      ++      ++   C A   + A+R+     ++G
Sbjct: 446 ITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERG 505



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 3/237 (1%)

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           AK L   + +  +  D   +T +       + ++E  RLF  +  +GV     T+ +++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 332 ELCKNGKMDKASRLLELMIWRGV-NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
            LC  G  ++A  L+  +   GV  P  + YN +I G C   ++  A K+   M     +
Sbjct: 63  GLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V +Y  L+N  C++   + A  ++ EM   G KP  +TY TL   L    +++ AL++
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             E R   +  D  T    + GLCK+  + +AL+    +R      N V+Y+ L+ G
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG 237



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 1/202 (0%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK L   +++ GV+ D   F+++  +L +  K  +  RL  L+  RGV     TY  ++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C     + A +L   + S      +  YN +I   C+   V +A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVREL-SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V TY  L  GL   ++ + A ++F EM+RN    +  TY   I  L ++G + EAL + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
              R  +   ++++   ++ GL
Sbjct: 182 IEQRSLELPTDVITCTTIVGGL 203


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 209/405 (51%), Gaps = 10/405 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N +   LA+++    V  LF++L +    P+++T +I+I+  CK G ++    
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  R+      P+ VTF SLI G      + E   L  + R   C+ DV TYN LIN  C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A   F  M       GV+   N VT++T +D  CKEG V +A +LF +M+   
Sbjct: 270 KFGRMETAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  +  TYT +I G C A   ++A  L  EM+ QGV  +VVT++V++D LCK  K+ +A 
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L +M   GV  N   Y TLI G+ +    + A  L   M++ G   D+  Y  LI   
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    ++EA SL ++M   G++P  + Y T+    F+  +V  A+ +  ++  +    + 
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNV 503

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   IDGLCK+G + EA+  F  +RD   + N+ +Y  L+DGL
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 206/419 (49%), Gaps = 7/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M  M    P V +FN L     K    D V  L + +  +G   D+ T++ L
Sbjct: 206 EARSLFSRMKEM-GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNAL 264

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCFCK GR+   +     + R     N VTF++ +   C E  + EA  LF + RV   
Sbjct: 265 INCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGM 324

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             + FTY  LI+G C+ G    A+ L +EM             N VTY  ++DGLCKE  
Sbjct: 325 ALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVVTYTVLVDGLCKERK 378

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A+++   M+   +  + + YT++I G     +  +A  L  EM ++G++ D+  +  
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC   K+D+A  LL  M   G+ PN   Y T++D    + K+  A  +   +  +G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +V++Y  LI+  CK   ++EA+S +++M   G+ P V  Y  L  GL +   +  A+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +LF+EM    ++ D   Y   +DG  K G + +A  L   + DS  +L++  Y C I G
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 182/379 (48%), Gaps = 6/379 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F+       K       + LF ++   G+  + +T++ LI+  CK GR+    V+L 
Sbjct: 293 VVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLD 352

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++R     N VT+T L+ GLC E ++ EA  +           +   Y TLI+G     
Sbjct: 353 EMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNK 412

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           ++  AL L  EM N   E  +        Y  +I GLC    +D+AK L  KM +  + P
Sbjct: 413 NSEKALGLLSEMKNKGLELDIS------LYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + + YT+++     +    EA  +  +++D G QP+V+T+  ++D LCK G +D+A    
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G++PN   Y  L+DG C    ++ A +LF  M   G   D V Y  L++ Y K 
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 586

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++ +A +L ++M+  G++  +  Y     G   ++ +  A ++F EM  + +A D   Y
Sbjct: 587 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVY 646

Query: 467 NNFIDGLCKSGFVLEALEL 485
           N  I    K G + EA+ L
Sbjct: 647 NCLISKYQKLGNLEEAISL 665



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 6/176 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K    D  +S F ++   GL P++  ++ L++  CK G ++    +
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++    + + V +T+L+ G   +  + +A AL  K      + D+F Y   I+G C 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
                 A  +F EM  G+G       P+   YN +I    K G +++A  L  +M+
Sbjct: 621 LNMMPEAREVFSEMI-GHG-----IAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 7/382 (1%)

Query: 128  SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
            ++F  +++ G++PD  T+  +I  +C+ G V      +  ++   F  +  T T +I   
Sbjct: 817  NVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAF 876

Query: 188  CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
            C +S +  A   F K       P++  Y+++I+GLC+ G    A  L EEM   NG    
Sbjct: 877  CEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK-NG---- 931

Query: 248  VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNE 306
              KPN  T+ ++I GLCK+G+ ++A  LFLK+ + +N  P+V TYT++I G+C     + 
Sbjct: 932  -WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 990

Query: 307  AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
            A+ LF  M +QG+ P+  T++ ++D  CK G   KA  L+ELM   G  PNT TYN+++D
Sbjct: 991  AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 1050

Query: 367  GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            G C   + + A KL  +   N    D V+Y  LI+  CK  D+ +AL   ++M   G +P
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110

Query: 427  TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             +  Y TL       + ++ + KLFDE+ +  +A    TY + I G C+   V  A++ F
Sbjct: 1111 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 1170

Query: 487  RAIRDSKYELNIVSYNCLIDGL 508
            + + D     + +SY  LI GL
Sbjct: 1171 QKMSDHGCAPDSISYGALISGL 1192



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 201/414 (48%), Gaps = 11/414 (2%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            N A+  F  + +M  SP  ++  +++ G L K         L + +   G  P++YTH+ 
Sbjct: 883  NRAVWFFHKVTKMGLSPNLINYSSMISG-LCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941

Query: 148  LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  CK G     F +  +++RS  + PN  T+T++I G C E ++  A  LF + +  
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               P+  TY TLI+G C+ G+   A  L E M+N  G F     PNT TYN+I+DGLCK 
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN-EGFF-----PNTCTYNSIVDGLCKR 1055

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            G  ++A +L        I  D VTYT +I   C   D N+A     +M   G QPD+  +
Sbjct: 1056 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 1115

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            + ++   C+   M  + +L + +I  G+ P   TY ++I GYC   K+  A K F  M  
Sbjct: 1116 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD 1175

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            +GC  D +SY  LI+  CK   ++EA  LY  M+ KG+ P  VT  TL     +      
Sbjct: 1176 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 1235

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
            A+ + + + +       +T    I  LC    V  A   F  + D +  ++ V+
Sbjct: 1236 AMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKEVNVDRVT 1286



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 184/355 (51%), Gaps = 5/355 (1%)

Query: 137  GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
            G   D  T +++I  FC+   V+       ++ +   +PN + ++S+I GLC    + +A
Sbjct: 861  GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 920

Query: 197  AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
              L  +      +P+V+T+ +LI+GLC+ G T  A  LF ++   +       KPN  TY
Sbjct: 921  FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY-----KPNVHTY 975

Query: 257  NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
              +I G CKE  + +A+ LF +MK++ + P+  TYT++I G C A ++++A  L   M +
Sbjct: 976  TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035

Query: 317  QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            +G  P+  T++ I+D LCK G+ ++A +LL       +  +  TY  LI   C    ++ 
Sbjct: 1036 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 1095

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            A      M   G   D+  Y TLI  +C+   ++++  L+ E++  G+ PT  TY ++  
Sbjct: 1096 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 1155

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
            G     +V  A+K F +M  +  A D+ +Y   I GLCK   + EA +L+  + D
Sbjct: 1156 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMID 1210



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 1/257 (0%)

Query: 253  TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            T   N II    +   V+ A  +F +M    + PD  TY  +I G+C   +  EA R   
Sbjct: 796  TRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWIC 855

Query: 313  EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            EMM++G   D  T ++I+   C+   +++A      +   G++PN   Y+++I G C   
Sbjct: 856  EMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG 915

Query: 373  KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTY 431
             +  A +L   M  NG   +V ++ +LI+  CK    E A  L+ +++ S   KP V TY
Sbjct: 916  SVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTY 975

Query: 432  NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
              +  G  +  ++ RA  LF+ M+   +  +T TY   IDG CK+G   +A EL   + +
Sbjct: 976  TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 1035

Query: 492  SKYELNIVSYNCLIDGL 508
              +  N  +YN ++DGL
Sbjct: 1036 EGFFPNTCTYNSIVDGL 1052



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 1/211 (0%)

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           F       EA  + ++M +QG+       + I+    +   ++ A  + + M  RGV P+
Sbjct: 771 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           + TY  +I GYC    +  A +    M   G + D  +   +I  +C+   V  A+  + 
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFH 890

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           ++   G+ P ++ Y+++  GL +   V++A +L +EM +N    + YT+ + I GLCK G
Sbjct: 891 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 478 FVLEALELF-RAIRDSKYELNIVSYNCLIDG 507
           +   A  LF + IR   Y+ N+ +Y  +I G
Sbjct: 951 WTERAFRLFLKLIRSDNYKPNVHTYTAMISG 981



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 57/136 (41%)

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K+  A  + + M + G +      N +I    + + VE A +++ EM ++G+ P   TY 
Sbjct: 776 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 835

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            + +G      V  A +   EM       D  T    I   C+   V  A+  F  +   
Sbjct: 836 YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 895

Query: 493 KYELNIVSYNCLIDGL 508
               N+++Y+ +I GL
Sbjct: 896 GLSPNLINYSSMISGL 911


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 206/393 (52%), Gaps = 10/393 (2%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           + +   ++  L LF R N   L     T+++LI  FC    +   F +L  +       N
Sbjct: 1   MVRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLF 235
             T + +++GLC   R+ +A   F      A  +PDV +Y TLINGLC+ G    A +LF
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            +M    G     C+PN  TYN ++DGLCK+  +D A+ +  + +  +  PDVVTY +++
Sbjct: 120 RKMVAAGG-----CRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLM 174

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
                    +EA   F +M ++G  P +V+F+ I+  LC+  ++  A  +   MI R  +
Sbjct: 175 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 234

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN  TY+ +IDG C +D++D A++L   M S GC  D+V+Y  L+  +     ++ AL L
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 294

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
              M+S+G  P VVTY  +   L ++ +V+ A ++F E+  N  + +  TY+  I G C+
Sbjct: 295 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 354

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  V E     + +R+     N+V+YN +I GL
Sbjct: 355 ASRVDEG---GKVMREMACRPNVVTYNTMIWGL 384



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 214/423 (50%), Gaps = 21/423 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           N+AL +F    R +P   P SS  +N+L          D   SL + ++  G+  +  T 
Sbjct: 8   NQALQLF----RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTT 63

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFT-PNAVTFTSLIKGLCAESRIMEAAALFTKH- 203
           SI++   C+ GRV+         L      P+ V++T+LI GLC   R+  A  LF K  
Sbjct: 64  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 123

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C P+ FTYN L++GLC+      A  +  E    +        P+ VTYNT++  L
Sbjct: 124 AAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRD------FAPDVVTYNTLMAAL 177

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            + G VD+A   F +M +E   P +V++ ++I G C A    +A  +F EM+D+   P++
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT+SV++D LCK+ ++D+A +LL+ M+  G  P+   Y  L+ G+    ++D A  L   
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M S GC+ DVV+Y  +I+  CK   V++A  ++ E+++    P VVTY+ L  G     +
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357

Query: 444 VERALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
           V+   K+  EM  R N V     TYN  I GL       EA  +FR + +  +  +  +Y
Sbjct: 358 VDEGGKVMREMACRPNVV-----TYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412

Query: 502 NCL 504
             L
Sbjct: 413 RGL 415



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 190/367 (51%), Gaps = 22/367 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSI 147
           +AL  FD  L +  + P V S+  L   L K    D    LF+++ +AG   P+ +T++ 
Sbjct: 78  QALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK  R+     V+    +  F P+ VT+ +L+  L    R+ EA A FT+     
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + ++N +I GLCR      AL +F EM + +        PN VTY+ +IDGLCK  
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLVTYSVVIDGLCKSD 251

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A++L  +M  E   PD+V YT ++ GF  A   + A  L   M+ QG  PDVVT++
Sbjct: 252 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 311

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D+LCK G++D A  +   ++    +PN  TY+ LI GYC   ++D   K+   M   
Sbjct: 312 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREM 368

Query: 388 GCMHDVVSYNTLINWYCKNKDV-EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            C  +VV+YNT+I W     D  EEA  ++ EM   G  P   TY  L          +R
Sbjct: 369 ACRPNVVTYNTMI-WGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL----------KR 417

Query: 447 ALKLFDE 453
           AL++ D+
Sbjct: 418 ALRMIDQ 424



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 9/272 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L +    D  L+ F ++   G  P + + + +I   C+  R++    V
Sbjct: 165 PDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEV 224

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++   F PN VT++ +I GLC   ++ EA  L  +     C PD+  Y  L+ G   
Sbjct: 225 FNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 284

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL L   M +        C P+ VTY  +ID LCK G VD A E+F ++     
Sbjct: 285 AGRLDSALGLLRRMVSQG------CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 338

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+VVTY+++I G+C A+  +E  ++  EM     +P+VVT++ ++  L    + ++A  
Sbjct: 339 SPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYG 395

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +   M   G  P+  TY  L     + D+  H
Sbjct: 396 MFREMSECGFVPDARTYRGLKRALRMIDQPPH 427


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/409 (32%), Positives = 210/409 (51%), Gaps = 5/409 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN--CFCKMGRVSH 160
           S   ++ FN    CL K   + T ++LF + N    F      ++ I   CF  +G VS 
Sbjct: 32  SHSSLAHFNKHLTCLMKTNQHSTAIALFNQ-NEYNNFITPCIITLTIIITCFFHLGHVSF 90

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            F + G+IL+  +  + V   +++KGLC    +++A     +        +  +Y  LIN
Sbjct: 91  SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150

Query: 221 GLCRTGHTIVALNLFEEMANGNGEF--GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           GLC  G    A+NL   +     +   G   K N V Y+ +ID LC+ GFVD+  E + +
Sbjct: 151 GLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNE 210

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M    + P+  TY S+IRG C    + E   L  EM+ +G+   V  F+V++D LCKNG 
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + +A  + + M+ RG  PN  T   L+ GYCL   +D AR+LF ++   G   DV +YN 
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
            I+ YCK   V +A+ ++ EM  +G+ P +VTYN+L   L +  +V  A ++   M R+ 
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  D  T    +DGLCKS  + +A+ LF  + +S    ++ SY  LI G
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 210/407 (51%), Gaps = 14/407 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSA------GLF--PDIYTHSILINCFCKMGRVSH 160
           S+ IL   L +N   +  ++L + +         G F   ++  +SI+I+C C+ G V  
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           GF     ++ +   PN  T+ SLI+GLC   + +E   L  +      +  V+ +  LI+
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G  + A  +F+EM N   E      PN VT   ++ G C +G VD A+ELF  + 
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYE------PNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +     DV TY   I G+C      +A R+F EM  +GV P++VT++ ++D LCK G++ 
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A  +++ M   G+ P+  T   L+DG C + ++D A  LF  +  +G   DV SY  LI
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  C ++ + EA++L  +M  K + P +VTY+ L  GL    ++  A +L +EM      
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            DT TY+  +D L K   + EA+ LF  +     E +++ Y  +IDG
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDG 544



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 206/402 (51%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  ++I+  CL +N   D     +  +   G+ P+ +T+  LI   C +G+   GF ++ 
Sbjct: 185 VVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVD 244

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++R     +   FT LI GLC    ++EA  +F +      EP++ T   L+ G C  G
Sbjct: 245 EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKG 304

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +  +A  LF+ +    GE+G   K +  TYN  I G CK G V  A  +F +M  E + P
Sbjct: 305 NVDMARELFDAI----GEWGF--KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP 358

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++VTY S+I   C A + + A  +   M   G+ PD+VT  +++D LCK+ ++D+A  L 
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             ++  G+ P+ ++Y  LI G C + ++  A  L   M     +  +V+Y+ LI+  C++
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +  A  L +EM  KG  P  +TY+ L   L++   ++ A+ LF++M +  +  D   Y
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 538

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              IDG CKS  + EA+ LFR +       +IV+Y  L + +
Sbjct: 539 TIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAV 580



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 157/314 (50%), Gaps = 9/314 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           EA  +FD M+     P  V+   ++ G CL  N   D    LF  +   G   D++T+++
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN--VDMARELFDAIGEWGFKRDVWTYNV 330

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I+ +CK+GRV     V   + R    PN VT+ SLI  LC    +  A  +        
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ T   L++GLC++     A+ LF ++     E G+   P+  +Y  +I G C   
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLV----ESGLT--PDVWSYTILIHGCCTSR 444

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A  L   M  +N+ P +VTY+ +I G C +   + A RL  EM  +G  PD +T+S
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYS 504

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D L K   +D+A  L   MI RG+ P+   Y  +IDGYC +++ID A  LF  M   
Sbjct: 505 ILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMK 564

Query: 388 GCMHDVVSYNTLIN 401
             + D+V+Y  L N
Sbjct: 565 NLVPDIVTYTILFN 578



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 143/268 (53%), Gaps = 9/268 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +FD M R     P + ++N L  CL K         + K ++ +GL PDI T  IL
Sbjct: 343 DAVRVFDEMCR-EGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCIL 401

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK  R+    ++  +++ S  TP+  ++T LI G C   R+ EA  L     +   
Sbjct: 402 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL 461

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P + TY+ LI+GLCR+G    A  L  EM +  G       P+T+TY+ ++D L K+  
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEM-HVKGPL-----PDTITYSILLDALWKKQH 515

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A  LF +M    + PDV+ YT +I G+C +   +EA  LF EM  + + PD+VT+++
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTI 575

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNP 356
           + + + K+G      + + ++  R +NP
Sbjct: 576 LFNAVFKSGSNSYEWKFVNVI--RDINP 601



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
            F +  V  +  +F ++ +     DT   N  + GLC +G VL+ALE    I ++ + LN
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 498 IVSYNCLIDGL 508
            VSY  LI+GL
Sbjct: 142 EVSYGILINGL 152


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 211/419 (50%), Gaps = 10/419 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +F +M R  P  P   ++N +   L +       L     +  +G  PD YT + LI
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             +C+  +V     +  ++    F  + V++ +LI+GLC   RI EA  LF +      +
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----Q 251

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD+  Y  L+ GLC        L +   M     E G   +P+T  Y  ++D  C+E   
Sbjct: 252 PDMHMYAALVKGLCNAERGEEGLLMLRRMK----ELG--WRPSTRAYAAVVDFRCRERKA 305

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A+E+  +M ++ + P VVT T+VI  +C     ++A R+   M  +G +P+V T++ +
Sbjct: 306 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 365

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C  GK+ KA  LL  M   GVNP+  TYN LI G C+   I+ A +L   ME +G 
Sbjct: 366 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 425

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D  +YN LIN  CK+   ++A SL+  + ++GIKP  VT+N+L  GL +  + + A K
Sbjct: 426 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 485

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ++M       DTYTY++FI+ LCK     E L     +     + + V+Y  +I  L
Sbjct: 486 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 544



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 189/401 (47%), Gaps = 10/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+  L   L +    D  + LF  ++     PD++ ++ L+   C   R   G ++L 
Sbjct: 223 VVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLR 278

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+    + P+   + +++   C E +  EA  +  +       P V T   +IN  C+ G
Sbjct: 279 RMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 338

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL + E M          CKPN  TYN ++ G C EG V KA  L  KM+   +NP
Sbjct: 339 RMSDALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP 392

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY  +IRG C       A RL   M   G+  D  T++ +++ LCK+G+ D+A  L 
Sbjct: 393 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 452

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  RG+ PN  T+N+LI+G C + K D A K    M S GC  D  +Y++ I   CK 
Sbjct: 453 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 512

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K  +E LS   EML K +KP+ V Y  +   L +        + + EM  +    D  TY
Sbjct: 513 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 572

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +   C  G + EA  +   +  +   ++ ++YN L+DG
Sbjct: 573 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 186/424 (43%), Gaps = 48/424 (11%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGL 187
           + + +   GL P + T + +IN +CK GR+S    VL  + LR C  PN  T+ +L++G 
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC-KPNVWTYNALVQGF 369

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG------ 241
           C E ++ +A  L  K R     PD  TYN LI G C  GH   A  L   M         
Sbjct: 370 CNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 429

Query: 242 ---NGEFGVVCK--------------------PNTVTYNTIIDGLCKEGFVDKAKELFLK 278
              N     +CK                    PN VT+N++I+GLCK G  D A +   K
Sbjct: 430 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M      PD  TY+S I   C      E      EM+ + V+P  V +++++ +L K   
Sbjct: 490 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 549

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
               +R    M+  G NP+  TY T +  YC+  +++ A  + + M  NG   D ++YNT
Sbjct: 550 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 609

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK--------- 449
           L++ +      + A+S+  +M S    P   TY  L   L  +  VE  L          
Sbjct: 610 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 669

Query: 450 --------LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
                   LFD M++N    ++ TY++ ++G  + G   EA  L   +++    LN   Y
Sbjct: 670 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 729

Query: 502 NCLI 505
             L+
Sbjct: 730 TALV 733



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 203/473 (42%), Gaps = 59/473 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL + + M ++    P V ++N L             ++L  ++ + G+ PD  T+++
Sbjct: 341 SDALRVLELM-KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C  G +   F +L  +       +  T+ +LI  LC + R  +A +LF       
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+  T+N+LINGLC++G   +A    E+M +        C P+T TY++ I+ LCK  
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTYTYSSFIEHLCKMK 513

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +      +M  +++ P  V YT VI       ++    R + EM+  G  PDVVT++
Sbjct: 514 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 573

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             M   C  G++++A  +L  M   GV  +T  YNTL+DG+    + DHA  +   M S 
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 633

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-----------------PTVVT 430
             + +  +Y  L+    + + VE+ L L    + K I+                 P   T
Sbjct: 634 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 693

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVA--ADTYT----------------------- 465
           Y+++  G  E  + E A  L   M+ + ++   D YT                       
Sbjct: 694 YSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMI 753

Query: 466 ----------YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                     Y + + GL   G   +A E+F   R   Y  + + +  +IDGL
Sbjct: 754 QHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 806



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 20/349 (5%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  +   F++  CK  G          E L     ML+    P  V+ + I+   L K +
Sbjct: 498 DTYTYSSFIEHLCKMKGS--------QEGLSFIGEMLQKDVKPSTVN-YTIVIHKLLKER 548

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           +Y  V   +  + S+G  PD+ T++  +  +C  GR++    VL  + ++  T + + + 
Sbjct: 549 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 608

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE----- 236
           +L+ G  +  +   A ++  +    A  P+ FTY  L+  L R       L L       
Sbjct: 609 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 668

Query: 237 --EMANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
             E+ +  G F V+ K    PN+ TY++I++G  ++G  ++A  L   MK+++I+ +   
Sbjct: 669 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 728

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YT+++  FC +  + +A  L   M+  G  P ++++  ++  L   G+ DKA  +     
Sbjct: 729 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSR 788

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           W+  +P+   +  +IDG       D +R++ + +E   C     +Y  L
Sbjct: 789 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 837



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 155/395 (39%), Gaps = 51/395 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD  L      P   +FN L   L K+   D      +++ SAG  PD YT+S 
Sbjct: 446 DQACSLFDS-LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 504

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   CKM     G   +G +L+    P+ V +T +I  L  E      A  + +     
Sbjct: 505 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 564

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFG------ 246
           C PDV TY T +   C  G    A N+  EM+               +G+   G      
Sbjct: 565 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 624

Query: 247 --------VVCKPNTVTYNTIIDGLCKEGFVD-----------KAKEL------FLKMKD 281
                   V   PN  TY  ++  L +   V+           KA EL      F  MK 
Sbjct: 625 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 684

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+  TY+S++ GF       EA  L   M +  +  +   ++ ++   CK+ +   
Sbjct: 685 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 744

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L+  MI  G  P   +Y  L+ G     + D A+++F++        D + +  +I+
Sbjct: 745 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 804

Query: 402 WYCK--NKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
              K  + D+   + +  E ++   +P+  TY  L
Sbjct: 805 GLIKKGHSDISREMIIMLERMN--CRPSHQTYAML 837



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---------- 158
           ++N L    A     D  +S+ K++ S    P+ +T+ IL+    +M  V          
Sbjct: 606 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 665

Query: 159 -------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--KHRVFACE 209
                  +  F +   + ++ F PN+ T++S+++G   + R  EA +L +  K    +  
Sbjct: 666 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 725

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D++T   L+   C++   + A  L   M     + G +  P  ++Y  ++ GL  EG  
Sbjct: 726 EDIYT--ALVTCFCKSKRYLDAWVLVCSMI----QHGFI--PQLMSYQHLLSGLICEGQT 777

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DKAKE+F+  + ++ +PD + +  +I G       + ++ + I +     +P   T++++
Sbjct: 778 DKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 837

Query: 330 MDEL 333
            +EL
Sbjct: 838 TEEL 841


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 205/396 (51%), Gaps = 10/396 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL IF  M+ M   P     + ++ G L K    D   S F+R+  +G  PD  T+++
Sbjct: 104 DKALQIFHQMIDMKVKPDAFL-YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTV 162

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   K  +   G  +   +L    +P  VT+ +++ G C   RI +A +L  + +   
Sbjct: 163 LVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 222

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    Y+TLI+GLC+      A  LFE MA G+ +       + + Y + I GLCK G
Sbjct: 223 RSPSGSLYSTLIDGLCKHDRHDEARELFE-MAAGDVQ-------DVIVYTSFISGLCKAG 274

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+AK + +KM +    PD V+Y  +I   C  N  +EAK L  + M++   P V   +
Sbjct: 275 KLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCT 334

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVN-PNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           V++D LCK+ ++++A  +LE M+  G   P+  TY+ +IDG C  D++D A  +   M  
Sbjct: 335 VLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRR 394

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC+ DVV+Y  +I+ +CK   ++EA  L+  M  +G    VV YN L  G     +V+ 
Sbjct: 395 AGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDE 454

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           A+ + +EM    +  +  + +  +DGLCK   V EA
Sbjct: 455 AIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 207/405 (51%), Gaps = 9/405 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L +    D  L +F ++    + PD + ++++I   CK+ ++      
Sbjct: 85  PTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 144

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+++S   P+ VT+T L+  L    +  +   +F +       P++ TY T++NG C+
Sbjct: 145 FERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 204

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+L   +  G G       P+   Y+T+IDGLCK    D+A+ELF +M   ++
Sbjct: 205 AGRIDQALSLMRRL-KGTGR-----SPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDV 257

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DV+ YTS I G C A   +EAK + ++M++ G  PD V+++VI+  LCK+ ++ +A  
Sbjct: 258 Q-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 316

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWY 403
           L++  + R   P       L+DG C + +++ A  +   M E+      VV+Y+ +I+  
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL 376

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   +++A  +  +M   G  P VVTY  +     ++ +++ A +LF  M     A D 
Sbjct: 377 CKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDV 436

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             YN  I G C++  V EA+ +   +     + N+VS + ++DGL
Sbjct: 437 VAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 199/414 (48%), Gaps = 40/414 (9%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D +++LF+        PD +T+  LI  FCK  ++     +LG +  +  TP  VTF SL
Sbjct: 42  DELVTLFR--------PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSL 93

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN- 242
           I+ LC  +   +A  +F +      +PD F Y  +I  LC+     +A + FE M     
Sbjct: 94  IRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGC 153

Query: 243 -----------GEFGVVCK-----------------PNTVTYNTIIDGLCKEGFVDKAKE 274
                            CK                 P  VTY T+++G CK G +D+A  
Sbjct: 154 LPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALS 213

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L  ++K    +P    Y+++I G C  +  +EA+ LF EM    VQ DV+ ++  +  LC
Sbjct: 214 LMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDVQ-DVIVYTSFISGLC 271

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K GK+D+A  +   MI  G  P+  +YN +I   C  +++  A++L        CM  V 
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVP 331

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIK-PTVVTYNTLFLGLFEIHQVERALKLFDE 453
               L++  CK++ VEEA  +   ML  G + P+VVTY+ +  GL +  +++ A  +  +
Sbjct: 332 VCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQK 391

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           MRR     D  TY   ID  CK G + EA ELF+ + +    L++V+YN LI G
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRG 445



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 8/295 (2%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           + +T N+L+      G    A  +F++      E   + +P+  TY T+I G CK   + 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKD------ELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A  L  +MK   I P +VT+ S+IR  C  N  ++A ++F +M+D  V+PD   ++V++
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             LCK  K+D A+   E M+  G  P+  TY  L+       K +   ++F  M S G  
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            ++V+Y T++N YCK   +++ALSL   +   G  P+   Y+TL  GL +  + + A +L
Sbjct: 190 PELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL 249

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           F EM    V  D   Y +FI GLCK+G + EA  +   + ++    + VSYN +I
Sbjct: 250 F-EMAAGDV-QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVII 302



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 10/261 (3%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN---PDVVTYTSVIRGFCYANDWNEAK 308
           NT T N++++    +G   +A  +F   KDE +    PD  TY ++IRGFC A    +A 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVF---KDELVTLFRPDDFTYGTLIRGFCKAEQIPQAV 72

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM   G+ P +VTF  ++ +LC+    DKA ++   MI   V P+ + Y  +I   
Sbjct: 73  NLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHL 132

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  +K+D A   F  M  +GC+ D V+Y  L++   K    E+   ++ EMLSKG  P +
Sbjct: 133 CKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR- 487
           VTY T+  G  +  ++++AL L   ++    +     Y+  IDGLCK     EA ELF  
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM 252

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           A  D +   +++ Y   I GL
Sbjct: 253 AAGDVQ---DVIVYTSFISGL 270



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 8/184 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSILINCFCKMGRVSHGFV 163
           P V    +L   L K++  +    + +R+   G   P + T+S +I+  CK  R+   +V
Sbjct: 328 PGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYV 387

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL ++ R+   P+ VT+T++I   C   R+ EA  LF +     C  DV  YN LI G C
Sbjct: 388 VLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYC 447

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R      A+ + EEMA G G      +PN V+ +TI+DGLCKE  V++A+ L  KM  E+
Sbjct: 448 RAAKVDEAIAMIEEMA-GRG-----IQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFES 501

Query: 284 INPD 287
           + PD
Sbjct: 502 L-PD 504



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 35/226 (15%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G Q +  T + +++    +G   +A R+ +  +     P+ +TY TLI G+C  ++I  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV--------- 428
             L   M++ G    +V++ +LI   C+    ++AL ++ +M+   +KP           
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 429 --------------------------VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
                                     VTY  L   LF+  + E+  ++F+EM     + +
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY   ++G CK+G + +AL L R ++ +    +   Y+ LIDGL
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 75/151 (49%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  I + ML      P V +++ +   L K    D    + +++  AG  PD+ T++ 
Sbjct: 347 EEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTA 406

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ FCK+GR+     +  R+       + V +  LI+G C  +++ EA A+  +     
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
            +P+V + +T+++GLC+      A  L E+M
Sbjct: 467 IQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 211/434 (48%), Gaps = 34/434 (7%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R+ P P    S N L   L+K    D     FK + +AG+   ++T++I+I+  CK G +
Sbjct: 16  RVFPKP---RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 72

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +  ++  + FTP+ VT+ SLI G      + E   +F + +   C+PDV TYN L
Sbjct: 73  EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 132

Query: 219 INGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           IN  C+      A     EM ANG        KPN VTY+T ID  CKEG + +A + F+
Sbjct: 133 INCFCKFERMPKAFEFLHEMKANG-------LKPNVVTYSTFIDAFCKEGMLQEAIKFFV 185

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+   + P+  TYTS+I   C A +  EA +L  E++  G++ +VVT++ ++D LC+ G
Sbjct: 186 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 245

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +M +A  +   M+  GV PN  TY  L+ G+    ++++A+ +   M+      D++ Y 
Sbjct: 246 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 305

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL--------- 448
           T++   C    +EEA  L  E+   GI    V Y TL    F+  Q   AL         
Sbjct: 306 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL 365

Query: 449 --------------KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                         KLFDEM    +  D   Y   IDG  K G + EAL L   + +   
Sbjct: 366 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 425

Query: 495 ELNIVSYNCLIDGL 508
           EL++ +Y  LI GL
Sbjct: 426 ELDLHAYTALIWGL 439



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 199/404 (49%), Gaps = 29/404 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L     K    D  + +F+++  A   PD+ T++ LINCFCK  R+   F  
Sbjct: 89  PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 148

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PN VT+++ I   C E  + EA   F   R  A  P+ FTY +LI+  C+
Sbjct: 149 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL L EE+           K N VTY  ++DGLC+EG + +A+E+F  M +  +
Sbjct: 209 AGNLAEALKLVEEILQAG------IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 262

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+  TYT+++ GF  A +   AK +  EM ++ ++PD++ +  I+  LC   ++++A  
Sbjct: 263 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 322

Query: 345 LLELMIWRGVNPNTYTYNTLIDGY-----------------------CLTDKIDHARKLF 381
           L+  +   G+N N   Y TL+D Y                       C  +  + A+KLF
Sbjct: 323 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLF 382

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M   G M D ++Y  LI+   K+ +++EAL+L   M+  G++  +  Y  L  GL   
Sbjct: 383 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 442

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            QV++A  L DEM    V  D   Y   I      G V EALEL
Sbjct: 443 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 486



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 28/384 (7%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGR--VSHGF---VVLGRILRSCFTPNAVTFTSLI 184
           F ++    +FP   + + L++   K+GR  +S  F   +    I RS FT N      +I
Sbjct: 9   FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI-----MI 63

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
             LC E  +  A +LFT+ +     PD+ TYN+LI+G  + G     + +FE+M + +  
Sbjct: 64  DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD-- 121

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C P+ +TYN +I+  CK   + KA E   +MK   + P+VVTY++ I  FC     
Sbjct: 122 ----CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            EA + F++M    + P+  T++ ++D  CK G + +A +L+E ++  G+  N  TY  L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +DG C   ++  A ++F +M + G   +  +Y  L++ + K K++E A  +  EM  K I
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP ++ Y T+  GL    ++E A  L  E++ + +  +   Y   +D   KSG   EAL 
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   + D            L+DGL
Sbjct: 358 LLEEMLD------------LVDGL 369



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 164/314 (52%), Gaps = 6/314 (1%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA+  F K R F   P   + N L++ L + G   ++   F++M    G  G+  K +  
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGI--KRSVF 57

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TYN +ID LCKEG ++ A+ LF +MK+    PD+VTY S+I G       +E   +F +M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            D    PDV+T++ +++  CK  +M KA   L  M   G+ PN  TY+T ID +C    +
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A K FV M       +  +Y +LI+  CK  ++ EAL L  E+L  GIK  VVTY  L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL E  +++ A ++F  M    VA +  TY   + G  K+  +  A ++ + +++   
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 495 ELNIVSYNCLIDGL 508
           + +++ Y  ++ GL
Sbjct: 298 KPDLLLYGTILWGL 311



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 176/400 (44%), Gaps = 55/400 (13%)

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
            G G + L+  +E +CIF+ M +     P V ++N L  C  K +           + + 
Sbjct: 99  DGHGKLGLL--DECICIFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 155

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           GL P++ T+S  I+ FCK G +         + R   TPN  T+TSLI   C    + EA
Sbjct: 156 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA 215

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------------- 242
             L  +      + +V TY  L++GLC  G    A  +F  M N                
Sbjct: 216 LKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHG 275

Query: 243 --------------GEFGVVC-KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                          E    C KP+ + Y TI+ GLC E  +++AK L  ++K+  IN +
Sbjct: 276 FIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTN 335

Query: 288 VVTYTSV-----------------------IRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            V YT++                       + G C  N +  AK+LF EM+D+G+ PD +
Sbjct: 336 AVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI 395

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            ++ ++D   K+G + +A  L + MI  G+  + + Y  LI G   + ++  AR L   M
Sbjct: 396 AYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 455

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
              G + D V Y  LI  Y     V+EAL L +EM  +G+
Sbjct: 456 IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 134/241 (55%)

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A E FLKM+   + P   +  +++         + +++ F +M   G++  V T++
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D LCK G ++ A  L   M   G  P+  TYN+LIDG+     +D    +F  M+  
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  DV++YN LIN +CK + + +A     EM + G+KP VVTY+T      +   ++ A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +K F +MRR  +  + +TY + ID  CK+G + EAL+L   I  +  +LN+V+Y  L+DG
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 508 L 508
           L
Sbjct: 241 L 241


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 221/418 (52%), Gaps = 13/418 (3%)

Query: 96  YMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHSILINC 151
           Y+L   PS    P    +N L G   +N  ++  + ++++L    G  P++ T++++++ 
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            CK+G       V  R++ +   P+ +T+ ++I GLC  + +  AA ++++       PD
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V  YN+L+ G C  G    A   ++ M+       V    N  +YN ++ GL   G VDK
Sbjct: 335 VVIYNSLLKGFCHAGRVGEAWKFWDSMS-------VSGIRNVTSYNIMLKGLFDGGMVDK 387

Query: 272 AKELF-LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           A +L+ L  KD++++PD+VT++++I G C     N++ ++  E    G + D  ++S ++
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             LCK+G++D A +L E +      PN++ YN LI+G+C   K   A +++  M  N C 
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
              ++YNTLI+  CK +   EA     EML KG    V TY +L  GL    +++ AL L
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-NIVSYNCLIDG 507
           ++++    +  D   +N  I GLC +G V EA +L   +++      N+V+YN L+DG
Sbjct: 568 WNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 210/440 (47%), Gaps = 42/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NI+   L      D  ++LF  L   GL PD  T+S L++ F K  R+ +   +
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYL 216

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLC 223
           L  +      P+AV + +L+ G        +A  ++ +  R     P++ TYN +++GLC
Sbjct: 217 LDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A +++E M   N +      P+ +TY T+I GLC+   VD A  ++ +M    
Sbjct: 277 KLGMFKEAGDVWERMVANNHQ------PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ----------------------- 320
           + PDVV Y S+++GFC+A    EA + +  M   G++                       
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATD 390

Query: 321 ------------PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
                       PD+VTFS ++  LC+ G  +K+ ++LE     G   + ++Y+++I G 
Sbjct: 391 LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGL 450

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   ++D A KL+  +  +    +   YN LIN +C+     +A+ +YS+M      PT 
Sbjct: 451 CKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTT 510

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TYNTL  GL +  +   A +   EM       D  TY + I GLC+   +  AL L+  
Sbjct: 511 ITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQ 570

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I D   + ++V +N LI GL
Sbjct: 571 ILDKGLQTDVVMHNILIHGL 590



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 183/341 (53%), Gaps = 8/341 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLN-SAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V+S+NI+   L      D    L++ L     L PD+ T S +I+  C+ G  +    +L
Sbjct: 369 VTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQIL 428

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
                S    +  +++S+I GLC + R+ +A  L+ K  + + +P+   YN LING C+ 
Sbjct: 429 EEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQA 488

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                A+ ++ +MA  +      C P T+TYNT+I GLCK     +A     +M ++   
Sbjct: 489 SKFSDAIRVYSQMAEND------CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCM 542

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            DV TY S+IRG C     + A  L+ +++D+G+Q DVV  ++++  LC  GK+D+AS+L
Sbjct: 543 LDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQL 602

Query: 346 LELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L  M  +    PN  TYNTL+DG+  T   D A  L++++  NG + D++SYNT I   C
Sbjct: 603 LSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLC 662

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 E + L +EML+ GI PT +T+N L   + +   ++
Sbjct: 663 SCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 209/425 (49%), Gaps = 43/425 (10%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +++ M+  +  P  ++   ++ G L ++   D+   ++  +   GL PD+  ++ L
Sbjct: 283 EAGDVWERMVANNHQPDMITYGTMIHG-LCRSTDVDSAARVYSEMIKTGLVPDVVIYNSL 341

Query: 149 INCFCKMGRVSHGFVVLGRI--------------LRSCF--------------------- 173
           +  FC  GRV   +     +              L+  F                     
Sbjct: 342 LKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSL 401

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           +P+ VTF+++I GLC +    ++  +  + R    E D F+Y+++I+GLC+ G    A+ 
Sbjct: 402 SPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVK 461

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L+E+++  +       KPN+  YN +I+G C+      A  ++ +M + + +P  +TY +
Sbjct: 462 LYEKISMDS------FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G C A  + EA R   EM+++G   DV T+  ++  LC++ K+D A  L   ++ +G
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           +  +   +N LI G C   K+D A +L   M E N C  +VV+YNTL++ + +    ++A
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            SL+  +L  G+ P +++YNT   GL   ++    ++L +EM  + +     T+N  +  
Sbjct: 636 ASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695

Query: 473 LCKSG 477
           + K G
Sbjct: 696 VIKYG 700



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 175/362 (48%), Gaps = 42/362 (11%)

Query: 187 LCAESR-IMEAAALFTKHRV---FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           L A SR +M  AAL    R+     C P V ++N L++   R      A   F  +++G 
Sbjct: 91  LSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHG- 149

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
             FG    PN  TYN ++  LC  G +D+A  LF  ++   + PD +TY++++ GF   N
Sbjct: 150 -AFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTY 361
             + A  L  EM    VQPD V ++ ++    +NG+ +KA R+ E ++   G +PN  TY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N ++DG C       A  ++  M +N    D+++Y T+I+  C++ DV+ A  +YSEM+ 
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--------------------------- 454
            G+ P VV YN+L  G     +V  A K +D M                           
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKA 388

Query: 455 --------RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
                   + + ++ D  T++  I GLC+ GF  ++L++    R S  EL+  SY+ +I 
Sbjct: 389 TDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMIS 448

Query: 507 GL 508
           GL
Sbjct: 449 GL 450


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 188/379 (49%), Gaps = 11/379 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +    LF+ +   G+ PD+Y ++ LI+ FCK G +      
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + R    PN VT+T+LI       ++ +A  ++       C P++ TY  LI+GLC+
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 225 TGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            G    A  +++ M   N E            G   +PN  TY  ++DGLCK   V +A+
Sbjct: 340 AGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEAR 399

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  E   P+ V Y ++I G C A   +EA+ +F  M++ G  P+V T+S ++D L
Sbjct: 400 DLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL 459

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D A ++L  M+     PN   Y  +IDG C   K D A KL V ME  GC  +V
Sbjct: 460 FKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K+  VE+ L L  +M SKG  P  VTY  L         ++ A KL +E
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579

Query: 454 MRRNHVAADTYTYNNFIDG 472
           M++ +       Y   I+G
Sbjct: 580 MKQTYWPRHVAGYRKVIEG 598



 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 23/409 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     ++   ++ + + S G  PD  T+S +I   C   +V   F +   + R+   P
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +   +T+LI   C    I +A   F +     C P+V TY  LI+   ++     A  ++
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN---------- 285
           E M +        C PN VTY  +IDGLCK G ++KA +++  MK EN+           
Sbjct: 316 EMMLSKG------CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRV 369

Query: 286 -------PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
                  P+V TY +++ G C A    EA+ L   M  +G +P+ V +  ++D  CK GK
Sbjct: 370 VDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGK 429

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A  +   M+  G +PN YTY++LID      ++D A K+   M  N C  +VV Y  
Sbjct: 430 LDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE 489

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I+  CK    +EA  L   M  KG  P VVTY  +  G  +  +VE+ L+L  +M    
Sbjct: 490 MIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            A +  TY   I+  C +G + EA +L   ++ + +  ++  Y  +I+G
Sbjct: 550 CAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEG 598



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 230/476 (48%), Gaps = 71/476 (14%)

Query: 94  FDYMLRMHPSP--PPVSSFNILF-GCLAKNK--HYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            D++ RM  S   P V ++ IL  GCL K K      +LS+   + + G +P     + L
Sbjct: 62  MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSM---MITEGCYPSPRIFNSL 118

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC---------------AESRI 193
           ++ +C+ G  ++ + +L ++++    P  V +  LI G+C               A   +
Sbjct: 119 VHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEM 178

Query: 194 MEAAALFTKHRV--FA---CE--------------------PDVFTYNTLINGLCRTGHT 228
           +EA  +  K  +  F+   C                     PD  TY+ +I  LC     
Sbjct: 179 LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKV 238

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LF+EM   NG       P+   Y T+ID  CK GF+++A+  F +M+ +   P+V
Sbjct: 239 EKAFQLFQEMKR-NG-----IAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNV 292

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT++I  +  +   ++A  ++  M+ +G  P++VT++ ++D LCK GK++KAS++ ++
Sbjct: 293 VTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKI 352

Query: 349 MIWRGV-----------------NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
           M    V                  PN +TY  L+DG C   ++  AR L  SM   GC  
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           + V Y+ LI+  CK   ++EA  +++ ML  G  P V TY++L   LF+  +++ ALK+ 
Sbjct: 413 NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVL 472

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +M  N  A +   Y   IDGLCK G   EA +L   + +     N+V+Y  +IDG
Sbjct: 473 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDG 528



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 202/432 (46%), Gaps = 66/432 (15%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +++ G   D +T     +  CK G+      +L +     F P+ V +T +I GLC  S 
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57

Query: 193 IMEAAALFTKHRVFACEPDVFTY-----------------------------------NT 217
             EA    T+ R  +C P+V TY                                   N+
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK-----EGFVDKA 272
           L++  CR+G    A  L ++M          C+P  V YN +I G+C      +  +D A
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCG------CQPGYVVYNILIGGICSSEEPGKDVLDLA 171

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           ++ + +M +  +  + V  ++  R  C    + +A  +  EMM +G  PD  T+S ++  
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC   K++KA +L + M   G+ P+ Y Y TLID +C    I+ AR  F  ME +GC  +
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+Y  LI+ Y K++ V +A  +Y  MLSKG  P +VTY  L  GL +  ++E+A +++ 
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 453 EMRRNHV-----------------AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            M++ +V                   + +TY   +DGLCK+  V EA +L +++     E
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE 411

Query: 496 LNIVSYNCLIDG 507
            N V Y+ LIDG
Sbjct: 412 PNHVVYDALIDG 423



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 206/437 (47%), Gaps = 34/437 (7%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M R     P V ++  L     K++       +++ + S G  P+I T++ LI+  C
Sbjct: 280 FDEMER-DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLC 338

Query: 154 KMGRVSHGFVVLGRILR------------------SCFTPNAVTFTSLIKGLCAESRIME 195
           K G++     +  +I++                  +   PN  T+ +L+ GLC   ++ E
Sbjct: 339 KAGKIEKASQIY-KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKE 397

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L     V  CEP+   Y+ LI+G C+ G    A  +F  M     E G    PN  T
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML----ECGY--DPNVYT 451

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+++ID L K+  +D A ++  KM + +  P+VV YT +I G C     +EA +L + M 
Sbjct: 452 YSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMME 511

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++G  P+VVT++ ++D   K+G+++K   LL+ M  +G  PN  TY  LI+  C T  +D
Sbjct: 512 EKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLD 571

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL   M+       V  Y  +I  +  N++   +L L  E+      P    Y  L 
Sbjct: 572 EAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYRVLI 629

Query: 436 LGLFEIHQVERALKLFDEMR--RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI--RD 491
               +  ++E AL+L +E+       AA+   +   I+ L  +    +A EL+  +  R 
Sbjct: 630 DNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRG 689

Query: 492 SKYELNIVSYNCLIDGL 508
           S  EL+I+ +  LI GL
Sbjct: 690 SIPELSILVH--LIKGL 704



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 41/360 (11%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F+ ++ A   P+++T+  L++  CK  +V     +L  +      PN V + +LI G C 
Sbjct: 367 FRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCK 426

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  +FT       +P+V+TY++LI+ L +     +AL +  +M   +      C
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS------C 480

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN V Y  +IDGLCK G  D+A +L + M+++  NP+VVTYT++I GF  +    +   
Sbjct: 481 APNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLE 540

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY- 368
           L  +M  +G  P+ VT+ V+++  C  G +D+A +LLE M       +   Y  +I+G+ 
Sbjct: 541 LLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFN 600

Query: 369 --------------------------CLTDKIDHARKLFVSMESNGCMHDVVSYN----- 397
                                      L D    A +L +++E N  +     ++     
Sbjct: 601 REFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQN 660

Query: 398 ---TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
              TLI         ++A  LY++M+S+G  P +     L  GL  +++ E AL+L D +
Sbjct: 661 IHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 49/338 (14%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D FT     + LC++G    AL+L E+      EF     P+TV Y  +I GLC+    +
Sbjct: 9   DEFTLGCFAHSLCKSGKWREALSLLEK-----EEF----VPDTVLYTKMISGLCEASLFE 59

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A +   +M+  +  P+V+TY  ++ G          KR+   M+ +G  P    F+ ++
Sbjct: 60  EAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLV 119

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT-----DKIDHARKLFVSME 385
              C++G    A +LL+ M+  G  P    YN LI G C +     D +D A K +  M 
Sbjct: 120 HAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEML 179

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G + + V+ +      C     E+A ++  EM+SKG  P   TY+ +   L    +VE
Sbjct: 180 EAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVE 239

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDS------------ 492
           +A +LF EM+RN +A D Y Y   ID  CK+GF+ +A   F  + RD             
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299

Query: 493 --------------KYEL--------NIVSYNCLIDGL 508
                          YE+        NIV+Y  LIDGL
Sbjct: 300 HAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 219/468 (46%), Gaps = 36/468 (7%)

Query: 30  HTRKPTSSISENEPSYPTTTSKLKESLRL----TVKDRASLKKFLKERCKSSG---QGDI 82
           H R+PT++     P   ++ +K   + RL    T + + + ++ L    + S    +GD+
Sbjct: 28  HPRQPTAAGGWLPPRLRSSGAKPPPTPRLESPTTRQQQQAPRRLLGSDRRLSALVHRGDL 87

Query: 83  NLITPNEALCIFDYMLRM---HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
                       D  LR+    P PP  +  N L   L +    D      + + + G  
Sbjct: 88  ------------DAALRLVESSPRPPDAALANRLVRDLCRRGRPDDA---ERVVGACGPA 132

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
             +  +  L + +C+ GR+     V+G +      PNA T+  LI  LC   ++ +A ++
Sbjct: 133 ATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSV 189

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNT 258
                   C PDV TYN L+   C+      A+ L + M A G       C PN VTYN 
Sbjct: 190 LDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG-------CTPNNVTYNV 242

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++DG+C EG VD A EL   +      P  V Y +V++G C A  W +A  L  EM+ + 
Sbjct: 243 LMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 302

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P+  TF+V++  LC+ G + +A +LLE M   G   N  TYN +I+G C    +D A 
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAM 362

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L   M+S GC  D+V+YNTL+   C      +A  L   M   G  P  VT+NTL   L
Sbjct: 363 GLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 422

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +   +  A+++F +M       ++ TY+  I GL K+  + +ALELF
Sbjct: 423 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 470



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 196/398 (49%), Gaps = 8/398 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D ML      P V ++NIL     K + Y   + L   + + G  P+  T+++L
Sbjct: 185 DALSVLDDML-CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 243

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  C  G V     +L  +      P+ V + +++KGLC+  R  +A  L T+     C
Sbjct: 244 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 303

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T+N +I  LCR G    A+ L E+M+         C  N VTYN II+GLC++  
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG------CTANIVTYNAIINGLCEQRN 357

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A  L  KMK     PD+VTY ++++G C A  W +A+ L   M   G  PD VTF+ 
Sbjct: 358 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+ G M  A  + + M  +G  PN+ TY+T+I G     K+D A +LF  M   G
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D + Y  L      +  +EEA+    ++   GI P  V YN + LGL    + E A+
Sbjct: 478 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 536

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +   M  +    D  TY   I+GL   G++ EA EL 
Sbjct: 537 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 188/369 (50%), Gaps = 7/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+ YT++ LI+  C+ G+V     VL  +L     P+ VT+  L++  C      +A  L
Sbjct: 165 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 224

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               R   C P+  TYN L++G+C  G    AL L   + +        CKP+TV YNT+
Sbjct: 225 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG------CKPSTVNYNTV 278

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           + GLC       A EL  +M  EN  P+  T+  VI   C      +A +L  +M   G 
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
             ++VT++ I++ LC+   +D A  LL  M   G  P+  TYNTL+ G C   +   A +
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L  +M  NGC+ D V++NTLI + C+   + +A+ ++ +M  KG  P  +TY+T+  GL 
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  ++++AL+LF+EM       D   Y    + L     + EA++  R ++DS    + V
Sbjct: 459 KATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 517

Query: 500 SYNCLIDGL 508
            YN ++ GL
Sbjct: 518 LYNAILLGL 526



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 192/389 (49%), Gaps = 16/389 (4%)

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA--VT 179
           H   + +  + + S+   PD    + L+   C+ GR      V+G    +C  P A  V 
Sbjct: 83  HRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVG----AC-GPAATVVA 137

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           + +L  G C   R+ +A  +     V   +P+ +TYN LI+ LC  G    AL++ ++M 
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGMPV---QPNAYTYNPLIHTLCERGQVRDALSVLDDM- 193

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                    C P+ VTYN +++  CK     +A EL   M+ E   P+ VTY  ++ G C
Sbjct: 194 -----LCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
              D ++A  L   +   G +P  V ++ ++  LC   +   A  L+  M+     PN  
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 308

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           T+N +I   C    +  A +L   M  +GC  ++V+YN +IN  C+ ++V+ A+ L S+M
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
            S G KP +VTYNTL  GL    Q   A +L D M +N    D  T+N  I  LC+ G +
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++A+E+F+ + D     N ++Y+ +I GL
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGL 457



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 175/347 (50%), Gaps = 13/347 (3%)

Query: 78  GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           G+GD++     +AL +    L  H   P   ++N +   L   + +     L   +    
Sbjct: 249 GEGDVD-----DALELL-RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 302

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
             P+  T +++I   C+ G +     +L ++ +   T N VT+ ++I GLC +  +  A 
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAM 362

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            L +K + + C+PD+ TYNTL+ GLC     + A  L + M   NG     C P+ VT+N
Sbjct: 363 GLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ-NG-----CLPDNVTFN 416

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T+I  LC++G +  A E+F +M D+   P+ +TY+++I G   A   ++A  LF EM  +
Sbjct: 417 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 476

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  PD + + ++ + L  +  +++A + +  +   G++P+T  YN ++ G C   K + A
Sbjct: 477 GFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 535

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
             +   M S+GCM D ++Y  LI        + EA  L  ++ S+ +
Sbjct: 536 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 582



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 169/333 (50%), Gaps = 23/333 (6%)

Query: 69  FLKERCKSSGQGDIN-LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVL 127
            LK  C +   GD + L+T          MLR +  PP  ++FN++   L +       +
Sbjct: 278 VLKGLCSAERWGDADELVT---------EMLREN-CPPNEATFNVVIYSLCRKGLLQQAI 327

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
            L ++++  G   +I T++ +IN  C+   V     +L ++      P+ VT+ +L+KGL
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C+ ++ ++A  L        C PD  T+NTLI  LC+ G  + A+ +F++M +       
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG----- 442

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C PN++TY+TII GL K   +D+A ELF +M  +  NPD + Y  +       +   EA
Sbjct: 443 -CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEA 500

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            +   ++ D G+ P  V ++ I+  LC+NGK + A  ++  M+  G  P+  TY  LI+G
Sbjct: 501 IQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEG 560

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
                 ++ AR+L + +    C  DV+  N+LI
Sbjct: 561 LAYEGYLNEARELLIKL----CSRDVL-VNSLI 588


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 202/436 (46%), Gaps = 41/436 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N L   L K         +F  +   G+ PD+Y  S ++N FC  GRV     +
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++ +    PN VT+ ++I GLC   R+ EA     K      +P + TY  LINGL +
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + +EM++          PN V YNT+IDG C+ G +  A ++   M    I
Sbjct: 280 LERFDEANCILKEMSDRG------YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGI 333

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG-------------------------- 318
           +P+ VT  S+I+G+C +N    A+ L  EM+  G                          
Sbjct: 334 SPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALL 393

Query: 319 ---------VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                     +P+    ++++  LC+NGK  +A  L   ++ +G   NT T N LI G C
Sbjct: 394 FIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLC 453

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                + A KL   M   G + D +SYNTLI   CK   VEE   L  EM+ +GI+P + 
Sbjct: 454 EAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMY 513

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L  GL  + ++E A  L+ E ++N    D YTY   IDG CK+  V E  +LF+ +
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573

Query: 490 RDSKYELNIVSYNCLI 505
              K E N V Y  LI
Sbjct: 574 VTMKIEQNAVVYGTLI 589



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 218/484 (45%), Gaps = 65/484 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ +F  M ++  +P  V+  NI+ G L KN   D      +++    + P + T+ +
Sbjct: 214 DDAIELFRKMEKVGVAPNVVTYNNIIHG-LCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN   K+ R      +L  +    + PN V + +LI G C    I  A  +        
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------------EFGVVC------ 249
             P+  T N+LI G C++     A +L EEM  G G               + C      
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392

Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KPN      ++ GLC+ G   +A EL+ ++ ++    + VT  ++I G 
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A    EA +L  EM+++G+  D ++++ ++   CK GK+++  +L E M+ RG+ P+ 
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512

Query: 359 YTYNTL-----------------------------------IDGYCLTDKIDHARKLFVS 383
           YTYN L                                   IDGYC  ++++   KLF  
Sbjct: 513 YTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M +     + V Y TLI  YC+N ++ EA  L  +M S+GI  T  TY++L  GL  I  
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V+ A +L DEMR+  ++ +   Y   I G CK G + +   + + +  +    N ++Y  
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692

Query: 504 LIDG 507
           +I+G
Sbjct: 693 MING 696



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 186/385 (48%), Gaps = 6/385 (1%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           +D+ L     +      P+    ++L++  C+ G+ S    +  R+L   F  N VT  +
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           LI GLC      EAA L  +        D  +YNTLI   C+ G       L EEM    
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV--- 504

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
              G+  +P+  TYN ++ GLC  G +++A  L+ + K     PD  TY  +I G+C AN
Sbjct: 505 -RRGI--QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKAN 561

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              E ++LF EM+   ++ + V +  ++   C+NG M +A RL + M  RG+   + TY+
Sbjct: 562 RVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYS 621

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +LI G      +D A +L   M   G   +VV Y  LI  YCK   + +  S+  EM   
Sbjct: 622 SLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSIN 681

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            + P  +TY  +  G  ++  ++ A KL +EM +  +  D  TYN   +G CK G + EA
Sbjct: 682 NVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEA 741

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
           L++   +      L+ ++Y  LIDG
Sbjct: 742 LKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+N L     K    +    L + +   G+ PD+YT+++L++  C MG++     +    
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            ++   P+A T+  +I G C  +R+ E   LF +      E +   Y TLI   C  G+ 
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598

Query: 229 IVALNLFEEMANGNGEFGVVCKPNT-VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A  L ++M +     G+   P T  TY+++I GL   G VD A +L  +M+ E ++P+
Sbjct: 599 REAFRLRDDMRSR----GI---PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPN 651

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           VV YT++I G+C     ++   +  EM    V P+ +T++++++  CK G M  A++LL 
Sbjct: 652 VVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLN 711

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            M  +G+ P+  TYN L +G+C   K++ A K+   M + G   D ++Y TLI+ + K
Sbjct: 712 EMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 113/235 (48%)

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           ELF  + ++ + P + T   ++     AN+   + ++F  M   GV PDV  FS +++  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C  G++D A  L   M   GV PN  TYN +I G C   ++D A +    ME       +
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  LIN   K +  +EA  +  EM  +G  P  V YNTL  G   I  +  AL++ D+
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M  N ++ ++ T N+ I G CKS  +  A  L   +      +N  ++  +I  L
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 6/168 (3%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R    P   ++++ L   L+     D+   L   +   GL P++  ++ LI  +CK+G+
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +L  +  +   PN +T+T +I G C    +  AA L  +       PD  TYN 
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA 727

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           L NG C+ G    AL + + M+ G          + +TY T+IDG  K
Sbjct: 728 LTNGFCKEGKMEEALKVCDLMSTGGISL------DDITYTTLIDGWHK 769


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 221/432 (51%), Gaps = 16/432 (3%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
            +  P+EAL +F  +  +    P + + N +   L K      V  LF  +   G+ P +
Sbjct: 118 QMALPDEALSVFGRLREL----PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSV 173

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            T++ LIN     G V+  + V  +++     PN VT+T++I  LC E  I +A  LF +
Sbjct: 174 VTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLE 233

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +     P+++TYN L++   +  +   AL  + ++     + G+V  PN V + T+IDG
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDG 287

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LC+   + +AK +FL M    + P V  Y S+I G   +    EA   F E++ +G++PD
Sbjct: 288 LCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPD 347

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             T S+++  LC  G+M  A+R LE+M   G+  N   YN LID YC +  +D A     
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   G   +VV+Y++LI+ + KN ++E A+++Y+EM++KG++P VVTY  L  G  +  
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE------L 496
            ++ A  L  EM    + ++  T +  +DGLC+   V +A+         K         
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIA 527

Query: 497 NIVSYNCLIDGL 508
           N V+Y  LI GL
Sbjct: 528 NSVTYMTLIYGL 539



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 202/416 (48%), Gaps = 22/416 (5%)

Query: 79  QGDINLITPNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           QGD+      +A  ++D M+  R+ P+   V ++  +   L +         LF  +  A
Sbjct: 186 QGDVA-----KAWEVWDQMVARRIDPN---VVTYTTMICALCEEDCIGDAEGLFLEMKEA 237

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++YT++ L++   K   + H  V    +L+    PN V FT+LI GLC  +RI EA
Sbjct: 238 GMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEA 297

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +F     +   P V  YN+LI+G  R+G+   AL  F+E+           +P+  T 
Sbjct: 298 KNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKG------LRPDEFTC 351

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + ++ GLC  G +  A      M+   I  +   Y  +I  +C + + +EA      M +
Sbjct: 352 SIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSE 411

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV+P+VVT+S ++D   KNG+M+ A  +   M+ +GV PN  TY  LI G+     +D 
Sbjct: 412 VGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 471

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL---YSEMLSKGIKPTV---VT 430
           A  L   ME  G   + ++ + L++  C+   V++A+     YS        P++   VT
Sbjct: 472 AFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVT 531

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           Y TL  GL+   Q   A   F  MR + +  D +TY   I GLC  G+VL A+ L+
Sbjct: 532 YMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 2/215 (0%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +++N+L     K+ + D  L    R++  G+ P++ T+S LI+   K G +     +   
Sbjct: 384 AAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTG 226
           ++     PN VT+T+LI G  A++  M+AA    K         +  T + L++GLCR  
Sbjct: 444 MVAKGVEPNVVTYTALIHGH-AKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 502

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+    E +            N+VTY T+I GL  +G  ++A   F  M+D  + P
Sbjct: 503 RVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVP 562

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           D  TYT VIRG C       A  L+ +M+  GV+P
Sbjct: 563 DRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 198/381 (51%), Gaps = 13/381 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKM 155
           +LR  P P  V+ +N +             L + + +    G+ P+ YT+  +I+ +CK+
Sbjct: 505 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 156 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDV 212
           GRV     V   +L +    P AV + +LI G C + ++    AL  + R+        V
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL--DTALLYRDRMVERGVAMTV 621

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN L++ L   G    A  L EEM       G    P+  TYN +I+G CKEG V KA
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMG------GKGLAPDVFTYNILINGHCKEGNVKKA 675

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+F  M    +   VVTYT++I          E  +LF E + +G++PD+V ++ +++ 
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 735

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              +G +D+A  ++  M  + + P+  TYNTL+ G CL  ++D ARKL   M   G   D
Sbjct: 736 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+YNTLI+ Y    DV++AL + +EM++KG  PT++TYN L  GL +  Q + A  +  
Sbjct: 796 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 855

Query: 453 EMRRNHVAADTYTYNNFIDGL 473
           EM  N +  D  TY + I+GL
Sbjct: 856 EMVENGITPDDSTYISLIEGL 876



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 198/435 (45%), Gaps = 41/435 (9%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----------------------GLFPDIY 143
           P S  N+L    A  + + T L L+ R+ S                        LF D++
Sbjct: 416 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMF 475

Query: 144 ---------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
                    T +I++   C  G+ +        +LR    PNAVT+ ++I G C+  R+ 
Sbjct: 476 RLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQ 531

Query: 195 EAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            A  +  + R      P+ +TY T+I+G C+ G    A+ +F+EM    GE     KP  
Sbjct: 532 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEV----KPEA 586

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V YN +I G C +G +D A     +M +  +   V TY  ++          EA  L  E
Sbjct: 587 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 646

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G+ PDV T++++++  CK G + KA  + E M  RGV     TY  LI       +
Sbjct: 647 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 706

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +    KLF      G   D+V YN LIN +  + +++ A  +  EM  K I P  VTYNT
Sbjct: 707 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 766

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  GL  + +V+ A KL DEM    +  D  TYN  I G    G V +AL +   + +  
Sbjct: 767 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826

Query: 494 YELNIVSYNCLIDGL 508
           +   +++YN LI GL
Sbjct: 827 FNPTLLTYNALIQGL 841



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 204/424 (48%), Gaps = 19/424 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M R+   P   ++FNI+   L         L L +++      P+  T++ +I
Sbjct: 467 AFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 521

Query: 150 NCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALF----TKHR 204
             FC  GRV     ++  +  R    PN  T+ ++I G C   R+ EA  +F    TK  
Sbjct: 522 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 581

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           V   +P+   YN LI G C  G    AL   + M     E GV       TYN ++  L 
Sbjct: 582 V---KPEAVMYNALIGGYCDQGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALF 632

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G   +A EL  +M  + + PDV TY  +I G C   +  +A  +F  M  +GV+  VV
Sbjct: 633 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 692

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++  L K G++ +  +L +  + RG+ P+   YN LI+ +  +  ID A ++   M
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E      D V+YNTL+   C    V+EA  L  EM  +GI+P +VTYNTL  G      V
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL++ +EM          TYN  I GLCK+G   +A  + + + ++    +  +Y  L
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872

Query: 505 IDGL 508
           I+GL
Sbjct: 873 IEGL 876



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 8/274 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+L   L  +        L + +   GL PD++T++ILIN  CK G V     +  
Sbjct: 621 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 680

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R       VT+T+LI  L  + ++ E   LF +       PD+  YN LIN    +G
Sbjct: 681 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 740

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  +  EM            P+ VTYNT++ GLC  G VD+A++L  +M +  I P
Sbjct: 741 NIDRAFEIMGEMEKKR------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 794

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY ++I G+    D  +A R+  EMM++G  P ++T++ ++  LCKNG+ D A  ++
Sbjct: 795 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 854

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDK--IDHAR 378
           + M+  G+ P+  TY +LI+G    D+  ID  R
Sbjct: 855 KEMVENGITPDDSTYISLIEGLTTEDERAIDDER 888


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 7/382 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           ++F  +++ G++PD  T+  +I  +C+ G V      +  ++   F  +  T T +I   
Sbjct: 230 NVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAF 289

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C +S +  A   F K       P++  Y+++I+GLC+ G    A  L EEM   NG    
Sbjct: 290 CEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK-NG---- 344

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNE 306
             KPN  T+ ++I GLCK+G+ ++A  LFLK+ + +N  P+V TYT++I G+C     + 
Sbjct: 345 -WKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 403

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ LF  M +QG+ P+  T++ ++D  CK G   KA  L+ELM   G  PNT TYN+++D
Sbjct: 404 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 463

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C   + + A KL  +   N    D V+Y  LI+  CK  D+ +AL   ++M   G +P
Sbjct: 464 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 523

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +  Y TL       + ++ + KLFDE+ +  +A    TY + I G C+   V  A++ F
Sbjct: 524 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 583

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
           + + D     + +SY  LI GL
Sbjct: 584 QKMSDHGCAPDSISYGALISGL 605



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 201/414 (48%), Gaps = 11/414 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F  + +M  SP  ++  +++ G L K         L + +   G  P++YTH+ 
Sbjct: 296 NRAVWFFHKVTKMGLSPNLINYSSMISG-LCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK G     F +  +++RS  + PN  T+T++I G C E ++  A  LF + +  
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+  TY TLI+G C+ G+   A  L E M+N  G F     PNT TYN+I+DGLCK 
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN-EGFF-----PNTCTYNSIVDGLCKR 468

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  ++A +L        I  D VTYT +I   C   D N+A     +M   G QPD+  +
Sbjct: 469 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 528

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++   C+   M  + +L + +I  G+ P   TY ++I GYC   K+  A K F  M  
Sbjct: 529 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD 588

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +GC  D +SY  LI+  CK   ++EA  LY  M+ KG+ P  VT  TL     +      
Sbjct: 589 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 648

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           A+ + + + +       +T    I  LC    V  A   F  + D +  ++ V+
Sbjct: 649 AMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKEVNVDRVT 699



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 184/355 (51%), Gaps = 5/355 (1%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G   D  T +++I  FC+   V+       ++ +   +PN + ++S+I GLC    + +A
Sbjct: 274 GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 333

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L  +      +P+V+T+ +LI+GLC+ G T  A  LF ++   +       KPN  TY
Sbjct: 334 FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY-----KPNVHTY 388

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
             +I G CKE  + +A+ LF +MK++ + P+  TYT++I G C A ++++A  L   M +
Sbjct: 389 TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSN 448

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G  P+  T++ I+D LCK G+ ++A +LL       +  +  TY  LI   C    ++ 
Sbjct: 449 EGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQ 508

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A      M   G   D+  Y TLI  +C+   ++++  L+ E++  G+ PT  TY ++  
Sbjct: 509 ALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMIC 568

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           G     +V  A+K F +M  +  A D+ +Y   I GLCK   + EA +L+  + D
Sbjct: 569 GYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMID 623



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 16/307 (5%)

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
           H V  C   VF            G    A+++  +M N     G+V    T   N II  
Sbjct: 174 HEVVECMVGVFA---------EIGKLKEAVDMILDMRNQ----GLVL--TTRVMNRIILV 218

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             +   V+ A  +F +M    + PD  TY  +I G+C   +  EA R   EMM++G   D
Sbjct: 219 AAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVD 278

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             T ++I+   C+   +++A      +   G++PN   Y+++I G C    +  A +L  
Sbjct: 279 NATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLE 338

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEI 441
            M  NG   +V ++ +LI+  CK    E A  L+ +++ S   KP V TY  +  G  + 
Sbjct: 339 EMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKE 398

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++ RA  LF+ M+   +  +T TY   IDG CK+G   +A EL   + +  +  N  +Y
Sbjct: 399 EKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTY 458

Query: 502 NCLIDGL 508
           N ++DGL
Sbjct: 459 NSIVDGL 465


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 194/408 (47%), Gaps = 22/408 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    L K +   G  PD  T+S +I   C   +V   F++   +     TP
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A  LF + R   C P V TY  LI+   +      A ++F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---------------- 279
             M +        C+PN VTY  ++DGLCK G + KA E++ K+                
Sbjct: 382 HRMVDAG------CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + P+VVTY +++ G C A+  + A  L   M+  G +P+ + +  ++D  CK GK+
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P+ +TY +LID      ++D A K+   M  + C  +VV+Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C+  + E+AL L S M  KG  P VVTY  L  GL +  +++ +L LF +M R   
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + +  TY   I+ LC +G + +A  L   ++ + +   +  Y C I G
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663



 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 213/427 (49%), Gaps = 28/427 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDT--VLSLFKRLNSAGLFPDIYTHSI----LINCFCKMGR 157
           PP    +NI  G +   +   +  +L L +++    L  +   + +       C C +G+
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
               F ++  ++R  F P+  T++ +I  LC  +++ +A  LF + ++    PDV+TY  
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+  C+ G    A  LFEEM +      V C P  VTY  +I    K   V +A ++F 
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG----------------VQP 321
           +M D    P+ VTY +++ G C A + ++A  ++ +++                   + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT+  ++D LCK  K+D A  LL+ M+  G  PN   Y+ LIDG+C   KID A+++F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M   G +  V +Y +LI+   K+  ++ A+ + S+ML     P VVTY  +  GL  I
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            + E+ALKL   M     + +  TY   IDGL K+G +  +L+LF  +       N V+Y
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 502 NCLIDGL 508
             LI+ L
Sbjct: 623 RVLINHL 629



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 198/399 (49%), Gaps = 14/399 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ +   L      +    LF+ +   G+ PD+YT++ILI+ FCK G +     +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P  VT+T+LI       ++ +A  +F +     C P+  TY  L++GLC+
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 225 TGHTIVALNLFEEMA----NGNGEFGVVCK------PNTVTYNTIIDGLCKEGFVDKAKE 274
            G+   A  ++ ++     + + +F   C+      PN VTY  ++DGLCK   VD A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M      P+ + Y ++I GFC A   + A+ +F++M   G  P V T++ ++D + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K+G++D A ++L  M+     PN  TY  +IDG C   + + A KL   ME  GC  +VV
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  LI+   K   ++ +L L+++M  KG  P  VTY  L   L     +++A  L  EM
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 455 RRNHVAADTYTYNNFIDGLCKSGF----VLEALELFRAI 489
           ++ +       Y   I G  KS      +LE +E +  +
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTV 684



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 211/472 (44%), Gaps = 58/472 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F  M +M    P V ++ IL     K    +    LF+ + S G  P + T++ 
Sbjct: 305 EKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           LI+ + K  +V     +  R++ +   PN VT+ +L+ GLC    I +A  ++ K     
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 203 -----HRVFACE------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
                   F CE      P+V TY  L++GLC+      A  L + M +        C+P
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG------CEP 477

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N + Y+ +IDG CK G +D A+E+FL+M      P V TYTS+I         + A ++ 
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 537

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            +M+     P+VVT++ ++D LC+ G+ +KA +LL LM  +G +PN  TY  LIDG    
Sbjct: 538 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 597

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA------------------- 412
            KID +  LF  M   GC  + V+Y  LIN  C    +++A                   
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 413 --------------LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR-- 456
                         L +  EM S G  P    Y  L     +  ++E A++L  EM    
Sbjct: 658 RCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP 717

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + V  D   Y + I  LC +  V EA  L+  +    +   +  + CLI GL
Sbjct: 718 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 209/472 (44%), Gaps = 63/472 (13%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F + +R +   P V ++  L     K K       +   + + G  P+    + L++ +C
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 188

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA------ 207
                ++ + +L R+      P  V +   I  +C + ++     L    +++       
Sbjct: 189 NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN 248

Query: 208 ---------------CE--------------------PDVFTYNTLINGLCRTGHTIVAL 232
                          C                     PD  TY+ +I  LC       A 
Sbjct: 249 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 308

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            LF+EM        V   P+  TY  +ID  CK G +++A+ LF +M+    +P VVTYT
Sbjct: 309 LLFQEMKM------VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I  +  A    +A  +F  M+D G +P+ VT+  ++D LCK G + KA  +   +I  
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 353 G----------------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
                            + PN  TY  L+DG C   K+DHA +L  +M S+GC  + + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           + LI+ +CK   ++ A  ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    +  TY   IDGLC+ G   +AL+L   + +     N+V+Y  LIDGL
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 181/407 (44%), Gaps = 18/407 (4%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +  ++D  +S   R+      P++ T+  L++ F K  ++     ++  ++     PN
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
              F SL+   C E     A  L  +     C P    YN  I  +C     + + +L +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLD 235

Query: 237 EMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                 GE     C  N V        LC  G  DKA +L  +M  +   PD  TY+ VI
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
              C+A    +A  LF EM   GV PDV T+++++D  CK G +++A  L E M   G +
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P   TY  LI  Y    ++  A  +F  M   GC  + V+Y  L++  CK  ++ +A  +
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 416 YSEMLSKG----------------IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           Y++++                   + P VVTY  L  GL + H+V+ A +L D M  +  
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +   Y+  IDG CK+G +  A E+F  +    Y  ++ +Y  LID
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 201/454 (44%), Gaps = 54/454 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L+     D    + K ++ +G   D +T     +  CK GR +     
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 94

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I R  F  + V  T +I GL   S   EA +   + R  +C P+V TY TL++G  +
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 225 TGH-----TIVAL----------NLFEEMANG--------------NGEFGVVCKPNTVT 255
                    I+ +          +LF  + +               N      C P  V 
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 256 YNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           YN  I  +C +        +D A++++ +M   N   + V   +  R  C    +++A +
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EMM +G  PD  T+S ++  LC   K++KA  L + M   GV P+ YTY  LID +C
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I+ A+ LF  M S GC   VV+Y  LI+ Y K K V +A  ++  M+  G +P  V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM----------------RRNHVAADTYTYNNFIDGL 473
           TY  L  GL +   + +A +++ ++                 R+ +A +  TY   +DGL
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK+  V  A EL  A+  S  E N + Y+ LIDG
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 203/453 (44%), Gaps = 58/453 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F+ M R     P V ++  L     K K       +F R+  AG  P+  T+  
Sbjct: 340 EQAQWLFEEM-RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 148 LINCFCKMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAES 191
           L++  CK G +S  F V  +++                R    PN VT+ +L+ GLC   
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           ++  A  L        CEP+   Y+ LI+G C+ G    A  +F +M     + G +  P
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT----KCGYL--P 512

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           +  TY ++ID + K+G +D A ++  +M  ++  P+VVTYT++I G C   +  +A +L 
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M ++G  P+VVT++ ++D L K GK+D +  L   M  +G +PN  TY  LI+  C  
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632

Query: 372 DKIDHARKLFVSME------------------------SNGCMHDVVSYNT--------- 398
             +D AR L   M+                        S G + ++ SY T         
Sbjct: 633 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGM 692

Query: 399 LINWYCKNKDVEEALSLYSEMLS--KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           LI+ + K   +E A+ L+ EM+     +K     Y +L   L    QVE A +L+ EM R
Sbjct: 693 LIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTR 752

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                +   +   I GL +     EAL+L   I
Sbjct: 753 RGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 785



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 135/341 (39%), Gaps = 50/341 (14%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F   P   TYN L+  L   G   +   + +EM+         C  +  T       LCK
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG-----FCM-DRFTVGCFAHALCK 87

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG    A ++   ++ E+   D V  T +I G   A+ ++EA      M      P+VVT
Sbjct: 88  EGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +  ++    K  ++    R++ +M+  G NPN   +N+L+  YC      +A KL   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 386 SNGCMHDVVSYNTLINWYCKNKDV------------------------------------ 409
           + GC    V YN  I   C  + +                                    
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 410 -----EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
                ++A  L  EM+ KG  P   TY+ +   L    +VE+A  LF EM+   V  D Y
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY   ID  CK+G + +A  LF  +R       +V+Y  LI
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 109/302 (36%), Gaps = 75/302 (24%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           +KD    P  VTY ++++    A   +   R+  EM + G   D  T       LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 339 --------------------------------MDKASRLLELMIWRGVNPNTYTYNTLID 366
                                            D+A   L  M      PN  TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+    ++   +++   M + GC  +   +N+L++ YC  KD   A  L + M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 427 TVVTYNTLFLG------------------------------------------LFEIHQV 444
             V YN +F+G                                          L  + + 
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A +L  EM R     DT TY+  I  LC +  V +A  LF+ ++      ++ +Y  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 505 ID 506
           ID
Sbjct: 330 ID 331


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 185/343 (53%), Gaps = 11/343 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R     P V +FN L   + + +  D V  L+K ++  G+ PD+YT+  LI  F
Sbjct: 208 VFDEMRRS--VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGF 265

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ GR+ +   +   +  +   PNAV FT+LI   C E  +     L+   RV    PD+
Sbjct: 266 CRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDL 325

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN L+NGLCR  +   A ++ EEM N         KP+ VTY T+IDG CK+G +D A
Sbjct: 326 VAYNALVNGLCRARNLKAAESIVEEMKNAG------LKPDKVTYTTLIDGCCKDGKLDMA 379

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++  KM ++ ++ D VTYT++I G   A    +A+R+  EMM+  ++PD  T+++++D 
Sbjct: 380 MDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDA 439

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+ G +    +LL+ M  +G  P   TYN +++G C   ++ +A  L  +M + G   D
Sbjct: 440 FCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPD 499

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            ++YN L++  CK+  V  +  L S   SKG+ P    Y +L 
Sbjct: 500 DITYNILLDGQCKHGKVANSEELES---SKGMVPDFAVYTSLI 539



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 194/382 (50%), Gaps = 12/382 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P PV S     G +++        + + +L  AG+ P+    ++L+  F ++G +     
Sbjct: 153 PAPVCS-----GLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARK 207

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V   + RS   P  VTF +LI G+C    +     L+ +      +PDV+TY  LI G C
Sbjct: 208 VFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFC 266

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           RTG    A+ +F EM     + GV   PN V + T+ID  CKEG V+   +L+  M+   
Sbjct: 267 RTGRMENAVKMFNEMR----DTGV--NPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD+V Y +++ G C A +   A+ +  EM + G++PD VT++ ++D  CK+GK+D A 
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            + + M  + V+ +  TY  LI G     +   A ++   M       D  +Y  +I+ +
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+  DV+    L  EM +KG KP VVTYN +  GL ++ Q++ A  L   M    V+ D 
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500

Query: 464 YTYNNFIDGLCKSGFVLEALEL 485
            TYN  +DG CK G V  + EL
Sbjct: 501 ITYNILLDGQCKHGKVANSEEL 522



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 175/374 (46%), Gaps = 33/374 (8%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF--TSLIKGLCAESRIM 194
           GL PD  +   L+    + G      V  G + R   TP A TF    L  G+  E+R+ 
Sbjct: 133 GLLPDACS---LVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETRL- 188

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
                               +N L+    R G  + A  +F+EM           +P  V
Sbjct: 189 --------------------FNVLMRDFVRLGELVSARKVFDEMRRS-------VQPTVV 221

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T+NT+I G+C+   +D    L+ +M D  + PDV TY ++I+GFC       A ++F EM
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM 281

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            D GV P+ V F+ ++D  CK G ++    L + M  RGV P+   YN L++G C    +
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  +   M++ G   D V+Y TLI+  CK+  ++ A+ +  +M  K +    VTY  L
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  +   A ++  EM    +  D  TY   ID  C+ G V    +L + +++   
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461

Query: 495 ELNIVSYNCLIDGL 508
           +  +V+YN +++GL
Sbjct: 462 KPGVVTYNVIMNGL 475


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 204/381 (53%), Gaps = 7/381 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF+ +   G+ PD  ++ +++  +CK+G +      L  +L   F  +  TFT +I    
Sbjct: 192 LFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFS 251

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +     A   F +      EP++  +  +I GLC+ G    A  + EEM  G G     
Sbjct: 252 GKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV-GKG----- 305

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEA 307
            KPN  T+ ++IDGLCK+G+ +KA  LFLK+ + EN  P+V+TYT++I G+C  +  N A
Sbjct: 306 WKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           + L   M +QG+ P+  T++ ++D  CK G  ++A  L+ LM   G +PN  TYN +++G
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   ++  A K+      NG   D  +YN L++ +CK +++ +AL+L+++ML  GI+P 
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           + +Y TL       ++++ +   F+E  R  +     TY + I G C+ G +  A++ F 
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + D     + ++Y  +I GL
Sbjct: 546 RLSDHGCAPDSITYGAIISGL 566



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 8/346 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL  F  ++ M   P  ++ F  +   L K         + + +   G  P++YTH+ LI
Sbjct: 259 ALWYFRRLVDMGLEPNLIN-FTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLI 317

Query: 150 NCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  CK G     F +  +++RS    PN +T+T++I G C E ++  A  L ++ +    
Sbjct: 318 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 377

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY TLI+G C+ G+   A +L   M++          PN  TYN I++GLCK G 
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG------FSPNLCTYNAIVNGLCKRGR 431

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A ++        + PD  TY  ++   C   +  +A  LF +M+  G+QPD+ +++ 
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTT 491

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+  +M ++    E  +  G+ P   TY ++I GYC    +  A K F  +  +G
Sbjct: 492 LIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG 551

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           C  D ++Y  +I+  CK    +EA SLY  M+ KG+ P  VT  TL
Sbjct: 552 CAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 6/281 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  ++R     P V ++  +     +    +    L  R+   GL P+  T++ L
Sbjct: 328 KAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTL 387

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G     + ++  +    F+PN  T+ +++ GLC   R+ EA  +         
Sbjct: 388 IDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGL 447

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PD FTYN L++  C+  +   AL LF +M     + G+  +P+  +Y T+I   C+E  
Sbjct: 448 KPDKFTYNILMSEHCKQENIRQALALFNKML----KIGI--QPDIHSYTTLIAVFCRENR 501

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +++  F +     I P   TYTS+I G+C   +   A + F  + D G  PD +T+  
Sbjct: 502 MKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           I+  LCK  K D+A  L + MI +G+ P   T  TL   YC
Sbjct: 562 IISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYC 602



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 201/488 (41%), Gaps = 90/488 (18%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           ++LC +    ++ P    +        C + N+H    +S  +RL+  G+  D  TH   
Sbjct: 25  KSLCYYSSSTQLQPISQTMVQRVCSLVCESYNQHAHMRVS-SQRLH-FGIEVDFLTHEQA 82

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++    +   +   V L     +   P    F  L   +CA S I        ++   AC
Sbjct: 83  VSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLYI-VCAMSLIG------NRNSEKAC 135

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           E        ++      G    A+ +  EM N     G+V  PNT T N II    + G 
Sbjct: 136 E----VMRCMVESFSEVGRLKEAVEMVIEMHNQ----GLV--PNTRTLNWIIKVTSEMGL 185

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCY------ANDW------------------ 304
           V+ A+ LF +M    + PD ++Y  ++  +C       A+ W                  
Sbjct: 186 VEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTL 245

Query: 305 -----------NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
                        A   F  ++D G++P+++ F+ +++ LCK G + +A  +LE M+ +G
Sbjct: 246 IISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKG 305

Query: 354 VNPNTYTYNTLID------------------------------------GYCLTDKIDHA 377
             PN YT+ +LID                                    GYC  DK++ A
Sbjct: 306 WKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             L   M+  G + +  +Y TLI+ +CK  + E A  L + M S+G  P + TYN +  G
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  +V+ A K+ ++  +N +  D +TYN  +   CK   + +AL LF  +     + +
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 498 IVSYNCLI 505
           I SY  LI
Sbjct: 486 IHSYTTLI 493



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 1/215 (0%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++  F       EA  + IEM +QG+ P+  T + I+    + G ++ A  L E M  RG
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V P++ +Y  ++  YC    I  A K    M   G + D  ++  +I+ +        AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             +  ++  G++P ++ +  +  GL +   +++A ++ +EM       + YT+ + IDGL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 474 CKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDG 507
           CK G+  +A  LF + +R   ++ N+++Y  +I G
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISG 355


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 13/381 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKM 155
           +LR  P P  V+ +N +             L + + +    G+ P+ YT+  +I+ +CK+
Sbjct: 510 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 156 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDV 212
           GRV     V   +L +    P AV + +LI G C + ++    AL  + R+        V
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL--DTALLYRDRMVERGVAMTV 626

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN L++ L   G    A  L EEM  G G       P+  TYN +I+G CKEG V KA
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKA 680

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+F  M    +   VVTYT++I          E  +LF E + +G++PD+V ++ +++ 
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 740

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              +G +D+A  ++  M  + + P+  TYNTL+ G CL  ++D ARKL   M   G   D
Sbjct: 741 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+YNTLI+ Y    DV++AL + +EM++KG  PT++TYN L  GL +  Q + A  +  
Sbjct: 801 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 860

Query: 453 EMRRNHVAADTYTYNNFIDGL 473
           EM  N +  D  TY + I+GL
Sbjct: 861 EMVENGITPDDSTYISLIEGL 881



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 198/435 (45%), Gaps = 41/435 (9%)

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----------------------GLFPDIY 143
           P S  N+L    A  + + T L L+ R+ S                        LF D++
Sbjct: 421 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMF 480

Query: 144 ---------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
                    T +I++   C  G+ +        +LR    PNAVT+ ++I G C+  R+ 
Sbjct: 481 RLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQ 536

Query: 195 EAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            A  +  + R      P+ +TY T+I+G C+ G    A+ +F+EM    GE     KP  
Sbjct: 537 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEV----KPEA 591

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V YN +I G C +G +D A     +M +  +   V TY  ++          EA  L  E
Sbjct: 592 VMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 651

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G+ PDV T++++++  CK G + KA  + E M  RGV     TY  LI       +
Sbjct: 652 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 711

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +    KLF      G   D+V YN LIN +  + +++ A  +  EM  K I P  VTYNT
Sbjct: 712 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 771

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  GL  + +V+ A KL DEM    +  D  TYN  I G    G V +AL +   + +  
Sbjct: 772 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831

Query: 494 YELNIVSYNCLIDGL 508
           +   +++YN LI GL
Sbjct: 832 FNPTLLTYNALIQGL 846



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 204/424 (48%), Gaps = 19/424 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M R+   P   ++FNI+   L         L L +++      P+  T++ +I
Sbjct: 472 AFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 526

Query: 150 NCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALF----TKHR 204
             FC  GRV     ++  +  R    PN  T+ ++I G C   R+ EA  +F    TK  
Sbjct: 527 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 586

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           V   +P+   YN LI G C  G    AL   + M     E GV       TYN ++  L 
Sbjct: 587 V---KPEAVMYNALIGGYCDQGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALF 637

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G   +A EL  +M  + + PDV TY  +I G C   +  +A  +F  M  +GV+  VV
Sbjct: 638 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 697

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++  L K G++ +  +L +  + RG+ P+   YN LI+ +  +  ID A ++   M
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E      D V+YNTL+   C    V+EA  L  EM  +GI+P +VTYNTL  G      V
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL++ +EM          TYN  I GLCK+G   +A  + + + ++    +  +Y  L
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877

Query: 505 IDGL 508
           I+GL
Sbjct: 878 IEGL 881



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 8/274 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+L   L  +        L + +   GL PD++T++ILIN  CK G V     +  
Sbjct: 626 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 685

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R       VT+T+LI  L  + ++ E   LF +       PD+  YN LIN    +G
Sbjct: 686 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 745

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  +  EM            P+ VTYNT++ GLC  G VD+A++L  +M +  I P
Sbjct: 746 NIDRAFEIMGEMEKKR------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 799

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY ++I G+    D  +A R+  EMM++G  P ++T++ ++  LCKNG+ D A  ++
Sbjct: 800 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 859

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDK--IDHAR 378
           + M+  G+ P+  TY +LI+G    D+  ID  R
Sbjct: 860 KEMVENGITPDDSTYISLIEGLTTEDERAIDDER 893


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 194/409 (47%), Gaps = 22/409 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    L K +   G  PD  T+S +I   C   +V   F++   +     TP
Sbjct: 262 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 321

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A  LF + R   C P V TY  LI+   +      A ++F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---------------- 279
             M +        C+PN VTY  ++DGLCK G + KA E++ K+                
Sbjct: 382 HRMVDAG------CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + P+VVTY +++ G C A+  + A  L   M+  G +P+ + +  ++D  CK GK+
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P+ +TY +LID      ++D A K+   M  + C  +VV+Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C+  + E+AL L S M  KG  P VVTY  L  GL +  +++ +L LF +M R   
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  TY   I+ LC +G + +A  L   ++ + +   +  Y C I G 
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 213/427 (49%), Gaps = 28/427 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDT--VLSLFKRLNSAGLFPDIYTHSI----LINCFCKMGR 157
           PP    +NI  G +   +   +  +L L +++    L  +   + +       C C +G+
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
               F ++  ++R  F P+  T++ +I  LC  +++ +A  LF + ++    PDV+TY  
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+  C+ G    A  LFEEM +      V C P  VTY  +I    K   V +A ++F 
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD----------------QGVQP 321
           +M D    P+ VTY +++ G C A + ++A  ++ +++                   + P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT+  ++D LCK  K+D A  LL+ M+  G  PN   Y+ LIDG+C   KID A+++F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M   G +  V +Y +LI+   K+  ++ A+ + S+ML     P VVTY  +  GL  I
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            + E+ALKL   M     + +  TY   IDGL K+G +  +L+LF  +       N V+Y
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 502 NCLIDGL 508
             LI+ L
Sbjct: 623 RVLINHL 629



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 198/399 (49%), Gaps = 14/399 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ +   L      +    LF+ +   G+ PD+YT++ILI+ FCK G +     +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P  VT+T+LI       ++ +A  +F +     C P+  TY  L++GLC+
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 225 TGHTIVALNLFEEMA----NGNGEFGVVCK------PNTVTYNTIIDGLCKEGFVDKAKE 274
            G+   A  ++ ++     + + +F   C+      PN VTY  ++DGLCK   VD A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M      P+ + Y ++I GFC A   + A+ +F++M   G  P V T++ ++D + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K+G++D A ++L  M+     PN  TY  +IDG C   + + A KL   ME  GC  +VV
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  LI+   K   ++ +L L+++M  KG  P  VTY  L   L     +++A  L  EM
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 455 RRNHVAADTYTYNNFIDGLCKSGF----VLEALELFRAI 489
           ++ +       Y   I G  KS      +LE +E +  +
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTV 684



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 211/472 (44%), Gaps = 58/472 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F  M +M    P V ++ IL     K    +    LF+ + S G  P + T++ 
Sbjct: 305 EKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           LI+ + K  +V     +  R++ +   PN VT+ +L+ GLC    I +A  ++ K     
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 203 -----HRVFACE------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
                   F CE      P+V TY  L++GLC+      A  L + M +        C+P
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG------CEP 477

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N + Y+ +IDG CK G +D A+E+FL+M      P V TYTS+I         + A ++ 
Sbjct: 478 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 537

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            +M+     P+VVT++ ++D LC+ G+ +KA +LL LM  +G +PN  TY  LIDG    
Sbjct: 538 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 597

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA------------------- 412
            KID +  LF  M   GC  + V+Y  LIN  C    +++A                   
Sbjct: 598 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 413 --------------LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR-- 456
                         L +  EM S G  P    Y  L     +  ++E A++L  EM    
Sbjct: 658 RCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP 717

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + V  D   Y + I  LC +  V EA  L+  +    +   +  + CLI GL
Sbjct: 718 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 769



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 209/472 (44%), Gaps = 63/472 (13%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F + +R +   P V ++  L     K K       +   + + G  P+    + L++ +C
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 188

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA------ 207
                ++ + +L R+      P  V +   I  +C + ++     L    +++       
Sbjct: 189 NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN 248

Query: 208 ---------------CE--------------------PDVFTYNTLINGLCRTGHTIVAL 232
                          C                     PD  TY+ +I  LC       A 
Sbjct: 249 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 308

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            LF+EM        V   P+  TY  +ID  CK G +++A+ LF +M+    +P VVTYT
Sbjct: 309 LLFQEMKM------VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I  +  A    +A  +F  M+D G +P+ VT+  ++D LCK G + KA  +   +I  
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 353 G----------------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
                            + PN  TY  L+DG C   K+DHA +L  +M S+GC  + + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           + LI+ +CK   ++ A  ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    +  TY   IDGLC+ G   +AL+L   + +     N+V+Y  LIDGL
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 181/407 (44%), Gaps = 18/407 (4%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +  ++D  +S   R+      P++ T+  L++ F K  ++     ++  ++     PN
Sbjct: 117 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 176

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
              F SL+   C E     A  L  +     C P    YN  I  +C     + + +L +
Sbjct: 177 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLD 235

Query: 237 EMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                 GE     C  N V        LC  G  DKA +L  +M  +   PD  TY+ VI
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
              C+A    +A  LF EM   GV PDV T+++++D  CK G +++A  L E M   G +
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P   TY  LI  Y    ++  A  +F  M   GC  + V+Y  L++  CK  ++ +A  +
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 416 YSEMLSKG----------------IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           Y++++                   + P VVTY  L  GL + H+V+ A +L D M  +  
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +   Y+  IDG CK+G +  A E+F  +    Y  ++ +Y  LID
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 522



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 201/455 (44%), Gaps = 54/455 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L+     D    + K ++ +G   D +T     +  CK GR +     
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 94

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I R  F  + V  T +I GL   S   EA +   + R  +C P+V TY TL++G  +
Sbjct: 95  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 225 TGH-----TIVAL----------NLFEEMANG--------------NGEFGVVCKPNTVT 255
                    I+ +          +LF  + +               N      C P  V 
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 256 YNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           YN  I  +C +        +D A++++ +M   N   + V   +  R  C    +++A +
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EMM +G  PD  T+S ++  LC   K++KA  L + M   GV P+ YTY  LID +C
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I+ A+ LF  M S GC   VV+Y  LI+ Y K K V +A  ++  M+  G +P  V
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM----------------RRNHVAADTYTYNNFIDGL 473
           TY  L  GL +   + +A +++ ++                 R+ +A +  TY   +DGL
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK+  V  A EL  A+  S  E N + Y+ LIDG 
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 206/455 (45%), Gaps = 62/455 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F+ M R     P V ++  L     K K       +F R+  AG  P+  T+  
Sbjct: 340 EQAQWLFEEM-RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 148 LINCFCKMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAES 191
           L++  CK G +S  F V  +++                R    PN VT+ +L+ GLC   
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           ++  A  L        CEP+   Y+ LI+G C+ G    A  +F +M     + G +  P
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT----KCGYL--P 512

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           +  TY ++ID + K+G +D A ++  +M  ++  P+VVTYT++I G C   +  +A +L 
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M ++G  P+VVT++ ++D L K GK+D +  L   M  +G +PN  TY  LI+  C  
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632

Query: 372 DKIDHARKLFVSME------------------------SNGCMHDVVSYNT--------- 398
             +D AR L   M+                        S G + ++ SY T         
Sbjct: 633 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGM 692

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI----HQVERALKLFDEM 454
           LI+ + K   +E A+ L+ EM+   +  +V T N ++  L +      QVE A +L+ EM
Sbjct: 693 LIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 750

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            R     +   +   I GL +     EAL+L   I
Sbjct: 751 TRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 785



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 135/341 (39%), Gaps = 50/341 (14%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F   P   TYN L+  L   G   +   + +EM+         C  +  T       LCK
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG-----FCM-DRFTVGCFAHALCK 87

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG    A ++   ++ E+   D V  T +I G   A+ ++EA      M      P+VVT
Sbjct: 88  EGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +  ++    K  ++    R++ +M+  G NPN   +N+L+  YC      +A KL   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 386 SNGCMHDVVSYNTLINWYCKNKDV------------------------------------ 409
           + GC    V YN  I   C  + +                                    
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 410 -----EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
                ++A  L  EM+ KG  P   TY+ +   L    +VE+A  LF EM+   V  D Y
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY   ID  CK+G + +A  LF  +R       +V+Y  LI
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 41/286 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   + K+   D  + +  ++      P++ T++ +I+  C++G       +
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     +PN VT+T+LI GL    +I  +  LFT+     C P+  TY  LIN LC 
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631

Query: 225 TG---------------------------------HTIVALNLFEEMANGNGEFGVVCKP 251
            G                                   I +L + EEM +    +G V  P
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES----YGTV--P 685

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKD--ENINPDVVTYTSVIRGFCYANDWNEAKR 309
               Y  +ID   K G ++ A EL  +M +   ++  D   Y S+I+  C A+   EA R
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           L+ EM  +G  P++  F  ++  L +  K D+A +L   +   GVN
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 791



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 109/302 (36%), Gaps = 75/302 (24%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           +KD    P  VTY ++++    A   +   R+  EM + G   D  T       LCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 339 --------------------------------MDKASRLLELMIWRGVNPNTYTYNTLID 366
                                            D+A   L  M      PN  TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+    ++   +++   M + GC  +   +N+L++ YC  KD   A  L + M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 427 TVVTYNTLFLG------------------------------------------LFEIHQV 444
             V YN +F+G                                          L  + + 
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           ++A +L  EM R     DT TY+  I  LC +  V +A  LF+ ++      ++ +Y  L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 505 ID 506
           ID
Sbjct: 330 ID 331


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 195/378 (51%), Gaps = 7/378 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +LR  P P  V+   ++ G  A+ +    +  + +     G+ PD YT++ LI+ +CK+G
Sbjct: 138 LLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 157 RVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           R+     V   +L +    P+AV + +LI G C   ++  A               V TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N L++ L        A  + EEM   NG       P+  TYN +I+G CKEG   KA E+
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQK-NG-----FSPDVFTYNILINGYCKEGNEKKALEV 311

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M  + +    VTYTS+I  F       E  RLF   + +G++PDVV ++ +++  C 
Sbjct: 312 FEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCT 371

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G M++A  ++  M  + + P+  TYNTL+ G+CL  ++D AR L   M   G   D+VS
Sbjct: 372 GGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVS 431

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YNTLI+ Y    D+++AL +  EM+ KG  PT++TYN L  GL +I Q + A  L  EM 
Sbjct: 432 YNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMV 491

Query: 456 RNHVAADTYTYNNFIDGL 473
              +  D  TY + I+GL
Sbjct: 492 AKGITPDDSTYISLIEGL 509



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 204/456 (44%), Gaps = 44/456 (9%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-------- 136
           ++ + ALC    +  +  SP   S  ++L    A  + + T L L+ +L S         
Sbjct: 31  LSADRALCPLSVLPHLSASP---SLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPVAS 87

Query: 137 --------------GLFPDIY---------THSILINCFCKMGRVSHGFVVLGRILRSCF 173
                          LF DIY         T +I++   C  G+          +LR   
Sbjct: 88  LHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRAL----ELLRQMP 143

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVAL 232
            PNAVT+ ++I G CA  R+  A  +  + R      PD +TY TLI+G C+ G    A+
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +F+EM    GE      P+ V YN +I G C  G +D A +    M    I   V TY 
Sbjct: 204 KVFDEMLT-KGEVA----PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYN 258

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            ++         ++A  +  EM   G  PDV T++++++  CK G   KA  + E M  +
Sbjct: 259 LLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQK 318

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV     TY +LI  +    ++    +LF      G   DVV YN LIN +C   D+E A
Sbjct: 319 GVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERA 378

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             + +EM  K I P  +TYNTL  G   + +++ A  L DEM +  +  D  +YN  I G
Sbjct: 379 YEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISG 438

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               G + +AL +   + D  +   +++YN LI GL
Sbjct: 439 YSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGL 474



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 6/267 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+L   L  +       ++ + +   G  PD++T++ILIN +CK G       V  
Sbjct: 254 VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFE 313

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + +      AVT+TSLI     + ++ E   LF         PDV  YN LIN  C  G
Sbjct: 314 EMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGG 373

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +  EM            P+ +TYNT++ G C  G +D+A+ L  +M    I P
Sbjct: 374 DMERAYEIMAEMEKKR------IPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQP 427

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+V+Y ++I G+    D  +A R+  EMMD+G  P ++T++ ++  LCK  + D A  L+
Sbjct: 428 DLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLM 487

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           + M+ +G+ P+  TY +LI+G    D+
Sbjct: 488 KEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 1/107 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M +    P  VS +N L    +        L +   +   G  P + T++ 
Sbjct: 411 DEARTLIDEMTKRGIQPDLVS-YNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
           LI   CK+ +      ++  ++    TP+  T+ SLI+GL  E   M
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDERM 516


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 216/420 (51%), Gaps = 12/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +   M R    PP   S+N++   + +       + +F  +    + P+  T++ +
Sbjct: 178 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 237

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+   K G +  GF +  +++     PNA+T+  L+ GLC   R+ E +AL  +      
Sbjct: 238 IDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 297

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLF-EEMANGN--GEFGVVCKPNTVTYNTIIDGLCK 265
            PD FTY+ L +GL R G +   L+LF + + NG   G++         T + +++GLCK
Sbjct: 298 VPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY---------TCSILLNGLCK 348

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G V  A+E+   + +  + P  V Y ++I G+C   +   A   F +M  + ++PD +T
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 408

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ +++ LCK  ++  A  LL  M   GVNP   T+NTLID Y  T +++    +   M+
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            NG   +VVSY +++N +CKN  + EA+++  +M  K + P    YN +     E    +
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 528

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A  L ++M+ N ++    TYN  I GLC    + EA E+  ++ + +   + VSYN LI
Sbjct: 529 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 588



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ILF  L++N     +LSLF +    G+    YT SIL+N  CK G+VS    V
Sbjct: 299 PDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 358

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   P  V + +LI G C    +  A + F + +    +PD  TYN LINGLC+
Sbjct: 359 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 418

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L  EM + NG       P   T+NT+ID   + G ++K   +  +M++  +
Sbjct: 419 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 472

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y S++  FC      EA  +  +M  + V P+   ++ I+D   ++G  D+A  
Sbjct: 473 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 532

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+E M   G++P+  TYN LI G C   +I  A ++  S+ ++  + D VSYNTLI+  C
Sbjct: 533 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 592

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              ++++AL L   M   GIK TV TY+ L  GL    ++     L+ +M +N+V     
Sbjct: 593 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNA 652

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
            +N  ++   K G  ++A +L + +
Sbjct: 653 IHNIMVEAYSKYGNEIKAEDLRKEM 677



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 198/404 (49%), Gaps = 10/404 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P   ++N+L   L +        +L   + S  + PD +T+SIL +   + G    
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              + G+ L++  T    T + L+ GLC + ++  A  +          P    YNTLIN
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C+TG    A + F +M + +       KP+ +TYN +I+GLCK   +  A++L ++M+
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D  +NP V T+ ++I  +       +   +  EM + G++P+VV++  I++  CKNGK+ 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  +L+ M  + V PN   YN +ID Y      D A  L   M+SNG    +V+YN LI
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              C    + EA  + + + +  + P  V+YNTL         +++AL L   M +  + 
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           +   TY+  I GL  +G ++E   L++ +  +    N+V  N +
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQN----NVVPSNAI 653



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 203/425 (47%), Gaps = 14/425 (3%)

Query: 87  PNEALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           P+ AL +   +     +P P +SS N+L   L     +  V   F  L SAG  PD +  
Sbjct: 104 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 163

Query: 146 SILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           +  +      G +     +L R+ R     PNA ++  +I G+    R  +A  +F +  
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 223

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KPNTVTYNTIID 261
             A  P+  TYNT+I+G  + G      +L ++M         VC   KPN +TYN ++ 
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM---------VCHGLKPNAITYNVLLS 274

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC+ G + +   L  +M  + + PD  TY+ +  G     D      LF + +  GV  
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
              T S++++ LCK+GK+  A  +L+ ++  G+ P    YNTLI+GYC T +++ A   F
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M+S     D ++YN LIN  CK + +  A  L  EM   G+ PTV T+NTL       
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            Q+E+   +  EM+ N +  +  +Y + ++  CK+G + EA+ +   +       N   Y
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 502 NCLID 506
           N +ID
Sbjct: 515 NAIID 519



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 148/341 (43%), Gaps = 29/341 (8%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +IL   L K+        + + L +AGL P    ++ LIN +C+ G +   F   G++  
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+ +T+ +LI GLC   RI  A  L  + +     P V T+NTLI+   RTG    
Sbjct: 400 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459

Query: 231 ALNLFEEMANGNGEFGVV---------CK--------------------PNTVTYNTIID 261
              +  EM     +  VV         CK                    PN   YN IID
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
              + G  D+A  L  KMK   I+P +VTY  +I+G C  +  +EA+ +   + +  + P
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D V+++ ++   C  G +DKA  L + M   G+     TY+ LI G     ++     L+
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
             M  N  +     +N ++  Y K  +  +A  L  EML K
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 6/248 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L     +    +    +   +   GL P++ ++  ++N FCK G++     +
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 498

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNA  + ++I          +A  L  K +     P + TYN LI GLC 
Sbjct: 499 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 558

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +   ++N          P+ V+YNT+I   C  G +DKA +L  +M    I
Sbjct: 559 QSQISEAEEIINSLSNHR------LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              V TY  +I G   A    E + L+ +MM   V P     +++++   K G   KA  
Sbjct: 613 KSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 672

Query: 345 LLELMIWR 352
           L + M+ +
Sbjct: 673 LRKEMLQK 680



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 63/152 (41%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           PN+   I    ++ +   P + ++N+L   L           +   L++  L PD  +++
Sbjct: 526 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 585

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  C  G +     +  R+ +        T+  LI GL    R++E   L+ K    
Sbjct: 586 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQN 645

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
              P    +N ++    + G+ I A +L +EM
Sbjct: 646 NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 223/468 (47%), Gaps = 27/468 (5%)

Query: 43  PSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRM-- 100
           P  P   S L      +V+D  S    L   C+  G  D  L           ++LR+  
Sbjct: 63  PESPALLSSLP-----SVRDAVSYNTVLAALCRQGGCLDAAL-----------FLLRVMA 106

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H + P   S+  L   L   +     + L + + ++G+ PD+ T+  LI   C    V  
Sbjct: 107 HETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDK 166

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L  +  S   PN V ++ L++G C   R    + +F +      EPDV  Y  LI+
Sbjct: 167 AVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLID 226

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LCR G    A  + ++M     E G+  +PN VTYN +I+ +CKEG V +A  L   M 
Sbjct: 227 SLCREGKVKKATQVMDKMM----ERGL--EPNVVTYNVLINSMCKEGSVKEAMSLRNNML 280

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM--DQGVQPDVVTFSVIMDELCKNGK 338
           ++ +  D VTY ++I G     + +EA  L  EM+  +  V+P+VVTF+ ++  LCK G+
Sbjct: 281 EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGR 340

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           M +A ++ ++M   G   N  T+N LI G     K+  A +L   M S+G   D  +Y+ 
Sbjct: 341 MRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LIN +CK   V+ A SL S+M   GI+P +V Y  L   L E   +E+A   FDEM +N 
Sbjct: 401 LINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN- 459

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              D   Y+  I G C+      A E  + + D     + V+Y+ LI+
Sbjct: 460 CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLIN 507



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 188/371 (50%), Gaps = 45/371 (12%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +AV++ +++  LC +   ++AA    +       P   +Y TL+  LC    T  A+ L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 236 EEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +M A+G        +P+ VTY T+I GLC    VDKA EL  +M +  I P+VV Y+ +
Sbjct: 137 RDMQASG-------VRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCL 189

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           ++G+C A  W    ++F EM  +G++PDVV ++ ++D LC+ GK+ KA+++++ M+ RG+
Sbjct: 190 LQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGL 249

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  TYN LI+  C    +  A  L  +M   G   D V+YNTLI       +++EA+ 
Sbjct: 250 EPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMG 309

Query: 415 LYSEML--SKGIKPTVVTYNT-----------------------------------LFLG 437
           L  EM+     ++P VVT+N+                                   L  G
Sbjct: 310 LLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGG 369

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L  +H+V++A++L DEM  + +  D++TY+  I+G CK   V  A  L   +R    E  
Sbjct: 370 LLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429

Query: 498 IVSYNCLIDGL 508
           +V Y  L+  L
Sbjct: 430 LVHYIPLLAAL 440



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 200/408 (49%), Gaps = 15/408 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L     K   ++ V  +F+ ++  G+ PD+  ++ LI+  C+ G+V     V
Sbjct: 181 PNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQV 240

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + +++     PN VT+  LI  +C E  + EA +L           D  TYNTLI GL  
Sbjct: 241 MDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSG 300

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L EEM +G      + +PN VT+N++I GLCK G + +A ++   M +   
Sbjct: 301 VLEMDEAMGLLEEMIHGE----TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGC 356

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VT+  +I G    +   +A  L  EM   G++PD  T+S++++  CK  ++D+A  
Sbjct: 357 ACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAES 416

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M   G+ P    Y  L+   C    ++ AR  F  M  N C  DVV+Y+T+I+  C
Sbjct: 417 LLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGAC 475

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL---FLGLFEIHQVERALKLFDEMRRNHVAA 461
           + +D + A      ML +G+ P  VTY+ L   F    ++   ER LK   +M  +    
Sbjct: 476 RLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLK---QMTASGFVP 532

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAI--RDSKYELNIVS--YNCLI 505
           D   +++ I G    G   + LEL R +  +D   +  I+S  Y CL+
Sbjct: 533 DVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLV 580



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 183/409 (44%), Gaps = 45/409 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  L   L +         +  ++   GL P++ T+++LIN  CK G V     +
Sbjct: 216 PDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSL 275

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
              +L      +AVT+ +LI GL     + EA  L  +  H     EP+V T+N++I+GL
Sbjct: 276 RNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGL 335

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+TG    A  + + MA  NG     C  N VT+N +I GL +   V KA EL  +M   
Sbjct: 336 CKTGRMRQAFQVRDMMAE-NG-----CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PD  TY+ +I GFC     + A+ L  +M   G++P++V +  ++  LC+ G M++A
Sbjct: 390 GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA 449

Query: 343 ----------------------------------SRLLELMIWRGVNPNTYTYNTLIDGY 368
                                                L+ M+  G+ P++ TY+ LI+ +
Sbjct: 450 RNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             +  +  A ++   M ++G + DV  +++LI  Y    D E+ L L  EM +K I    
Sbjct: 510 ANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDS 569

Query: 429 VTYNTLFLGLF---EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
              +T++  L    E   + +++  FD          ++   N +  LC
Sbjct: 570 KIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLC 618



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 7/167 (4%)

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A+  L +++ RG    +   N L+    L +    +  L  S+ S   + D VSYNT++
Sbjct: 33  RAAPFLAVLLRRGRAEASARLNRLLRLVPLPE----SPALLSSLPS---VRDAVSYNTVL 85

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              C+     +A      +++   +PT V+Y TL   L    +  +A+ L  +M+ + V 
Sbjct: 86  AALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVR 145

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            D  TY   I GLC +  V +A+EL R + +S  E N+V Y+CL+ G
Sbjct: 146 PDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 225/451 (49%), Gaps = 18/451 (3%)

Query: 60  VKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLR-MHPSPPP-VSSFNILFGCL 117
           V+D  S    L   C+  G  D+      +AL +   M R  HP+  P   S+ ++   L
Sbjct: 73  VRDAVSYNIVLAALCRRGG--DLR-----QALSLLADMSREAHPAARPNAVSYTMVMRGL 125

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
             ++  D  ++L + + ++G+  D+ T+  LI   C    +     +LG +  S   PN 
Sbjct: 126 CASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNV 185

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           + ++ L++G C   R  + + +F +      EPDV  +   I+ LC+ G    A+ + + 
Sbjct: 186 IVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDI 245

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M     E      PN VTYN +I+ LCKEG V +A  L  +M D+ + PDVVTY ++I G
Sbjct: 246 MVQRGLE------PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAG 299

Query: 298 FCYANDWNEAKRLFIEMM--DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
                + + A  L  EM+  D  V+PDVVTF+ ++  LCK G+M +A  + E+M  RG  
Sbjct: 300 LSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCM 359

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            N  TYN LI G+    K++ A  L   + S+G   D  +Y+ LIN + K  +V+ A   
Sbjct: 360 CNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMF 419

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
              M  +GI+  +  Y  L   L ++  +E+A+ LF+EM  N    D   Y+  + G CK
Sbjct: 420 LRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACK 478

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           SG +  A +L + + D     + V+Y+ LI+
Sbjct: 479 SGDIKAAKQLLQDMLDEGLAPDAVTYSILIN 509



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 172/323 (53%), Gaps = 9/323 (2%)

Query: 191 SRIMEAAALFTKHRVFACEPDV---FTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFG 246
           +R + AA +     + +  PDV    +YN ++  LCR G  +  AL+L  +M+    E  
Sbjct: 52  NRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSR---EAH 108

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              +PN V+Y  ++ GLC     D+A  L   M+   +  DVVTY ++IRG C A + + 
Sbjct: 109 PAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDG 168

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  L  EM   GV P+V+ +S ++   C++G+    S++ E M   GV P+   +   ID
Sbjct: 169 ALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFID 228

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
             C   +I  A K+   M   G   +VV+YN LIN  CK   V EAL+L +EM  KG+ P
Sbjct: 229 DLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAP 288

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNH--VAADTYTYNNFIDGLCKSGFVLEALE 484
            VVTYNTL  GL  + +++ A+ L +EM +    V  D  T+N+ I GLCK G + +A+ 
Sbjct: 289 DVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAIS 348

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           +   + +     N+V+YN LI G
Sbjct: 349 VREMMAERGCMCNLVTYNYLIGG 371



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 195/389 (50%), Gaps = 11/389 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L     ++  +  V  +F+ ++  G+ PD+   +  I+  CK GR+     V
Sbjct: 183 PNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKV 242

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    PN VT+  LI  LC E  + EA AL  +       PDV TYNTLI GL  
Sbjct: 243 KDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSG 302

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L EEM  G+     + +P+ VT+N++I GLCK G + +A  +   M +   
Sbjct: 303 VLEMDGAMGLLEEMIQGD----TLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGC 358

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VTY  +I GF   +  N A  L  E++  G++PD  T+S++++   K  ++D+A  
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM 418

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M  RG+    + Y  L+   C    ++ A  LF  M+ N C  D V+Y+T++   C
Sbjct: 419 FLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGAC 477

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL---FLGLFEIHQVERALKLFDEMRRNHVAA 461
           K+ D++ A  L  +ML +G+ P  VTY+ L   F  L ++ + ER LK   +M  +    
Sbjct: 478 KSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLK---QMAASGFVP 534

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           D   +++ I G    G + + L+L   +R
Sbjct: 535 DVAVFDSLIKGYSAEGQINKILDLIHEMR 563



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 176/386 (45%), Gaps = 54/386 (13%)

Query: 45  YPTTTSKLKESLRLTVK-DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPS 103
           +   +   +E  RL V+ D      F+ + CK    G        +A+ + D M++    
Sbjct: 201 WQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG--------KAVKVKDIMVQ-RGL 251

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
            P V ++N+L  CL K       L+L   ++  G+ PD+ T++ LI     +  +     
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMG 311

Query: 164 VLGRILR--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           +L  +++  +   P+ VTF S+I GLC   R+ +A ++        C  ++ TYN LI G
Sbjct: 312 LLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGG 371

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG------------------- 262
             R     +A+NL  E+ +   E      P++ TY+ +I+G                   
Sbjct: 372 FLRVHKVNMAMNLMSELISSGLE------PDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425

Query: 263 ----------------LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                           LC+ G +++A  LF +M D N   D V Y++++ G C + D   
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKA 484

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK+L  +M+D+G+ PD VT+S++++   K G +++A R+L+ M   G  P+   +++LI 
Sbjct: 485 AKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHD 392
           GY    +I+    L   M +     D
Sbjct: 545 GYSAEGQINKILDLIHEMRAKNVAID 570



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 4/226 (1%)

Query: 287 DVVTYTSVIRGFCY-ANDWNEAKRLFIEMMDQG---VQPDVVTFSVIMDELCKNGKMDKA 342
           D V+Y  V+   C    D  +A  L  +M  +     +P+ V+++++M  LC + + D+A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             LL  M   GV  +  TY TLI G C   ++D A +L   M  +G   +V+ Y+ L+  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YC++   ++   ++ EM   G++P V+ +      L +  ++ +A+K+ D M +  +  +
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN  I+ LCK G V EAL L   + D     ++V+YN LI GL
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGL 300


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 203/404 (50%), Gaps = 12/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NIL    ++    D  L LFK L+S G  P+  T++ +I       R+      
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               L      + +++T++IKGL    RI EA  LF K +   C P+V  Y  +I+GL +
Sbjct: 357 FDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     L  FE+M+      G  C P   TY  +IDGLCK   +  A ++F +M  +  
Sbjct: 411 AGRIEDGLKNFEDMS------GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC 464

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TYT++I GF  A+  +EA++L   M+ +G +P  VT+  I+   CK   +++A  
Sbjct: 465 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKE 524

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++  M  RG  P  + + +L+  Y    + + A ++   M + GC  DV+ Y +LI+   
Sbjct: 525 VIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLF 584

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               V EA  ++  M+ KG  P  +TY T+     +I  VE A ++ + M ++ V  D +
Sbjct: 585 STGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCF 644

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN+ +DG  K   V +A  ++  +  S  + N V++N L+ GL
Sbjct: 645 AYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 195/399 (48%), Gaps = 12/399 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L     K    D  L L  ++     FPDI T++IL+  F +  R+     +   +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PNA T+T++I+GL    R+ EA A F +        DV +Y T+I GL  +   
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRI 379

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LFE++          C PN V Y  +IDGL K G ++   + F  M   +  P  
Sbjct: 380 DEACELFEKLKTAG------CSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTR 433

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT VI G C A    +A ++F +M+ +G  PD +T++ ++D   K  KMD+A +LL++
Sbjct: 434 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 493

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +G  P   TY +++ G+C  D I+ A+++   M   GC   +  + +L+++Y     
Sbjct: 494 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 553

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  + +EM ++G  P V+ Y +L   LF   +V  A  +FD M     A D  TY  
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I    K G V  A E+   +  S    +  +YN L+DG
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 652



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 207/417 (49%), Gaps = 15/417 (3%)

Query: 94  FDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
            D +  MH +   P V + NI+   L K +  D  + LF  + S G  P I +++ +I+ 
Sbjct: 5   LDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISG 64

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
              + ++   +     ++ +   P+ + FT+LI G C   +  +   +     +    PD
Sbjct: 65  LASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPD 123

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           VF Y ++I+G C+ G       + EEM          C P+   Y  +ID LCK G VD+
Sbjct: 124 VFLYTSVIHGYCKAGDLDTGFKILEEM------LAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ELF +M+      D VT+ ++I         +EA  L+ EM+++G +P +     ++ 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK GK+D+A+ + + ++ + V  +   YN+L+DGYC   ++D   KL + M       
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+ +YN L+  + +   +++AL L+  + S G KP   TY T+  GL++  ++E A   F
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           DE      A D  +Y   I GL  S  + EA ELF  ++ +    N+V+Y  +IDGL
Sbjct: 358 DE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGL 408



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 214/466 (45%), Gaps = 49/466 (10%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  +     EA   FD  L        V S+  +   LA +K  D    LF++L +AG 
Sbjct: 342 QGLYDAQRMEEAKAFFDEALD-------VISYTTVIKGLADSKRIDEACELFEKLKTAGC 394

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P++  ++ +I+   K GR+  G      +  S   P   T+T +I GLC    + +A  
Sbjct: 395 SPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 454

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +F +     C PD  TY TLI+G  +      A  L + M     E      P  VTY +
Sbjct: 455 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAVTYGS 508

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINP-------------------------------- 286
           I+ G CK   +++AKE+  +M++    P                                
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568

Query: 287 ---DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              DV+ YTS+I          EA+ +F  M+++G  PD +T+  I+    K G ++ A 
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +LELM   GV P+ + YN+L+DGY   +++D A  ++  M ++G   + V++N L++  
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 404 CKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            K+   + A SL+ EML K  + PT+V+Y  L  GL +  +V  A   F EM    +  +
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +TY + I  L K+G + EA +L   +       ++ +Y+ LI GL
Sbjct: 749 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 182/394 (46%), Gaps = 8/394 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F+ M++    P  ++ +  L    +K    D    L   + + G  P   T+  +
Sbjct: 451 DACKVFEQMVQKGCVPDTIT-YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 509

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ FCK+  ++    V+ ++      P    FTSL+    ++ R  EA  + T+     C
Sbjct: 510 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 569

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV  Y +LI+ L  TG    A ++F+ M          C P+ +TY TII    K G 
Sbjct: 570 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG------CAPDALTYGTIIQNFSKIGN 623

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A E+   M    + PD   Y S++ G+      ++A  ++  M+  G++P+ VTF+V
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683

Query: 329 IMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +M  L K+GK D+A  L + M+ +  V P   +Y  LIDG     ++  A   F  M   
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + +  +Y +LI    K   + EA  L  +M+  G+ P V  Y+ L  GL +   V+ A
Sbjct: 744 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
             +F EM +   A +  TY     G   +G  L+
Sbjct: 804 WDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 13/372 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D ML   P P  V+  +I+ G   K    +    +  ++   G  P ++  + 
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHG-FCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +   GR    + VL  +      P+ + +TSLI  L +  R+ EA  +F       
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD  TY T+I    + G+   A  + E MA           P+   YN+++DG  K  
Sbjct: 604 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG------VGPDCFAYNSLMDGYVKLE 657

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG-VQPDVVTF 326
            VD+A  ++ +M    I P+ VT+  ++ G       + A  LF EM+++  V P +V++
Sbjct: 658 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSY 717

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D L K G++ +A    + MI RG+ P  +TY +LI       +I  A+KL   M  
Sbjct: 718 TILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 777

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV +Y+ LI     +  V+ A  ++ EM+ +G  P  VTY  L  G        R
Sbjct: 778 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF---RAAGR 834

Query: 447 ALKLFDEMRRNH 458
           AL L  E  + H
Sbjct: 835 ALDL--EAVKQH 844



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA     EM   G+ PDVV  +++++ LCK  K+DKA  L   M   G  P   +YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I G    DK+D A K F SM  NGC  DV+++ TLI+ +CK    +    L ++ L K 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KR 119

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P V  Y ++  G  +   ++   K+ +EM       D   Y   ID LCK G V EA 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           ELF  +R S    + V++  LI+ L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEAL 204



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 1/237 (0%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A +   +M    + PDVV    V+ G C A   ++A  LF+EM   G +P +V+++ 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  L    KMD+A +    MI  G  P+   + TLI G+C   +      + ++     
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              DV  Y ++I+ YCK  D++    +  EML+ G  P    Y  L   L ++ +V+ A 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +LF+ MR++    D  T+   I+ L   G + EA EL+R + +  YE  +   + LI
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 206/413 (49%), Gaps = 14/413 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      D    LF+ + S  + PD++T++ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R    PN VT+T+LI       ++  A  LF       C P+V TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 225 TGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +G    A  ++  M  GN +            G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  E   P+ + Y ++I GFC     +EA+ +F +M ++G  P+V T+S ++D L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D A ++L  M+     PN   Y  +IDG C   K D A +L   ME  GC  +V
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K   V++ L L  +M +KG  P  VTY  L         ++ A +L DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           M++ +       Y   I+G  +  F++ +L L   I ++     I +Y  LID
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNRE-FII-SLGLLDEIAENVAVPIIPAYRILID 887



 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 23/430 (5%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           +  ML  H     V+  N L  CL     ++   S+ + + S G  PD  T+S +I   C
Sbjct: 433 YGEMLDAHVVLNKVNVSN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
              +V + F++   +  +   P+  T+T LI   C    + +A   F +     C P+V 
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY  LI+   +      A  LFE M +        C PN VTY  +IDG CK G ++KA 
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEG------CIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 274 ELFLKMK---------------DENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           +++ +M+               D NI +P++ TY +++ G C A+   EA+ L   M  +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G +P+ + +  ++D  CK GK+D+A  +   M  RG  PN YTY++LID      ++D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            K+   M  N C  +V+ Y  +I+  CK    +EA  L S M  KG  P VVTY  +  G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             +  +V++ L+L  +M     A +  TY   I+  C +G + +A +L   ++ + +  +
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 498 IVSYNCLIDG 507
           +  Y  +I+G
Sbjct: 846 MAGYRKVIEG 855



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 206/460 (44%), Gaps = 66/460 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    DT   + + ++ +G   D YT    ++  CK GR       
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
           L  I +  F  + V +T +I GLC  S   EA    ++ R  +C P+V TY         
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+LI+  CR+G    A  L ++M    G+ G  C
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--C 400

Query: 250 KPNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           +P  V YN +I G+C          ++ A++ + +M D ++  + V  +++ R  C A  
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + +A  +  EMM +G  PD  T+S ++  LC   K+D A  L E M    V P+ +TY  
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LID +C    +  ARK F  M  +GC  +VV+Y  LI+ Y K + +  A  L+  MLS+G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT----------------YTYN 467
             P VVTY  L  G  +  Q+E+A +++  MR N    D                 +TY 
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +DGLCK+  V EA +L   +     E N + Y+ LIDG
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 206/440 (46%), Gaps = 32/440 (7%)

Query: 94  FDYMLRMHPSP--PPVSSFNILF-GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D++ RM  S   P V ++ IL  GCL K +       +   + + G +P     + LI+
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRK-RQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +C+ G  S+ + +L ++      P  V +  LI G+C   ++     L    + +    
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 211 DVFTY------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           D          + L   LC  G    A ++  EM +     G +  P+T TY+ +I  LC
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK----GFI--PDTSTYSKVIGLLC 491

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
               VD A  LF +MK  ++ PDV TYT +I  FC      +A++ F EM+  G  P+VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++    K  KM  A+ L E+M+  G  PN  TY  LIDG+C + +I+ A +++  M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 385 ESNGCMHDV----------------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             N  + DV                 +Y  L++  CK   V+EA  L   M  +G +P  
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           + Y+ L  G  ++ +++ A  +F +M       + YTY++ ID L K   +  AL++   
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + ++    N++ Y  +IDGL
Sbjct: 732 MLENSCAPNVIIYTEMIDGL 751



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 169/366 (46%), Gaps = 15/366 (4%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++LI   C+ G  +     LGR+    + P+ +T+ +L++      R+  A  +  +   
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                D +T    ++ LC+ G    AL L E+      EF    K +TV Y  +I GLC+
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKE-----EF----KLDTVIYTQMISGLCE 311

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
               ++A +   +M+  +  P+VVTY  ++ G          KR+   M+ +G  P    
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++   C++G    A +LL+ M   G  P    YN LI G C  +K+     L ++ +
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 386 SNGCMHDV------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           + G M D       V+ + L    C     E+A S+  EM+SKG  P   TY+ +   L 
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              +V+ A  LF+EM+ NHV  D +TY   ID  CK G + +A + F  +       N+V
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 500 SYNCLI 505
           +Y  LI
Sbjct: 552 TYTALI 557



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 183/430 (42%), Gaps = 81/430 (18%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M+R     P V ++  L     K +   +   LF+ + S G  P++ T++ LI+  C
Sbjct: 538 FDEMVR-DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHC 596

Query: 154 KMGRVSHGFVVLGRILRSC----------------FTPNAVTFTSLIKGLCAESRIMEAA 197
           K G++     +  R+  +                   PN  T+ +L+ GLC   ++ EA 
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNG------------- 243
            L     V  CEP+   Y+ LI+G C+ G    A  +F +M+  G G             
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 244 --------EFGVV-------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                      V+       C PN + Y  +IDGLCK G  D+A  L   M+++  +P+V
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT++I GF  A   ++   L  +M  +G  P+ VT+ V+++  C  G +D A +LL+ 
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 349 M--------------IWRGVN-------------------PNTYTYNTLIDGYCLTDKID 375
           M              +  G N                   P    Y  LID +C   +++
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE 896

Query: 376 HARKLFVSMES--NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            A +L   M S  +    D   Y++LI        V++A  LY++M+ +G  P +  +  
Sbjct: 897 LALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFY 956

Query: 434 LFLGLFEIHQ 443
           L  GL  I++
Sbjct: 957 LVKGLIRINR 966



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 4/243 (1%)

Query: 267 GFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G  D+  E FL+ ++DE+          +IR  C    WN A      + D G +P  +T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++    +  ++D A  +   M   G N + YT    +   C   K    R+    +E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLC---KAGRWREALALIE 291

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 D V Y  +I+  C+    EEA+   S M S    P VVTY  L  G     Q+ 
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           R  ++   M           +N+ I   C+SG    A +L + + D   +   V YN LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 506 DGL 508
            G+
Sbjct: 412 GGI 414


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 213/403 (52%), Gaps = 14/403 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNIL-FGCL--AKNKHYDTVLS-LFKRLNSAGLFPDIYTHSIL 148
           +FD M  +    P  SSF ++  GC    K +  D  LS + +R    G  PD  T +++
Sbjct: 227 VFDEM-SVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQR----GFIPDNATCTLI 281

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  C+ G V+       +++   F PN + FTSLI GLC +  I +A  +  +      
Sbjct: 282 LSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 341

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P+V+T+  LI+GLC+ G T  A  LF ++   +     + KPN  TY ++I G CKE  
Sbjct: 342 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----IYKPNVHTYTSMIGGYCKEDK 396

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A+ LF +MK++ + P+V TYT++I G C A +++ A  L   M D+G +P++ T++ 
Sbjct: 397 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNA 456

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LCK  +  +A  LL      G+  +  TY  LI   C    I  A   F  M   G
Sbjct: 457 VIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTG 516

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+   N LI  +C+ K ++E+  L+  ++S G+ PT  TY ++  G  +    + AL
Sbjct: 517 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLAL 576

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           K F  M+R+    D++TY + I GLCK   V EA +L+ A+ D
Sbjct: 577 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 619



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 177/348 (50%), Gaps = 8/348 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F  M+ +   P  ++ F  L   L K         + + +   G  P++YTH+ 
Sbjct: 292 NRAIWYFRKMIDLGFKPNLIN-FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 350

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK G     F +  +++RS  + PN  T+TS+I G C E ++  A  LF++ +  
Sbjct: 351 LIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 410

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+V TY TLING C+ G+   A  L   M +         +PN  TYN +ID LCK+
Sbjct: 411 GLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEG------FRPNIYTYNAVIDSLCKK 464

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
               +A EL  K     +  D VTYT +I+  C  +D  +A   F  M   G + D+   
Sbjct: 465 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLN 524

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++   C+  KM ++ RL +L++  G+ P   TY ++I GYC     D A K F +M+ 
Sbjct: 525 NILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKR 584

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           +GC+ D  +Y +LI+  CK   V+EA  LY  M+ +G+ P  VT  TL
Sbjct: 585 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 632



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 116/216 (53%), Gaps = 3/216 (1%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++R F      NEA  + ++M +QG+ P  +T + +++   ++G +D A  + + M  RG
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 354 VNPNTYTYNTLIDGYCLTD-KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           V P++ ++  ++ G C  D KI  A +    M   G + D  +   +++  C+N  V  A
Sbjct: 236 VCPDSSSFKLMVIG-CFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           +  + +M+  G KP ++ + +L  GL +   +++A ++ +EM RN    + YT+   IDG
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354

Query: 473 LCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDG 507
           LCK G+  +A  LF + +R   Y+ N+ +Y  +I G
Sbjct: 355 LCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGG 390



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 20/201 (9%)

Query: 51  KLKESLRL--------TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHP 102
           K+KES RL         V  + +    +   CK   +GD +L     AL  F  M R H 
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCK---EGDFDL-----ALKYFHNMKR-HG 586

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
             P   ++  L   L K    D    L++ +   GL P   T   L   +CK    +   
Sbjct: 587 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAM 646

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           +VL  + +  +     T  +L++ LC+E ++  AA  F K        D  T        
Sbjct: 647 IVLEPLDKKLWIR---TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 703

Query: 223 CRTGHTIVALNLFEEMANGNG 243
             +G   +  +L E ++ G G
Sbjct: 704 SESGKNNLVADLTERISRGVG 724


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 194/409 (47%), Gaps = 22/409 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    L K +   G  PD  T+S +I   C   +V   F++   +     TP
Sbjct: 197 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 256

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A  LF + R   C P V TY  LI+   +      A ++F
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---------------- 279
             M +        C+PN VTY  ++DGLCK G + KA E++ K+                
Sbjct: 317 HRMVDAG------CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               + P+VVTY +++ G C A+  + A  L   M+  G +P+ + +  ++D  CK GK+
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P+ +TY +LID      ++D A K+   M  + C  +VV+Y  +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C+  + E+AL L S M  KG  P VVTY  L  GL +  +++ +L LF +M R   
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  TY   I+ LC +G + +A  L   ++ + +   +  Y C I G 
Sbjct: 551 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 213/427 (49%), Gaps = 28/427 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDT--VLSLFKRLNSAGLFPDIYTHSI----LINCFCKMGR 157
           PP    +NI  G +   +   +  +L L +++    L  +   + +       C C +G+
Sbjct: 144 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 203

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
               F ++  ++R  F P+  T++ +I  LC  +++ +A  LF + ++    PDV+TY  
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 263

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+  C+ G    A  LFEEM +      V C P  VTY  +I    K   V +A ++F 
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD----------------QGVQP 321
           +M D    P+ VTY +++ G C A + ++A  ++ +++                   + P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT+  ++D LCK  K+D A  LL+ M+  G  PN   Y+ LIDG+C   KID A+++F
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M   G +  V +Y +LI+   K+  ++ A+ + S+ML     P VVTY  +  GL  I
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            + E+ALKL   M     + +  TY   IDGL K+G +  +L+LF  +       N V+Y
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557

Query: 502 NCLIDGL 508
             LI+ L
Sbjct: 558 RVLINHL 564



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 198/399 (49%), Gaps = 14/399 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ +   L      +    LF+ +   G+ PD+YT++ILI+ FCK G +     +
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +P  VT+T+LI       ++ +A  +F +     C P+  TY  L++GLC+
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340

Query: 225 TGHTIVALNLFEEMA----NGNGEFGVVCK------PNTVTYNTIIDGLCKEGFVDKAKE 274
            G+   A  ++ ++     + + +F   C+      PN VTY  ++DGLCK   VD A E
Sbjct: 341 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M      P+ + Y ++I GFC A   + A+ +F++M   G  P V T++ ++D + 
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K+G++D A ++L  M+     PN  TY  +IDG C   + + A KL   ME  GC  +VV
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  LI+   K   ++ +L L+++M  KG  P  VTY  L   L     +++A  L  EM
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580

Query: 455 RRNHVAADTYTYNNFIDGLCKSGF----VLEALELFRAI 489
           ++ +       Y   I G  KS      +LE +E +  +
Sbjct: 581 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTV 619



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 211/472 (44%), Gaps = 58/472 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F  M +M    P V ++ IL     K    +    LF+ + S G  P + T++ 
Sbjct: 240 EKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           LI+ + K  +V     +  R++ +   PN VT+ +L+ GLC    I +A  ++ K     
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358

Query: 203 -----HRVFACE------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
                   F CE      P+V TY  L++GLC+      A  L + M +        C+P
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG------CEP 412

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N + Y+ +IDG CK G +D A+E+FL+M      P V TYTS+I         + A ++ 
Sbjct: 413 NHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 472

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            +M+     P+VVT++ ++D LC+ G+ +KA +LL LM  +G +PN  TY  LIDG    
Sbjct: 473 SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKA 532

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA------------------- 412
            KID +  LF  M   GC  + V+Y  LIN  C    +++A                   
Sbjct: 533 GKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 592

Query: 413 --------------LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR-- 456
                         L +  EM S G  P    Y  L     +  ++E A++L  EM    
Sbjct: 593 RCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP 652

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + V  D   Y + I  LC +  V EA  L+  +    +   +  + CLI GL
Sbjct: 653 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGL 704



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 209/472 (44%), Gaps = 63/472 (13%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F + +R +   P V ++  L     K K       +   + + G  P+    + L++ +C
Sbjct: 64  FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 123

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA------ 207
                ++ + +L R+      P  V +   I  +C + ++     L    +++       
Sbjct: 124 NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN 183

Query: 208 ---------------CE--------------------PDVFTYNTLINGLCRTGHTIVAL 232
                          C                     PD  TY+ +I  LC       A 
Sbjct: 184 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 243

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            LF+EM        V   P+  TY  +ID  CK G +++A+ LF +M+    +P VVTYT
Sbjct: 244 LLFQEMKM------VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I  +  A    +A  +F  M+D G +P+ VT+  ++D LCK G + KA  +   +I  
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 353 G----------------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
                            + PN  TY  L+DG C   K+DHA +L  +M S+GC  + + Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           + LI+ +CK   ++ A  ++ +M   G  P+V TY +L   +F+  +++ A+K+  +M +
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    +  TY   IDGLC+ G   +AL+L   + +     N+V+Y  LIDGL
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 181/407 (44%), Gaps = 18/407 (4%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +  ++D  +S   R+      P++ T+  L++ F K  ++     ++  ++     PN
Sbjct: 52  LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
              F SL+   C E     A  L  +     C P    YN  I  +C     + + +L +
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLD 170

Query: 237 EMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                 GE     C  N V        LC  G  DKA +L  +M  +   PD  TY+ VI
Sbjct: 171 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 230

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
              C+A    +A  LF EM   GV PDV T+++++D  CK G +++A  L E M   G +
Sbjct: 231 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 290

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P   TY  LI  Y    ++  A  +F  M   GC  + V+Y  L++  CK  ++ +A  +
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350

Query: 416 YSEMLSKG----------------IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           Y++++                   + P VVTY  L  GL + H+V+ A +L D M  +  
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +   Y+  IDG CK+G +  A E+F  +    Y  ++ +Y  LID
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 457



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 203/453 (44%), Gaps = 58/453 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A  +F+ M R     P V ++  L     K K       +F R+  AG  P+  T+  
Sbjct: 275 EQAQWLFEEM-RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333

Query: 148 LINCFCKMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAES 191
           L++  CK G +S  F V  +++                R    PN VT+ +L+ GLC   
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           ++  A  L        CEP+   Y+ LI+G C+ G    A  +F +M     + G +  P
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT----KCGYL--P 447

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           +  TY ++ID + K+G +D A ++  +M  ++  P+VVTYT++I G C   +  +A +L 
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 507

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M ++G  P+VVT++ ++D L K GK+D +  L   M  +G +PN  TY  LI+  C  
Sbjct: 508 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 567

Query: 372 DKIDHARKLFVSME------------------------SNGCMHDVVSYNT--------- 398
             +D AR L   M+                        S G + ++ SY T         
Sbjct: 568 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGM 627

Query: 399 LINWYCKNKDVEEALSLYSEMLS--KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           LI+ + K   +E A+ L+ EM+     +K     Y +L   L    QVE A +L+ EM R
Sbjct: 628 LIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTR 687

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                +   +   I GL +     EAL+L   I
Sbjct: 688 RGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 720



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 191/427 (44%), Gaps = 54/427 (12%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           ++ +G   D +T     +  CK GR +     L  I R  F  + V  T +I GL   S 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH-----TIVAL----------NLFEE 237
             EA +   + R  +C P+V TY TL++G  +         I+ +          +LF  
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 238 MANG--------------NGEFGVVCKPNTVTYNTIIDGLCKE------GFVDKAKELFL 277
           + +               N      C P  V YN  I  +C +        +D A++++ 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M   N   + V   +  R  C    +++A +L  EMM +G  PD  T+S ++  LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K++KA  L + M   GV P+ YTY  LID +C    I+ A+ LF  M S GC   VV+Y 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--- 454
            LI+ Y K K V +A  ++  M+  G +P  VTY  L  GL +   + +A +++ ++   
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 455 -------------RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
                         R+ +A +  TY   +DGLCK+  V  A EL  A+  S  E N + Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 502 NCLIDGL 508
           + LIDG 
Sbjct: 418 DALIDGF 424



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 41/286 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   + K+   D  + +  ++      P++ T++ +I+  C++G       +
Sbjct: 447 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 506

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     +PN VT+T+LI GL    +I  +  LFT+     C P+  TY  LIN LC 
Sbjct: 507 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 566

Query: 225 TG---------------------------------HTIVALNLFEEMANGNGEFGVVCKP 251
            G                                   I +L + EEM +    +G V  P
Sbjct: 567 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMES----YGTV--P 620

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKD--ENINPDVVTYTSVIRGFCYANDWNEAKR 309
               Y  +ID   K G ++ A EL  +M +   ++  D   Y S+I+  C A+   EA R
Sbjct: 621 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 680

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
           L+ EM  +G  P++  F  ++  L +  K D+A +L   +   GVN
Sbjct: 681 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/319 (36%), Positives = 178/319 (55%), Gaps = 6/319 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+A+T+  +++ LC   RI +A A   +      +PD F YN +++GLC+      A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           FE+M            PN VTYNT+I+GLCK   ++ A ELF +M  +   P  V+Y ++
Sbjct: 67  FEKMVKQR------INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I GFC   D   AK +F +M+     P+VVT++ ++D L K+GK+  A+ +L+ M+ +GV
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  TY+ LIDG+C   ++D A KL   M + G    VV+YN L+N  C+   +E+A  
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+  M  +   PTVVTYNTL   L    Q++ A +L+ EM       D  TY+    GL 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 475 KSGFVLEALELFRAIRDSK 493
           ++G V EA EL   ++ +K
Sbjct: 301 RAGKVHEAQELMEKMKLTK 319



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 6/317 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           +PP   ++  +   L K K  D  L+  + + + G+ PD + ++ +++  C+  +V    
Sbjct: 5   APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 64

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           ++  ++++    PN VT+ +LI GLC   RI  A  LF +       P   +YNTLI+G 
Sbjct: 65  LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+    + A ++F++M   N      C PN VTY T+IDGL K G V  A E+   M  +
Sbjct: 125 CKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 178

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P+V TY+ +I GFC     +EA +L  +M+ QG+ P VVT++++++ LC+  K++ A
Sbjct: 179 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 238

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +L   M  R  +P   TYNTL+   C   ++D A +L+  M + GC  D ++Y+TL   
Sbjct: 239 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWG 298

Query: 403 YCKNKDVEEALSLYSEM 419
             +   V EA  L  +M
Sbjct: 299 LTRAGKVHEAQELMEKM 315



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 142/258 (55%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ +TY  I++ LCK   +D A     +M    I PD   Y  V+ G C      EA+ L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F +M+ Q + P+VVT++ +++ LCK  +++ A  L + M  +G  P   +YNTLIDG+C 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
              +  A+ +F  M  + C+ +VV+Y TLI+   K+  V+ A  +   M+ KG+ P V T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y+ L  G  ++ +V+ A KL ++M    +A    TYN  ++ LC++  + +A +LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 491 DSKYELNIVSYNCLIDGL 508
             +    +V+YN L+  L
Sbjct: 247 QRRCHPTVVTYNTLLRAL 264



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 7/269 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +F+ M++   +P  V ++N L   L K    +T   LFK +   G  P   +++ 
Sbjct: 61  EEARLLFEKMVKQRINPN-VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK   +     V  +++RS   PN VT+T+LI GL    ++  AA +        
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY+ LI+G C+      A  L E+M       G+   P  VTYN +++ LC+  
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ----GIA--PTVVTYNILLNSLCRAD 233

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A +LF  M     +P VVTY +++R  C+    + A RL+ EM+ +G  PD +T+ 
Sbjct: 234 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 293

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNP 356
            +   L + GK+ +A  L+E M     NP
Sbjct: 294 TLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 202/408 (49%), Gaps = 22/408 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     ++    + K +   G  PD  T++ +I   C+  +V   F++   + R+   P
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A + F + R   C P+V TY  L++   ++   I A ++F
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN------------ 283
             M +        C PN VTY+ +IDGLCK G + KA E++ K+   +            
Sbjct: 546 HRMVDA------ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGN 599

Query: 284 ----INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               I P+VVTY ++I G C A   ++A  L   M+  G +P+ + +  ++D  CK GK+
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P+ +TY +LID      ++D A K+   M ++ C  +VV+Y  +
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+   K  ++E+AL+L S M  KG  P VVTY  L  GL +  + + +LKLF +M     
Sbjct: 720 IDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGC 779

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A +  TY   I+  C +G + EA  L   ++ + +  ++  Y+C + G
Sbjct: 780 APNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQG 827



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 188/381 (49%), Gaps = 10/381 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++  +   L + K  +    LF+ +  AG+ PD+YT++ILI+ FCK G +      
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +PN VT+T+L+       ++++A  +F +    AC P+  TY+ LI+GLC+
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569

Query: 225 TGHTIVALNLFEEMANGNG--------EFGVVC--KPNTVTYNTIIDGLCKEGFVDKAKE 274
            G    A  ++E++   +G        E    C   PN VTY  +IDGLCK   V  A E
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHE 629

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M      P+ + Y ++I GFC     + A+ +F+ M   G  P V T++ ++D + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K+G++D A ++L  M+    NPN  TY  +IDG     +I+ A  L   ME  GC  +VV
Sbjct: 690 KDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVV 749

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  LI+   K    + +L L+ +M SKG  P  VTY  L         ++ A  L DEM
Sbjct: 750 TYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809

Query: 455 RRNHVAADTYTYNNFIDGLCK 475
           +  H       Y+  + G  K
Sbjct: 810 KHTHWPKHLQGYHCAVQGFSK 830



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 202/438 (46%), Gaps = 29/438 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I + M+    +P P S FN L         Y     LF R+ + G  P    ++I I   
Sbjct: 328 IINMMMTEGCNPNP-SLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSI 386

Query: 153 CKMGRVSHGFV------VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           C    + +  +      V   +L +    N V   +  + LC   +  +A  +  +    
Sbjct: 387 CGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK 446

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD  TY  +I  LC+      +  LF+EM       GV   P+  TY  +ID  CK 
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA----GV--NPDVYTYTILIDSFCKA 500

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A+  F +M+    +P+VVTYT+++  +  +    +A  +F  M+D    P+ VT+
Sbjct: 501 GLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTY 560

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVN----------------PNTYTYNTLIDGYCL 370
           S ++D LCK G++ KA  + E +I    N                PN  TY  LIDG C 
Sbjct: 561 SALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCK 620

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+  A +L  +M + GC  + + Y+ LI+ +CK   ++ A  ++  M   G  P+V T
Sbjct: 621 AQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHT 680

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y +L   +F+  +++ A+K+  EM  +    +  TY   IDGL K G + +AL L   + 
Sbjct: 681 YTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLME 740

Query: 491 DSKYELNIVSYNCLIDGL 508
           +     N+V+Y  LIDGL
Sbjct: 741 EKGCSPNVVTYTALIDGL 758



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 218/509 (42%), Gaps = 83/509 (16%)

Query: 62  DRASLKKFLK---ERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLA 118
           DR  L++ L     RC   G  D  L    E   + D+  R     P   ++N L   LA
Sbjct: 164 DREVLRRLLNVLVRRCCRHGLWDEAL---EELGRLKDFGYR-----PSAVTYNALVQVLA 215

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
                +    + K ++++G   D  T        CK+GR +     L  + +  F  + V
Sbjct: 216 SAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLDTV 272

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT---GHTIVALNLF 235
             T +I GL   S   EA +   + R  +C P+V TY TL++G  +    G     +N+ 
Sbjct: 273 LCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMM 332

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
             M  G       C PN   +N+++ G C  G    A +LF +M      P  V Y   I
Sbjct: 333 --MTEG-------CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFI 383

Query: 296 -----------------------------------------RGFCYANDWNEAKRLFIEM 314
                                                    R  C    + +A ++  EM
Sbjct: 384 GSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEM 443

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           M +G  PD  T++ ++  LC+  K++K+  L + M   GVNP+ YTY  LID +C    I
Sbjct: 444 MRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLI 503

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + AR  F  M S GC  +VV+Y  L++ Y K+K + +A  ++  M+     P  VTY+ L
Sbjct: 504 EQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSAL 563

Query: 435 FLGLFEIHQVERALKLFDEM--RRNHVAADTY--------------TYNNFIDGLCKSGF 478
             GL +  ++++A ++++++     +V +D Y              TY   IDGLCK+  
Sbjct: 564 IDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQK 623

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           V +A EL  A+  +  E N + Y+ LIDG
Sbjct: 624 VSDAHELLDAMLAAGCEPNQIVYDALIDG 652



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 194/450 (43%), Gaps = 94/450 (20%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A   FD M R     P V ++  L     K+K       +F R+  A  +P+  T+S 
Sbjct: 504 EQARSWFDEM-RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562

Query: 148 LINCFCKMGRVSHGFVVLGRILRSC----------------FTPNAVTFTSLIKGLCAES 191
           LI+  CK G +     V  +++ +                   PN VT+ +LI GLC   
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG---------------------HTI- 229
           ++ +A  L        CEP+   Y+ LI+G C+ G                     HT  
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYT 682

Query: 230 -------------VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
                        +A+ +  EM N +      C PN VTY  +IDGL K G ++KA  L 
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSEMLNDS------CNPNVVTYTAMIDGLSKVGEIEKALNLL 736

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             M+++  +P+VVTYT++I G       + + +LF +M  +G  P+ VT+ V+++  C  
Sbjct: 737 SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAA 796

Query: 337 GKMDKASRLLELMI---W-----------RGVN-------------------PNTYTYNT 363
           G +D+A  LL+ M    W           +G +                   P    Y  
Sbjct: 797 GLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGM 856

Query: 364 LIDGYCLTDKIDHARKL---FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           LID +    +++ A +L    V + S+  M     Y +LI   C    VEEA +LY+EM 
Sbjct: 857 LIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMT 916

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            KGI P ++ + +L  GL E+++ + AL+L
Sbjct: 917 RKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 186/456 (40%), Gaps = 66/456 (14%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            N+L     ++  +D  L    RL   G  P   T++ L+      G+V  GF V   + 
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            S F  +  T     + LC   R  +A  +  K        D      +I+GL       
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDF---NLDTVLCTQMISGLMEASLFN 288

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A++    M   +      C PN VTY T++ G  K+      K +   M  E  NP+  
Sbjct: 289 EAMSFLHRMRCNS------CIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPS 342

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN------------- 336
            + S++ G+C A D+  A +LF  M   G  P  V +++ +  +C               
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVE 402

Query: 337 ----------------------------GKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
                                       GK +KA ++L+ M+ +G  P+T TY  +I   
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K++ +  LF  M+  G   DV +Y  LI+ +CK   +E+A S + EM S G  P V
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY  L     +  Q+ +A  +F  M       +  TY+  IDGLCK+G + +A E++  
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 489 I--------RDSKYE--------LNIVSYNCLIDGL 508
           +         D  +E         N+V+Y  LIDGL
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGL 618



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 45/299 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   + K+   D  + +   + +    P++ T++ +I+   K+G +     +
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNL 735

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     +PN VT+T+LI GL    +   +  LF +     C P+  TY  LIN  C 
Sbjct: 736 LSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCA 795

Query: 225 TG-------------HT--------------------IVALNLFEEMANGNGEFGVVCKP 251
            G             HT                    I +L L EEM +          P
Sbjct: 796 AGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHE------TVP 849

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT---YTSVIRGFCYANDWNEAK 308
               Y  +ID   K G ++ A EL  ++ + + + ++ +   Y S+I+  C A+   EA 
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAF 909

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            L+ EM  +G+ PD++ F  ++  L +  K D+A +L       GVN   +  N   DG
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVN---WQDNKSFDG 965


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 205/410 (50%), Gaps = 14/410 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
            +S N L   L + +    +  L   +    + P + T  IL+N  CK  R+     V  
Sbjct: 281 AASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFD 340

Query: 167 RILRSCFT------PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC-EPDVFTYNTLI 219
           R+     +      P+ V F +LI GLC   +  +  +L  + ++     P+  TYN LI
Sbjct: 341 RLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLI 400

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +G  + G+   A  LF +M     E GV  +PN +T NT++DGLCK G V +A E F +M
Sbjct: 401 DGFFKAGNFDRAHELFRQM----NEEGV--QPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           K + +  +  TYT++I  FC  N+ N A + F EM+  G  PD V +  ++  LC  G+M
Sbjct: 455 KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRM 514

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           + AS ++  +   G + +   YN LI G+C   K++   +L   ME  G   D ++YNTL
Sbjct: 515 NDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTL 574

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNH 458
           I++  K  D   A  +  +M+ +G++P+VVTY  +         V+  +K+F EM   + 
Sbjct: 575 ISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSK 634

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V  +T  YN  ID LC++  V  A+ L   ++  +   N  +YN ++ G+
Sbjct: 635 VPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV 684



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 211/465 (45%), Gaps = 50/465 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFN----ILFGCLAKNKHY---DTVLSLFKRLNSAGLFP 140
            +AL + D M      P   S F+    I+FG L ++        V+ L  +L   G+FP
Sbjct: 191 GDALHVLDEM------PQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFP 244

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D +  + L+   C   +    + VL  ++R     +A +  +L+  L     I     L 
Sbjct: 245 DGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELL 304

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +       P V T+  L+N LC+      AL +F+ +    G   V  +P+ V +NT+I
Sbjct: 305 AEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLI 364

Query: 261 DGLCKEGFVDKAKELFLKMKDENIN-PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           DGLCK G  +    L  +MK  NIN P+ VTY  +I GF  A +++ A  LF +M ++GV
Sbjct: 365 DGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGV 424

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           QP+V+T + ++D LCK+G++ +A      M  +G+  N  TY  LI  +C  + I+ A +
Sbjct: 425 QPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQ 484

Query: 380 LFVSMESNGCMHDVV-----------------------------------SYNTLINWYC 404
            F  M S+GC  D V                                    YN LI+ +C
Sbjct: 485 CFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFC 544

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K +E    L +EM   G+KP  +TYNTL   L +      A K+ ++M +  +     
Sbjct: 545 KKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVV 604

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDGL 508
           TY   I   C    V E +++F  +   SK   N V YN LID L
Sbjct: 605 TYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDAL 649



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 191/433 (44%), Gaps = 49/433 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRL------NSAGLFPDIYTHSILINCFCKMGRV 158
           P V +F IL   L K +  D  L +F RL      N  G+ PD+   + LI+  CK+G+ 
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373

Query: 159 SHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
             G  +L  + + +   PN VT+  LI G         A  LF +      +P+V T NT
Sbjct: 374 EDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNT 433

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++GLC+ G    A+  F EM  G G      K N  TY  +I   C    +++A + F 
Sbjct: 434 LVDGLCKHGRVHRAVEFFNEM-KGKG-----LKGNAATYTALISAFCGVNNINRAMQCFE 487

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAK----------------------------- 308
           +M     +PD V Y S+I G C A   N+A                              
Sbjct: 488 EMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547

Query: 309 ------RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
                  L  EM + GV+PD +T++ ++  L K G    AS+++E MI  G+ P+  TY 
Sbjct: 548 KLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYG 607

Query: 363 TLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
            +I  YC    +D   K+F  M  ++    + V YN LI+  C+N DV+ A+SL  +M  
Sbjct: 608 AIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKV 667

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           K ++P   TYN +  G+ +   + +A +L D M       D  T     + L   G + +
Sbjct: 668 KRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727

Query: 482 ALELFRAIRDSKY 494
                   +DS Y
Sbjct: 728 LKHFVEGYQDSSY 740



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 8/366 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           + L + + M   + + P   ++N L     K  ++D    LF+++N  G+ P++ T + L
Sbjct: 375 DGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTL 434

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK GRV         +       NA T+T+LI   C  + I  A   F +     C
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGC 494

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD   Y +LI+GLC  G    A  +  ++          C      YN +I G CK+  
Sbjct: 495 SPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSC------YNVLISGFCKKKK 548

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++  EL  +M++  + PD +TY ++I       D+  A ++  +M+ +G++P VVT+  
Sbjct: 549 LERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGA 608

Query: 329 IMDELCKNGKMDKASRLL-ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           I+   C    +D+  ++  E+     V PNT  YN LID  C  + +D A  L   M+  
Sbjct: 609 IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +  +YN ++      K + +A  L   M+ +  +P  +T   L   L  + ++E+ 
Sbjct: 669 RVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK- 727

Query: 448 LKLFDE 453
           LK F E
Sbjct: 728 LKHFVE 733


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 177/299 (59%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+   +N   +   + G    A+++F +M     + G+   P+ V+Y  +ID LCK G V
Sbjct: 28  PNHHIFNIFFSAYAKCGMIDKAMDIFNKMR----QHGL--SPDAVSYGALIDALCKLGRV 81

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A+  F +M +E + P++V ++S++ G C  + W + + LF EM++ G+ P++V F+ I
Sbjct: 82  DDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTI 141

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LCK G++ +  RL++ +   GV P+  +YNTLIDG+CL   ID A KL   M S G 
Sbjct: 142 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 201

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +  SYNTL++ YCK   ++ A SL+ +MLS GI P VVTYNT+  GLF+  +   A +
Sbjct: 202 KPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 261

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L+  M  +      YTYN  ++GLCKS  V EA ++F+++     +LNI+++  +I  L
Sbjct: 262 LYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FNI F   AK    D  + +F ++   GL PD  ++  LI+  CK+GRV    V   +++
Sbjct: 33  FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
               TPN V F+SL+ GLC+  +  +   LF +       P++  +NT++  LC+ G  +
Sbjct: 93  NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 152

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
               L + +       GV  +P+ ++YNT+IDG C  G +D+A +L   M    + P+  
Sbjct: 153 EGQRLVDSIEC----MGV--RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSF 206

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +Y +++ G+C A   + A  LF +M+  G+ P VVT++ I+  L +  +  +A  L   M
Sbjct: 207 SYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 266

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G     YTYNT+++G C ++ +D A K+F S+ S G   +++++  +I    K    
Sbjct: 267 INSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 326

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A+ L++ + + G+ P VVTY  +   L E   +E    LF  M +N  A ++   N  
Sbjct: 327 EDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 386

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  L   G +  A      + +  + +   + + LI
Sbjct: 387 VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 422



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 190/361 (52%), Gaps = 6/361 (1%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++ +   G +S    +L  ++ +  +PN   F            I +A  +F K R   
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  +Y  LI+ LC+ G    A   F +M N     GV   PN V +++++ GLC   
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE----GVT--PNIVVFSSLVYGLCSID 114

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +K +ELF +M +  I+P++V + +++   C      E +RL   +   GV+PDV++++
Sbjct: 115 KWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYN 174

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  C  G +D+AS+LLE M+  G+ PN+++YNTL+ GYC   +ID A  LF  M SN
Sbjct: 175 TLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSN 234

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    VV+YNT+++   + K   EA  LY  M++ G K  + TYNT+  GL + + V+ A
Sbjct: 235 GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEA 294

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            K+F  +    +  +  T+   I  L K G   +A++LF AI  +    ++V+Y  + + 
Sbjct: 295 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAEN 354

Query: 508 L 508
           L
Sbjct: 355 L 355



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 193/377 (51%), Gaps = 6/377 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L   + + G+ P+ +  +I  + + K G +     +  ++ +   +P+AV++ +LI  LC
Sbjct: 17  LLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALC 76

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R+ +A   F +       P++  +++L+ GLC          LF EM N      V 
Sbjct: 77  KLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLN------VG 130

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             PN V +NTI+  LCKEG V + + L   ++   + PDV++Y ++I G C A   +EA 
Sbjct: 131 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 190

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L   M+  G++P+  +++ ++   CK G++D A  L   M+  G+ P   TYNT++ G 
Sbjct: 191 KLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGL 250

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             T +   A++L+++M ++G    + +YNT++N  CK+  V+EA  ++  + SKG++  +
Sbjct: 251 FQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 310

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +T+  +   L +  + E A+ LF  +  N +  D  TY    + L + G + E   LF A
Sbjct: 311 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSA 370

Query: 489 IRDSKYELNIVSYNCLI 505
           +  +    N    N L+
Sbjct: 371 MEKNGTAPNSQMLNALV 387



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  FN +   L K         L   +   G+ PD+ +++ LI+  C  G +     +
Sbjct: 133 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 192

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN+ ++ +L+ G C   RI  A +LF K       P V TYNT+++GL +
Sbjct: 193 LEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQ 252

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T     A  L+  M N   ++G+       TYNTI++GLCK   VD+A ++F  +  + +
Sbjct: 253 TKRFSEAKELYLNMINSGTKWGIY------TYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +++T+T +I          +A  LF  +   G+ PDVVT+ V+ + L + G +++   
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366

Query: 345 LLELMIWRGVNPNTYTYNTLI 365
           L   M   G  PN+   N L+
Sbjct: 367 LFSAMEKNGTAPNSQMLNALV 387


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 216/413 (52%), Gaps = 16/413 (3%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M  +PP + ++ ++     + +  +  L+ F RL   GL  D    + ++ C C   R  
Sbjct: 1   MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60

Query: 160 HGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-----CEPDVF 213
               V+L R+      P+A ++  ++K LC ++R  +A  L    R+ A     C PDV 
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLL---RMMAKEEGVCSPDVV 117

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYNT+I+G  + G    A NL+ EM     + G V  P+ VT+N+II+ LCK   VD A+
Sbjct: 118 TYNTVIHGFFKEGKIGKACNLYHEMM----QQGFV--PDVVTHNSIINALCKARAVDNAE 171

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            L  +M D  + P+ VTYTS+I G+     W EA ++F EM  +G+ PD+V+++  MD L
Sbjct: 172 LLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSL 231

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK+G+  +A+ +   M  +G  PN  TY  L+ GY            F +M+ +G + + 
Sbjct: 232 CKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANC 291

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + +  LI+ Y K   ++EA+ + SEM  +G+ P V TY+TL   L  + ++  A+  F++
Sbjct: 292 LVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQ 351

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALEL-FRAIRDSKYELNIVSYNCLI 505
           M    V  +T  Y++ I G C  G +++A EL +  + +     NI  +N ++
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 212/470 (45%), Gaps = 67/470 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K        +L+  +   G  PD+ TH+ +IN  CK   V +  ++
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELL 173

Query: 165 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 189
           L +++ +   PN VT+TS+I G                                   LC 
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---- 245
             R  EAA +F         P++ TY  L++G    G     ++ F  M  G+G      
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM-KGDGIVANCL 292

Query: 246 --------------------------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
                                     G    P+  TY+T+I  LC+ G +  A + F +M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGK 338
               + P+ V Y S+I+GFC   D  +AK L  EMM+ G+ +P++  F+ I+  +CK G+
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +  A  + +L+   G   +   +NTLIDGYCL  ++  A  +  +M S G   D  +YNT
Sbjct: 413 VMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNT 472

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           L+N Y K+  +++ L+L+ EM  K IKPT VTYN +  GLF   +   A K+  EM    
Sbjct: 473 LVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCG 532

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                 TYN  + GLC++    EA+ +F+ +     + NI + N +I+ +
Sbjct: 533 TTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSM 582



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 203/436 (46%), Gaps = 14/436 (3%)

Query: 57  RLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGC 116
           R  + D  S   F+   CK             EA  IF Y +      P + ++ IL   
Sbjct: 215 RGLIPDIVSWNSFMDSLCKHG--------RSKEAAEIF-YSMAAKGHRPNIVTYGILLHG 265

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
            A    +  ++S F  +   G+  +    +ILI+ + K G +    ++L  +     +P+
Sbjct: 266 YATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPD 325

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
             T+++LI  LC   R+ +A   F +      +P+   Y++LI G C  G  + A  L  
Sbjct: 326 VFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVY 385

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM N NG    + +PN   +N+I+  +CKEG V  A  +F  +KD     D++ + ++I 
Sbjct: 386 EMMN-NG----IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLID 440

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G+C   +  +A  +   M+  G+ PD  T++ +++   K+G++D    L   M  + + P
Sbjct: 441 GYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKP 500

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
            T TYN ++DG     +   A+K+   M   G    + +YN ++   C+N   +EA+ ++
Sbjct: 501 TTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMF 560

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            ++ +  +K  + T NT+   ++ + + E A  LF  +  + +  +  TY   I  L K 
Sbjct: 561 QKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKE 620

Query: 477 GFVLEALELFRAIRDS 492
           G V EA  +F ++  S
Sbjct: 621 GSVEEADNMFSSMEKS 636



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 187/374 (50%), Gaps = 7/374 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F IL    AK    D  + +   +   GL PD++T+S LI+  C+MGR++       +++
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAAL-FTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +   PN V + SLI+G C    +++A  L +         P++  +N++++ +C+ G  
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           + A ++F+ +    GE     + + + +NT+IDG C  G + KA  +   M    I PD 
Sbjct: 414 MDAHHIFD-LVKDIGE-----RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY +++ G+  +   ++   LF EM D+ ++P  VT+++I+D L + G+   A ++L  
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           MI  G   +  TYN ++ G C  +  D A  +F  + +     ++ + NT+IN     + 
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            EEA  L+S +   G+ P   TY  +   L +   VE A  +F  M ++  A  +   N+
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647

Query: 469 FIDGLCKSGFVLEA 482
            I  L + G +++A
Sbjct: 648 TIRTLLEKGEIVKA 661


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 207/401 (51%), Gaps = 10/401 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN++   + K    D  + LF+ +      PD YT+  L++  CK+ R+     +
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L  + +  CF P+  TF  LI GLC +        L     +  C P+  TYNTLI+GLC
Sbjct: 239 LDEMQIEGCF-PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 297

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    AL+L + M +        C PN VTY TII+GL K+G       + + M++  
Sbjct: 298 LKGKLDKALSLLDRMVSSK------CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERG 351

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              +   Y+ ++ G        EA RLF E MD+G + + V +S ++D LC++ K D+A 
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++L  M  +G  PN +T+++L+ G+        A +++  M    C  + V Y+ LI+  
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAA 461
           CK+  V EA+ ++++ML+ G +P VV Y+++  GL +   VE ALKL++EM         
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQP 531

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           D  TYN   + LCK   +  A++L  ++ D   + ++V+ N
Sbjct: 532 DVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN 572



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 178/334 (53%), Gaps = 6/334 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PN ++F  +IK +C    +  A  LF +  V  C PD +TY TL++GLC+      A++L
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +EM          C P+  T+N +I+GLCK+G   +  +L   M  +   P+ VTY ++
Sbjct: 239 LDEMQIEG------CFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C     ++A  L   M+     P+ VT+  I++ L K G+    +R+L LM  RG 
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             N Y Y+ L+ G     K + A +LF      GC  + V Y+ L++  C+++  +EA+ 
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMK 412

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           + SEM  KG  P   T+++L  G FE+    +A++++ +M + + A +   Y+  I GLC
Sbjct: 413 ILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLC 472

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K G V+EA+ ++  +  +    ++V+Y+ +I GL
Sbjct: 473 KDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGL 506



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 30/272 (11%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           ++ L   L +++  D  + +   +   G  P+ +T S L+  F ++G       V   + 
Sbjct: 394 YSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMT 453

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           +     N V ++ LI GLC + ++MEA  ++ K     C PDV  Y+++I GLC  G   
Sbjct: 454 KINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVE 513

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            AL L+ EM     +     +P+ +TYN + + LCK+  + +A +L   M D   +PD+V
Sbjct: 514 EALKLYNEMLCLEPD----SQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLV 569

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP--DVVTFSVIMDELC----KNGKMDKAS 343
           T                   +F+ M+ + + P  D   F   +DEL     K  +   AS
Sbjct: 570 TCN-----------------IFLRMLREKLDPPQDGAKF---LDELVVRLLKRQRNLGAS 609

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           +++E+M+ + ++P   T+  ++   C   KI 
Sbjct: 610 KIVEVMLQKFLSPKASTWARVVHELCQPKKIQ 641


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 220/432 (50%), Gaps = 16/432 (3%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
            +  P+EAL +F  +  +    P + + N +   L K      V  LF  +   G+ P +
Sbjct: 118 QMALPDEALSVFGRLREL----PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSV 173

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            T++ LIN     G V+  + V  +++     PN VT+T++I  LC E  I +A  LF +
Sbjct: 174 VTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLE 233

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +     P+++TYN L++   +  +   AL  + ++     + G+V  PN V + T+IDG
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDG 287

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LCK   + +AK +FL M    + P V  Y S+I G   +    EA   F E++ + ++PD
Sbjct: 288 LCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPD 347

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             T S+++  LC  G+M  A+R LE+M   G+  N   YN LID YC +  +D A     
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   G   +VV+Y++LI+ + KN ++E A+++Y+EM++KG++P VVTY  L  G  +  
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNG 467

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE------L 496
            ++ A  L  EM    + ++  T +  +DGLC+   V +A+         K         
Sbjct: 468 DMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIA 527

Query: 497 NIVSYNCLIDGL 508
           N V+Y  LI GL
Sbjct: 528 NSVTYMTLIYGL 539



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 202/416 (48%), Gaps = 22/416 (5%)

Query: 79  QGDINLITPNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           QGD+      +A  ++D M+  R+ P+   V ++  +   L +         LF  +  A
Sbjct: 186 QGDVA-----KAWEVWDQMVARRIDPN---VVTYTTMIYALCEEDCIGDAEGLFLEMKEA 237

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++YT++ L++   K   + H  V    +L+    PN V FT+LI GLC  +RI EA
Sbjct: 238 GMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEA 297

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +F     +   P V  YN+LI+G  R+G+   AL  F+E+           +P+  T 
Sbjct: 298 KNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKE------LRPDEFTC 351

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + ++ GLC  G +  A      M+   I  +   Y  +I  +C + + +EA      M +
Sbjct: 352 SIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSE 411

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV+P+VVT+S ++D   KNG+M+ A  +   M+ +GV PN  TY  LI G+     +D 
Sbjct: 412 VGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 471

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL---YSEMLSKGIKPTV---VT 430
           A  L   ME  G   + ++ + L++  C+   V++A+     YS        P++   VT
Sbjct: 472 AFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVT 531

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           Y TL  GL+   Q   A   F  MR + +  D +TY   I GLC  G+VL A+ L+
Sbjct: 532 YMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLY 587



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +++N+L     K+ + D  L    R++  G+ P++ T+S LI+   K G +     +   
Sbjct: 384 AAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++     PN VT+T+LI G      +  A  L  +        +  T + L++GLCR   
Sbjct: 444 MVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENR 503

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+    E +            N+VTY T+I GL  +G  ++A   F  M+D  + PD
Sbjct: 504 VQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPD 563

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
             TYT VIRG C       A  L+ +M+  GV+P
Sbjct: 564 RFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 206/413 (49%), Gaps = 14/413 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      D    LF+ + S  + PD++T++ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R    PN VT+T+LI       ++  A  LF       C P+V TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 225 TGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +G    A  ++  M  GN +            G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  E   P+ + Y ++I GFC     +EA+ +F +M ++G  P+V T+S ++D L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D A ++L  M+     PN   Y  +IDG C   K D A +L   ME  GC  +V
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K   V++ L L  +M +KG  P  VTY  L         ++ A +L DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           M++ +       Y   I+G  +  F++ +L L   I ++     I +Y  LID
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNRE-FII-SLGLLDEIAENVAVPIIPAYRILID 887



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 23/430 (5%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           +  ML  H     V+  N L  CL     ++   S+ + + S G  PD  T+S +I   C
Sbjct: 433 YGEMLDAHVVLNKVNVSN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
              +V + F++   +  +   P+  T+T LI   C    + +A   F +     C P+V 
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY  LI+   +      A  LFE M +        C PN VTY  +IDG CK G ++KA 
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEG------CIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 274 ELFLKMK---------------DENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           +++ +M+               D NI +P++ TY +++ G C A+   EA+ L   M  +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G +P+ + +  ++D  CK GK+D+A  +   M  RG  PN YTY++LID      ++D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            K+   M  N C  +V+ Y  +I+  CK    +EA  L S M  KG  P VVTY  +  G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             +  +V++ L+L  +M     A +  TY   I+  C +G + +A +L   ++ + +  +
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 498 IVSYNCLIDG 507
           +  Y  +I+G
Sbjct: 846 MAGYRKVIEG 855



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 206/460 (44%), Gaps = 66/460 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    DT   + + ++ +G   D YT    ++  CK GR       
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
           L  I +  F  + V +T +I GLC  S   EA    ++ R  +C P+V TY         
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+LI+  CR+G    A  L ++M    G+ G  C
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--C 400

Query: 250 KPNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           +P  V YN +I G+C          ++ A++ + +M D ++  + V  +++ R  C A  
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + +A  +  EMM +G  PD  T+S ++  LC   K+D A  L E M    V P+ +TY  
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LID +C    +  ARK F  M  +GC  +VV+Y  LI+ Y K + +  A  L+  MLS+G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT----------------YTYN 467
             P VVTY  L  G  +  Q+E+A +++  MR N    D                 +TY 
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +DGLCK+  V EA +L   +     E N + Y+ LIDG
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 206/440 (46%), Gaps = 32/440 (7%)

Query: 94  FDYMLRMHPSP--PPVSSFNILF-GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D++ RM  S   P V ++ IL  GCL K +       +   + + G +P     + LI+
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRK-RQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +C+ G  S+ + +L ++      P  V +  LI G+C   ++     L    + +    
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 211 DVFTY------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           D          + L   LC  G    A ++  EM +     G +  P+T TY+ +I  LC
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK----GFI--PDTSTYSKVIGLLC 491

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
               VD A  LF +MK  ++ PDV TYT +I  FC      +A++ F EM+  G  P+VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++    K  KM  A+ L E+M+  G  PN  TY  LIDG+C + +I+ A +++  M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 385 ESNGCMHDV----------------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             N  + DV                 +Y  L++  CK   V+EA  L   M  +G +P  
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           + Y+ L  G  ++ +++ A  +F +M       + YTY++ ID L K   +  AL++   
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + ++    N++ Y  +IDGL
Sbjct: 732 MLENSCAPNVIIYTEMIDGL 751



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 169/366 (46%), Gaps = 15/366 (4%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++LI   C+ G  +     LGR+    + P+ +T+ +L++      R+  A  +  +   
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                D +T    ++ LC+ G    AL L E+      EF    K +TV Y  +I GLC+
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKE-----EF----KLDTVIYTQMISGLCE 311

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
               ++A +   +M+  +  P+VVTY  ++ G          KR+   M+ +G  P    
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++   C++G    A +LL+ M   G  P    YN LI G C  +K+     L ++ +
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 386 SNGCMHDV------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           + G M D       V+ + L    C     E+A S+  EM+SKG  P   TY+ +   L 
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              +V+ A  LF+EM+ NHV  D +TY   ID  CK G + +A + F  +       N+V
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 500 SYNCLI 505
           +Y  LI
Sbjct: 552 TYTALI 557



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 18/312 (5%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           ++ L     K    D    +F +++  G  P++YT+S LI+   K  R+     VL R+L
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   PN + +T +I GLC   +  EA  L +      C P+V TY  +I+G  + G   
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             L L  +M          C PN VTY  +I+  C  G +D A +L  +MK       + 
Sbjct: 794 KCLELMRQMGAKG------CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y  VI GF    ++  +  L  E+ +    P +  + +++D  CK G+++ A  L + M
Sbjct: 848 GYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 350 IWRGVNPNTYT------YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
                +  +Y+      Y++LI+   L  K+D A +L+  M   G + ++  +  L+   
Sbjct: 906 ----SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961

Query: 404 CKNKDVEEALSL 415
            +    EEAL L
Sbjct: 962 IRINRWEEALQL 973



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 4/243 (1%)

Query: 267 GFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G  D+  E FL+ ++DE+          +IR  C    WN A      + D G +P  +T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++    +  ++D A  +   M   G N + YT    +   C   K    R+    +E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLC---KAGRWREALALIE 291

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 D V Y  +I+  C+    EEA+   S M S    P VVTY  L  G     Q+ 
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           R  ++   M           +N+ I   C+SG    A +L + + D   +   V YN LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 506 DGL 508
            G+
Sbjct: 412 GGI 414



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 97/270 (35%), Gaps = 64/270 (23%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K+K  D  L +  R+      P++  ++ +I+  CK+G+    + +
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN VT+T++I G     ++ +   L  +     C P+  TY  LIN  C 
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 225 TGHTIVALNLFEEMANG----------------NGEFGV-----------VCKPNTVTYN 257
            G    A  L +EM                   N EF +           V  P    Y 
Sbjct: 824 AGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYR 883

Query: 258 TIIDGLCKEGF-------------------------------------VDKAKELFLKMK 280
            +ID  CK G                                      VDKA EL+  M 
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRL 310
                P++  +  +++G    N W EA +L
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 6/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +   M R    PP   S+N++   + +       + +F  +    + P+  T++ +
Sbjct: 182 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 241

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+   K G +  GF +  +++     PNA+T+  L+ GLC   R+ E +AL  +      
Sbjct: 242 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 301

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD FTY+ L +GL R G +   L+LF +        G        T + +++GLCK+G 
Sbjct: 302 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGK 355

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V  A+E+   + +  + P  V Y ++I G+C   +   A   F +M  + ++PD +T++ 
Sbjct: 356 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 415

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LCK  ++  A  LL  M   GVNP   T+NTLID Y  T +++    +   M+ NG
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +VVSY +++N +CKN  + EA+++  +M  K + P    YN +     E    ++A 
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            L ++M+ N ++    TYN  I GLC    + EA E+  ++ + +   + VSYN LI
Sbjct: 536 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 592



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ILF  L++N     +LSLF +    G+    YT SIL+N  CK G+VS    V
Sbjct: 303 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 362

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   P  V + +LI G C    +  A + F + +    +PD  TYN LINGLC+
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 422

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L  EM + NG       P   T+NT+ID   + G ++K   +  +M++  +
Sbjct: 423 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 476

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y S++  FC      EA  +  +M  + V P+   ++ I+D   ++G  D+A  
Sbjct: 477 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 536

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+E M   G++P+  TYN LI G C   +I  A ++  S+ ++  + D VSYNTLI+  C
Sbjct: 537 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 596

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              ++++AL L   M   GIK TV TY+ L  GL    ++     L+ +M +N+V     
Sbjct: 597 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 656

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
            +N  ++   K G  ++A +L + +
Sbjct: 657 IHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 10/404 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P   ++N+L   L +        +L   + S  + PD +T+SIL +   + G    
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              + G+ L++  T    T + L+ GLC + ++  A  +          P    YNTLIN
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C+TG    A + F +M + +       KP+ +TYN +I+GLCK   +  A++L ++M+
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D  +NP V T+ ++I  +       +   +  EM + G++P+VV++  I++  CKNGK+ 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  +L+ M  + V PN   YN +ID Y      D A  L   M+SNG    +V+YN LI
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              C    + EA  + + + +  + P  V+YNTL         +++AL L   M +  + 
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           +   TY+  I GL  +G + E   L++ +  +    N+V  N +
Sbjct: 618 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQN----NVVPSNAI 657



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 202/425 (47%), Gaps = 14/425 (3%)

Query: 87  PNEALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           P+ AL +   +     +P P +SS N+L   L     +  V   F  L SAG  PD +  
Sbjct: 108 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 167

Query: 146 SILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           +  +      G +     +L R+ R     PNA ++  +I G+    R  +A  +F +  
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 227

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KPNTVTYNTIID 261
             A  P+  TYNT+I+G  + G       L ++M         VC   KPN +TYN ++ 
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM---------VCHGLKPNAITYNVLLS 278

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC+ G + +   L  +M  + + PD  TY+ +  G     D      LF + +  GV  
Sbjct: 279 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
              T S++++ LCK+GK+  A  +L+ ++  G+ P    YNTLI+GYC T +++ A   F
Sbjct: 339 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 398

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M+S     D ++YN LIN  CK + +  A  L  EM   G+ PTV T+NTL       
Sbjct: 399 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 458

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            Q+E+   +  EM+ N +  +  +Y + ++  CK+G + EA+ +   +       N   Y
Sbjct: 459 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 518

Query: 502 NCLID 506
           N +ID
Sbjct: 519 NAIID 523



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 149/341 (43%), Gaps = 29/341 (8%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +IL   L K+        + + L +AGL P    ++ LIN +C+ G +   F   G++  
Sbjct: 344 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 403

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+ +T+ +LI GLC   RI  A  L  + +     P V T+NTLI+   RTG    
Sbjct: 404 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 463

Query: 231 ALNLFEEMANGNGEFGVV---------CK--------------------PNTVTYNTIID 261
              +  EM     +  VV         CK                    PN   YN IID
Sbjct: 464 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
              + G  D+A  L  KMK   I+P +VTY  +I+G C  +  +EA+ +   + +  + P
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D V+++ ++   C  G +DKA  L + M   G+     TY+ LI G     +++    L+
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 643

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
             M  N  +     +N ++  Y K  +  +A  L  EML K
Sbjct: 644 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 6/248 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L     +    +    +   +   GL P++ ++  ++N FCK G++     +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNA  + ++I          +A  L  K +     P + TYN LI GLC 
Sbjct: 503 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 562

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +   ++N          P+ V+YNT+I   C  G +DKA +L  +M    I
Sbjct: 563 QSQISEAEEIINSLSNHR------LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              V TY  +I G   A   NE + L+ +MM   V P     +++++   K G   KA  
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 676

Query: 345 LLELMIWR 352
           L + M+ +
Sbjct: 677 LRKEMLQK 684



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 62/152 (40%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           PN+   I    ++ +   P + ++N+L   L           +   L++  L PD  +++
Sbjct: 530 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 589

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  C  G +     +  R+ +        T+  LI GL    R+ E   L+ K    
Sbjct: 590 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 649

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
              P    +N ++    + G+ I A +L +EM
Sbjct: 650 NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 206/401 (51%), Gaps = 6/401 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R   SP     F  L     +    + V +L   +   G   D  T ++++   
Sbjct: 60  VFDGMTRAGVSPMN-RGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 118

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ GR         R+L +   PN V +T+ I GLC    + +A  +  +      +P+V
Sbjct: 119 CEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 178

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +T+ TLI+GLC+ G T  A  LF ++   +       KPN  TY  +I G C+EG + +A
Sbjct: 179 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSY-----KPNVHTYTVMIGGYCREGKLARA 233

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           + L ++M ++ + P+  TYT++I G C    ++ A  L  +M  +G  P++ T++ ++D 
Sbjct: 234 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 293

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK GK+ +A ++L +   +G+  +  TY  LI  +C    I +A  LF  M  NGC  D
Sbjct: 294 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 353

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y +LI+ YC+ + +EE+   + + L  G+ PT  TY ++  G  ++ +   AL++F+
Sbjct: 354 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE 413

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
            M +N   AD+ TY   I GLCK   + EA  L+  + D +
Sbjct: 414 RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKR 454



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 193/405 (47%), Gaps = 10/405 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           +PP V ++      L K ++      + + +   GL P++YTH+ LI+  CK+G     F
Sbjct: 139 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 198

Query: 163 VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
            +  ++++S  + PN  T+T +I G C E ++  A  L  +      +P+  TY TLI G
Sbjct: 199 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 258

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G    A  L  +M     + G +  PN  TYN +IDG CK+G + +A ++      
Sbjct: 259 HCKGGSFDRAFELMNKMK----QEGFL--PNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 312

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + +  D +TYT +I   C       A  LF  M++ G  PD+  ++ ++   C+  +M++
Sbjct: 313 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 372

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           + +  +  +  G+ P   TY ++I GYC   +   A ++F  M  NGC  D ++Y  LI+
Sbjct: 373 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 432

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   +EEA +LY  ML K + P  VT  TL        +   A+ + D + +     
Sbjct: 433 GLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ--- 489

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +T +  +  L   G V  A    + + D  Y ++  +Y   I+
Sbjct: 490 QVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN 534



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 6/306 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             A  +F  +++     P V ++ ++ G   +         L  R+   GL P+  T++ 
Sbjct: 195 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 254

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   CK G     F ++ ++ +  F PN  T+ ++I G C + +I EA  +        
Sbjct: 255 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 314

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  TY  LI   C+ GH   AL+LF+ M   NG     C P+   Y ++I   C++ 
Sbjct: 315 LKFDKITYTILITEHCKQGHITYALDLFDRMVE-NG-----CCPDIEAYTSLISTYCQQR 368

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++++++ F K     + P   TYTS+I G+C       A R+F  M+  G   D +T+ 
Sbjct: 369 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 428

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK  ++++A  L E M+ + + P   T  TL   YC  +K   A  +   ++  
Sbjct: 429 ALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR 488

Query: 388 GCMHDV 393
             +H V
Sbjct: 489 QQVHTV 494



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 3/251 (1%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++    + G + +A ++ L+M+   +   V T   V+R       +  A+++F  M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHA 377
           V P    F  ++   C+ GK+++   LL  M WR G + +  T   ++   C   +    
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAM-WRYGFSLDNATCTVVVRSLCEKGRFKDV 127

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            + F  M   G   +VV+Y   I+  CK + V++A  +  EM+ +G+KP V T+ TL  G
Sbjct: 128 SEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 187

Query: 438 LFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           L +I   ERA +LF ++ + +    + +TY   I G C+ G +  A  L   + +   + 
Sbjct: 188 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 247

Query: 497 NIVSYNCLIDG 507
           N  +Y  LI G
Sbjct: 248 NTNTYTTLIGG 258



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/216 (20%), Positives = 78/216 (36%), Gaps = 35/216 (16%)

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            ++  F  A    EA  + +EM   G+   V T + ++    + G    A ++ + M   
Sbjct: 8   GMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRA 67

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+P    +  L+   C   K++    L  +M   G   D  +   ++   C+    ++ 
Sbjct: 68  GVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDV 127

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
              +  ML  G  P VV Y                                     +IDG
Sbjct: 128 SEFFRRMLETGTPPNVVNYTA-----------------------------------WIDG 152

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK  +V +A  +   +     + N+ ++  LIDGL
Sbjct: 153 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 206/413 (49%), Gaps = 14/413 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      D    LF+ + S  + PD++T++ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R    PN VT+T+LI       ++  A  LF       C P+V TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 225 TGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           +G    A  ++  M  GN +            G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  E   P+ + Y ++I GFC     +EA+ +F +M ++G  P+V T+S ++D L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D A ++L  M+     PN   Y  +IDG C   K D A +L   ME  GC  +V
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K   V++ L L  +M +KG  P  VTY  L         ++ A +L DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           M++ +       Y   I+G  +  F++ +L L   I ++     I +Y  LID
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNRE-FII-SLGLLDEIAENVAVPIIPAYRILID 887



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 207/430 (48%), Gaps = 23/430 (5%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           +  ML  H     V+  N L  CL     ++   S+ + + S G  PD  T+S +I   C
Sbjct: 433 YGEMLDAHVVLNKVNVSN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
              +V + F++   +  +   P+  T+T LI   C    + +A   F +     C P+V 
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY  LI+   +      A  LFE M +        C PN VTY  +IDG CK G ++KA 
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEG------CIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 274 ELFLKMK---------------DENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           +++ +M+               D NI +P++ TY +++ G C A+   EA+ L   M  +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G +P+ + +  ++D  CK GK+D+A  +   M  RG  PN YTY++LID      ++D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            K+   M  N C  +V+ Y  +I+  CK    +EA  L S M  KG  P VVTY  +  G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             +  +V++ L+L  +M     A +  TY   I+  C +G + +A +L   ++ + +  +
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845

Query: 498 IVSYNCLIDG 507
           +  Y  +I+G
Sbjct: 846 MAGYRKVIEG 855



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 206/460 (44%), Gaps = 66/460 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    DT   + + ++ +G   D YT    ++  CK GR       
Sbjct: 230 PSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA--- 286

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
           L  I +  F  + V +T +I GLC  S   EA    ++ R  +C P+V TY         
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+LI+  CR+G    A  L ++M    G+ G  C
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--C 400

Query: 250 KPNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           +P  V YN +I G+C          ++ A++ + +M D ++  + V  +++ R  C A  
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + +A  +  EMM +G  PD  T+S ++  LC   K+D A  L E M    V P+ +TY  
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LID +C    +  ARK F  M  +GC  +VV+Y  LI+ Y K + +  A  L+  MLS+G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT----------------YTYN 467
             P VVTY  L  G  +  Q+E+A +++  MR N    D                 +TY 
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +DGLCK+  V EA +L   +     E N + Y+ LIDG
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 206/440 (46%), Gaps = 32/440 (7%)

Query: 94  FDYMLRMHPSP--PPVSSFNILF-GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D++ RM  S   P V ++ IL  GCL K +       +   + + G +P     + LI+
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRK-RQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +C+ G  S+ + +L ++      P  V +  LI G+C   ++     L    + +    
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 211 DVFTY------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           D          + L   LC  G    A ++  EM +     G +  P+T TY+ +I  LC
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSK----GFI--PDTSTYSKVIGLLC 491

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
               VD A  LF +MK  ++ PDV TYT +I  FC      +A++ F EM+  G  P+VV
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++    K  KM  A+ L E+M+  G  PN  TY  LIDG+C + +I+ A +++  M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 385 ESNGCMHDV----------------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             N  + DV                 +Y  L++  CK   V+EA  L   M  +G +P  
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           + Y+ L  G  ++ +++ A  +F +M       + YTY++ ID L K   +  AL++   
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + ++    N++ Y  +IDGL
Sbjct: 732 MLENSCAPNVIIYTEMIDGL 751



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 169/366 (46%), Gaps = 15/366 (4%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           ++LI   C+ G  +     LGR+    + P+ +T+ +L++      R+  A  +  +   
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                D +T    ++ LC+ G    AL L E+      EF    K +TV Y  +I GLC+
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKE-----EF----KLDTVIYTQMISGLCE 311

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
               ++A +   +M+  +  P+VVTY  ++ G          KR+   M+ +G  P    
Sbjct: 312 ASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRI 371

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++   C++G    A +LL+ M   G  P    YN LI G C  +K+     L ++ +
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEK 431

Query: 386 SNGCMHDV------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           + G M D       V+ + L    C     E+A S+  EM+SKG  P   TY+ +   L 
Sbjct: 432 AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              +V+ A  LF+EM+ NHV  D +TY   ID  CK G + +A + F  +       N+V
Sbjct: 492 NASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVV 551

Query: 500 SYNCLI 505
           +Y  LI
Sbjct: 552 TYTALI 557



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 14/310 (4%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           ++ L     K    D    +F +++  G  P++YT+S LI+   K  R+     VL R+L
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   PN + +T +I GLC   +  EA  L +      C P+V TY  +I+G  + G   
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             L L  +M          C PN VTY  +I+  C  G +D A +L  +MK       + 
Sbjct: 794 KCLELMRQMGAKG------CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y  VI GF    ++  +  L  E+ +    P +  + +++D  CK G+++ A  L + M
Sbjct: 848 GYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 350 I----WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
                +   + + Y+  +LI+   L  K+D A +L+  M   G + ++  +  L+    +
Sbjct: 906 SSCTSYSAADKDLYS--SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963

Query: 406 NKDVEEALSL 415
               EEAL L
Sbjct: 964 INRWEEALQL 973



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 4/243 (1%)

Query: 267 GFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G  D+  E FL+ ++DE+          +IR  C    WN A      + D G +P  +T
Sbjct: 175 GGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLT 234

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++    +  ++D A  +   M   G N + YT    +   C   K    R+    +E
Sbjct: 235 YNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLC---KAGRWREALALIE 291

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 D V Y  +I+  C+    EEA+   S M S    P VVTY  L  G     Q+ 
Sbjct: 292 KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLG 351

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           R  ++   M           +N+ I   C+SG    A +L + + D   +   V YN LI
Sbjct: 352 RCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILI 411

Query: 506 DGL 508
            G+
Sbjct: 412 GGI 414



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 97/270 (35%), Gaps = 64/270 (23%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K+K  D  L +  R+      P++  ++ +I+  CK+G+    + +
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN VT+T++I G     ++ +   L  +     C P+  TY  LIN  C 
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 225 TGHTIVALNLFEEMANG----------------NGEFGV-----------VCKPNTVTYN 257
            G    A  L +EM                   N EF +           V  P    Y 
Sbjct: 824 AGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYR 883

Query: 258 TIIDGLCKEGF-------------------------------------VDKAKELFLKMK 280
            +ID  CK G                                      VDKA EL+  M 
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRL 310
                P++  +  +++G    N W EA +L
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 208/419 (49%), Gaps = 11/419 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +FD M++    P  V+ ++ L   L      D  L + + +   G+ P +YT+++ I
Sbjct: 252 AFGVFDRMVKEGCDPNSVT-YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C +        ++ R+ +    PN  T+T+LI GL    ++  A  L+ K       
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  TYN LIN LC  G    AL +F  M  G+G        NT TYN II GLC  G +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDI 424

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +KA  LF KM      P VVTY ++I G+    + N A RL   M + G +PD  T++ +
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +    K GK++ AS   + M+  G+NPN  +Y  LIDG+    K+D A  L   ME  GC
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +V SYN +IN   K     EA  +  +M+ +G+ P V+TY TL  GL    + + A K
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F +M +     + YTY++ I GLC+ G   EA      + +   E  + +Y+ L+ GL
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGL 659



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 6/382 (1%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           V      ++  G    +Y+ + L+    K   V     +  ++L S   P+ +TF +LI 
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLIN 206

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
            L  + ++ EA  + ++   +   PDVFTY +LI G CR  +  +A  +F+ M       
Sbjct: 207 ILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--- 263

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
              C PN+VTY+T+I+GLC EG VD+A ++  +M ++ I P V TYT  I   C      
Sbjct: 264 ---CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  L   M  +G +P+V T++ ++  L + GK++ A  L   M+  G+ PNT TYN LI
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +  C+  +   A K+F  ME +G + +  +YN +I   C   D+E+A+ L+ +ML  G  
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           PTVVTYNTL  G      V  A +L D M+ N    D +TYN  + G  K G +  A   
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
           F+ + +     N VSY  LIDG
Sbjct: 501 FQEMVECGLNPNPVSYTALIDG 522



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/420 (32%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  I   + +   SP   +  +++ G   +N++ D    +F R+   G  P+  T+S L
Sbjct: 216 EAELILSQIFQYDLSPDVFTYTSLILG-HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL 274

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C  GRV     +L  ++     P   T+T  I  LCA     EA  L  + +   C
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC 334

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V TY  LI+GL R G   VA+ L+ +M       G+V  PNTVTYN +I+ LC  G 
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNALINELCVGGR 388

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
              A ++F  M+      +  TY  +I+G C   D  +A  LF +M+  G  P VVT++ 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++     G ++ A+RLL+LM   G  P+ +TYN L+ G+    K++ A   F  M   G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + VSY  LI+ + K+  V+ ALSL   M   G  P V +YN +  GL + ++   A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+ D+M    +  +  TY   IDGLC++G    A ++F  +   K   N+ +Y+ LI GL
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 137/400 (34%), Positives = 204/400 (51%), Gaps = 6/400 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S N L   LAK +  +   +L+K++ ++G+ P + T + LIN   K G+V    ++L +I
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +   +P+  T+TSLI G C    +  A  +F +     C+P+  TY+TLINGLC  G  
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ EEM     E G+  +P   TY   I  LC     ++A EL  +MK     P+V
Sbjct: 285 DEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 338

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT++I G         A  L+ +M+ +G+ P+ VT++ +++ELC  G+   A ++   
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW 398

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G   NT TYN +I G CL   I+ A  LF  M   G +  VV+YNTLIN Y    +
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V  A  L   M   G +P   TYN L  G  +  ++E A   F EM    +  +  +Y  
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            IDG  K G V  AL L + + +     N+ SYN +I+GL
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 11/419 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ ++  ML+    P  V+ +N L   L     + T L +F  +   G   +  T++ +I
Sbjct: 357 AIGLYHKMLKEGLVPNTVT-YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C  G +    V+  ++L+    P  VT+ +LI G   +  +  AA L    +   CE
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCE 475

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD +TYN L++G  + G    A   F+EM     E G+   PN V+Y  +IDG  K+G V
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMV----ECGL--NPNPVSYTALIDGHSKDGKV 529

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A  L  +M++   NP+V +Y +VI G    N ++EA+++  +M++QG+ P+V+T++ +
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LC+NG+   A ++   M  R   PN YTY++LI G C   K D A +    M   GC
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGC 645

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              + +Y+TL++  C+     EA  L  +M  +G  P    Y +L +   +  +V+ ALK
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F  +           Y   I  LCK+G V EA  LF  + + ++  + + +  L+DGL
Sbjct: 706 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 209/416 (50%), Gaps = 19/416 (4%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GDI      +A+ +F+ ML+M P P  V+   ++ G L K  + +    L   +   G  
Sbjct: 422 GDIE-----KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG-NVNNAARLLDLMKENGCE 475

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD +T++ L++ F K G++         ++     PN V++T+LI G   + ++  A +L
Sbjct: 476 PDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +     C P+V +YN +INGL +      A  + ++M     E G++  PN +TY T+
Sbjct: 536 LKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV----EQGLL--PNVITYTTL 589

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGLC+ G    A ++F  M+     P++ TY+S+I G C     +EA+R    M + G 
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGC 645

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +P + T+S ++  LC+ G+  +A +L++ M  RG  P+   Y +L+  +C   ++DHA K
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +F S+E+ G    +  Y  LI   CK   VEEA +L+  ML K      + +  L  GL 
Sbjct: 706 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 765

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL---FRAIRDS 492
           +  +++  +KL   M   +   +  TY      L + G  +E+  L    + ++DS
Sbjct: 766 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDS 821



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%)

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           E+   G    + + + ++ +L K   ++ A  L + M+  G+ P+  T+NTLI+      
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K+  A  +   +       DV +Y +LI  +C+N++++ A  ++  M+ +G  P  VTY+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  GL    +V+ AL + +EM    +    YTY   I  LC      EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 493 KYELNIVSYNCLIDGL 508
               N+ +Y  LI GL
Sbjct: 333 GCRPNVQTYTALISGL 348



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 404 CKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           C+N++ +       +E+   G   ++ + NTL + L +   VE A  L+ +M  + +   
Sbjct: 138 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             T+N  I+ L K G V EA  +   I       ++ +Y  LI G
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILG 242


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 232/484 (47%), Gaps = 66/484 (13%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M +     P + S N L   L KN    T   +++++   G+ PD++  SI++
Sbjct: 175 ALYVFDNMGKC-GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 150 NCFCKMGRVS-------------------------HGFVVLGRILRS----------CFT 174
           N FCK G+V                          +G+V LG +  +            +
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 175 PNAVTFTSLIKGLCAESRIMEA-AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            N VT+T LIKG C + ++ EA   L       A  PD   Y  LI+G CRTG    A+ 
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 234 LFEEM---------------ANG---NGEF----GVVC-------KPNTVTYNTIIDGLC 264
           L +EM                NG    GE     GV+        KP++ +YNT++DG C
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +EG   +A  L  KM  E I P V+TY ++++G C    +++A +++  MM +GV PD V
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            +S ++D L K    + AS L + ++ RG   +  T+NT+I G C   K+  A ++F  M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  GC  D ++Y TLI+ YCK  +V +A  +   M  + I P++  YN+L  GLF+  ++
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
                L  EM    +  +  TY   IDG CK G + +A   +  + ++    NI+  + +
Sbjct: 594 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 505 IDGL 508
           + GL
Sbjct: 654 VSGL 657



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 227/481 (47%), Gaps = 62/481 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D ML+     P V ++N L   L +   +D  L ++  +   G+ PD   +S 
Sbjct: 419 SEAFNLCDKMLQ-EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   KM        +   IL   FT + +TF ++I GLC   +++EA  +F K +   
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 208 CEPDVFTYNTLINGLCRTGHTIVAL-----------------------NLFE-----EMA 239
           C PD  TY TLI+G C+  +   A                         LF+     E+ 
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597

Query: 240 NGNGEFGVV-CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
           +   E G+    PN VTY  +IDG CKEG +DKA   + +M +  ++ +++  ++++ G 
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDV--------------------------------VTF 326
                 +EA  L  +M+D G  PD                                 + +
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++ +  LCK GK+D A R   ++  +G  P+ +TY TLI GY     +D A +L   M  
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + ++V+YN LIN  CK+++V+ A  L+ ++  KG+ P VVTYNTL  G  +I  ++ 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A KL D+M    ++    TY+  I+GLCK G +  +++L   +  +  +  ++ Y  L+ 
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 507 G 507
           G
Sbjct: 898 G 898



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 196/389 (50%), Gaps = 7/389 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V ++ +L     K    D    + + +   A L PD   + +LI+ +C+ G++     +L
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
             +LR     N     SLI G C    I EA  + T+   +  +PD ++YNTL++G CR 
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           GHT  A NL ++M     E      P  +TYNT++ GLC+ G  D A +++  M    + 
Sbjct: 416 GHTSEAFNLCDKMLQEGIE------PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 469

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PD V Y++++ G     ++  A  L+ +++ +G     +TF+ ++  LCK GKM +A  +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + M   G +P+  TY TLIDGYC    +  A K+  +ME       +  YN+LI+   K
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 589

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           ++ + E   L +EM  +G+ P +VTY  L  G  +   +++A   + EM  N ++A+   
Sbjct: 590 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            +  + GL + G + EA  L + + D  +
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKMVDHGF 678



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 61/478 (12%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD--- 141
           + P  +L  F ++ +     P V S+  L   L++ + YD   +   +L     F D   
Sbjct: 80  LNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGN 139

Query: 142 --------IYTH--------SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
                   +Y           +++  + + G   +   V   + +    P+  +  SL+ 
Sbjct: 140 VIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
            L        A  ++ +       PDVF  + ++N  C+ G    A    ++M N     
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----L 255

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           GV  +PN VTY+++I+G    G V+ AK +   M ++ ++ +VVTYT +I+G+C     +
Sbjct: 256 GV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 306 EAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           EA+++   M ++  + PD   + V++D  C+ GK+D A RLL+ M+  G+  N +  N+L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+GYC   +I  A  +   M       D  SYNTL++ YC+     EA +L  +ML +GI
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY-------------------- 464
           +PTV+TYNTL  GL  +   + AL+++  M +  VA D                      
Sbjct: 434 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAST 493

Query: 465 ---------------TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                          T+N  I GLCK G ++EA E+F  ++D     + ++Y  LIDG
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 190/407 (46%), Gaps = 61/407 (14%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN +   L K         +F ++   G  PD  T+  LI+ +CK   V   F V G +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY------------- 215
            R   +P+   + SLI GL    R++E   L T+  +    P++ TY             
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 216 ----------------------NTLINGLCRTGHTIVALNLFEEMAN------------G 241
                                 +T+++GL R G    A  L ++M +             
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 242 NGEFGVV----------CK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           +  +  +          CK    PN + YN  I GLCK G VD A+  F  +  +   PD
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             TY ++I G+  A + +EA RL  EM+ +G+ P++VT++ +++ LCK+  +D+A RL  
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +  +G+ PN  TYNTLIDGYC    +D A KL   M   G    VV+Y+ LIN  CK+ 
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           D+E ++ L ++M+  G+   ++ Y TL  G     ++++  KL+D M
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 188/407 (46%), Gaps = 47/407 (11%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  + +  +   CK+S  G        +A  +   M R  P  P +  +N L   L K++
Sbjct: 541 DGITYRTLIDGYCKASNVG--------QAFKVKGAMER-EPISPSIEMYNSLISGLFKSR 591

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
               V  L   +   GL P+I T+  LI+ +CK G +   F     +  +  + N +  +
Sbjct: 592 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651

Query: 182 SLIKGLCAESRIMEAAALFTK---------HRVF-------------------ACE---- 209
           +++ GL    RI EA  L  K         H  F                   +C+    
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 711

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+   YN  I GLC+TG    A   F  ++      G V  P+  TY T+I G    G V
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK----GFV--PDNFTYCTLIHGYSAAGNV 765

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A  L  +M    + P++VTY ++I G C + + + A+RLF ++  +G+ P+VVT++ +
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK G MD A +L + MI  G++P+  TY+ LI+G C    I+ + KL   M   G 
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
              ++ Y TL+  Y ++ ++++   LY  M  + +  T +++  + L
Sbjct: 886 DSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQVDL 932


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 202/413 (48%), Gaps = 17/413 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +   SLF+ +   G+ P +YT++ILI+ FCK G +      
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L    TPN VT+T+LI       ++  A  LF    +  C+P+V TY  LI+G C+
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAK 273
            G    A  ++  M  G+ E   + K           PN +TY  ++DGLCK   V +A 
Sbjct: 578 AGQIEKACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           EL   M      P+ + Y +VI GFC      +A+ +F +M ++G  P++ T+S  +D L
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D   ++L  M+     PN   Y  ++DG C   K D A KL + ME  GC  +V
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K+  +E+ L L+ +M SKG  P  +TY  L         ++ A KL DE
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 454 MRRNHVAADTYTYNNFIDGLCKS-----GFVLEALELFRAIRDSKYELNIVSY 501
           M++ +      ++   I+G  +      G + E  E      DS Y + I +Y
Sbjct: 817 MKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNY 869



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 195/409 (47%), Gaps = 22/409 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    +   +   G  PD  T+S +I   C   +V   F +   + R+   P
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A   F +     C P+V TY  LI+   +     VA  LF
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK--------------D 281
           E M          CKPN VTY  +IDG CK G ++KA +++ +M+              D
Sbjct: 554 EMMLLEG------CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLD 607

Query: 282 EN--INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            N    P+V+TY +++ G C AN   EA  L   M+  G +P+ + +  ++D  CK GK+
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
             A  +   M  RG +PN YTY++ ID     +++D   K+   M  N C  +VV Y  +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           ++  CK    +EA  L  +M  KG  P VVTY  +  G  +  ++E+ L+LF +M     
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           A +  TY   I+  C +G + EA +L   ++ + +  +I+S+  +I+G 
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF 836



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 200/433 (46%), Gaps = 20/433 (4%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD +       P    +N +   L +   ++  + +  R+ S+   P++ T+ IL++   
Sbjct: 266 FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCL 325

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G++     +L  ++     PN   F SLI   C       A  LF K     C+P   
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385

Query: 214 TYNTLINGLCRTGHTIVA--LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
            YN  I  +C       +  L+L E+  +   + GVV   N V  +     LC  G  D+
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVL--NKVNVSNFARCLCGAGKFDQ 443

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ++  +M  +   PD  TY+ VI   C A+   +A  LF EM   G+ P V T+++++D
Sbjct: 444 AFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILID 503

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK G + +A +  + M+ +G  PN  TY  LI  Y    ++  A +LF  M   GC  
Sbjct: 504 SFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP 563

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEM--------LSKGIK--------PTVVTYNTLF 435
           +VV+Y  LI+ +CK   +E+A  +Y+ M        + K  K        P V+TY  L 
Sbjct: 564 NVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALV 623

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL + ++V+ A +L D M  +    +   Y+  IDG CK G + +A E+F  + +  Y 
Sbjct: 624 DGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYS 683

Query: 496 LNIVSYNCLIDGL 508
            N+ +Y+  ID L
Sbjct: 684 PNLYTYSSFIDCL 696



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 200/461 (43%), Gaps = 65/461 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +++N L     +    DT   + + + S     D YT S      CK G+    F +
Sbjct: 209 PSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDL 268

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
           +       F P+ V +  ++ GLC  S   EA  +  + R  +C P+V TY         
Sbjct: 269 IDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+LI+  C++     A  LF++M          C
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG------C 380

Query: 250 KPNTVTYNTIIDGLC------KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           +P  + YN  I  +C          +D  ++ + +M D  +  + V  ++  R  C A  
Sbjct: 381 QPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGK 440

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           +++A ++  EMM +G  PD  T+S ++  LC   K++KA  L E M   G+ P+ YTY  
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LID +C    I  ARK F  M   GC  +VV+Y  LI+ Y K K +  A  L+  ML +G
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG 560

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD----------------TYTYN 467
            KP VVTY  L  G  +  Q+E+A +++  MR +  ++D                  TY 
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DGLCK+  V EA EL   +     E N + Y+ +IDG 
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGF 661



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 191/441 (43%), Gaps = 81/441 (18%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD ML      P V ++  L     K K       LF+ +   G  P++ T++ LI+  C
Sbjct: 518 FDEMLH-KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 154 KMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           K G++     +  R+                  +C  PN +T+ +L+ GLC  +R+ EA 
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN----------------- 240
            L        CEP+   Y+ +I+G C+ G    A  +F +M+                  
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 241 -GNGEFGVV-----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             +    +V           C PN V Y  ++DGLCK G  D+A +L LKM+++  NP+V
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT++I GF  +    +   LF +M  +G  P+ +T+ V+++  C NG +D+A +LL+ 
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 349 M--------------IWRGVN-------------------PNTYTYNTLIDGYCLTDKID 375
           M              I  G +                   P    Y  LID Y    +++
Sbjct: 817 MKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLE 876

Query: 376 HARKLF--VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            A  L   +S   +  + +   Y +LI        V++AL LY+ M+SK + P +     
Sbjct: 877 VALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVH 936

Query: 434 LFLGLFEIHQVERALKLFDEM 454
           L  GL ++ + + AL+L D +
Sbjct: 937 LIKGLIKVDKWQEALQLSDSI 957



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 153/369 (41%), Gaps = 59/369 (15%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           L++  C       A     + + F  +P   TYN LI    R      A  +  EM +  
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS-- 239

Query: 243 GEFGVVCKPNTVT---YNTIIDGLCKEGF--VDKAKELFLKMKDENINPDVVTYTSVIRG 297
             +  V    T++   Y+    G C+E F  +D+A         E+  PD V Y  ++ G
Sbjct: 240 --YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA---------EDFVPDTVFYNRMVSG 288

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C A+ + EA  +   M      P+VVT+ +++    + G++ +  R+L +MI  G  PN
Sbjct: 289 LCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPN 348

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD--------- 408
              +N+LI  YC +    +A KLF  M   GC    + YN  I   C N++         
Sbjct: 349 REIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDL 408

Query: 409 --------------------------------VEEALSLYSEMLSKGIKPTVVTYNTLFL 436
                                            ++A  +  EM+ KG  P   TY+ +  
Sbjct: 409 VEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIG 468

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L +  +VE+A  LF+EM+RN +    YTY   ID  CK+G + +A + F  +       
Sbjct: 469 FLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528

Query: 497 NIVSYNCLI 505
           N+V+Y  LI
Sbjct: 529 NVVTYTALI 537



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 2/218 (0%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N ++   C+ G+ + A E   ++KD    P   TY ++I+ F  A+  + A  +  EM+ 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
                D  T S     LCK GK  +A  L++        P+T  YN ++ G C     + 
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  +   M S+ C+ +VV+Y  L++   +   +     + S M+++G  P    +N+L  
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
              +      A KLF +M +         YN FI  +C
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVC 395



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 2/112 (1%)

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N L+   C+N     AL     +   G KP+  TYN L        +++ A  +  EM  
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                D YT + F   LCK G   EA +L     D  +  + V YN ++ GL
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGL 289


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 208/398 (52%), Gaps = 15/398 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   LA+    D +  L+  +    +  DIYT +++IN +CKMG V      + +++
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP--DVFTYNTLINGLCRTGH 227
           ++  +P+  T TS I G C    +  A       RVF   P  +  +YN LI+GLC  G 
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSA------FRVFEEMPNRNEVSYNQLIHGLCEAGR 273

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A++LF  M +        C PN  TY  +I GLC++  V KA  L  +M + N+ PD
Sbjct: 274 IDEAVSLFVRMKDD------CCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPD 326

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           ++TY S+I G C A   + A RL   M ++G+ PD  T+   +D LCK+ ++++A RL +
Sbjct: 327 LITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFD 386

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +   GV+ N   Y+ LIDGYC   K+D A  LF  M S  C  +  ++N LI+  C   
Sbjct: 387 SLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAG 446

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           +++EALSL+ +M+  G+KPTV T+N L   + +    + A K   +M  +       TYN
Sbjct: 447 NLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYN 506

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            FI+  C +G V EA ++   +++     +  +Y  LI
Sbjct: 507 AFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 196/402 (48%), Gaps = 11/402 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + +FN++     K            ++  AGL PD +T +  I  +C+   V   F    
Sbjct: 192 IYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAF---- 247

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+       N V++  LI GLC   RI EA +LF + +   C P+V+TY  LI GLCR  
Sbjct: 248 RVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK- 306

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A+ L +EM   N        P+ +TYN++I G C+ G +D A  L   MK+  + P
Sbjct: 307 NVHKAMGLLDEMLERN------LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP 360

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D  TY   I   C +N   EA+RLF  + ++GV  +V+ +SV++D  CK GK+D+A  L 
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M+ +  +PN YT+N LI G C    +  A  LF  M   G    V ++N LI    K 
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D ++A     +M+S G KP   TYN          +V+ A  +  +M+   V  D +TY
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + I    K G    A ++ +++ D+  E +  ++  LI  L
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL 582



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 195/426 (45%), Gaps = 36/426 (8%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+N L   L +    D  +SLF R+     +P++YT++ LI   C+   V     +L  +
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEM 318

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L     P+ +T+ SLI G C    +  A  L +  +     PD  TY   I+ LC++   
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LF+ +     E GV    N + Y+ +IDG CK G VD+A  LF KM  +N +P+ 
Sbjct: 379 EEARRLFDSLT----EEGV--SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNA 432

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            T+ ++I G C A +  EA  LF +M+  G++P V TF++++  + K G  D A + L+ 
Sbjct: 433 YTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQK 492

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G  P   TYN  I+ YC   K+  A  + V M+  G   D  +Y +LI  Y K   
Sbjct: 493 MMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGL 552

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE---------------------------- 440
              A  +   M     +P+  T+ +L   LF+                            
Sbjct: 553 TYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMW 612

Query: 441 -IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
            + + +  ++LF+EM ++    D+  Y   I G+CK   +  AL+L   ++      + +
Sbjct: 613 KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEM 672

Query: 500 SYNCLI 505
            +N +I
Sbjct: 673 VFNAVI 678



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 185/385 (48%), Gaps = 12/385 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M++   SP   +S + + G   ++K  D+   +F+ + +     +  +++ LI+  C+ G
Sbjct: 218 MIQAGLSPDYFTSTSFILG-YCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAG 272

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           R+     +  R+   C  PN  T+T+LIKGLC ++ + +A  L  +       PD+ TYN
Sbjct: 273 RIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYN 331

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           +LI G CR GH   A  L   M     E G+V  P+  TY   ID LCK   V++A+ LF
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMK----ERGLV--PDQRTYGCFIDFLCKSNRVEEARRLF 385

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             + +E ++ +V+ Y+ +I G+C     +EA  LF +M+ +   P+  TF+ ++  LC  
Sbjct: 386 DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSA 445

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G + +A  L + M+  G+ P  YT+N LI         D A K    M S+G      +Y
Sbjct: 446 GNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTY 505

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N  I  YC    V+EA  +  +M  +G+ P   TY +L     ++     A  +   M  
Sbjct: 506 NAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFD 565

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLE 481
                  +T+ + I  L    +V+E
Sbjct: 566 ADCEPSHHTFLSLIKQLFDKRYVVE 590



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 192/428 (44%), Gaps = 39/428 (9%)

Query: 114 FGC----LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +GC    L K+   +    LF  L   G+  ++  +S+LI+ +CK+G+V     +  ++L
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKML 424

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
               +PNA TF +LI GLC+   + EA +LF +      +P V+T+N LI  + + G   
Sbjct: 425 SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFD 484

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A    ++M + +GE     KP   TYN  I+  C  G V +A+++ ++MK+E + PD  
Sbjct: 485 DAHKCLQKMMS-SGE-----KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF 538

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL---------------- 333
           TYTS+I+ +        A  +   M D   +P   TF  ++ +L                
Sbjct: 539 TYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVE 598

Query: 334 -------------CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
                         K  + D    L E M   G  P++  Y  LI G C  + +  A KL
Sbjct: 599 SVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKL 658

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              M+  G     + +N +I+  CK +   EA ++  +M+  G  P +    TL  GL+E
Sbjct: 659 LDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYE 718

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             + ER   +F ++R      D   +   IDG+ K G V E  +LF  +  +    +  +
Sbjct: 719 EGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRT 778

Query: 501 YNCLIDGL 508
           Y+ L   L
Sbjct: 779 YSILTQKL 786



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 5/252 (1%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN ++  L + G VD+  +L+ +M +E ++ D+ T+  +I  +C      EAK+   +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+ PD  T +  +   C++  +D A R+ E M     N N  +YN LI G C   +ID
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM----PNRNEVSYNQLIHGLCEAGRID 275

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LFV M+ + C  +V +Y  LI   C+ K+V +A+ L  EML + + P ++TYN+L 
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G      ++ A +L   M+   +  D  TY  FID LCKS  V EA  LF ++ +    
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 496 LNIVSYNCLIDG 507
            N++ Y+ LIDG
Sbjct: 395 ANVIMYSVLIDG 406


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 196/377 (51%), Gaps = 9/377 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S N L   L K      +  +++ +    +  ++ + +I++N  CK+G+++    V+  +
Sbjct: 122 SCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDM 181

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRI---MEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
                +PN +T+ +LI G C   RI    +A A+  +       P+  TYN LI+G C+ 
Sbjct: 182 KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKD 241

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
            +   A+ +F EM           +PN VTYN +I+GLC +G VD+A  L  +M   ++ 
Sbjct: 242 ENVSGAMRVFGEMQRQG------LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLE 295

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+VVT+  +I GFC     NEA  LF +M  QGV P+ +T++ ++D  CK+G+M+ A  L
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
             +MI RG+ P   TYN LI G C    +  AR L   M S     DVV+YN LI+  CK
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
             +  +A+ L  EM  KG+ P+ VTYNTL  G      +  AL +   M R    A+  T
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475

Query: 466 YNNFIDGLCKSGFVLEA 482
           +N  I G C  G + +A
Sbjct: 476 HNVLIKGFCLKGRLEDA 492



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 200/382 (52%), Gaps = 11/382 (2%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           FKR    G    + + + L++   K         V   +++     N ++F  ++ GLC 
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC---RTGHTIVALNLFEEM-ANGNGEF 245
             ++  A  +    +V+   P+V TYNTLI+G C   R G    A  + +EM A G    
Sbjct: 168 VGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG---- 223

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
             +C PN VTYN +IDG CK+  V  A  +F +M+ + + P+VVTY  +I G C     +
Sbjct: 224 --IC-PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  L  +M+   ++P+VVT +V+++  CKN  +++A  L   M  +GV+PN  TY TLI
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           D YC   +++ A  L+  M   G   +V +YN LI   C+  DV+ A SL +EM+SK + 
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS 400

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
             VVTYN L   L +  +  +A+KL DEM    +     TYN  +DG C+ G +  AL +
Sbjct: 401 ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIV 460

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
              +     + N+V++N LI G
Sbjct: 461 RTRMERKGKQANVVTHNVLIKG 482



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 198/376 (52%), Gaps = 9/376 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF---V 163
           V SFNI+   L K    +    + + +   G+ P++ T++ LI+ +CKMGR+   +    
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  ++     PN VT+  LI G C +  +  A  +F + +     P+V TYN LINGLC
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A+ L ++M + + E      PN VT+N +I+G CK   V++A  LF  M+ + 
Sbjct: 275 SDGKVDEAVALRDQMVSSDLE------PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           ++P+ +TYT++I  +C      +A  L+  M+D+G+ P+V T++ ++  LC+ G +  A 
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  M+ + ++ +  TYN LID  C   +   A KL   M   G     V+YNTL++ Y
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+  ++  AL + + M  KG +  VVT+N L  G     ++E A  L +EM    +  + 
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNR 508

Query: 464 YTYNNFIDGLCKSGFV 479
            TY    + + + GFV
Sbjct: 509 TTYEIIKEEMMEKGFV 524



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 178/339 (52%), Gaps = 9/339 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F  N++    L+       +I+     F +   +  +  + + N L++GL +        
Sbjct: 81  FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            ++ EM     E       N +++N +++GLCK G +++A ++   MK   ++P+V+TY 
Sbjct: 141 FVYREMIKRKIEL------NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYN 194

Query: 293 SVIRGFCYANDWNE---AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           ++I G+C      +   A  +  EM+ +G+ P+ VT+++++D  CK+  +  A R+   M
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ PN  TYN LI+G C   K+D A  L   M S+    +VV++N LIN +CKNK V
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            EA++L+++M  +G+ P  +TY TL     +  ++E A  L++ M    +  +  TYN  
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I GLC+ G V  A  L   +   K   ++V+YN LID L
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 22/324 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++NIL     K+++    + +F  +   GL P++ T++ILIN  C  G+V     +
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ S   PN VT   LI G C    + EA  LF        +P+  TY TLI+  C+
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L+  M +  G F     P   TYN +I GLC++G V  A+ L  +M  + +
Sbjct: 346 DGRMEDAFALYNMMID-RGIF-----PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKL 399

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + DVVTY  +I   C   +  +A +L  EM ++G+ P  VT++ +MD  C+ G +  A  
Sbjct: 400 SADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALI 459

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M  +G   N  T+N LI G+CL  +++ A  L   M   G + +  +Y        
Sbjct: 460 VRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI------ 513

Query: 405 KNKDVEEALSLYSEMLSKGIKPTV 428
                     +  EM+ KG  P +
Sbjct: 514 ----------IKEEMMEKGFVPDI 527



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 131/250 (52%), Gaps = 7/250 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M+      P V + N+L     KNK  +  ++LF  +   G+ P+  T++ 
Sbjct: 280 DEAVALRDQMVS-SDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ +CK GR+   F +   ++     P   T+  LI GLC +  +  A +L  +     
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              DV TYN LI+ LC+ G +  A+ L +EM      F     P+ VTYNT++DG C+EG
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEM------FEKGLNPSHVTYNTLMDGYCREG 452

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A  +  +M+ +    +VVT+  +I+GFC      +A  L  EM+++G+ P+  T+ 
Sbjct: 453 NLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE 512

Query: 328 VIMDELCKNG 337
           +I +E+ + G
Sbjct: 513 IIKEEMMEKG 522


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 198/383 (51%), Gaps = 9/383 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           ++ + +  AG  PD+ +H +LI  F K G    G   L R+L +   PNA+ + +LI  L
Sbjct: 15  AIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCL 74

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    + EA + + K     C P+V +YN +I+G C+  +   AL    EM     E G 
Sbjct: 75  CKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREME----ELGH 129

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P    Y++I+   CK G V KA ++F +M  +   PD+V +  ++ G   A   +EA
Sbjct: 130 --PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEA 187

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           + LF  M  +G +PDVVT++ ++  LCK  K+D+A  LLE M    V+P   TY TLID 
Sbjct: 188 RELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDH 247

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNT--LINWYCKNKDVEEALSLYSEMLSKGIK 425
            C   ++  A ++F  M    C     +Y+   LIN  CK +   EA  ++ EM  +GI 
Sbjct: 248 LCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGIS 307

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           PTVVTYNTL  GL    +++ A++L   M     A + +TY   I  LCK+  V EA +L
Sbjct: 308 PTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKL 367

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
             A+RD  +  ++  +  L+  L
Sbjct: 368 LSAMRDKGFVPSLKIWEVLLSRL 390



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 196/408 (48%), Gaps = 13/408 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S  +L     K+  +    S   R+  AGLFP+   ++ LI+C CK G ++     
Sbjct: 27  PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESY 86

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+ + C  PN V++  +I G C    I +A A   +       P    Y++++   C+
Sbjct: 87  LKRMPQHC-APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           TG+   A+++F EM A G       C+P+ V +N ++ GL +   + +A+ELF  M    
Sbjct: 146 TGNVSKAMDVFAEMPAKG-------CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PDVVTY ++I G C     +EA  L   M  + V P  VT++ ++D LCK  ++ +A 
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258

Query: 344 RLLELMIWRGVNPNT---YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            + E M   G  P T   Y+   LI+G C   +   A+++F  M   G    VV+YNTL+
Sbjct: 259 EVFEKMA-EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 317

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
                   +++A+ L   ML +   P + TY  L   L +  QVE A KL   MR     
Sbjct: 318 EGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFV 377

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                +   +  L ++G + +A EL++ +     +  + S N L+DG+
Sbjct: 378 PSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGI 425



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 187/401 (46%), Gaps = 10/401 (2%)

Query: 96  YMLRM-HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           Y+ RM     P V S+NI+     K ++ +  L+  + +   G  P  + +S ++  FCK
Sbjct: 86  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
            G VS    V   +      P+ V F  L+ GL    +I EA  LF       C+PDV T
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YNT+I GLC+      A+ L E M   +        P  VTY T+ID LCK   + +A E
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFVTYTTLIDHLCKFARLQQAYE 259

Query: 275 LFLKMKDENINPDVVTYTSVI--RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           +F KM +         Y+ +I   G C A    EAK +F EM  +G+ P VVT++ +++ 
Sbjct: 260 VFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L    K+  A  L   M+ +   PN +TY  LI   C TD+++ A KL  +M   G +  
Sbjct: 320 LLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 379

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +  +  L++   +   +++A  LY EM     +  V + N L  G+     V+ A     
Sbjct: 380 LKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLK 439

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA-IRDS 492
           +M    +  D +TY+  + GLC  G   +A +L    +RD 
Sbjct: 440 QMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 1/249 (0%)

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I  L +   V +A+ +  +MK    +PDV ++  +IRGF  +  +         M++ G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P+ + ++ ++  LCK G + +A   L+ M  +   PN  +YN +IDGYC    I+ A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
               ME  G      +Y++++  +CK  +V +A+ +++EM +KG +P +V +N L  GL+
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              ++  A +LF  M       D  TYN  I GLCK   + EA+ L   ++        V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 500 SYNCLIDGL 508
           +Y  LID L
Sbjct: 240 TYTTLIDHL 248


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 198/407 (48%), Gaps = 18/407 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N +   LA     D     F  +   G  PD+   + LI+ FCK G+   G  +
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP----DVFTYNTLIN 220
           L + L+  F P+   +TS+I G C      +A  L T +   A  P    DV +Y T+I 
Sbjct: 65  LNQALKR-FRPDVFLYTSVIHGYC------KAGDLDTGY-FRAVTPKASLDVISYTTVIK 116

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GL  +     A  LFEE+          C PN V Y  +IDGL K G ++   + F +M 
Sbjct: 117 GLADSKRIDEACELFEELKTAG------CSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
             +  P   TYT VI G C A    +A ++F +M+ +G  PD +T++ ++D   K  KMD
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A +LL++M+ +G  P   TY +++ G+C  D I+ A+++   M   GC   +  + +L+
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           ++Y      EEA  + +EM ++G  P V+ Y +L   LF   +V  A  +FD M     A
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            D  TY   I    K G V  A E+   +  S    +  +YN L+DG
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 42/438 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+  +   LA +K  D    LF+ L +AG  P++  ++ +I+   K GR+  G     
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  S   P   T+T +I GLC    + +A  +F +     C PD  TY TLI+G  +  
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L + M     E      P  VTY +I+ G CK   +++AKE+  +M++    P
Sbjct: 228 KMDEARKLLDVMLTKGPE------PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 281

Query: 287 -----------------------------------DVVTYTSVIRGFCYANDWNEAKRLF 311
                                              DV+ YTS+I          EA+ +F
Sbjct: 282 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 341

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M+++G  PD +T+  I+    K G ++ A  +LELM   GV P+ + YN+L+DGY   
Sbjct: 342 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 401

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVT 430
           +++D A  ++  M ++G   + V++N L++   K+   + A SL+ EML K  + PT+V+
Sbjct: 402 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVS 461

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y  L  GL +  +V  A   F EM    +  + +TY + I  L K+G + EA +L   + 
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMV 521

Query: 491 DSKYELNIVSYNCLIDGL 508
                 ++ +Y+ LI GL
Sbjct: 522 KLGVNPDVQAYSALITGL 539



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 182/394 (46%), Gaps = 8/394 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F+ M++    P  ++ +  L    +K    D    L   + + G  P   T+  +
Sbjct: 196 DACKVFEQMVQKGCVPDTIT-YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 254

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ FCK+  ++    V+ ++      P    FTSL+    ++ R  EA  + T+     C
Sbjct: 255 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 314

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV  Y +LI+ L  TG    A ++F+ M          C P+ +TY TII    K G 
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG------CAPDALTYGTIIQNFSKIGN 368

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A E+   M    + PD   Y S++ G+      ++A  ++  M+  G++P+ VTF+V
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428

Query: 329 IMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +M  L K+GK D+A  L + M+ +  V P   +Y  LIDG     ++  A   F  M   
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR 488

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + +  +Y +LI    K   + EA  L  +M+  G+ P V  Y+ L  GL +   V+ A
Sbjct: 489 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 548

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
             +F EM +   A +  TY     G   +G  L+
Sbjct: 549 WDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 13/372 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D ML   P P  V+  +I+ G   K    +    +  ++   G  P ++  + 
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHG-FCKLDMINEAKEVIAQMRERGCEPGLFIFTS 288

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +   GR    + VL  +      P+ + +TSLI  L +  R+ EA  +F       
Sbjct: 289 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 348

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD  TY T+I    + G+   A  + E MA           P+   YN+++DG  K  
Sbjct: 349 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG------VGPDCFAYNSLMDGYVKLE 402

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTF 326
            VD+A  ++ +M    I P+ VT+  ++ G       + A  LF EM++ + V P +V++
Sbjct: 403 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSY 462

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D L K G++ +A    + MI RG+ P  +TY +LI       +I  A+KL   M  
Sbjct: 463 TILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 522

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   DV +Y+ LI     +  V+ A  ++ EM+ +G  P  VTY  L  G        R
Sbjct: 523 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF---RAAGR 579

Query: 447 ALKLFDEMRRNH 458
           AL L  E  + H
Sbjct: 580 ALDL--EAVKQH 589



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 147/333 (44%), Gaps = 39/333 (11%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             CEP + +YNT+I+GL        A   F  M + NG     C+P+ + + T+I G CK
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NG-----CEPDVIAFTTLIHGFCK 54

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW--------------------- 304
            G      +L L    +   PDV  YTSVI G+C A D                      
Sbjct: 55  AGQPQVGHKL-LNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTT 113

Query: 305 -----------NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
                      +EA  LF E+   G  P+VV ++ ++D L K G+++   +  E M    
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             P   TY  +IDG C    +  A K+F  M   GC+ D ++Y TLI+ + K   ++EA 
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L   ML+KG +PT VTY ++  G  ++  +  A ++  +MR        + + + +   
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              G   EA ++   +       +++ Y  LID
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 326



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 12/264 (4%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C+P  V+YNT+I GL     +D+A + F  M D    PDV+ +T++I GFC A       
Sbjct: 3   CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH 62

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP----NTYTYNTL 364
           +L  + + +  +PDV  ++ ++   CK G +D          +R V P    +  +Y T+
Sbjct: 63  KLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG-------YFRAVTPKASLDVISYTTV 114

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I G   + +ID A +LF  +++ GC  +VV+Y  +I+   K   +E+ L  + EM     
Sbjct: 115 IKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            PT  TY  +  GL +   +  A K+F++M +     DT TY   IDG  K+  + EA +
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   +     E   V+Y  ++ G 
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGF 258



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 31/222 (13%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G +P +V+++ ++  L    KMD+A +    MI  G  P+   + TLI G+C   +    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 378 RK--------------LFVSMESNGCMH-----------------DVVSYNTLINWYCKN 406
            K              L+ S+    C                   DV+SY T+I     +
Sbjct: 62  HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K ++EA  L+ E+ + G  P VV Y  +  GL +  ++E  LK F+EM  +       TY
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              IDGLCK+  + +A ++F  +       + ++Y  LIDG 
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 223


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 211/419 (50%), Gaps = 8/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL  FD M    PSP  V+ + +L     KN +      L+ ++ +  + P ++  + LI
Sbjct: 368 ALEFFDKMNENGPSPNRVT-YAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLI 426

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
             F K+        +    + +C   N  T+ SL+  LC E ++ EA  L+ K       
Sbjct: 427 RGFLKVESREEASKLFDEAV-ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P   +YN++I G CR G+  +A ++F +M +         KPN +TY+ ++DG  K G  
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG------LKPNVITYSILMDGYFKNGDT 539

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A  +F +M DENI P   TY   I G C     +EA+ +  + +++G  P  +T++ I
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           MD   K G +  A      M   GV+PN  TY TLI+G+C  +  D A K+   M + G 
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D+ +Y  LI+ +CK +D+E A  L+SE+L  G+ P  V YN+L  G   ++ +E AL 
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L   M    ++ D  TY   IDGL K G ++ AL+L+  +       +I+ Y  LI+GL
Sbjct: 720 LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGL 778



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 204/399 (51%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L   L K        +L++++   GL P   +++ +I   C+ G +     V   +
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L     PN +T++ L+ G         A  +F +       P  FTYN  INGLC+ G T
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A ++ ++      E G V  P  +TYN+I+DG  KEG V  A   + +M +  ++P+V
Sbjct: 575 SEAQDMLKKFV----EKGFV--PVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNV 628

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TYT++I GFC  N+ + A ++  EM ++G++ D+  +  ++D  CK   ++ AS L   
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G++PN+  YN+LI GY   + ++ A  L   M   G   D+ +Y TLI+   K   
Sbjct: 689 LLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGR 748

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  AL LYSEM +KGI P ++ Y  L  GL    Q+E A K+  EM R+ +  +   YN 
Sbjct: 749 LVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNA 808

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G  K+G + EA  L   + D     N  +Y+ LI+G
Sbjct: 809 LIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 199/404 (49%), Gaps = 9/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F  + G   K  +    L L   + S G+  ++   + L+  +CK  ++      
Sbjct: 312 PSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEF 371

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++  +  +PN VT+  LI+  C    + +A  L+T+ +     P VF  N+LI G  +
Sbjct: 372 FDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCK-PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                 A  LF+E         V C   N  TYN+++  LCKEG + +A  L+ KM D+ 
Sbjct: 432 VESREEASKLFDE--------AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P  V+Y S+I G C   + + A  +F +M+D G++P+V+T+S++MD   KNG  + A 
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            + + M+   + P+ +TYN  I+G C   +   A+ +       G +   ++YN++++ +
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K   V  AL+ Y EM   G+ P V+TY TL  G  + +  + ALK+ +EMR   +  D 
Sbjct: 604 IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             Y   IDG CK   +  A  LF  + D     N V YN LI G
Sbjct: 664 AAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 192/390 (49%), Gaps = 7/390 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  ++  ML    +P  VS  +++ G   +  + D   S+F  +   GL P++ T+SI
Sbjct: 470 SEATTLWQKMLDKGLAPTKVSYNSMILGH-CRQGNLDMAASVFSDMLDCGLKPNVITYSI 528

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ + K G   + F V  R++     P+  T+   I GLC   R  EA  +  K     
Sbjct: 529 LMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKG 588

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   TYN++++G  + G    AL  + EM     E GV   PN +TY T+I+G CK  
Sbjct: 589 FVPVCLTYNSIMDGFIKEGSVSSALTAYREMC----ESGV--SPNVITYTTLINGFCKNN 642

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D A ++  +M+++ +  D+  Y ++I GFC   D   A  LF E++D G+ P+ V ++
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYN 702

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++        M+ A  L + M+  G++ +  TY TLIDG     ++  A  L+  M + 
Sbjct: 703 SLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAK 762

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D++ Y  LIN  C    +E A  + +EM    I P V  YN L  G F+   ++ A
Sbjct: 763 GIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEA 822

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
            +L +EM    +  +  TY+  I+G  K G
Sbjct: 823 FRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 165/367 (44%), Gaps = 42/367 (11%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           DI  ++ L+N + K  +++       R++ S   P       L+  L     I EA  ++
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            K  +             ++G C T H ++  NL                          
Sbjct: 233 EKMVLKG-----------VHGDCFTVHIMMRANL-------------------------- 255

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
               K+   ++AK+ FL+ K   +  D   Y+ VI+ FC   D   A  L  +M D+G  
Sbjct: 256 ----KDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWV 311

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P   TF+ ++    K G M +A RL + M+  GV  N     TL+ GYC  DK+  A + 
Sbjct: 312 PSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEF 371

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M  NG   + V+Y  LI W CKN ++ +A  LY++M +K I PTV   N+L  G  +
Sbjct: 372 FDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           +   E A KLFDE     + A+ +TYN+ +  LCK G + EA  L++ + D       VS
Sbjct: 432 VESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVS 490

Query: 501 YNCLIDG 507
           YN +I G
Sbjct: 491 YNSMILG 497



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 7/192 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  +L    SP  V  +N L        + +  L+L KR+   G+  D+ T++ LI
Sbjct: 682 ASWLFSELLDGGLSPNSVI-YNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +   K GR+     +   +      P+ + +T LI GLC + ++  A  +  +    +  
Sbjct: 741 DGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V  YN LI G  + G+   A  L  EM +          PN  TY+ +I+G  K G  
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKG------LTPNDTTYDILINGKIKGGNS 854

Query: 270 DKAKELFLKMKD 281
                L LK KD
Sbjct: 855 ALKSLLSLKFKD 866



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  L   L K       L L+  +++ G+ PDI  +++LIN  C  G++ +   +L 
Sbjct: 733 LQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILA 792

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R   TPN   + +LI G      + EA  L  +       P+  TY+ LING  + G
Sbjct: 793 EMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852

Query: 227 HTIVALNLFEEMANGNG 243
           ++ +   L  +  +G G
Sbjct: 853 NSALKSLLSLKFKDGKG 869


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 211/433 (48%), Gaps = 30/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+N +  CL +    D  L  F+ +    + P++ T++I+I+  CK G++    VV
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +   PN +T   ++  LC   R+ +A ++F       C PD  TY +LI GL R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 225 TGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTVT 255
            G    A  L+E+M + N     V                             C P+ + 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
            NT +D + K G ++K + LF ++K+    PD  +YT +I G   A   +EA  LF  M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           +QG   D   ++ ++D  CK+GK++KA +LLE M  +G  P   TY ++IDG    D++D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF   +S G   +VV Y++LI+ + K   ++EA  +  E++ KG+ P V T+N L 
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L +  ++  AL  F  M+      +  TY+  I GLCK     +A   ++ ++   ++
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 496 LNIVSYNCLIDGL 508
            N+ +Y  +I GL
Sbjct: 792 PNVFTYTTMISGL 804



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 43/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL  F+ M +   + P +S++NI+   L K    +T L +   +  AGLFP++ T +I
Sbjct: 392 DEALKKFEEMKK--DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNI 449

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           +++  CK  R+     +   +      P+AVT+ SLI+GL    R+ EA  L+ +     
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509

Query: 203 ------------------------HRVF------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                                   H+++       C PD+   NT ++ + + G      
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            LF+E+ N     G +  P+  +Y  +I GL K GF  +A ELF  MK++    D   Y 
Sbjct: 570 ALFQEIKN----LGFI--PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           +VI GFC +   N+A +L  EM  +G +P VVT+  ++D L K  ++D+A  L E    +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+  N   Y++LIDG+    +ID A  +   +   G   +V ++N L++   K +++ EA
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L  +  M      P  +TY+ L  GL +I +  +A   + EM++     + +TY   I G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+G ++EA  LF   ++     +   YN +I+GL
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 215/421 (51%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ +F++M   +   P   ++N +         ++   SL +R    G  P + +++ 
Sbjct: 322 NEAVELFEHM-DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNC 380

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++C  + G+V         + +    PN  T+  +I  LC   ++  A  +    +   
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAG 439

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +++ LC+      A ++FE + +        C+P+ VTY ++I+GL + G
Sbjct: 440 LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEGLGRHG 493

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A +L+ +M D N  P+ V YTS+IR F       +  +++ EM+  G  PD++  +
Sbjct: 494 RVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+++K   L + +   G  P+  +Y  LI G         A +LF +M+  
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YNT+I+ +CK+  V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E +   +  +   Y++ IDG  K G + EA  +   +       N+ ++NCL+D 
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733

Query: 508 L 508
           L
Sbjct: 734 L 734



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 201/415 (48%), Gaps = 29/415 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + NI+   L K +  D   S+F+ L+     PD  T+  LI    + GRV   + +
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +   PNAV +TSLI+      R  +   ++ +     C PD+   NT ++ + +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 225 TGHTIVALNLFEEMAN---------------GNGEFGVV--------------CKPNTVT 255
            G       LF+E+ N               G  + G                C  +T  
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+IDG CK G V+KA +L  +MK +   P VVTY SVI G    +  +EA  LF E  
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G++ +VV +S ++D   K G++D+A  ++E ++ +G+ PN YT+N L+D     ++I 
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A   F SM+   C  + ++Y+ LI+  CK +   +A   + EM  +G KP V TY T+ 
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            GL +   +  A  LF++ +     AD+  YN  I+GL  +    +A  LF   R
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 203/421 (48%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL + D M + +   P V  +N+   C  K    D     F  + + GL  D  T++ 
Sbjct: 252 DAALSLLDEM-KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   CK  R++    +   + ++   P A  + ++I G     +  +A +L  + R   
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V +YN +++ L R G    AL  FEEM            PN  TYN +ID LCK G
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-------AIPNLSTYNIMIDMLCKAG 423

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A  +   MKD  + P+V+T   ++   C A   ++A  +F  +  +  +PD VT+ 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ L ++G++D+A +L E M+     PN   Y +LI  +    + +   K++  M   
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D++  NT ++   K  ++E+  +L+ E+ + G  P   +Y  L  GL +      A
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LF  M+      DT  YN  IDG CKSG V +A +L   ++   +E  +V+Y  +IDG
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 508 L 508
           L
Sbjct: 664 L 664



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 203/432 (46%), Gaps = 30/432 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++  L G L+ ++  D +L+LF+++   G   +++  + LI  F + GRV     +
Sbjct: 198 PAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSL 257

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   P+ V +   I       ++  A   F + +      D  TY ++I  LC+
Sbjct: 258 LDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCK 317

Query: 225 TGHTIVALNLFEEMAN---------------GNGEFGVV--------------CKPNTVT 255
                 A+ LFE M                 G G  G                C P+ V+
Sbjct: 318 ADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVS 377

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN I+  L ++G VD+A + F +MK + I P++ TY  +I   C A     A  +   M 
Sbjct: 378 YNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMK 436

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D G+ P+V+T ++++D LCK  ++D A  + E +  +   P+  TY +LI+G     ++D
Sbjct: 437 DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVD 496

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL+  M     + + V Y +LI  + K    E+   +Y+EML  G  P ++  NT  
Sbjct: 497 EAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYM 556

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             +F+  ++E+   LF E++      D  +Y   I GL K+GF  EA ELF  +++    
Sbjct: 557 DCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616

Query: 496 LNIVSYNCLIDG 507
           L+  +YN +IDG
Sbjct: 617 LDTRAYNTVIDG 628



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 196/411 (47%), Gaps = 19/411 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNIL---FGCLAK---NKHYDTVLSLFKRLNSAGLFPD 141
           +EA  +++ ML  +  P  V   +++   F C  K   +K Y+ +L L       G  PD
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-------GCSPD 548

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   +  ++C  K G +  G  +   I    F P+A ++T LI GL       EA  LF 
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +   C  D   YNT+I+G C++G    A  L EEM     E      P  VTY ++ID
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVVTYGSVID 662

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GL K   +D+A  LF + K + I  +VV Y+S+I GF      +EA  +  E+M +G+ P
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +V T++ ++D L K  ++ +A    + M      PN  TY+ LI G C   K + A   +
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M+  G   +V +Y T+I+   K  ++ EA +L+ +   KG       YN +  GL   
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           ++   A +LF+E R    +  T T    +D L K+  + +A  +   +R++
Sbjct: 843 NRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRET 893



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 9/419 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F +  R+        ++N L   +A+ + ++ +  + + ++ AG  P   T   
Sbjct: 111 NNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIE 170

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  F K  ++   F  +  + +  F P    +T+LI  L           LF + +   
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +V  + TLI    R G    AL+L +EM + + E      P+ V YN  ID   K G
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLE------PDVVLYNVCIDCFGKAG 284

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ-PDVVTF 326
            VD A + F +MK   +  D VTYTS+I   C A+  NEA  LF E MDQ  Q P    +
Sbjct: 285 KVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF-EHMDQNKQVPCAYAY 343

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++      GK + A  LLE    +G  P+  +YN ++       ++D A K F  M+ 
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +  + ++ +YN +I+  CK   +E AL +   M   G+ P V+T N +   L +  +++ 
Sbjct: 404 DA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDD 462

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           A  +F+ +       D  TY + I+GL + G V EA +L+  + D+    N V Y  LI
Sbjct: 463 ACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P    Y  +I  L      D    LF +M++     +V  +T++IR F      + A  
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM    ++PDVV ++V +D   K GK+D A +    M   G+  +  TY ++I   C
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLC 316

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             D+++ A +LF  M+ N  +    +YNT+I  Y      E+A SL      KG  P+VV
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +YN +   L    QV+ ALK F+EM+++ +  +  TYN  ID LCK+G +  AL +  A+
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM 435

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +D+    N+++ N ++D L
Sbjct: 436 KDAGLFPNVITVNIMVDRL 454


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 211/433 (48%), Gaps = 30/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+N +  CL +    D  L  F+ +    + P++ T++I+I+  CK G++    VV
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +   PN +T   ++  LC   R+ +A ++F       C PD  TY +LI GL R
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 225 TGHTIVALNLFEEMANGNGEFGVV-----------------------------CKPNTVT 255
            G    A  L+E+M + N     V                             C P+ + 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
            NT +D + K G ++K + LF ++K+    PD  +YT +I G   A   +EA  LF  M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           +QG   D   ++ ++D  CK+GK++KA +LLE M  +G  P   TY ++IDG    D++D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  LF   +S G   +VV Y++LI+ + K   ++EA  +  E++ KG+ P V T+N L 
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L +  ++  AL  F  M+      +  TY+  I GLCK     +A   ++ ++   ++
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 496 LNIVSYNCLIDGL 508
            N+ +Y  +I GL
Sbjct: 792 PNVFTYTTMISGL 804



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 43/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL  F+ M +   + P +S++NI+   L K    +T L +   +  AGLFP++ T +I
Sbjct: 392 DEALKKFEEMKK--DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNI 449

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
           +++  CK  R+     +   +      P+AVT+ SLI+GL    R+ EA  L+ +     
Sbjct: 450 MVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN 509

Query: 203 ------------------------HRVF------ACEPDVFTYNTLINGLCRTGHTIVAL 232
                                   H+++       C PD+   NT ++ + + G      
Sbjct: 510 QIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGR 569

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            LF+E+ N     G +  P+  +Y  +I GL K GF  +A ELF  MK++    D   Y 
Sbjct: 570 ALFQEIKN----LGFI--PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           +VI GFC +   N+A +L  EM  +G +P VVT+  ++D L K  ++D+A  L E    +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+  N   Y++LIDG+    +ID A  +   +   G   +V ++N L++   K +++ EA
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L  +  M      P  +TY+ L  GL +I +  +A   + EM++     + +TY   I G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+G ++EA  LF   ++     +   YN +I+GL
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 215/421 (51%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ +F++M   +   P   ++N +         ++   SL +R    G  P + +++ 
Sbjct: 322 NEAVELFEHM-DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNC 380

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++C  + G+V         + +    PN  T+  +I  LC   ++  A  +    +   
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAG 439

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +++ LC+      A ++FE + +        C+P+ VTY ++I+GL + G
Sbjct: 440 LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEGLGRHG 493

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A +L+ +M D N  P+ V YTS+IR F       +  +++ EM+  G  PD++  +
Sbjct: 494 RVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+++K   L + +   G  P+  +Y  LI G         A +LF +M+  
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YNT+I+ +CK+  V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E +   +  +   Y++ IDG  K G + EA  +   +       N+ ++NCL+D 
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733

Query: 508 L 508
           L
Sbjct: 734 L 734



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 201/415 (48%), Gaps = 29/415 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + NI+   L K +  D   S+F+ L+     PD  T+  LI    + GRV   + +
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +   PNAV +TSLI+      R  +   ++ +     C PD+   NT ++ + +
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFK 561

Query: 225 TGHTIVALNLFEEMAN---------------GNGEFGVV--------------CKPNTVT 255
            G       LF+E+ N               G  + G                C  +T  
Sbjct: 562 AGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRA 621

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+IDG CK G V+KA +L  +MK +   P VVTY SVI G    +  +EA  LF E  
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 681

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G++ +VV +S ++D   K G++D+A  ++E ++ +G+ PN YT+N L+D     ++I 
Sbjct: 682 SKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIS 741

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A   F SM+   C  + ++Y+ LI+  CK +   +A   + EM  +G KP V TY T+ 
Sbjct: 742 EALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            GL +   +  A  LF++ +     AD+  YN  I+GL  +    +A  LF   R
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 203/421 (48%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL + D M + +   P V  +N+   C  K    D     F  + + GL  D  T++ 
Sbjct: 252 DAALSLLDEM-KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   CK  R++    +   + ++   P A  + ++I G     +  +A +L  + R   
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V +YN +++ L R G    AL  FEEM            PN  TYN +ID LCK G
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-------AIPNLSTYNIMIDMLCKAG 423

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A  +   MKD  + P+V+T   ++   C A   ++A  +F  +  +  +PD VT+ 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ L ++G++D+A +L E M+     PN   Y +LI  +    + +   K++  M   
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D++  NT ++   K  ++E+  +L+ E+ + G  P   +Y  L  GL +      A
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +LF  M+      DT  YN  IDG CKSG V +A +L   ++   +E  +V+Y  +IDG
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 508 L 508
           L
Sbjct: 664 L 664



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 203/432 (46%), Gaps = 30/432 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++  L G L+ ++  D +L+LF+++   G   +++  + LI  F + GRV     +
Sbjct: 198 PAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSL 257

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   P+ V +   I       ++  A   F + +      D  TY ++I  LC+
Sbjct: 258 LDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCK 317

Query: 225 TGHTIVALNLFEEMAN---------------GNGEFGVV--------------CKPNTVT 255
                 A+ LFE M                 G G  G                C P+ V+
Sbjct: 318 ADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVS 377

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN I+  L ++G VD+A + F +MK + I P++ TY  +I   C A     A  +   M 
Sbjct: 378 YNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMK 436

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D G+ P+V+T ++++D LCK  ++D A  + E +  +   P+  TY +LI+G     ++D
Sbjct: 437 DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVD 496

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL+  M     + + V Y +LI  + K    E+   +Y+EML  G  P ++  NT  
Sbjct: 497 EAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYM 556

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             +F+  ++E+   LF E++      D  +Y   I GL K+GF  EA ELF  +++    
Sbjct: 557 DCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCV 616

Query: 496 LNIVSYNCLIDG 507
           L+  +YN +IDG
Sbjct: 617 LDTRAYNTVIDG 628



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 196/411 (47%), Gaps = 19/411 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNIL---FGCLAK---NKHYDTVLSLFKRLNSAGLFPD 141
           +EA  +++ ML  +  P  V   +++   F C  K   +K Y+ +L L       G  PD
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-------GCSPD 548

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   +  ++C  K G +  G  +   I    F P+A ++T LI GL       EA  LF 
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +   C  D   YNT+I+G C++G    A  L EEM     E      P  VTY ++ID
Sbjct: 609 TMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVVTYGSVID 662

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GL K   +D+A  LF + K + I  +VV Y+S+I GF      +EA  +  E+M +G+ P
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +V T++ ++D L K  ++ +A    + M      PN  TY+ LI G C   K + A   +
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M+  G   +V +Y T+I+   K  ++ EA +L+ +   KG       YN +  GL   
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           ++   A +LF+E R    +  T T    +D L K+  + +A  +   +R++
Sbjct: 843 NRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRET 893



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 9/419 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F +  R+        ++N L   +A+ + ++ +  + + ++ AG  P   T   
Sbjct: 111 NNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIE 170

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  F K  ++   F  +  + +  F P    +T+LI  L           LF + +   
Sbjct: 171 IVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELG 230

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              +V  + TLI    R G    AL+L +EM + + E      P+ V YN  ID   K G
Sbjct: 231 YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLE------PDVVLYNVCIDCFGKAG 284

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ-PDVVTF 326
            VD A + F +MK   +  D VTYTS+I   C A+  NEA  LF E MDQ  Q P    +
Sbjct: 285 KVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF-EHMDQNKQVPCAYAY 343

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++      GK + A  LLE    +G  P+  +YN ++       ++D A K F  M+ 
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +  + ++ +YN +I+  CK   +E AL +   M   G+ P V+T N +   L +  +++ 
Sbjct: 404 DA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDD 462

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           A  +F+ +       D  TY + I+GL + G V EA +L+  + D+    N V Y  LI
Sbjct: 463 ACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P    Y  +I  L      D    LF +M++     +V  +T++IR F      + A  
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM    ++PDVV ++V +D   K GK+D A +    M   G+  +  TY ++I   C
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLC 316

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             D+++ A +LF  M+ N  +    +YNT+I  Y      E+A SL      KG  P+VV
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +YN +   L    QV+ ALK F+EM+++ +  +  TYN  ID LCK+G +  AL +  A+
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM 435

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +D+    N+++ N ++D L
Sbjct: 436 KDAGLFPNVITVNIMVDRL 454


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 199/395 (50%), Gaps = 6/395 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +F+ M +     P   +++IL   L +    +    L + +   G  P   T+++
Sbjct: 180 GEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 239

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C +G       +L  +      PN  T+T LI  LC E +I EA  +F K     
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + T+N LING C+ G  + A  L   M  GN      CKPN  TYN +++GLC+  
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVS 353

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              KA  L  ++ D  + PD VTY  ++ GFC     N A  +F  M   G++PD  TF+
Sbjct: 354 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 413

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LCK G++++A+ +L  M+ +G++ +  T+  LIDG+C   K      LF +M  N
Sbjct: 414 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 473

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C+    ++N  ++   K+  + EA ++  +M+  G+ P+VVT+  L  G     +   +
Sbjct: 474 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 533

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           LK+ + M++   + + YTY   I+GLC +G V EA
Sbjct: 534 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 568



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 211/441 (47%), Gaps = 14/441 (3%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            L + C+ S  G + L+   + +    + L    S P    ++ L  CLAK         
Sbjct: 62  LLIQECEDSENGVVKLMGALDGMTELGFRL----SYP---CYSTLLMCLAKLNMGFVAFL 114

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           +++R+ + G       +  ++N  CK G V    +   ++LR  F  +    TSL+   C
Sbjct: 115 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 174

Query: 189 AESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
               + EA  +F K  +  +C P+  TY+ LI+GLC  G    A  L +EM         
Sbjct: 175 RRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG----- 229

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C+P+T TY  +I   C  G  DKA ++  +M  +   P+V TYT +I   C      EA
Sbjct: 230 -CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +F +M+  G+ P ++TF+ +++  CK G +  A +LL +M      PN  TYN L++G
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   K   A  L   +  NG + D V+YN L++ +CK   +  A ++++ M S G++P 
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             T+  L  GL ++ ++E+A  +   M +  ++ D  T+   IDG CK G   +   LF 
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 468

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +++      ++NC +D L
Sbjct: 469 NMVENRCLTTAHTFNCFLDAL 489



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 218/452 (48%), Gaps = 20/452 (4%)

Query: 36  SSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKER-CKSSGQGDINLITPNEALCIF 94
            S   N  +Y      L E+ RL  ++   LK+ + E+ C+ S +    LI     + + 
Sbjct: 193 ESCRPNSVTYSILIHGLCEAGRL--EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250

Query: 95  DYMLRM------HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           D  ++M          P V ++ IL   L +    +    +F+++   GL P I T + L
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 310

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN +CK G V   F +L  + +    PN  T+  L++GLC  S+  +A  L  +      
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  TYN L++G C+ G   +A N+F  M +   E      P+  T+  +IDGLCK G 
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGR 424

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A  +   M  + I+ D VT+T++I G C      +   LF  M++        TF+ 
Sbjct: 425 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 484

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L K+ K+++A+ +L  M+  G+ P+  T+  LI+G+C   +   + K+   M+  G
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  +V +Y  +IN  C N  VEEA ++   M S G+ P   TY  L     +  +++RA 
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 604

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           ++   M +N    +++ Y+  +     SGFVL
Sbjct: 605 QIVSTMVKNGCQPNSHIYSALL-----SGFVL 631



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+  T+SILI+  C+ GR+   F +   ++     P+  T+T LIK  C      +A  +
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +    AC P+V TY  LI+ LCR G    A  +F +M         +C P  +T+N +
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNAL 310

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+G CKEG+V  A +L   M+  N  P++ TY  ++ G C  +   +A  L   ++D G+
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD VT+++++D  CK G+++ A  +   M   G+ P+ +T+  LIDG C   +++ A  
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +  SM   G   D V++  LI+ +CK    ++   L+  M+      T  T+N     L 
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 490

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           + +++  A  +  +M +  +     T+   I+G C++G    +L++   ++ +    N+ 
Sbjct: 491 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 550

Query: 500 SYNCLIDGL 508
           +Y  +I+GL
Sbjct: 551 TYTIIINGL 559



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 11/384 (2%)

Query: 105 PPVSSFNILFGCLAK-NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P + ++N L   L + +K Y   L L +R+   GL PD  T++IL++ FCK G+++  F 
Sbjct: 337 PNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 395

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +  +   P+  TFT+LI GLC   R+ +A  +           D  T+  LI+G C
Sbjct: 396 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 455

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G       LFE M          C     T+N  +D L K+  +++A  +  KM    
Sbjct: 456 KIGKAKDVCFLFENMVENR------CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 509

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P VVT+T +I G C A +   + ++   M   G  P+V T+++I++ LC NG++++A 
Sbjct: 510 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M   GV+PN +TY  L+  +    ++D A ++  +M  NGC  +   Y+ L++ +
Sbjct: 570 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 629

Query: 404 CKNKDV--EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             +       ALS   ++ ++ +       N L   +F +  V+ ALK+ DE+++  V  
Sbjct: 630 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPT 689

Query: 462 DTYTYNNFIDGLCKSGFVLEALEL 485
           +   YN  + GLCK G ++EA +L
Sbjct: 690 EDL-YNFLVVGLCKEGRIIEADQL 712



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 185/464 (39%), Gaps = 119/464 (25%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++NIL     K    +   ++F  +NSAGL PD +T + LI+  CK+GR+     +
Sbjct: 372 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 431

Query: 165 LGRILRSCFTPNAVTFTSLIKGLC---------------AESRIM--------------- 194
           LG +++   + + VTFT+LI G C                E+R +               
Sbjct: 432 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 491

Query: 195 -----EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                EA A+  K   +   P V T+  LI G CR G T ++L + E M          C
Sbjct: 492 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG------C 545

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN------------------------ 285
            PN  TY  II+GLC  G V++A+ +   M    ++                        
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 605

Query: 286 -----------PDVVTYTSVIRGFCYAN-------------------------------- 302
                      P+   Y++++ GF  +N                                
Sbjct: 606 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH 665

Query: 303 -----DWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                D + A ++  E+   GV   D+  F V+   LCK G++ +A +L + M+  G+ P
Sbjct: 666 VFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVV--GLCKEGRIIEADQLTQDMVKHGLFP 723

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +    +++I+ YC T K D+  +    +  N  +    SY  +I+       V+EA  L 
Sbjct: 724 DK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 782

Query: 417 SEMLSK-GIKPTV-VTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           S+++   GI+  V VT +  FL   E    ++ LKL   + + H
Sbjct: 783 SDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVH 826


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 13/381 (3%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKM 155
           +LR  P P  V+ +N +             L + + +    G+ P+ YT+  +I+ +CK+
Sbjct: 176 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 234

Query: 156 GRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDV 212
           GRV     V   +L +    P AV + +LI G C + ++    AL  + R+        V
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL--DTALLYRDRMVERGVAMTV 292

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN L++ L   G    A  L EEM    G  G+    +  TYN +I+G CKEG V KA
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEM----GGKGLAL--DVFTYNILINGHCKEGNVKKA 346

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+F  M    +   VVTYTS+I          E  +LF E + +G++PD+V ++ +++ 
Sbjct: 347 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 406

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              +G +D+A  ++  M  + + P+  TYNTL+ G CL  ++D ARKL   M   G   D
Sbjct: 407 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 466

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+YNTLI+ Y    DV++AL + +EM++KG  PT++TYN L  GL +  Q + A  +  
Sbjct: 467 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 526

Query: 453 EMRRNHVAADTYTYNNFIDGL 473
           EM  N +  D  TY + I+GL
Sbjct: 527 EMVENGITPDDSTYISLIEGL 547



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 200/440 (45%), Gaps = 41/440 (9%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA----------------------GL 138
           H    P S  N+L    A  + + T L L+ R+ S                        L
Sbjct: 82  HLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL 141

Query: 139 FPDIY---------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F D++         T +I++   C  G+ +        +LR    PNAVT+ ++I G C+
Sbjct: 142 FADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCS 197

Query: 190 ESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
             R+  A  +  + R      P+ +TY T+I+G C+ G    A+ +F+EM    GE    
Sbjct: 198 RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGE---- 252

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            KP  V YN +I G C +G +D A     +M +  +   V TY  ++          EA 
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 312

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM  +G+  DV T++++++  CK G + KA  + E M  RGV     TY +LI   
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 372

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
               ++    KLF      G   D+V YN LIN +  + +++ A  +  EM  K I P  
Sbjct: 373 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 432

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTYNTL  GL  + +V+ A KL DEM +  +  D  TYN  I G    G V +AL +   
Sbjct: 433 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 492

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           + +  +   +++YN LI GL
Sbjct: 493 MMNKGFNPTLLTYNALIQGL 512



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 203/424 (47%), Gaps = 19/424 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M R+   P   ++FNI+   L         L L +++      P+  T++ +I
Sbjct: 138 AFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 192

Query: 150 NCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALF----TKHR 204
             FC  GRV     ++  +  R    PN  T+ ++I G C   R+ EA  +F    TK  
Sbjct: 193 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 252

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           V   +P+   YN LI G C  G    AL   + M     E GV       TYN ++  L 
Sbjct: 253 V---KPEAVMYNALIGGYCDQGKLDTALLYRDRMV----ERGVAM--TVATYNLLVHALF 303

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G   +A EL  +M  + +  DV TY  +I G C   +  +A  +F  M  +GV+  VV
Sbjct: 304 MDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 363

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++  L K G++ +  +L +  + RG+ P+   YN LI+ +  +  ID A ++   M
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E      D V+YNTL+   C    V+EA  L  EM  +GI+P +VTYNTL  G      V
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL++ +EM          TYN  I GLCK+G   +A  + + + ++    +  +Y  L
Sbjct: 484 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543

Query: 505 IDGL 508
           I+GL
Sbjct: 544 IEGL 547



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 143/274 (52%), Gaps = 8/274 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+++N+L   L  +        L + +   GL  D++T++ILIN  CK G V     +  
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE 351

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R       VT+TSLI  L  + ++ E   LF +       PD+  YN LIN    +G
Sbjct: 352 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 411

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  +  EM            P+ VTYNT++ GLC  G VD+A++L  +M    I P
Sbjct: 412 NIDRAFEIMGEMEKKR------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 465

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY ++I G+    D  +A R+  EMM++G  P ++T++ ++  LCKNG+ D A  ++
Sbjct: 466 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 525

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDK--IDHAR 378
           + M+  G+ P+  TY +LI+G    D+  ID  R
Sbjct: 526 KEMVENGITPDDSTYISLIEGLTTEDERAIDDER 559


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 212/453 (46%), Gaps = 47/453 (10%)

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           L  F  ML+   +PP   ++N L     K        +   R+  AGL PD +T++ L+ 
Sbjct: 75  LASFGAMLK-SGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLML 133

Query: 151 CFCKMGRVSHG---FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
             C+ G ++     FV + R   +C+  +  ++T LIKGLCA  RI +A  +F K     
Sbjct: 134 GLCRAGLLAAACGLFVQMPRRWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGW 191

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TY  L++GLC+      A  L  EM N     GVV  PN VTYN +I GLC+EG
Sbjct: 192 CRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK----GVV--PNVVTYNALIGGLCQEG 245

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D   +L  KM+ +  +PD  TYT V+ G C         ++  E + +GV  +V+T++
Sbjct: 246 RFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYN 305

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  CK G M  A  +L+LM    VNP   T+N +I G+C   K+  A      M   
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365

Query: 388 GCMHDVVSYNTL-----------------------------------INWYCKNKDVEEA 412
           G   + V++N+L                                   I+  C    +EEA
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            SL+S +  KGIK   V Y +L  G  ++  ++ A  L ++M   +   D +TYN  IDG
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDG 485

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           LCK   +  A++L   ++    E    ++N LI
Sbjct: 486 LCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 195/384 (50%), Gaps = 9/384 (2%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           +L+ F  +  +G  P+  T++ LIN  CK+  ++     L R+  +   P+  T+  L+ 
Sbjct: 74  LLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLML 133

Query: 186 GLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           GLC    +  A  LF +   R  AC  D ++Y  LI GLC  G    A  +F +M+ G  
Sbjct: 134 GLCRAGLLAAACGLFVQMPRRWGACY-DRYSYTILIKGLCAAGRIDDACRVFAKMSRG-- 190

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                C+P   TY  ++DGLCK   V +A+ L  +M ++ + P+VVTY ++I G C    
Sbjct: 191 ----WCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           +++  +L  +M  Q   PD  T++ ++  LCK+GK+   +++L   I +GV     TYN 
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI+GYC    +  A  +   M+ N     V ++N +I+ +C    V +A++  ++M   G
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           + P  VT+N+L  G   + + + AL+L D M    V  D  TY  FID LC  G + EA 
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426

Query: 484 ELFRAIRDSKYELNIVSYNCLIDG 507
            LF  +     + + V Y  L+ G
Sbjct: 427 SLFSCLPMKGIKAHNVIYTSLVHG 450



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 198/455 (43%), Gaps = 57/455 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L G L +   +D V  L +++      PD +T++ +++  CK G+V HG  V
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288

Query: 165 LGRIL-----------------------------------RSCFTPNAVTFTSLIKGLCA 189
           L   +                                   R+   P   TF  +I G C 
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ +A A  T+       P+  T+N+LI+G C  G   +AL L + M     E+GV+ 
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME----EYGVL- 403

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+  TY   ID LC EG +++A  LF  +  + I    V YTS++ G+C   D + A  
Sbjct: 404 -PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  +M  +   PDV T++ ++D LCK  ++D+A  LL+ M  +G+ P T T+N LI    
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLI--NWYCKNKDVEEALSLYSEMLSKGIKPT 427
              K   A K++  M S+GC  D  +Y   I  +W+      E       EM   G+ P 
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPD 582

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC------------- 474
           V TYN +     +    E+A     +M    +  D  TY+  ++ +C             
Sbjct: 583 VETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKI 642

Query: 475 -KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            K   V    ELF  + +S     I +Y  L+ GL
Sbjct: 643 WKMVDVRNLQELFEQMCESDAAPGISTYKALLRGL 677



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 170/420 (40%), Gaps = 28/420 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ I    L      +   SLF  L   G+      ++ L++ +C++G +   F +
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + ++      P+  T+ +LI GLC   R+  A  L  K +    EP   T+N LI  +  
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII-----DGLCKEGFVDKAKELFLKM 279
                 A  ++E+M +        CKP+  TY   I     +G  KE  +D A    ++M
Sbjct: 524 DKKHADAAKMYEQMISSG------CKPDKQTYTLKISTDWFEGATKEENIDMA---VVEM 574

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            +  + PDV TY ++I+ +  A    +A    ++M+   + PD  T+S++++ +C     
Sbjct: 575 HEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDS 634

Query: 340 DK--------------ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           D                  L E M      P   TY  L+ G C   +++    L + M+
Sbjct: 635 DAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQ 694

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            N  + D    + L+  YC  +   EA   +  M  +  +P + +   L  GL +     
Sbjct: 695 GNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHG 754

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ +F +M       D   +   ID L + G     LE+   +   K   +  +Y  L+
Sbjct: 755 MAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 141/374 (37%), Gaps = 63/374 (16%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D+   L +++ S    PD++T++ LI+  CK+ R+     +L ++ +    P   TF  L
Sbjct: 458 DSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI---VALNLFEEMAN 240
           IK +  + +  +AA ++ +     C+PD  TY   I+     G T    + + + E    
Sbjct: 518 IKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMH-- 575

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA---------------------------- 272
              E GV   P+  TYN II      G  +KA                            
Sbjct: 576 ---EAGVF--PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCN 630

Query: 273 ---------------------KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
                                +ELF +M + +  P + TY +++RG C      E + L 
Sbjct: 631 KDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLL 690

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
           ++M    +  D      ++   C      +A      M  +   P   +   L+ G C  
Sbjct: 691 LKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLC-- 748

Query: 372 DKIDH--ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           D  DH  A  +F  M   G  +D V +  LI+   +       L + S M +K    +  
Sbjct: 749 DSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTR 808

Query: 430 TYNTLFLGLFEIHQ 443
           TY +L   + E+++
Sbjct: 809 TYASLVRLVAELNE 822


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 216/421 (51%), Gaps = 16/421 (3%)

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKN---KHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           L +F +M R  P  P  +++N L   L +    +H    LSL  R   +G  PD +T + 
Sbjct: 113 LRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVR---SGWRPDAFTFNS 169

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +C+  ++     +  ++    F+ +AV++ +LI+G C   RI EA  LF +     
Sbjct: 170 LILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFRE----M 225

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD++T+  L+ GLC  G     L + ++M     E G   +P T  Y  ++D  C+E 
Sbjct: 226 TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMK----ELG--WRPTTRAYAALVDLWCREQ 279

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A+++  +M D  + P VVT T V+  +C     + A R+F  M  +G +P+V T++
Sbjct: 280 KAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYN 339

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+   C  GK+ KA  LL+ M   GV P+  TYN LI G C+   I  A +L   ME N
Sbjct: 340 AIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGN 399

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D  +YN LI+  CK   V+EA SL+  +  +GI+P  VT+NT+  GL +  + + A
Sbjct: 400 GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVA 459

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               + M     A DTYTY+ FI+ LCK+    E L     +     + + V+Y  +I+ 
Sbjct: 460 CTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINR 519

Query: 508 L 508
           L
Sbjct: 520 L 520



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 190/399 (47%), Gaps = 10/399 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L     +    D  L LF+ +      PD+YTH+ L+   C  GR   G  +L ++
Sbjct: 201 SYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKM 256

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
               + P    + +L+   C E +  EA  +  +       P V T   ++N  CR G  
Sbjct: 257 KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRM 316

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ +FE M          C+PN  TYN I+ G C  G V KA  L  +M++  + PDV
Sbjct: 317 SGAVRVFESMRFKG------CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY  +IRG C       A RL   M   G+  D  T++V++D LCK GK+D+A  L + 
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           + +RG+ PN+ T+NT+I+G C   K D A     +M S G   D  +Y+  I   CK K 
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            +E L    EML K +KP+ V Y  +   LF       A +++ +M     + D  TY  
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTT 550

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   C  G + EA  +   ++  +  ++ ++YN LIDG
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 221/531 (41%), Gaps = 66/531 (12%)

Query: 32  RKPTSSISENEPSYPT------TTSKLKESLRL----TVKDRASLKKFLKERCKSSGQGD 81
           + P    S++  SY           ++ E+L L    T  D  +    +K  C  +G+G+
Sbjct: 189 KMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLC-DAGRGE 247

Query: 82  INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
                  E LC+   M  +   P    ++  L     + +  +    +   +  +GL P 
Sbjct: 248 -------EGLCMLQKMKELGWRPT-TRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPC 299

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + T +I++N +C+ GR+S    V   +      PN  T+ ++++G C   ++ +A AL  
Sbjct: 300 VVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLD 359

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE----------FGVVCK- 250
           + R    EPDV TYN LI G C  GH   A  L   M  GNG              +CK 
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM-EGNGLAADQYTYNVLIDALCKT 418

Query: 251 -------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
                              PN+VT+NT+I+GLCK G  D A      M      PD  TY
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTY 478

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           +  I   C      E      EM+ + V+P  V ++++++ L        A+R+   M+ 
Sbjct: 479 SPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVS 538

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +G +P+  TY T +  YC   ++D A  +   M+    + D ++YNTLI+ +      + 
Sbjct: 539 QGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDR 598

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFL----------------GLFEIHQVERALKLFDEMR 455
           A+++   M      P   T+  L                   +++  ++    +LF+ M+
Sbjct: 599 AVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMK 658

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           +N V +   TY + ++G  +   + E   L   +++    LN   YN L++
Sbjct: 659 KNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVN 709



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 189/451 (41%), Gaps = 60/451 (13%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  N     +A+ + D M R     P V ++N+L      + H  +   L + +   GL
Sbjct: 343 QGFCNAGKVYKAMALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGL 401

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             D YT+++LI+  CK G+V     +   +      PN+VTF ++I GLC   +  + A 
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF-DVAC 460

Query: 199 LFTKHRVFAC-EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            F ++ + A   PD +TY+  I  LC+T  +   L   +EM   +       KP+TV Y 
Sbjct: 461 TFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKD------VKPSTVNYT 514

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I+ L  E     A  ++ +M  +  +PDVVTYT+ +R +C     +EA+ +  EM   
Sbjct: 515 IVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELM---------------------------- 349
               D + ++ ++D     G+ D+A  +L+ M                            
Sbjct: 575 RTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHV 634

Query: 350 ------IWR-----------------GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
                 +W+                  V  +  TY ++++G+    ++D    L   M+ 
Sbjct: 635 PLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKE 694

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                +   YN L+N +CK +   +A +L   M+  G  P ++ Y  L  GL    Q +R
Sbjct: 695 ENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADR 754

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           A ++F   R      D   +   IDG  + G
Sbjct: 755 AKEIFRSSRWKEYNTDEIVWKVIIDGFIRKG 785



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 145/392 (36%), Gaps = 81/392 (20%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +FD +      P  V+ FN +   L K   +D   +  + + SAG  PD YT+S 
Sbjct: 422 DEACSLFDGLEYRGIRPNSVT-FNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP 480

Query: 148 LINCFCKMGRVSHGFV-----------------------------------VLGRILRSC 172
            I   CK      G                                     + G+++   
Sbjct: 481 FIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG 540

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +P+ VT+T+ ++  C E R+ EA  + T+ +      D   YNTLI+G    G T  A+
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAV 600

Query: 233 NLFEEMANGNG----------------------------------------EFGVVCKPN 252
            + + M                                             E   + K N
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKN 660

Query: 253 TV-----TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +V     TY +I++G  +E  +D+   L   MK+EN+  +   Y +++  FC    +++A
Sbjct: 661 SVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDA 720

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L   M+  G  P+++ +  ++  L   G+ D+A  +     W+  N +   +  +IDG
Sbjct: 721 WALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDG 780

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           +      D    +   +E   C     +Y  L
Sbjct: 781 FIRKGHADMCHDMISMLEQMKCKPSDETYAML 812


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 232/484 (47%), Gaps = 66/484 (13%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M +     P + S N L   L KN    T   +++++   G+ PD++  SI++
Sbjct: 141 ALYVFDNMGKCG-RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 199

Query: 150 NCFCKMGRVS-------------------------HGFVVLGRILRS----------CFT 174
           N FCK G+V                          +G+V LG +  +            +
Sbjct: 200 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 259

Query: 175 PNAVTFTSLIKGLCAESRIMEA-AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            N VT+T LIKG C + ++ EA   L       A  PD   Y  LI+G CRTG    A+ 
Sbjct: 260 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 319

Query: 234 LFEEM---------------ANG---NGEF----GVVC-------KPNTVTYNTIIDGLC 264
           L +EM                NG    GE     GV+        KP++ +YNT++DG C
Sbjct: 320 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 379

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +EG   +A  L  KM  E I P V+TY ++++G C    +++A +++  MM +GV PD V
Sbjct: 380 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 439

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            +S ++D L K    + AS L + ++ RG   +  T+NT+I G C   K+  A ++F  M
Sbjct: 440 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 499

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  GC  D ++Y TLI+ YCK  +V +A  +   M  + I P++  YN+L  GLF+  ++
Sbjct: 500 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 559

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
                L  EM    +  +  TY   IDG CK G + +A   +  + ++    NI+  + +
Sbjct: 560 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 619

Query: 505 IDGL 508
           + GL
Sbjct: 620 VSGL 623



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 206/430 (47%), Gaps = 39/430 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D ML+     P V ++N L   L +   +D  L ++  +   G+ PD   +S 
Sbjct: 385 SEAFNLCDKMLQ-EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   KM        +   IL   FT + +TF ++I GLC   +++EA  +F K +   
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD  TY TLI+G C+  +   A  +   M            P+   YN++I GL K  
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP------ISPSIEMYNSLISGLFKSR 557

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +  +L  +M    + P++VTY ++I G+C     ++A   + EM + G+  +++  S
Sbjct: 558 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 617

Query: 328 VIMDELCKNGKMDKASRLLELMIWRG--------------------------------VN 355
            ++  L + G++D+A+ L++ M+  G                                + 
Sbjct: 618 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 677

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN   YN  I G C T K+D AR+ F  +   G + D  +Y TLI+ Y    +V+EA  L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EML +G+ P +VTYN L  GL +   V+RA +LF ++ +  +  +  TYN  IDG CK
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797

Query: 476 SGFVLEALEL 485
            G +  A +L
Sbjct: 798 IGNMDAAFKL 807



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 186/359 (51%), Gaps = 6/359 (1%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           A L PD   + +LI+ +C+ G++     +L  +LR     N     SLI G C    I E
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  + T+   +  +PD ++YNTL++G CR GHT  A NL ++M     E      P  +T
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVLT 405

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT++ GLC+ G  D A +++  M    + PD V Y++++ G     ++  A  L+ +++
Sbjct: 406 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 465

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G     +TF+ ++  LCK GKM +A  + + M   G +P+  TY TLIDGYC    + 
Sbjct: 466 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 525

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A K+  +ME       +  YN+LI+   K++ + E   L +EM  +G+ P +VTY  L 
Sbjct: 526 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            G  +   +++A   + EM  N ++A+    +  + GL + G + EA  L + + D  +
Sbjct: 586 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 61/478 (12%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD--- 141
           + P  +L  F ++ +     P V S+  L   L++ + YD   +   +L     F D   
Sbjct: 46  LNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGN 105

Query: 142 --------IYTH--------SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
                   +Y           +++  + + G   +   V   + +    P+  +  SL+ 
Sbjct: 106 VIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 165

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
            L        A  ++ +       PDVF  + ++N  C+ G    A    ++M N     
Sbjct: 166 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----L 221

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           GV  +PN VTY+++I+G    G V+ AK +   M ++ ++ +VVTYT +I+G+C     +
Sbjct: 222 GV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 279

Query: 306 EAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           EA+++   M ++  + PD   + V++D  C+ GK+D A RLL+ M+  G+  N +  N+L
Sbjct: 280 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 339

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+GYC   +I  A  +   M       D  SYNTL++ YC+     EA +L  +ML +GI
Sbjct: 340 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 399

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY-------------------- 464
           +PTV+TYNTL  GL  +   + AL+++  M +  VA D                      
Sbjct: 400 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAST 459

Query: 465 ---------------TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                          T+N  I GLCK G ++EA E+F  ++D     + ++Y  LIDG
Sbjct: 460 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 517



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 193/435 (44%), Gaps = 38/435 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N L     +  H     +L  ++   G+ P + T++ L+   C++G       +
Sbjct: 366 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+ V +++L+ GL        A+ L+             T+NT+I+GLC+
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  +F++M +      + C P+ +TY T+IDG CK   V +A ++   M+ E I
Sbjct: 486 MGKMVEAEEIFDKMKD------LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 539

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P +  Y S+I G   +    E   L  EM  +G+ P++VT+  ++D  CK G +DKA  
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 599

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV----------- 393
               M   G++ N    +T++ G     +ID A  L   M  +G   D            
Sbjct: 600 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 659

Query: 394 ---------------------VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
                                + YN  I   CK   V++A   +S +  KG  P   TY 
Sbjct: 660 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 719

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G      V+ A +L DEM R  +  +  TYN  I+GLCKS  V  A  LF  +   
Sbjct: 720 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 779

Query: 493 KYELNIVSYNCLIDG 507
               N+V+YN LIDG
Sbjct: 780 GLFPNVVTYNTLIDG 794



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 207/465 (44%), Gaps = 61/465 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ +L     +    D  + L   +   GL  +++  + LIN +CK G +     V
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + R++     P++ ++ +L+ G C E    EA  L  K      EP V TYNTL+ GLCR
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 225 TGHTIVALNLFEEMAN---GNGEFG-----------------------VVCKPNT---VT 255
            G    AL ++  M        E G                       ++ +  T   +T
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 475

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +NT+I GLCK G + +A+E+F KMKD   +PD +TY ++I G+C A++  +A ++   M 
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P +  ++ ++  L K+ ++ + + LL  M  RG+ PN  TY  LIDG+C    +D
Sbjct: 536 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG------------ 423
            A   +  M  NG   +++  +T+++   +   ++EA  L  +M+  G            
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 424 --------------------IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
                               + P  + YN    GL +  +V+ A + F  +       D 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +TY   I G   +G V EA  L   +       NIV+YN LI+GL
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 152/341 (44%), Gaps = 61/341 (17%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN +   L K         +F ++   G  PD  T+  LI+ +CK   V   F V G +
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY------------- 215
            R   +P+   + SLI GL    R++E   L T+  +    P++ TY             
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594

Query: 216 ----------------------NTLINGLCRTGHTIVALNLFEEMAN------------G 241
                                 +T+++GL R G    A  L ++M +             
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 654

Query: 242 NGEFGVV----------CK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           +  +  +          CK    PN + YN  I GLCK G VD A+  F  +  +   PD
Sbjct: 655 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             TY ++I G+  A + +EA RL  EM+ +G+ P++VT++ +++ LCK+  +D+A RL  
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +  +G+ PN  TYNTLIDGYC    +D A KL   M   G
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 815



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D MLR     P + ++N L   L K+++ D    LF +L+  GLFP++ T++ 
Sbjct: 732 DEAFRLRDEMLR-RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 790

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           LI+ +CK+G +   F +  +++    +P+
Sbjct: 791 LIDGYCKIGNMDAAFKLKDKMIEEGISPS 819


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 215/423 (50%), Gaps = 42/423 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  + FN L   +  +  ++   S F   N + +  D+Y+  ILI   C+ G +   F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKHRVFACE------------ 209
           L  +    F+PN V +T+LI G C +  I +A  LF    K  + A E            
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 210 --------------------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                               P+++TYN ++N LC+ G T  A  +F+EM     E GV C
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR----ERGVSC 301

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             N VTYNT+I GLC+E  +++A ++  +MK + INP+++TY ++I GFC      +A  
Sbjct: 302 --NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  ++  +G+ P +VT+++++   C+ G    A+++++ M  RG+ P+  TY  LID + 
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            +D ++ A +L +SME  G + DV +Y+ LI+ +C    + EA  L+  M+ K  +P  V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            YNT+ LG  +     RALKL  EM    +A +  +Y   I+ LCK     EA  L   +
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539

Query: 490 RDS 492
            DS
Sbjct: 540 IDS 542



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 181/329 (55%), Gaps = 6/329 (1%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           +F  LIKG C    I ++  L  +   F   P+V  Y TLI+G C+ G    A +LF EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
               G+ G+V   N  TY  +I+GL K G   +  E++ KM+++ + P++ TY  V+   
Sbjct: 225 ----GKLGLV--ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      +A ++F EM ++GV  ++VT++ ++  LC+  K+++A+++++ M   G+NPN 
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTLIDG+C   K+  A  L   ++S G    +V+YN L++ +C+  D   A  +  E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M  +GIKP+ VTY  L         +E+A++L   M    +  D +TY+  I G C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + EA  LF+++ +   E N V YN +I G
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILG 487



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 170/319 (53%), Gaps = 6/319 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ +L   L KN        +++++   G+FP++YT++ ++N  CK GR    F V   +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                + N VT+ +LI GLC E ++ EA  +  + +     P++ TYNTLI+G C  G  
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL+L  ++ +          P+ VTYN ++ G C++G    A ++  +M++  I P  
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT +I  F  +++  +A +L + M + G+ PDV T+SV++   C  G+M++ASRL + 
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +   PN   YNT+I GYC       A KL   ME      +V SY  +I   CK + 
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528

Query: 409 VEEALSLYSEMLSKGIKPT 427
            +EA  L  +M+  GI P+
Sbjct: 529 SKEAERLVEKMIDSGIDPS 547



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 137/270 (50%), Gaps = 7/270 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD M R       + ++N L G L +    +    +  ++ S G+ P++ T++ L
Sbjct: 286 DAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FC +G++     +   +     +P+ VT+  L+ G C +     AA +  +      
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P   TY  LI+   R+ +   A+ L   M     E G+V  P+  TY+ +I G C +G 
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSME----ELGLV--PDVHTYSVLIHGFCIKGQ 458

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A  LF  M ++N  P+ V Y ++I G+C       A +L  EM ++ + P+V ++  
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           +++ LCK  K  +A RL+E MI  G++P+T
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  + D M +     P + ++N L             LSL + L S GL P + T++I
Sbjct: 320 NEANKVVDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FC+ G  S    ++  +      P+ VT+T LI        + +A  L        
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV TY+ LI+G C  G    A  LF+ M   N      C+PN V YNT+I G CKEG
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN------CEPNEVIYNTMILGYCKEG 492

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A +L  +M+++ + P+V +Y  +I   C      EA+RL  +M+D G+ P     S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552

Query: 328 VI 329
           +I
Sbjct: 553 LI 554



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 34/284 (11%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G     F   +  L    + E        Y  +I  +  +   N +   F EM+D G
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124

Query: 319 VQP----------------------------------DVVTFSVIMDELCKNGKMDKASR 344
             P                                  DV +F +++   C+ G+++K+  
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +   G +PN   Y TLIDG C   +I+ A+ LF  M   G + +  +Y  LIN   
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN   ++   +Y +M   G+ P + TYN +   L +  + + A ++FDEMR   V+ +  
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I GLC+   + EA ++   ++      N+++YN LIDG 
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 6/200 (3%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+     P + ++NIL     +         + K +   G+ P   T++ILI+ F +   
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +   +      P+  T++ LI G C + ++ EA+ LF       CEP+   YNT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           +I G C+ G +  AL L +EM            PN  +Y  +I+ LCKE    +A+ L  
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKE------LAPNVASYRYMIEVLCKERKSKEAERLVE 537

Query: 278 KMKDENINPDVVTYTSVIRG 297
           KM D  I+P     + + R 
Sbjct: 538 KMIDSGIDPSTSILSLISRA 557


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 207/418 (49%), Gaps = 6/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +F+ M +     P   +++IL   L +    +    L + +   G  P   T+++
Sbjct: 246 GEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 305

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C +G       +L  +      PN  T+T LI  LC E +I EA  +F K     
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + T+N LING C+ G  + A  L   M  GN      CKPN  TYN +++GLC+  
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVS 419

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              KA  L  ++ D  + PD VTY  ++ GFC     N A  +F  M   G++PD  TF+
Sbjct: 420 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 479

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LCK G++++A+ +L  M+ +G++ +  T+  LIDG+C   K      LF +M  N
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C+    ++N  ++   K+  + EA ++  +M+  G+ P+VVT+  L  G     +   +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 599

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           LK+ + M++   + + YTY   I+GLC +G V EA  +  ++       N  +Y  L+
Sbjct: 600 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 657



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 14/441 (3%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            L + C+ S  G + L+   + +    + L    S P    ++ L  CLAK         
Sbjct: 128 LLIQECEDSENGVVKLMGALDGMTELGFRL----SYP---CYSTLLMCLAKLNMGFVAFL 180

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           +++R+ + G       +  ++N  CK G V    +   ++LR  F  +    TSL+   C
Sbjct: 181 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 240

Query: 189 AESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
               + EA  +F K  +   C P+  TY+ LI+GLC  G    A  L +EM         
Sbjct: 241 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG----- 295

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C+P+T TY  +I   C  G  DKA ++  +M  +   P+V TYT +I   C      EA
Sbjct: 296 -CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +F +M+  G+ P ++TF+ +++  CK G +  A +LL +M      PN  TYN L++G
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   K   A  L   +  NG + D V+YN L++ +CK   +  A ++++ M S G++P 
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             T+  L  GL ++ ++E+A  +   M +  ++ D  T+   IDG CK G   +   LF 
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +++      ++NC +D L
Sbjct: 535 NMVENRCLTTAHTFNCFLDAL 555



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 46/411 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ +L          D  + +   + +    P+++T++ILI+  C+ G++     V
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L+    P  +TF +LI G C E  ++ A  L +      C+P++ TYN L+ GLCR
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +  A  L   + + NG       P+ VTYN ++DG CKEG ++ A  +F  M    +
Sbjct: 418 VSKSYKAFLLLRRVVD-NGLL-----PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG------- 337
            PD  T+T++I G C      +A  +   M+ +G+  D VTF+ ++D  CK G       
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531

Query: 338 ----------------------------KMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                                       K+++A+ +L  M+  G+ P+  T+  LI+G+C
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +   + K+   M+  GC  +V +Y  +IN  C N  VEEA ++   M S G+ P   
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 651

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           TY  L     +  +++RA ++   M +N    +++ Y+  +     SGFVL
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL-----SGFVL 697



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+  T+SILI+  C+ GR+   F +   ++     P+  T+T LIK  C      +A  +
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +    AC P+V TY  LI+ LCR G    A  +F +M         +C P  +T+N +
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNAL 376

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+G CKEG+V  A +L   M+  N  P++ TY  ++ G C  +   +A  L   ++D G+
Sbjct: 377 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD VT+++++D  CK G+++ A  +   M   G+ P+ +T+  LIDG C   +++ A  
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +  SM   G   D V++  LI+ +CK    ++   L+  M+      T  T+N     L 
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 556

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           + +++  A  +  +M +  +     T+   I+G C++G    +L++   ++ +    N+ 
Sbjct: 557 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 616

Query: 500 SYNCLIDGL 508
           +Y  +I+GL
Sbjct: 617 TYTIIINGL 625



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 206/425 (48%), Gaps = 29/425 (6%)

Query: 105 PPVSSFNILFGCLAK-NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P + ++N L   L + +K Y   L L +R+   GL PD  T++IL++ FCK G+++  F 
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +  +   P+  TFT+LI GLC   R+ +A  +           D  T+  LI+G C
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 521

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G       LFE M          C     T+N  +D L K+  +++A  +  KM    
Sbjct: 522 KIGKAKDVCFLFENMVENR------CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 575

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P VVT+T +I G C A +   + ++   M   G  P+V T+++I++ LC NG++++A 
Sbjct: 576 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 635

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M   GV+PN +TY  L+  +    ++D A ++  +M  NGC  +   Y+ L++ +
Sbjct: 636 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695

Query: 404 CKNKDV-----------EEALSLYSE-----MLSKGIK----PTVVTYNTLFLGLFEIHQ 443
             +               +A SL SE      LS  IK    PT   YN L +GL +  +
Sbjct: 696 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGR 755

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A +L  +M ++ +  D    ++ I+  CK+      LE  + + D+K+  +  SY  
Sbjct: 756 IIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCW 814

Query: 504 LIDGL 508
           +I GL
Sbjct: 815 VIHGL 819



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 184/447 (41%), Gaps = 101/447 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++NIL     K    +   ++F  +NSAGL PD +T + LI+  CK+GR+     +
Sbjct: 438 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 497

Query: 165 LGRILRSCFTPNAVTFTSLIKGLC---------------AESRIM--------------- 194
           LG +++   + + VTFT+LI G C                E+R +               
Sbjct: 498 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 557

Query: 195 -----EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                EA A+  K   +   P V T+  LI G CR G T ++L + E M          C
Sbjct: 558 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG------C 611

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR------------- 296
            PN  TY  II+GLC  G V++A+ +   M    ++P+  TY  +++             
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 671

Query: 297 ----------------------GFCYAN---------------------DWNEAKRLFIE 313
                                 GF  +N                     + N+   L  E
Sbjct: 672 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNE 731

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           +   GV P    ++ ++  LCK G++ +A +L + M+  G+ P+    +++I+ YC T K
Sbjct: 732 IKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCK 789

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTV-VTY 431
            D+  +    +  N  +    SY  +I+       V+EA  L S+++   GI+  V VT 
Sbjct: 790 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 849

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNH 458
           +  FL   E    ++ LKL   + + H
Sbjct: 850 SIEFLMKEEEDDPDKCLKLIKAIEQVH 876


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 6/417 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +   M R    PP   S+N++   + +       + +F  +    + P+  T++ +
Sbjct: 45  EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 104

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+   K G +  GF +  +++     PNA+T+  L+ GLC   R+ E +AL  +      
Sbjct: 105 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 164

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD FTY+ L +GL R G +   L+LF +        G        T + +++GLCK+G 
Sbjct: 165 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGK 218

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V  A+E+   + +  + P  V Y ++I G+C   +   A   F +M  + ++PD +T++ 
Sbjct: 219 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 278

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LCK  ++  A  LL  M   GVNP   T+NTLID Y  T +++    +   M+ NG
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +VVSY +++N +CKN  + EA+++  +M  K + P    YN +     E    ++A 
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            L ++M+ N ++    TYN  I GLC    + EA E+  ++ + +   + VSYN LI
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 455



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ILF  L++N     +LSLF +    G+    YT SIL+N  CK G+VS    V
Sbjct: 166 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 225

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   P  V + +LI G C    +  A + F + +    +PD  TYN LINGLC+
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L  EM + NG       P   T+NT+ID   + G ++K   +  +M++  +
Sbjct: 286 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 339

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y S++  FC      EA  +  +M  + V P+   ++ I+D   ++G  D+A  
Sbjct: 340 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 399

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+E M   G++P+  TYN LI G C   +I  A ++  S+ ++  + D VSYNTLI+  C
Sbjct: 400 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 459

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              ++++AL L   M   GIK TV TY+ L  GL    ++     L+ +M +N+V     
Sbjct: 460 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 519

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
            +N  ++   K G  ++A +L + +
Sbjct: 520 IHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 10/404 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P   ++N+L   L +        +L   + S  + PD +T+SIL +   + G    
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              + G+ L++  T    T + L+ GLC + ++  A  +          P    YNTLIN
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C+TG    A + F +M + +       KP+ +TYN +I+GLCK   +  A++L ++M+
Sbjct: 247 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D  +NP V T+ ++I  +       +   +  EM + G++P+VV++  I++  CKNGK+ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  +L+ M  + V PN   YN +ID Y      D A  L   M+SNG    +V+YN LI
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              C    + EA  + + + +  + P  V+YNTL         +++AL L   M +  + 
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 480

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           +   TY+  I GL  +G + E   L++ +  +    N+V  N +
Sbjct: 481 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQN----NVVPSNAI 520



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 5/300 (1%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD F +N  +      G    A+ +   M            PN  +YN +I G+ + 
Sbjct: 22  GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAP-----PPNAFSYNVVIAGMWRA 76

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G    A E+F +M +  + P+ +TY ++I G     D     RL  +M+  G++P+ +T+
Sbjct: 77  GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 136

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +V++  LC+ G+M + S LL+ M  + + P+ +TY+ L DG            LF     
Sbjct: 137 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 196

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NG      + + L+N  CK+  V  A  +   +++ G+ PT V YNTL  G  +  ++E 
Sbjct: 197 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 256

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A   F +M+  H+  D  TYN  I+GLCK+  +  A +L   ++D+     + ++N LID
Sbjct: 257 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 29/340 (8%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           IL   L K+        + + L +AGL P    ++ LIN +C+ G +   F   G++   
Sbjct: 208 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              P+ +T+ +LI GLC   RI  A  L  + +     P V T+NTLI+   RTG     
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 327

Query: 232 LNLFEEMANGNGEFGVV---------CK--------------------PNTVTYNTIIDG 262
             +  EM     +  VV         CK                    PN   YN IID 
Sbjct: 328 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 387

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             + G  D+A  L  KMK   I+P +VTY  +I+G C  +  +EA+ +   + +  + PD
Sbjct: 388 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 447

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            V+++ ++   C  G +DKA  L + M   G+     TY+ LI G     +++    L+ 
Sbjct: 448 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 507

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            M  N  +     +N ++  Y K  +  +A  L  EML K
Sbjct: 508 KMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 8/260 (3%)

Query: 95  DYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           D ++ M  +   P V +FN L     +    +    +   +   GL P++ ++  ++N F
Sbjct: 294 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 353

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G++     +L  +      PNA  + ++I          +A  L  K +     P +
Sbjct: 354 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 413

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LI GLC       A  +   ++N          P+ V+YNT+I   C  G +DKA
Sbjct: 414 VTYNLLIKGLCNQSQISEAEEIINSLSNHR------LIPDAVSYNTLISACCYRGNIDKA 467

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L  +M    I   V TY  +I G   A   NE + L+ +MM   V P     +++++ 
Sbjct: 468 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527

Query: 333 LCKNGKMDKASRLLELMIWR 352
             K G   KA  L + M+ +
Sbjct: 528 YSKYGNEIKAEDLRKEMLQK 547



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 62/152 (40%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           PN+   I    ++ +   P + ++N+L   L           +   L++  L PD  +++
Sbjct: 393 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 452

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  C  G +     +  R+ +        T+  LI GL    R+ E   L+ K    
Sbjct: 453 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 512

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
              P    +N ++    + G+ I A +L +EM
Sbjct: 513 NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 209/412 (50%), Gaps = 6/412 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++R +   P V + + L   LA+ + +  VL LF  L +AG+ PD Y +++++ C C++ 
Sbjct: 180 LMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELK 239

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
             +    ++ +   +  + + VT+   I GLC   R+ EA  +         + D+ TY 
Sbjct: 240 DFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYC 299

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TL+ GLCR     V + + +EM     E G V  P+    + +I+GL K G ++ A EL 
Sbjct: 300 TLVLGLCRIQEFEVGMEMMDEMI----ELGYV--PSEAAVSGLIEGLIKMGSIEGAFELL 353

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            K+    + P++  Y S+I   C      EA+ LF  M ++G+ P+ VT+++++D   + 
Sbjct: 354 NKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRR 413

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            K+D A      MI  G++   Y+YN++I+  C   K+  A  LF  M   G    V +Y
Sbjct: 414 AKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATY 473

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            +LI+ YCK+  V +A  LY EM  KGI P  VT+  L  GL +I+++  A KLFDEM  
Sbjct: 474 TSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVE 533

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  +  TYN  I+G C+ G    A EL   +       +  +Y  LI GL
Sbjct: 534 LKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGL 585



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 197/401 (49%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N+    L K+K     + + + L   GL  D+ T+  L+   C++     G  ++ 
Sbjct: 260 IVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMD 319

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++   + P+    + LI+GL     I  A  L  K       P++F YN++IN LC+TG
Sbjct: 320 EMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTG 379

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  LF  MA    E G+   PN VTY  +IDG  +   +D A   F KM +  I+ 
Sbjct: 380 KLEEAELLFSVMA----ERGL--NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V +Y S+I   C       A+ LF EM+D+G++P V T++ ++   CK+G + KA +L 
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  +G+ PNT T+  LI G C  +K+  A KLF  M     + + V+YN LI  +C+ 
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            +   A  L  EM+ KG+ P   TY  L  GL    +V  A +  +++   H   D   Y
Sbjct: 554 GNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCY 613

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              + G CK G + EAL   + +     ++++VSY  LI G
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG 654



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 204/440 (46%), Gaps = 46/440 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+N +  C  K         LFK +   GL P + T++ LI+ +CK G V   F +  
Sbjct: 435 VYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYH 494

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN VTFT+LI GLC  +++ EA+ LF +       P+  TYN LI G CR G
Sbjct: 495 EMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREG 554

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +T  A  L +EM            P+T TY  +I GLC  G V +AKE    +  ++   
Sbjct: 555 NTTRAFELLDEMIKKG------LSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL 608

Query: 287 DVVTYTSVIRGFCYANDWNEAK----------------------------------RLFI 312
           D + YT++++GFC      EA                                    L  
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLR 668

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM  +G+QPD V +++++D   K+G + KA     +MI  G  PN+ TY  L++G     
Sbjct: 669 EMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAG 728

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            ++ A+ LF  M     + + ++Y   ++   K  ++E AL L++ ML +G     VTYN
Sbjct: 729 YVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYN 787

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-----R 487
            L  G  +I + + A KL D M    +  D  TY+ FI   CK G V  A++++     R
Sbjct: 788 ILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQR 847

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            ++  +   N + + C ++G
Sbjct: 848 GLKPDRVVFNFLIHACCLNG 867



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 214/484 (44%), Gaps = 77/484 (15%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+ +   P   +   ++ G L K    +    L  ++   G+ P+++ ++ +IN  
Sbjct: 317 MMDEMIELGYVPSEAAVSGLIEG-LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSL 375

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G++    ++   +      PN VT+T LI G    +++  A   F K         V
Sbjct: 376 CKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATV 435

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           ++YN++IN  C+ G   +A  LF+EM +         KP   TY ++I G CK+G V KA
Sbjct: 436 YSYNSMINCQCKFGKMKMAELLFKEMVDKG------LKPTVATYTSLISGYCKDGLVPKA 489

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L+ +M  + I P+ VT+T++I G C  N   EA +LF EM++  + P+ VT++V+++ 
Sbjct: 490 FKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYN------------------------------ 362
            C+ G   +A  LL+ MI +G++P+TYTY                               
Sbjct: 550 HCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLD 609

Query: 363 -----TLIDGYCLTDKIDHAR----------------------------------KLFVS 383
                 L+ G+C   +I  A                                   +L   
Sbjct: 610 ELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLRE 669

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   D V Y  LI+ + K+ ++++A   +  M+ +G  P  VTY  L  GLF+   
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V  A  LF  M       +  TY  F+D L K G +  AL+L  A+    +  N V+YN 
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTVTYNI 788

Query: 504 LIDG 507
           LI G
Sbjct: 789 LIRG 792



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 198/400 (49%), Gaps = 6/400 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S F++L     +NK     + +   +   GL P++ T S L+N   ++ +      +   
Sbjct: 156 SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDT 215

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++ +   P+   +T ++K LC      +A  +  +     C   + TYN  INGLC++  
Sbjct: 216 LVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKR 275

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+    E+    GE G+  K + VTY T++ GLC+    +   E+  +M +    P 
Sbjct: 276 VWEAV----EVKRSLGEKGL--KADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPS 329

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
               + +I G         A  L  ++   GV P++  ++ +++ LCK GK+++A  L  
Sbjct: 330 EAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFS 389

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           +M  RG+NPN  TY  LIDG+    K+D A   F  M   G    V SYN++IN  CK  
Sbjct: 390 VMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFG 449

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            ++ A  L+ EM+ KG+KPTV TY +L  G  +   V +A KL+ EM    +A +T T+ 
Sbjct: 450 KMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFT 509

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             I GLC+   + EA +LF  + + K   N V+YN LI+G
Sbjct: 510 ALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 188/387 (48%), Gaps = 9/387 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M+ +   P  V+ +N+L     +  +      L   +   GL PD YT+  L
Sbjct: 523 EASKLFDEMVELKILPNEVT-YNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPL 581

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C  GRVS     +  +       + + +T+L++G C E RI EA     +      
Sbjct: 582 IAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGL 641

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D+ +Y  LI+G       I+   L  EM +G G      +P+ V Y  +IDG  K G 
Sbjct: 642 QMDLVSYAVLISGALNQNDRIL-FELLREM-HGKG-----MQPDNVIYTILIDGFIKSGN 694

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KA E +  M  E   P+ VTYT+++ G   A   NEAK LF  M+     P+ +T+  
Sbjct: 695 LKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGC 754

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L K G M+ A +L   M+ +G   NT TYN LI GYC   K   A KL   M   G
Sbjct: 755 FLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIG 813

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D ++Y+T I  YCK  +V+ A+ ++  ML +G+KP  V +N L        +++RAL
Sbjct: 814 MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRAL 873

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCK 475
           +L ++M    +     TY++ +  L +
Sbjct: 874 QLRNDMMLRGLKPTQSTYHSLMVQLAQ 900



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N +   L K    +    LF  +   GL P+  T++ILI+ F +  ++   F  
Sbjct: 363 PNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYY 422

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++    +    ++ S+I   C   ++  A  LF +      +P V TY +LI+G C+
Sbjct: 423 FNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCK 482

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L+ EM  G G       PNTVT+  +I GLC+   + +A +LF +M +  I
Sbjct: 483 DGLVPKAFKLYHEMT-GKG-----IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKI 536

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY  +I G C   +   A  L  EM+ +G+ PD  T+  ++  LC  G++ +A  
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +  +  +    +   Y  L+ G+C   +I  A      M   G   D+VSY  LI+   
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGAL 656

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              D      L  EM  KG++P  V Y  L  G  +   +++A + +  M       ++ 
Sbjct: 657 NQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   ++GL K+G+V EA  LF+ +   +   N ++Y C +D L
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHL 759



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 28/254 (11%)

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
           A N++   +  L + ++  G+ PD   ++ILI+ F K G +   F     ++   + PN+
Sbjct: 655 ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           VT+T+L+ GL     + EA  LF +  V    P+  TY   ++ L + G+   AL L   
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA 774

Query: 238 MANGN-----------------GEF-----------GVVCKPNTVTYNTIIDGLCKEGFV 269
           M  G+                 G+F           G+   P+ +TY+T I   CK G V
Sbjct: 775 MLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV 834

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A +++  M    + PD V +  +I   C   + + A +L  +MM +G++P   T+  +
Sbjct: 835 DAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSL 894

Query: 330 MDELCKNGKMDKAS 343
           M +L +  ++ +  
Sbjct: 895 MVQLAQRARLTQVQ 908



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 75/148 (50%)

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           ++ LI  Y    ++     +   M   G + +V + + L+N   + +   + L L+  ++
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           + G+KP    Y  +   L E+    +A ++ ++   N  +    TYN FI+GLCKS  V 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA+E+ R++ +   + ++V+Y  L+ GL
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGL 305



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 4/183 (2%)

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F +++    +N ++     ++ LM   G+ P   T + L++      K     +LF ++ 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           + G   D   Y  ++   C+ KD  +A  + ++    G   ++VTYN    GL +  +V 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+++   +    + AD  TY   + GLC+    ++  E+   + D   EL  V     +
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCR----IQEFEVGMEMMDEMIELGYVPSEAAV 333

Query: 506 DGL 508
            GL
Sbjct: 334 SGL 336


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 207/418 (49%), Gaps = 6/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  +F+ M +     P   +++IL   L +    +    L + +   G  P   T+++
Sbjct: 223 GEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTV 282

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C +G       +L  +      PN  T+T LI  LC E +I EA  +F K     
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + T+N LING C+ G  + A  L   M  GN      CKPN  TYN +++GLC+  
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVS 396

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              KA  L  ++ D  + PD VTY  ++ GFC     N A  +F  M   G++PD  TF+
Sbjct: 397 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 456

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LCK G++++A+ +L  M+ +G++ +  T+  LIDG+C   K      LF +M  N
Sbjct: 457 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 516

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C+    ++N  ++   K+  + EA ++  +M+  G+ P+VVT+  L  G     +   +
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 576

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           LK+ + M++   + + YTY   I+GLC +G V EA  +  ++       N  +Y  L+
Sbjct: 577 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 634



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 14/441 (3%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            L + C+ S  G + L+   + +    + L    S P    ++ L  CLAK         
Sbjct: 105 LLIQECEDSENGVVKLMGALDGMTELGFRL----SYP---CYSTLLMCLAKLNMGFVAFL 157

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           +++R+ + G       +  ++N  CK G V    +   ++LR  F  +    TSL+   C
Sbjct: 158 VYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANC 217

Query: 189 AESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
               + EA  +F K  +   C P+  TY+ LI+GLC  G    A  L +EM         
Sbjct: 218 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG----- 272

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C+P+T TY  +I   C  G  DKA ++  +M  +   P+V TYT +I   C      EA
Sbjct: 273 -CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +F +M+  G+ P ++TF+ +++  CK G +  A +LL +M      PN  TYN L++G
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   K   A  L   +  NG + D V+YN L++ +CK   +  A ++++ M S G++P 
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             T+  L  GL ++ ++E+A  +   M +  ++ D  T+   IDG CK G   +   LF 
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            + +++      ++NC +D L
Sbjct: 512 NMVENRCLTTAHTFNCFLDAL 532



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 217/447 (48%), Gaps = 20/447 (4%)

Query: 41  NEPSYPTTTSKLKESLRLTVKDRASLKKFLKER-CKSSGQGDINLITPNEALCIFDYMLR 99
           N  +Y      L E+ RL  ++   LK+ + E+ C+ S +    LI     + + D  ++
Sbjct: 241 NSVTYSILIHGLCEAGRL--EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMK 298

Query: 100 M------HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           M          P V ++ IL   L +    +    +F+++   GL P I T + LIN +C
Sbjct: 299 MLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC 358

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K G V   F +L  + +    PN  T+  L++GLC  S+  +A  L  +       PD  
Sbjct: 359 KEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRV 418

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYN L++G C+ G   +A N+F  M +   E      P+  T+  +IDGLCK G +++A 
Sbjct: 419 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQAN 472

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +   M  + I+ D VT+T++I G C      +   LF  M++        TF+  +D L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 532

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ K+++A+ +L  M+  G+ P+  T+  LI+G+C   +   + K+   M+  GC  +V
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +Y  +IN  C N  VEEA ++   M S G+ P   TY  L     +  +++RA ++   
Sbjct: 593 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVL 480
           M +N    +++ Y+  +     SGFVL
Sbjct: 653 MVKNGCQPNSHIYSALL-----SGFVL 674



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+  T+SILI+  C+ GR+   F +   ++     P+  T+T LIK  C      +A  +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +    AC P+V TY  LI+ LCR G    A  +F +M         +C P  +T+N +
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNAL 353

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+G CKEG+V  A +L   M+  N  P++ TY  ++ G C  +   +A  L   ++D G+
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PD VT+++++D  CK G+++ A  +   M   G+ P+ +T+  LIDG C   +++ A  
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +  SM   G   D V++  LI+ +CK    ++   L+  M+      T  T+N     L 
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           + +++  A  +  +M +  +     T+   I+G C++G    +L++   ++ +    N+ 
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 593

Query: 500 SYNCLIDGL 508
           +Y  +I+GL
Sbjct: 594 TYTIIINGL 602



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 11/384 (2%)

Query: 105 PPVSSFNILFGCLAK-NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P + ++N L   L + +K Y   L L +R+   GL PD  T++IL++ FCK G+++  F 
Sbjct: 380 PNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +  +   P+  TFT+LI GLC   R+ +A  +           D  T+  LI+G C
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 498

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G       LFE M          C     T+N  +D L K+  +++A  +  KM    
Sbjct: 499 KIGKAKDVCFLFENMVENR------CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P VVT+T +I G C A +   + ++   M   G  P+V T+++I++ LC NG++++A 
Sbjct: 553 LVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M   GV+PN +TY  L+  +    ++D A ++  +M  NGC  +   Y+ L++ +
Sbjct: 613 TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 672

Query: 404 CKNKDV--EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             +       ALS   ++ ++ +       N L   +F +  V+ ALK+ DE+++  V  
Sbjct: 673 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPT 732

Query: 462 DTYTYNNFIDGLCKSGFVLEALEL 485
           +   YN  + GLCK G ++EA +L
Sbjct: 733 EDL-YNFLVVGLCKEGRIIEADQL 755



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 185/464 (39%), Gaps = 119/464 (25%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++NIL     K    +   ++F  +NSAGL PD +T + LI+  CK+GR+     +
Sbjct: 415 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGI 474

Query: 165 LGRILRSCFTPNAVTFTSLIKGLC---------------AESRIM--------------- 194
           LG +++   + + VTFT+LI G C                E+R +               
Sbjct: 475 LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGK 534

Query: 195 -----EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                EA A+  K   +   P V T+  LI G CR G T ++L + E M          C
Sbjct: 535 DYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG------C 588

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN------------------------ 285
            PN  TY  II+GLC  G V++A+ +   M    ++                        
Sbjct: 589 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 648

Query: 286 -----------PDVVTYTSVIRGFCYAN-------------------------------- 302
                      P+   Y++++ GF  +N                                
Sbjct: 649 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH 708

Query: 303 -----DWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                D + A ++  E+   GV   D+  F V+   LCK G++ +A +L + M+  G+ P
Sbjct: 709 VFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVV--GLCKEGRIIEADQLTQDMVKHGLFP 766

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +    +++I+ YC T K D+  +    +  N  +    SY  +I+       V+EA  L 
Sbjct: 767 DK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 825

Query: 417 SEMLSK-GIKPTV-VTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           S+++   GI+  V VT +  FL   E    ++ LKL   + + H
Sbjct: 826 SDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVH 869


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 211/420 (50%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  + D M      P  V   N++ G + +  + D    + K + +AG+ P+  T+  
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLIDGFM-REGNADEAFKMIKEMVAAGVQPNKITYDN 262

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CKMG++    ++L +++R    P+ +T+  +I+G        +A  L ++     
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAG 322

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V+TY+ +I+GLC++G    A +L EEM           KPN   Y  +I G C+EG
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREG 376

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+F KM   N+ PD+  Y S+I G        E+ + F +M ++G+ P+  T+S
Sbjct: 377 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 436

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++    KNG ++ A +L++ M+  G+ PN   Y  L++ Y  +D I+     F SM   
Sbjct: 437 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 496

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G M D   Y  LI+    + ++E A  + SE+   G  P V  Y++L  GL +    E+A
Sbjct: 497 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKA 556

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             + DEM +  V  +   YN  IDGLCKSG +  A  +F +I       N V+Y  LIDG
Sbjct: 557 FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 209/440 (47%), Gaps = 44/440 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N++     ++ +      L   + +AG+ P++YT+SI+I+  C+ G       +
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNA  +  LI G C E  +  A  +F K       PD++ YN+LI GL +
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    +   F +M     E G++  PN  TY+ +I G  K G ++ A++L  +M D  +
Sbjct: 410 VGRVEESTKYFAQMQ----ERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ------------------------ 320
            P+ V Y  ++  +  ++D  +    F  M+DQGV                         
Sbjct: 464 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523

Query: 321 -----------PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                      PDV  +S ++  LCK    +KA  +L+ M  +GV+PN   YN LIDG C
Sbjct: 524 VLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 583

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            +  I +AR +F S+ + G + + V+Y +LI+  CK  D+  A  LY+EML+ GI P   
Sbjct: 584 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            Y+ L  G      +E+A+ L +EM  R H  A   ++NN +DG CK G + E L+L   
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHV 701

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I       N ++   +I GL
Sbjct: 702 IMGRGLVPNALTIENIISGL 721



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 211/474 (44%), Gaps = 76/474 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L     K + +DT   +   +   G   +  T+++LI   C+ G V   F  
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T+ +LI GLC   R  EA AL  +      +P+V  Y  LI+G  R
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  + +EM           +PN +TY+ ++ GLCK G +D+A  L  +M  ++ 
Sbjct: 235 EGNADEAFKMIKEMVAAG------VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY  +I G    ++  +A RL  EM + G+ P+V T+S+++  LC++G+ +KAS 
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYC--------------------LTD------------ 372
           LLE M  +G+ PN + Y  LI GYC                    L D            
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 373 ---KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++ + K F  M+  G + +  +Y+ LI+ Y KN D+E A  L   ML  G+KP  V
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 468

Query: 430 TYNTLFLGLFEIHQVER-----------------------------------ALKLFDEM 454
            Y  L    F+   +E+                                   A ++  E+
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEI 528

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +N    D + Y++ I GLCK+    +A  +   +     + NIV YN LIDGL
Sbjct: 529 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 213/427 (49%), Gaps = 22/427 (5%)

Query: 97  MLRMHPSPPPV----------------SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           M+R +PSPP V                +  ++L     K+        +   +   GL P
Sbjct: 21  MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAP 80

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
            I   + L+    +   ++  + V   ++ +  +P+  T+++LI+  C       A  + 
Sbjct: 81  SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 140

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + R   C  +  TYN LI GLCR+G    A    ++M     ++G+V  P+  TY  +I
Sbjct: 141 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME----DYGLV--PDGFTYGALI 194

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +GLCK    ++AK L  +M    + P+VV Y ++I GF    + +EA ++  EM+  GVQ
Sbjct: 195 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 254

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+ +T+  ++  LCK G+MD+AS LL+ M+     P+T TYN +I+G+        A +L
Sbjct: 255 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRL 314

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              ME+ G   +V +Y+ +I+  C++ + E+A  L  EM +KG+KP    Y  L  G   
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
              V  A ++FD+M + +V  D Y YN+ I GL K G V E+ + F  +++     N  +
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434

Query: 501 YNCLIDG 507
           Y+ LI G
Sbjct: 435 YSGLIHG 441



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 211/452 (46%), Gaps = 65/452 (14%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IFD M +++  P      +++FG L+K    +     F ++   GL P+ +T+S LI+ +
Sbjct: 384 IFDKMTKVNVLPDLYCYNSLIFG-LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI---------------------KGLCAES 191
            K G +     ++ R+L +   PN V +  L+                     +G+  ++
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502

Query: 192 RI-------------MEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           RI             MEAA  + ++       PDV  Y++LI+GLC+T     A  + +E
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M+           PN V YN +IDGLCK G +  A+ +F  +  + + P+ VTYTS+I G
Sbjct: 563 MSKKG------VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C   D + A  L+ EM+  G+ PD   +SV+       G +++A  L+E M  RG + +
Sbjct: 617 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HAS 675

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             ++N L+DG+C   K+    KL   +   G + + ++   +I+   +   + E  +++ 
Sbjct: 676 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 735

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH---------------VAAD 462
           E+  K  +     +++LF+ +  I+Q +  L + D+M R+H               + A 
Sbjct: 736 ELQQKTSESAARHFSSLFMDM--INQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 793

Query: 463 TY-----TYNNFIDGLCKSGFVLEALELFRAI 489
           +      +Y   +D LC+ G + EAL L + +
Sbjct: 794 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 138/327 (42%), Gaps = 29/327 (8%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V  ++ L   L K    +    +   ++  G+ P+I  ++ LI+  CK G +S+  
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   IL     PN VT+TSLI G C    I  A  L+ +       PD F Y+ L  G 
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 223 CRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
              G    A+ L EEM   G+            ++N ++DG CK G + +  +L   +  
Sbjct: 653 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 704

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIE-------------------MMDQGVQPD 322
             + P+ +T  ++I G   A   +E   +F+E                   M++QG  P 
Sbjct: 705 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            V   +I D  CK G +DKA  L ++++ +       +Y  ++D  C   K+  A  L  
Sbjct: 765 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 823

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDV 409
            M+  G +   +     I W+ ++  +
Sbjct: 824 EMDKRGNLQPTLVALLGIFWFRRHHHI 850


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 211/421 (50%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ IF+ M   + + P   ++N +         +D   SL +R  + G  P +  ++ 
Sbjct: 320 DEAVEIFEQM-EQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ C  K GR+         + +    PN  T+  LI  LC    +  A  +    +   
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +I+ LC+      A ++FE M +       +C P+ VT+ ++IDGL K+G
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK------ICSPDEVTFCSLIDGLGKQG 491

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A  L+ +M D +  P+ V YTS+I+ F       +  ++F EM+ +G  PD+   +
Sbjct: 492 RVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+  K   L E +  RG  P+  +Y+ LI G           +LF +M+  
Sbjct: 552 AYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ 611

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YNT I+ +CK+  V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 612 GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E + N +  +   Y++ IDG  K G + EA  +   +       N+ ++NCL+D 
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731

Query: 508 L 508
           L
Sbjct: 732 L 732



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 191/399 (47%), Gaps = 7/399 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N+   C  K    D     F  + S GL PD  T++ +I   CK  R+     +  ++ 
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           ++   P A  + ++I G  +  +  EA +L  + +   C P V  YN ++  L + G   
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            AL  FEEM            PN  TYN +ID LCK G V+ A ++   MK+  + P+V+
Sbjct: 391 EALRTFEEMKKD-------AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM 443

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T   +I   C A   +EA  +F  M  +   PD VTF  ++D L K G++D A RL E M
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           +     PN   Y +LI  +    + +   K+F  M   GC  D+   N  ++   K  + 
Sbjct: 504 LDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGET 563

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            +  +L+ E+ S+G  P V++Y+ L  GL +        +LF  M+      DT+ YN F
Sbjct: 564 GKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTF 623

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           IDG CKSG V +A +L   ++    +  +V+Y  +IDGL
Sbjct: 624 IDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 212/439 (48%), Gaps = 41/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + NI+   L K K  D   S+F+ +N     PD  T   LI+   K GRV   + +
Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499

Query: 165 LGRILRSCFTPNAVTFTSLIK---------------------GLCAESRIMEA------- 196
             ++L S   PNAV +TSLIK                     G   + R++ A       
Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFK 559

Query: 197 -------AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                   ALF + +     PDV +Y+ LI+GL + G       LF  M          C
Sbjct: 560 AGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG------C 613

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             +T  YNT IDG CK G V+KA +L  +MK +   P VVTY SVI G    +  +EA  
Sbjct: 614 VLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYM 673

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF E    G++ +VV +S ++D   K G++D+A  ++E ++ +G+ PN YT+N L+D   
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             ++I+ A   F +M++     + ++Y+ LIN  C+ +   +A   + EM  +G+KP  +
Sbjct: 734 KAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY T+  GL +   +  A  LF+  + N    D+ +YN  I+GL  S   +EA ++F   
Sbjct: 794 TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEET 853

Query: 490 RDSKYELNIVSYNCLIDGL 508
           R     ++  +   L+D L
Sbjct: 854 RMKGCNIHTKTCIALLDAL 872



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 187/411 (45%), Gaps = 7/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P  S++  L G L+  +  D +L+LF ++   G    ++  + +I  F + GR
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGR 248

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +L  +  +C   + V +   I       ++  A   F + +     PD  TY +
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           +I  LC+      A+ +FE+M            P    YNT+I G    G  D+A  L  
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRN------VPCAYAYNTMIMGYGSAGKFDEAYSLLE 362

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           + K     P V+ Y  ++          EA R F E M +   P++ T++V++D LCK G
Sbjct: 363 RQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF-EEMKKDAAPNLSTYNVLIDMLCKAG 421

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +++ A ++ + M   G+ PN  T N +ID  C   K+D A  +F  M    C  D V++ 
Sbjct: 422 EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFC 481

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           +LI+   K   V++A  LY +ML     P  V Y +L    F+  + E   K+F EM   
Sbjct: 482 SLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             + D    N ++D + K+G   +   LF  I+   +  +++SY+ LI GL
Sbjct: 542 GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 190/420 (45%), Gaps = 11/420 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A+  F +  R         +++ L   +AKN  +D    +   ++ AG  P   T   
Sbjct: 109 NQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIE 168

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA--ESRIMEAAALFTKHRV 205
           LI    K  ++  GF ++  + +  F P    +T+LI  L +  ES IM    LF + + 
Sbjct: 169 LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIM--LTLFHQMQE 226

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              E  V  + T+I    R G    AL+L +EM +           + V YN  ID   K
Sbjct: 227 LGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN------CLHADIVLYNVCIDCFGK 280

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G VD A + F ++K   + PD VTYTS+I   C  N  +EA  +F +M      P    
Sbjct: 281 AGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYA 340

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++      GK D+A  LLE    RG  P+   YN ++       ++  A + F  M+
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK 400

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +    ++ +YN LI+  CK  +VE A  +   M   G+ P V+T N +   L +  +++
Sbjct: 401 KDAA-PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLD 459

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A  +F+ M     + D  T+ + IDGL K G V +A  L+  + DS    N V Y  LI
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLI 519



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 150/308 (48%), Gaps = 6/308 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S++IL   L K         LF  +   G   D + ++  I+ FCK G+V+  + +
Sbjct: 580 PDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL 639

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P  VT+ S+I GL    R+ EA  LF + +    E +V  Y++LI+G  +
Sbjct: 640 LEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK 699

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  + EE+            PN  T+N ++D L K   +++A   F  MK+   
Sbjct: 700 VGRIDEAYLIMEELMQKG------LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ +TY+ +I G C    +N+A   + EM  QG++P+ +T++ ++  L K G + +AS 
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASS 813

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E     G  P++ +YN +I+G   + +   A K+F      GC     +   L++   
Sbjct: 814 LFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQ 873

Query: 405 KNKDVEEA 412
           K++ +E+A
Sbjct: 874 KDECLEQA 881



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 40/315 (12%)

Query: 230 VALNLFEEMANGNGEFGVVC-KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           V  + FE++    GE  +    P+T T   +I    K   + +  +L   M+     P  
Sbjct: 142 VKFDYFEQIL---GEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAF 198

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             YT++I       + +    LF +M + G +  V  F+ ++    + G++D A  LL+ 
Sbjct: 199 SAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M    ++ +   YN  ID +    K+D A K F  ++S+G + D V+Y ++I   CK   
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLG------------LFEIHQVE----------- 445
           ++EA+ ++ +M      P    YNT+ +G            L E  +             
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 446 ------------RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
                        AL+ F+EM+++  A +  TYN  ID LCK+G V  A ++  A++++ 
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKKD-AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 494 YELNIVSYNCLIDGL 508
              N+++ N +ID L
Sbjct: 438 LFPNVMTVNIMIDRL 452


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 200/390 (51%), Gaps = 9/390 (2%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           +N+  D+   +F R++  G  P+  T+S LIN  C  GRV+     +  + R    P   
Sbjct: 275 RNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVH 334

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           TFT+ I  LC   RI +A  +F   +   C+P+V+TY +LI+G      + +A+ LF  M
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRM 391

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
           +      GVV  PNTVTYN +++ L +   +D A  +F  M      P+  +Y  +IRG+
Sbjct: 392 SRD----GVV--PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGY 445

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C   D  +A  +   M+     P +VT+++I+   C +G  D A R+LELM   G  P+ 
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           ++Y  LI G+C   K++ A  +F  M   G   + V+Y  LI+ YCK++ ++ A  +   
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLER 565

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M   G +P V TYN L  GL + +    A +L   M    ++ D  TY+  I+GLC +G 
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA 625

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  ALE+F  +       N+ +Y+ LI  L
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 204/421 (48%), Gaps = 10/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL     M R H   P V +F      L      +    +F  +   G  P++YT++ 
Sbjct: 315 NEALDFISEMTR-HGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   ++ R++ G  +  R+ R    PN VT+ +L+  L     I  A  +F       
Sbjct: 374 LISGQ-RVSRMAIG--LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  +YN LI G C  G T  A+++   M  G         P  VTYN II G C  G
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP------TPTLVTYNIIIKGYCDSG 484

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D A  +   MK     PD  +YT +I GFC  +    A  +F EMMD+G+ P+ VT++
Sbjct: 485 DTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYT 544

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK+ K+D A+R+LE M   G  PN  TYN LI G    +    A +L   M   
Sbjct: 545 ALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEE 604

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               DVV+Y+T+IN  C N  +  AL ++++M+  G  P + TY++L   L +  +VE A
Sbjct: 605 KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEA 664

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++F E+++  +  D  TY   I+    SG V  A +    + ++  +  + +Y+ LI G
Sbjct: 665 EEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724

Query: 508 L 508
           L
Sbjct: 725 L 725



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 214/435 (49%), Gaps = 44/435 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L K     TV+  + ++   GL P++  ++ +IN  CK G V     ++ ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +S   P+  T+TS+I G C    +  A  +F +     CEP+  TY+TLINGLC +G  
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL+   EM       GV+  P   T+   I  LC  G ++ A ++F+ MK +   P+V
Sbjct: 315 NEALDFISEMT----RHGVL--PTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNV 368

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYTS+I G   +     A  LF  M   GV P+ VT++ +M+ L +N ++D A  +  +
Sbjct: 369 YTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNM 425

Query: 349 MIWRGVNPNTYTYNTLIDGYC-----------LTDKI----------------------- 374
           M   G  PNT +YN LI GYC           LT+ +                       
Sbjct: 426 MGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD 485

Query: 375 -DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            D A ++   M++NGC  D  SY  LI+ +CK   +E A  +++EM+ +G+ P  VTY  
Sbjct: 486 TDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTA 545

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +  +++ A ++ + M+R+    +  TYN  I GL K      A EL + + + K
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605

Query: 494 YELNIVSYNCLIDGL 508
              ++V+Y+ +I+GL
Sbjct: 606 ISPDVVTYSTVINGL 620



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 184/366 (50%), Gaps = 9/366 (2%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           ++T++ L+    K+   S       +ILR    PN + + S+I  LC +  + +A ++  
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K      +PD FTY ++I G CR      A  +F  M     E G  C+PN  TY+T+I+
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM----DEEG--CEPNAATYSTLIN 306

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC  G V++A +   +M    + P V T+T+ I   C      +A ++FI+M  +G +P
Sbjct: 307 GLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKP 366

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +V T++ ++    +  +M  A  L   M   GV PNT TYN L++      +ID A  +F
Sbjct: 367 NVYTYTSLISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M  +GC+ +  SYN LI  YC   D E+A+S+ + ML     PT+VTYN +  G  + 
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDS 483

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
              + A+++ + M+ N    D ++Y   I G CK   +  A  +F  + D     N V+Y
Sbjct: 484 GDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTY 543

Query: 502 NCLIDG 507
             LI G
Sbjct: 544 TALISG 549



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 202/443 (45%), Gaps = 31/443 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +   ML+  P+P  V+ +NI+      +   D  + + + + + G  PD ++++ L
Sbjct: 453 KAMSMLTNMLKGRPTPTLVT-YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK+ ++     +   ++     PN VT+T+LI G C + ++  AA +  + +   C
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V TYN LI+GL +  +   A  L + M            P+ VTY+T+I+GLC  G 
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK------ISPDVVTYSTVINGLCNNGA 625

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A E+F KM      P++ TY+S+I+         EA+ +F E+  QG+ PD VT+  
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVK 685

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++    +GK+D+A   L  MI  G  P   TY+ LI G    + + H      +  S  
Sbjct: 686 MIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLVALPNAASTS 744

Query: 389 CM------HDVVS-----------------YNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
                    DV+S                 Y+ L++   ++    EA +LY  M+S+   
Sbjct: 745 TFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQC 804

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P   TY    + L    +V+ A+ +F  M           Y   I  LC+     EA  +
Sbjct: 805 PNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFV 864

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           F  +       + + +  LI+GL
Sbjct: 865 FEKMLSRALNADEIVWTILINGL 887



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 9/202 (4%)

Query: 311 FIEMMDQ-GVQPDVVTFSVIMDELCK----NGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +++M  Q G +  + T++ ++ +L K    +  MD+  ++L      G+ PN   YN++I
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILR----EGLQPNLLIYNSVI 235

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +  C    +  A  +   +  +G   D  +Y ++I  YC+N+D++ A  +++ M  +G +
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P   TY+TL  GL    +V  AL    EM R+ V    +T+   I  LC  G + +A ++
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
           F  ++    + N+ +Y  LI G
Sbjct: 356 FIDMKKKGCKPNVYTYTSLISG 377



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 29/297 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +F+ M++ H   P + +++ L   L +    +    +F  L   GL PD  T+  +I
Sbjct: 629 ALEMFNKMVK-HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
                 G+V   F  LG ++ +   P   T+  LIKGL  E    +  AL         +
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFD 747

Query: 210 PDVFT----------------------YNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
             +                        Y+ L++ L R+G    A NL+  M + +     
Sbjct: 748 DQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQ---- 803

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C PN  TY   +  L +   VD A ++F  M D+     +  Y  +I   C  +   EA
Sbjct: 804 -C-PNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEA 861

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           + +F +M+ + +  D + ++++++ L   G  D     L +M     NP+++    L
Sbjct: 862 RFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 2/180 (1%)

Query: 309 RLFIEMMDQGVQPDVVTFSVI-MDELCKN-GKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           ++ + +++   +P  V  + I M + C N  +M +A   L++   RG     +TY TL+ 
Sbjct: 142 KVAMRLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLI 201

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                +        +  +   G   +++ YN++IN  CK+ +V +A S+ +++   G+KP
Sbjct: 202 QLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKP 261

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              TY ++ LG      ++ A ++F+ M       +  TY+  I+GLC SG V EAL+  
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFI 321



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 404 CKNK-DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           C NK ++ +AL+       +G K  + TY TL + L +++     +  + ++ R  +  +
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              YN+ I+ LCK G V +A  +   +  S  + +  +Y  +I G
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILG 272


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 207/399 (51%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L   +  D  + LF ++     +P + T+++LI   C   R S    ++  +
Sbjct: 290 AYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM 349

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN  T+T LI  LC++ ++ +A  L  +       P+V TYN LING C+ G  
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ E M + N       +PNT TYN +I G CK   V KA  +  KM +  + PDV
Sbjct: 410 EDALDVVELMESRN------LRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDV 462

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY S+I G C + +++ A RL   M D+G+ PD  T++ ++D LCK+ ++++A  L + 
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           +  + V PN   Y  LIDGYC   K++ A  +   M S  C+ + +++N LI+  C +  
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++EA  L  +M+   ++PTV T   L   L +    + A + F +M  +    D +TY  
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           FI   C+ G + +A ++   ++++    ++ +Y+ LI G
Sbjct: 643 FIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKG 681



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 206/402 (51%), Gaps = 7/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  +N L   LA+    D +  ++  +    + P+IYT++ ++N +CK+G V      + 
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            I+ +   P+  T+TSLI G C    +  A  +F +  +  C  +   Y  LI+GLC   
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A++LF +M + +      C P   TY  +I  LC      +A  L  +M+++ I P
Sbjct: 303 RIDEAMDLFVKMKDDD------CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKP 356

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++ TYT +I   C      +A+ L  +M+++G+ P+V+T++ +++  CK G ++ A  ++
Sbjct: 357 NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV 416

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           ELM  R + PNT TYN LI GYC  + +  A  +   M     + DVV+YN+LI+  C++
Sbjct: 417 ELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            + + A  L S M  +G+ P   TY ++   L +  +VE A  LFD + +  V  +   Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              IDG CK+G V EA  +   +       N +++N LI GL
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 194/404 (48%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L   L  ++     L+L K +   G+ P+I+T+++LI+  C   ++     +
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG++L     PN +T+ +LI G C    I +A  +          P+  TYN LI G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                   N+ + M   N        P+ VTYN++IDG C+ G  D A  L   M D  +
Sbjct: 441 R-------NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TYTS+I   C +    EA  LF  +  + V P+VV ++ ++D  CK GK+++A  
Sbjct: 494 VPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHL 553

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE M+ +   PN+ T+N LI G C   K+  A  L   M        V +   LI+   
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLL 613

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ D + A   + +MLS G KP   TY T         +++ A  +  +M+ N V+ D +
Sbjct: 614 KDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLF 673

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY++ I G    G    A  + + + D+  E +  ++  LI  L
Sbjct: 674 TYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 196/422 (46%), Gaps = 25/422 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  +   L K+K  +    LF  L    + P++  ++ LI+ +CK G+V+   ++
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L     PN++TF +LI GLC + ++ EA  L  K      +P V T   LI+ L +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLK 614

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A   F++M +         KP+  TY T I   C+EG +  A+++  KMK+  +
Sbjct: 615 DGDFDHAYRRFQQMLSSG------TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGV 668

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC--KNGKM--- 339
           +PD+ TY+S+I+G+      N A  +   M D G +P   TF  ++  L   K GK+   
Sbjct: 669 SPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGG 728

Query: 340 -------------DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
                        D    LLE M+  GV PN  +Y  L+ G C    +  A K+F  M+ 
Sbjct: 729 EPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQ 788

Query: 387 N-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G     + +N L++  CK +   EA  +  +M+  G  P + +   L   L++  + E
Sbjct: 789 KEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKE 848

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           R   +F  + +     D   +   IDG+ K G V    ELF  +  +    +  +Y+ LI
Sbjct: 849 RGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908

Query: 506 DG 507
           +G
Sbjct: 909 EG 910



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 192/437 (43%), Gaps = 50/437 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ +L   L      +    L  ++   GL P++ T++ LIN +CK G +     V
Sbjct: 356 PNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDV 415

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN  T+  LIKG C  + + +A  +  K       PDV TYN+LI+G CR
Sbjct: 416 VELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474

Query: 225 TGHTIVALNLFEEMANGNG----------EFGVVCK--------------------PNTV 254
           +G+   A  L   M N  G              +CK                    PN V
Sbjct: 475 SGNFDSAYRLLSLM-NDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y  +IDG CK G V++A  +  KM  +N  P+ +T+ ++I G C      EA  L  +M
Sbjct: 534 MYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKM 593

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +   +QP V T ++++  L K+G  D A R  + M+  G  P+ +TY T I  YC   ++
Sbjct: 594 VKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  +   M+ NG   D+ +Y++LI  Y        A  +   M   G +P+  T+ +L
Sbjct: 654 QDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSL 713

Query: 435 FLGLFEIH------------------QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
              L E+                   + +  ++L ++M  + V  +  +Y   + G+C+ 
Sbjct: 714 IKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEI 773

Query: 477 GFVLEALELFRAIRDSK 493
           G +  A ++F  ++  +
Sbjct: 774 GNLRVAEKVFDHMQQKE 790



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 181/366 (49%), Gaps = 17/366 (4%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +Y+++ L+      G V   F +   +++SC   ++V  T  +  LC +    E+  L  
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVADTLFVLDLCRKMNKDESFELKY 179

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           K  +  C      YNTL+N L R G       ++ EM         VC PN  TYN +++
Sbjct: 180 K-LIIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK-----VC-PNIYTYNKMVN 226

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G CK G V++A +    + +  ++PD  TYTS+I G+C   D + A ++F EM  +G + 
Sbjct: 227 GYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRR 286

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           + V ++ ++  LC   ++D+A  L   M      P   TY  LI   C +++   A  L 
Sbjct: 287 NEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLV 346

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             ME  G   ++ +Y  LI+  C    +E+A  L  +ML KG+ P V+TYN L  G  + 
Sbjct: 347 KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             +E AL + + M   ++  +T TYN  I G CK   V +A+ +   + + K   ++V+Y
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTY 465

Query: 502 NCLIDG 507
           N LIDG
Sbjct: 466 NSLIDG 471



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 50/129 (38%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD+M +     P    FN L  C  K + ++    +   +   G  P + +  ILI   
Sbjct: 782 VFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRL 841

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G    G  V   +L+  +  + + +  +I G+  +  +     LF       C    
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSS 901

Query: 213 FTYNTLING 221
            TY+ LI G
Sbjct: 902 QTYSLLIEG 910


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 211/425 (49%), Gaps = 10/425 (2%)

Query: 86  TPNEALCIFDYM--LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           +P  +L +F  +  LR+HP+     +FN+L             LS    +   GL PD+ 
Sbjct: 190 SPQASLDVFRSLIALRLHPNH---YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVV 246

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T++ L+   C+ G +     +L R+ +    P   T+ +L+        I +A  +    
Sbjct: 247 TYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAM 306

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
             F  EPD++TYN L  GLC+ G    A  L +EM     E   +  P+ VTYNT++D  
Sbjct: 307 TAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM-----EHLSIVSPDVVTYNTLVDAC 361

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K      A  L  +M+D+ +   +VT+  V++G C      EA      M ++G+ PDV
Sbjct: 362 FKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDV 421

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           +T++ ++D  CK   + KA  L++ M+  G+  +T+T NTL+   C   + + A +L  S
Sbjct: 422 ITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS 481

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
               G + D VSY T++  Y K    E AL L+ EM  + + P++ TYNTL  GL  I +
Sbjct: 482 PPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGK 541

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A+   +E+ +  +  D  TYN  I   CK G + +A +    + ++ ++ ++V+ N 
Sbjct: 542 LTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNT 601

Query: 504 LIDGL 508
           L++GL
Sbjct: 602 LMNGL 606



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 207/457 (45%), Gaps = 42/457 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M  +    P V ++N L     K +     L+L + +   G+   + TH+I
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++   C+ G++      L  +      P+ +T+ +LI   C    + +A  L  +     
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D FT NTL+  LC+      A    EE+     + G V  P+ V+Y T++    KE 
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEA----EELLRSPPQRGFV--PDEVSYGTVMAAYFKEN 505

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A  L+ +M    + P + TY ++I+G C      EA     E+M +G+ PD  T++
Sbjct: 506 KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYN 565

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+   CK G ++KA +    M+     P+  T NTL++G CL  K++ A KLF S    
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE------- 440
           G   DV++YNTLI   CK+ DV+ AL  +++M ++G++P   TYN +   L E       
Sbjct: 626 GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685

Query: 441 ---IHQVERALKLFD--------------------------EMRRNHVAADTYTYNNFID 471
              +H+++ + KL +                          E   N    D  +YN  + 
Sbjct: 686 QNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVK 745

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LC  G + EA  +   +      ++  +Y  L++GL
Sbjct: 746 ELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 184/389 (47%), Gaps = 7/389 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHGFV 163
           P + ++N+L   L +    D    L   +    +  PD+ T++ L++   K  R S    
Sbjct: 313 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALN 372

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +       + VT   ++KGLC E ++ EA             PDV TYNTLI+  C
Sbjct: 373 LLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC 432

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +  +   A  L +EM           K +T T NT++  LCKE   ++A+EL        
Sbjct: 433 KARNVAKAFVLMDEMVRSG------LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRG 486

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD V+Y +V+  +   N    A  L+ EM  + + P + T++ ++  LC  GK+ +A 
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L  ++ +G+ P+  TYN +I  YC    ++ A +    M  N    DVV+ NTL+N  
Sbjct: 547 DKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGL 606

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C +  +E+A+ L+     KG K  V+TYNTL   L +   V+ AL  F +M    +  D 
Sbjct: 607 CLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +TYN  +  L ++G   EA  +   + +S
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDES 695



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 181/403 (44%), Gaps = 42/403 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+   L +    +  L   K +   GL PD+ T++ LI+ +CK   V+  FV++  +
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +RS    +  T  +L+  LC E R  EA  L          PD  +Y T++    +    
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L++EM+           P+  TYNT+I GLC  G + +A +   ++  + + PD 
Sbjct: 508 EPALYLWDEMSKRK------LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY  +I  +C   D  +A +   +M++   +PDVVT + +M+ LC +GK++KA +L E 
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
              +G   +  TYNTLI   C    +D A   F  ME+ G   D  +YN +++   +   
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681

Query: 409 VEEALSLY---------------------SEMLSKGIKPTVVT---------------YN 432
            EEA ++                      +E +  G  P V +               YN
Sbjct: 682 SEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYN 741

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
                L    Q++ A  + DEM +  ++ D+ TY   ++GL K
Sbjct: 742 KSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 218/432 (50%), Gaps = 13/432 (3%)

Query: 79  QGDINLITPNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           Q  + L    + L +F+ M   R++PS   V  +N+L   L K K  +    LF  + + 
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPS---VFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
            L P + T++ LI+ +CK G     F V  R+      P+ +TF +L+KGL     + +A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +  + +     PD FT++ L +G         AL ++E   +         K N  T 
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG------VKMNAYTC 357

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + +++ LCKEG ++KA+E+  +   + + P+ V Y ++I G+C   D   A R+ IE M+
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAME 416

Query: 317 -QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            QG++PD + ++ ++   C+ G+M+ A + +  M  +GV+P+  TYN LI GY    + D
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
               +   ME NG M +VVSY TLIN  CK   + EA  +  +M  +G+ P V  YN L 
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G     ++E A +   EM +  +  +  TYN  IDGL  +G + EA +L   I     +
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596

Query: 496 LNIVSYNCLIDG 507
            ++ +YN LI G
Sbjct: 597 PDVFTYNSLISG 608



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F + LR     P   S  +L   L K K +   +++F  +  +   P  + +  
Sbjct: 126 SEAADLF-FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I    K+  V  G  +  R+      P+   +  LI GLC   R+ +A  LF +     
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + TYNTLI+G C+ G+   +  + E M   + E      P+ +T+NT++ GL K G
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE------PSLITFNTLLKGLFKAG 298

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A+ +  +MKD    PD  T++ +  G+        A  ++   +D GV+ +  T S
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LCK GK++KA  +L   + +G+ PN   YNT+IDGYC    +  AR    +ME  
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN LI  +C+  ++E A    ++M  KG+ P+V TYN L  G    ++ ++ 
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +  EM  N    +  +Y   I+ LCK   +LEA  + R + D      +  YN LIDG
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 189/394 (47%), Gaps = 7/394 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P ++  + + M   H  P  ++ FN L   L K    +   ++ K +   G  PD +T S
Sbjct: 265 PEKSFKVRERMKADHIEPSLIT-FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           IL + +    +      V    + S    NA T + L+  LC E +I +A  +  +    
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+   YNT+I+G CR G  + A    E M           KP+ + YN +I   C+ 
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG------MKPDHLAYNCLIRRFCEL 437

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++ A++   KMK + ++P V TY  +I G+    ++++   +  EM D G  P+VV++
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             +++ LCK  K+ +A  +   M  RGV+P    YN LIDG C   KI+ A +    M  
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   ++V+YNTLI+       + EA  L  E+  KG+KP V TYN+L  G      V+R
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            + L++EM+R+ +     TY+  I    K G  L
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 211/470 (44%), Gaps = 72/470 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F+ILF   + N+  +  L +++    +G+  + YT SIL+N  CK G++     +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRI---------MEAAALFTKHRVFAC------- 208
           LGR +     PN V + ++I G C +  +         ME   +   H  + C       
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 209 -------------------EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                               P V TYN LI G  R        ++ +EM + NG      
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED-NGTM---- 491

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN V+Y T+I+ LCK   + +A+ +   M+D  ++P V  Y  +I G C      +A R
Sbjct: 492 -PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
              EM+ +G++ ++VT++ ++D L   GK+ +A  LL  +  +G+ P+ +TYN+LI GY 
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610

Query: 370 LTDKIDHARKLFVSMESNG--------------CMH-----------------DVVSYNT 398
               +     L+  M+ +G              C                   D++ YN 
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNG 670

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++ Y  + D+E+A +L  +M+ K I     TYN+L LG  ++ ++     L DEM    
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +  TYN  + G C+    + A   +R +++  + L++   N L+ GL
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 10/357 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +++    P V ++NIL G   +   +D    + K +   G  P++ ++  LINC CK  +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +    +V   +     +P    +  LI G C++ +I +A     +      E ++ TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+GL  TG    A +L  E++          KP+  TYN++I G    G V +   L+ 
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYE 623

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +MK   I P + TY  +I   C        +RLF EM    ++PD++ ++ ++     +G
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
            M+KA  L + MI + +  +  TYN+LI G     K+   R L   M +     +  +YN
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            ++  +C+ KD   A   Y EM  KG    V   N L  GL E  + + A  +  EM
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 213/418 (50%), Gaps = 6/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +   M       P   S+N++   L K       + LF  +    + P+  T++ 
Sbjct: 169 DEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNT 228

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+   K G +  GF +  ++LR    PN +T+  L+ GLC   R+ E AA+  +     
Sbjct: 229 MIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD FTY+ L +G  RTG +   L+LFEE      + G        T + +++GLCK+G
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG------AYTCSILLNGLCKDG 342

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + KA+E+   + +  +    V Y ++I G+C   D   A  +F +M  + ++PD +T++
Sbjct: 343 KISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYN 402

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ L K  ++ +A  L+  M   GVNP+  T+NTLID Y    +++    +   M+  
Sbjct: 403 ALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEK 462

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VVSY +++N +CKN  + EA+++  +M  K + P    YN +     E    ++A
Sbjct: 463 GLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQA 522

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L ++M+ + V     TYN  I GLCK   + EA EL  ++R+     +++SYN LI
Sbjct: 523 FMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 182/373 (48%), Gaps = 6/373 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ILF   ++     T+LSLF+     G+    YT SIL+N  CK G++S    V
Sbjct: 291 PDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV 350

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ S      V + +LI G C    +  A ++F + +     PD  TYN LINGL +
Sbjct: 351 LQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L  EM   NG       P+  T+NT+ID   + G ++K   +   M+++ +
Sbjct: 411 VERITEAHDLVIEMEK-NG-----VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGL 464

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y S++  FC      EA  +  +M  + V P    ++ I+D   + G  D+A  
Sbjct: 465 KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M   GV P+  TYN LI G C   +I  A +L  S+ + G   DV+SYNTLI+  C
Sbjct: 525 LAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACC 584

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              + + AL L  EM   GIKP+  TY  LF  L    +V     L+ +M    V   + 
Sbjct: 585 YRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSG 644

Query: 465 TYNNFIDGLCKSG 477
            YN  +D   K G
Sbjct: 645 IYNIMVDAYAKCG 657



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 173/336 (51%), Gaps = 13/336 (3%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE----PDVFTYNTLINGLCRTGHTIV 230
           P+  T+   ++       + EA  +    R   C+    P+ F+YN +I GL + G    
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGML---RRMGCDGAPAPNAFSYNVVIAGLWKAGTDCD 206

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A+ LF+EM     E  VV  PN +TYNT+IDG  K+G ++    L+ +M    + P+V+T
Sbjct: 207 AVKLFDEMP----EKAVV--PNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVIT 260

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  ++ G C A    E   +  EM  + + PD  T+S++ D   + G       L E  +
Sbjct: 261 YNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESV 320

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            +GV    YT + L++G C   KI  A ++  ++ ++G +   V YNTLIN YC+  D+E
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            A S++ +M S+ I+P  +TYN L  GL ++ ++  A  L  EM +N V     T+N  I
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           D   ++G + +   +   +++   + N+VSY  +++
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVN 476



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 16/392 (4%)

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAV 178
            +H D V   F+ L +A   PD +T +  +      G +     +L R+       PNA 
Sbjct: 131 GRHAD-VRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAF 189

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           ++  +I GL       +A  LF +    A  P+  TYNT+I+G  + G       L+ +M
Sbjct: 190 SYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQM 249

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KPN +TYN ++ GLC+ G + +   +  +M    + PD  TY+ +  G 
Sbjct: 250 LRHG------LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
               D      LF E + +GV+    T S++++ LCK+GK+ KA  +L+ ++  G+   T
Sbjct: 304 SRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTT 363

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             YNTLI+GYC    ++ A  +F  M+S     D ++YN LIN   K + + EA  L  E
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIE 423

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M   G+ P+V T+NTL        Q+E+   +  +M+   +  +  +Y + ++  CK+G 
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483

Query: 479 VLEALELFRAIRDSKYELNIVS----YNCLID 506
           +LEA+    AI D  +  +++     YN +ID
Sbjct: 484 ILEAV----AILDDMFIKDVLPGAQVYNAIID 511



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 6/259 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L     +    +    +   +   GL P++ ++  ++N FCK G++     +
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P A  + ++I          +A  L  K +     P + TYN LI GLC+
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L + + N    +G+   P+ ++YNT+I   C     D+A EL  +M    I
Sbjct: 551 QSQISEAEELLDSLRN----YGLA--PDVISYNTLISACCYRSNTDRALELEKEMWKCGI 604

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TY  +      A   +E + L+ +M+D+ V P    +++++D   K G+  K   
Sbjct: 605 KPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEA 664

Query: 345 LLELMIWRGVNPNTYTYNT 363
           L + M  +G+    YT  T
Sbjct: 665 LRKEMSDKGIAVGDYTSMT 683


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 226/456 (49%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL +   M  M  SP  V+ +N+L   L+ +   +    L + +   GL   +YT+  
Sbjct: 219 QEALQLLFQMQAMGCSPNDVT-YNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDP 277

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +C+ G++     +   +L     P  VT+ +++ GLC   R+ +A  L        
Sbjct: 278 LIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 337

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ +YNTLI G  R G+   A  LF E+   +        P+ VTYNT+IDGLC+ G
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS------LAPSVVTYNTLIDGLCRLG 391

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD----- 322
            +D A  L  +M     +PDV T+T+ +RGFC   +   AK LF EM+++G+QPD     
Sbjct: 392 DLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYI 451

Query: 323 ------------------------------VVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                                         ++T++V +D L K G + +AS L++ M++ 
Sbjct: 452 TRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN 511

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+  TY ++I  + +   +  AR LF+ M S G    VV+Y  LI+ Y     ++ A
Sbjct: 512 GLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLA 571

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           +  + EM  KG+ P V+TYN L  GL ++ ++++A   F EM+   ++ + YTY   I+ 
Sbjct: 572 ILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINE 631

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            C  G   EAL L++ + D + + +  ++  L+  L
Sbjct: 632 NCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 199/387 (51%), Gaps = 6/387 (1%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           ++ + D    ++  +   G+ P + T++ +++ FCK G V     +L ++     +PN V
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+  L+ GL     + +A  L         E  V+TY+ LI G C  G    A  L EEM
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            +     G V  P  VTYNTI+ GLCK G V  A++L   M ++N+ PD+V+Y ++I G+
Sbjct: 299 LSR----GAV--PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 352

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
               +  EA  LF E+  + + P VVT++ ++D LC+ G +D A RL + MI  G +P+ 
Sbjct: 353 TRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDV 412

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           +T+ T + G+C    +  A++LF  M + G   D  +Y T I    K  D  +A  +  E
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           ML++G  P ++TYN    GL ++  ++ A +L  +M  N +  D  TY + I     +G 
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLI 505
           + +A  LF  +       ++V+Y  LI
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLI 559



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V TYNT+++  C+ G    AL L  +M        + C PN VTYN +++GL   G +
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQ------AMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++AKEL   M    +   V TY  +IRG+C      EA RL  EM+ +G  P VVT++ I
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           M  LCK G++  A +LL++M+ + + P+  +YNTLI GY     I  A  LF  +     
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              VV+YNTLI+  C+  D++ A+ L  EM+  G  P V T+ T   G  ++  +  A +
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LFDEM    +  D + Y   I G  K G   +A  +   +    +  ++++YN  IDGL
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 157/294 (53%), Gaps = 5/294 (1%)

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL----CKEGFVDKAKEL 275
           NGL R+ + ++   +  +M NG  +     + +  +   I+D L     K+  ++K   +
Sbjct: 94  NGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLV 153

Query: 276 FLKMKDENINPDVVTYTSVIRGFC-YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           F KM  + + PDV     V+R      N+ + A+ ++  M++ G+ P VVT++ ++D  C
Sbjct: 154 FYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFC 213

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G + +A +LL  M   G +PN  TYN L++G   + +++ A++L   M   G    V 
Sbjct: 214 KKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVY 273

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y+ LI  YC+   +EEA  L  EMLS+G  PTVVTYNT+  GL +  +V  A KL D M
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              ++  D  +YN  I G  + G + EA  LF  +R      ++V+YN LIDGL
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 161/360 (44%), Gaps = 45/360 (12%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F   LR     P V ++N L   L +    D  + L   +   G  PD++T +  
Sbjct: 360 EAFLLFAE-LRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  FCKMG +     +   +L     P+   + + I G        +A  +  +      
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD+ TYN  I+GL + G+   A  L ++M       G+V  P+ VTY +II      G 
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYN----GLV--PDHVTYTSIIHAHLMAGH 532

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + KA+ LFL+M  + I P VVTYT +I  +        A   F EM ++GV P+V+T++ 
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +++ LCK  KMD+A      M  +G++PN YTY  LI+  C                   
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC------------------- 633

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL---FEIHQVE 445
                     L +W       +EAL LY +ML + I+P   T+ +L   L   +++H V 
Sbjct: 634 ---------NLGHW-------QEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVR 677



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 55/244 (22%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKA------------------------------SRLLE 347
           G +   +++SVI+D L +NG M  A                                +L+
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135

Query: 348 LMIW--------------------RGVNPNTYTYNTLIDGYCLTDK---IDHARKLFVSM 384
           L++W                    +G+ P+    N ++    L D+   ID AR+++  M
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLR--LLRDRDNNIDVAREVYNVM 193

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G    VV+YNT+++ +CK   V+EAL L  +M + G  P  VTYN L  GL    ++
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A +L  +M R  +    YTY+  I G C+ G + EA  L   +        +V+YN +
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 505 IDGL 508
           + GL
Sbjct: 314 MYGL 317



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 58/137 (42%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ +L    A        +  F  ++  G+ P++ T++ LIN  CK+ ++   +  
Sbjct: 550 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNF 609

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     +PN  T+T LI   C      EA  L+        +PD  T+ +L+  L +
Sbjct: 610 FAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669

Query: 225 TGHTIVALNLFEEMANG 241
                V  +L   +A G
Sbjct: 670 DYKLHVVRHLENVIAAG 686


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 199/418 (47%), Gaps = 25/418 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VSSF     CL     Y+   S+ + +   G  PD  T+S ++N  C   ++   F++  
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R     +  T+T ++   C    I +A   F + R   C P+V TY  LI+   +  
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM------- 279
               A  LFE M +        C PN VTY+ +IDG CK G V+KA ++F +M       
Sbjct: 568 KVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621

Query: 280 ---------KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                     D +  P+VVTY +++ GFC ++   EA++L   M  +G +P+ + +  ++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK GK+D+A  +   M   G     YTY++LID Y    + D A K+   M  N C 
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +VV Y  +I+  CK    +EA  L   M  KG +P VVTY  +  G   I ++E  L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + M    VA +  TY   ID  CK+G +  A  L   ++ + +  +   Y  +I+G 
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 190/414 (45%), Gaps = 12/414 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ +   L      +    LF+ +   GL  D+YT++I+++ FCK G +      
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     TPN VT+T+LI       ++  A  LF       C P++ TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC----------KPNTVTYNTIIDGLCKEGFVDKAKE 274
            G    A  +FE M        V            +PN VTY  ++DG CK   V++A++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M  E   P+ + Y ++I G C     +EA+ +  EM + G    + T+S ++D   
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K  + D AS++L  M+     PN   Y  +IDG C   K D A KL   ME  GC  +VV
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  +I+ +     +E  L L   M SKG+ P  VTY  L     +   ++ A  L +EM
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ H    T  Y   I+G  K    +E+L L   I        +  Y  LID L
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 200/461 (43%), Gaps = 66/461 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++N L     K    D+   + + ++ A L  D +T        CK+G+      +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
              +    F P+ V +T LI GLC  S   EA     + R  +C P+V TY         
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+L++  C +G    A  L ++M           
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------ 403

Query: 250 KPNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
            P  V YN +I  +C +        +D A++ + +M    +  + +  +S  R  C A  
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + +A  +  EM+ QG  PD  T+S +++ LC   KM+ A  L E M   G+  + YTY  
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           ++D +C    I+ ARK F  M   GC  +VV+Y  LI+ Y K K V  A  L+  MLS+G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTY--------------TYN 467
             P +VTY+ L  G  +  QVE+A ++F+ M   ++    D Y              TY 
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DG CKS  V EA +L  A+     E N + Y+ LIDGL
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 196/450 (43%), Gaps = 51/450 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K K       LF+ + S G  P+I T+S LI+  CK G+V     +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610

Query: 165 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
             R+  S                   PN VT+ +L+ G C   R+ EA  L     +  C
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFGV-------- 247
           EP+   Y+ LI+GLC+ G    A  +  EM+               +  F V        
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 248 --------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                    C PN V Y  +IDGLCK G  D+A +L   M+++   P+VVTYT++I GF 
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                     L   M  +GV P+ VT+ V++D  CKNG +D A  LLE M       +T 
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            Y  +I+G+    +   +  L   +  +     +  Y  LI+   K + +E AL L  E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 420 --LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
              S  +     TYN+L   L   ++VE A +LF EM +  V  +  ++ + I GL ++ 
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            + EAL L   I  S  E+  +      DG
Sbjct: 969 KISEALLLLDFI--SHMEIQWIEEKKTSDG 996



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 34/433 (7%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKH----YDTVLSLFKRLNSAGLFPDIYTHSI----- 147
           +LR+   P  V SF +  G     KH    Y+ ++ L  R +   + P+ +   I     
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV-PEEFLQQIRDDDK 196

Query: 148 ---------LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
                    L+   C+ G  S     LGR+    F P+  T+  LI+      R+  A+ 
Sbjct: 197 EVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASL 256

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +  +  +     D FT       LC+ G    AL L E       E  V   P+TV Y  
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTK 307

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I GLC+    ++A +   +M+  +  P+VVTY++++ G          KR+   MM +G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT------D 372
             P    F+ ++   C +G    A +LL+ M+  G  P    YN LI   C        D
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D A K +  M + G + + ++ ++     C     E+A S+  EM+ +G  P   TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +   L    ++E A  LF+EM+R  + AD YTY   +D  CK+G + +A + F  +R+ 
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 493 KYELNIVSYNCLI 505
               N+V+Y  LI
Sbjct: 548 GCTPNVVTYTALI 560



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 152/330 (46%), Gaps = 11/330 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + D M  M    P    ++ L   L K    D    +   ++  G    +YT+S 
Sbjct: 656 EEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ + K+ R      VL ++L +   PN V +T +I GLC   +  EA  L        
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+V TY  +I+G    G     L L E M    G  GV   PN VTY  +ID  CK G
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNG 828

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  L  +MK  +       Y  VI GF    ++ E+  L  E+      P +  + 
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYR 886

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTY--TYNTLIDGYCLTDKIDHARKLFVSME 385
           +++D L K  +++ A RLLE +         Y  TYN+LI+  CL +K++ A +LF  M 
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             G + ++ S+ +LI    +N  + EAL L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 108/296 (36%), Gaps = 46/296 (15%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            YN L++ + R     V     +++ + + E FG          N ++   C+ G    A
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRKHCRNGSFSIA 219

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E   ++KD    P   TY  +I+ F  A+  + A  +  EM    ++ D  T       
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK GK            WR                          +    +E+   + D
Sbjct: 280 LCKVGK------------WR--------------------------EALTLVETENFVPD 301

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V Y  LI+  C+    EEA+   + M +    P VVTY+TL  G     Q+ R  ++ +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M           +N+ +   C SG    A +L + +    +    V YN LI  +
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 214/425 (50%), Gaps = 19/425 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++R     P + +FN++   L + + +   L+++ ++    L PD+ T+ ILI+  CK  
Sbjct: 153 LMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC 212

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +     V+   +      PN + ++ ++ GLC   +I +A  LF+K R   C  D+ TYN
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L+NG C++G+   A  L + +       GV      + Y  +I+GL +    ++A   +
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGV------IGYGCLINGLFRARRYEEAHMWY 326

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            KM  ENI PDV+ YT +IRG        EA  L  EM ++G++PD + ++ ++   C  
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +D+A  L   +      PN +TY+ LI G C    I+ A+ +F  ME  GC+  VV++
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446

Query: 397 NTLINWYCKNKDVEEALSLYSEM-----------LSKGIKPT--VVTYNTLFLGLFEIHQ 443
           N+LIN  CK   +EEA  L+ +M           LS+G      + +   +   L E   
Sbjct: 447 NSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGM 506

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           + +A KL  ++  + V  D  TYN  I+G CK G +  A +LF+ ++   +  + V+Y  
Sbjct: 507 ILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGT 566

Query: 504 LIDGL 508
           LIDGL
Sbjct: 567 LIDGL 571



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 227/500 (45%), Gaps = 91/500 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +AL +FD M      P  +    +L G     K +D    LF ++ ++G   D+ T+++
Sbjct: 215 QDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQ-RLFSKMRASGCNRDLITYNV 273

Query: 148 LINCFCKMGRVSHGFVVLG-----------------------------------RILRSC 172
           L+N FCK G +   F +L                                    ++LR  
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+ + +T +I+GL  E R+ EA  L  +       PD   YN LI G C  G+   A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L  E++  +      C PN  TY+ +I G+CK G ++KA+ +F +M+     P VVT+ 
Sbjct: 394 SLRLEISKHD------CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447

Query: 293 SVIRGFCYANDWNEAKRLFIEM-----------MDQGVQP--DVVTFSVIMDELCKNGKM 339
           S+I G C AN   EA+ LF +M           + QG     D+ +  V+M+ LC++G +
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            KA +LL  ++  GV P+  TYN LI+G+C    I+ A KLF  M+  G M D V+Y TL
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTL 567

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL-----------------------FL 436
           I+   +    E+AL ++ +M+ KG  P   TY T+                       F 
Sbjct: 568 IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFR 627

Query: 437 GL-----------FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           G            F+  +++ A++   EM       D   Y  F+ GL ++    EA  +
Sbjct: 628 GWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAI 687

Query: 486 FRAIRDSKYELNIVSYNCLI 505
           F  ++D  +++NI S +C++
Sbjct: 688 FSVLKD--FKMNISSASCVM 705



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 174/345 (50%), Gaps = 6/345 (1%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL  +  S    ++  F+ LI+         +A   F+  R F C+PD+F +N +++ L 
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLV 174

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R    ++AL ++ +M   N        P+ VTY  +I GLCK      A  LF +M D  
Sbjct: 175 RKEAFLLALAVYNQMLKCN------LNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRG 228

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+ + Y+ V+ G C A    +A+RLF +M   G   D++T++V+++  CK+G +D A 
Sbjct: 229 ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAF 288

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+L+   G       Y  LI+G     + + A   +  M       DV+ Y  +I   
Sbjct: 289 TLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGL 348

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            +   V EAL+L  EM  +G++P  + YN L  G  ++  ++ A  L  E+ ++    + 
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +TY+  I G+CK+G + +A  +F+ +       ++V++N LI+GL
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 35/286 (12%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + II  L KE   +   ++  ++K+  I      ++ +I  +  A    +A   F  M D
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC------- 369
              +PD+  F++I+  L +      A  +   M+   +NP+  TY  LI G C       
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 370 -------LTD---------------------KIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                  +TD                     KI  A++LF  M ++GC  D+++YN L+N
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +CK+  +++A +L   +   G    V+ Y  L  GLF   + E A   + +M R ++  
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D   Y   I GL + G V EAL L   + +     + + YN LI G
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 221/479 (46%), Gaps = 82/479 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
           P V +F  L     K    D    LFK +   G+ PD+  +S LI+ + K G +  G   
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 163 ---------------------------------VVLGRILRSCFTPNAVTFTSLIKGLCA 189
                                            VV  R+L    +PN VT+T LIKGLC 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           + RI EA  ++ +      EP + TY++LI+G C+ G+      L+E+M        +  
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK------MGY 457

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ V Y  ++DGL K+G +  A    +KM  ++I  +VV + S+I G+C  N ++EA +
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 310 LFIEMMDQGVQPDVVTFSVIM------DELCKNGK------------------------- 338
           +F  M   G++PDV TF+ +M      D  CK+ K                         
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577

Query: 339 ----------MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
                     ++ AS+    +I   + P+  TYNT+I GYC   ++D A ++F  ++   
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V+   LI+  CKN D++ A+ ++S M  KG KP  VTY  L     +   +E + 
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           KLF+EM+   ++    +Y+  IDGLCK G V EA  +F    D+K   ++V+Y  LI G
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 195/410 (47%), Gaps = 47/410 (11%)

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
            K+    T   ++KR+   G+ P++ T++ILI   C+ GR+   F + G+IL+    P+ 
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           VT++SLI G C    +    AL+         PDV  Y  L++GL + G  + A+    +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR- 296
           M       G   + N V +N++IDG C+    D+A ++F  M    I PDV T+T+V+R 
Sbjct: 487 M------LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540

Query: 297 -----GFCY-----------------------------------ANDWNEAKRLFIEMMD 316
                 FC                                     +   +A + F  +++
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
             ++PD+VT++ ++   C   ++D+A R+ EL+      PNT T   LI   C  + +D 
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A ++F  M   G   + V+Y  L++W+ K+ D+E +  L+ EM  KGI P++V+Y+ +  
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           GL +  +V+ A  +F +     +  D   Y   I G CK G ++EA  L+
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 770



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 235/499 (47%), Gaps = 70/499 (14%)

Query: 59  TVKDR---ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG 115
           +++DR   A + KFL E C   G  D       +AL IF Y  ++    P  S + +L  
Sbjct: 138 SIRDRSLDADVCKFLMECCCRYGMVD-------KALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPD-IYTHSILINC-FCKMGRVSHGFVVLGRILRSCF 173
            +  ++  D +   F +L   G+ P  +  H  +++  FCK G V+        ++   F
Sbjct: 191 LIGSDR-VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGF 248

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
               V+   ++KGL  + +I  A+ L +        P+V T+ TLING C+ G    A +
Sbjct: 249 RVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           LF+ M     E      P+ + Y+T+IDG  K G +    +LF +   + +  DVV ++S
Sbjct: 308 LFKVMEQRGIE------PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
            I  +  + D   A  ++  M+ QG+ P+VVT+++++  LC++G++ +A  +   ++ RG
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421

Query: 354 VNPNTYTYNTLIDGYC-----------------------------LTDKID------HAR 378
           + P+  TY++LIDG+C                             L D +       HA 
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +  V M       +VV +N+LI+ +C+    +EAL ++  M   GIKP V T+ T    +
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT----V 537

Query: 439 FEIHQVERA----------LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
             +  +E A          L+LFD M+RN ++AD    N  I  L K   + +A + F  
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597

Query: 489 IRDSKYELNIVSYNCLIDG 507
           + + K E +IV+YN +I G
Sbjct: 598 LIEGKMEPDIVTYNTMICG 616



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 47/399 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ IL   L ++        ++ ++   G+ P I T+S LI+ FCK G +  GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++  + P+ V +  L+ GL  +  ++ A     K    +   +V  +N+LI+G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII------DGLCKE-----GF----- 268
                 AL +F  M    G +G+  KP+  T+ T++      D  CK      G      
Sbjct: 509 LNRFDEALKVFRLM----GIYGI--KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562

Query: 269 -------------------------VDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                                    ++ A + F  + +  + PD+VTY ++I G+C    
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            +EA+R+F  +      P+ VT ++++  LCKN  MD A R+  +M  +G  PN  TY  
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L+D +  +  I+ + KLF  M+  G    +VSY+ +I+  CK   V+EA +++ + +   
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           + P VV Y  L  G  ++ ++  A  L++ M RN V  D
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 169/351 (48%), Gaps = 16/351 (4%)

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKHRVFACEPDVFTYNTL 218
           F VLG I       +   F  L++  C    + +A  +F   T+  V   +  V+    +
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR---M 187

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT-YNTIIDGLCKEGFVDKAKELFL 277
           +N L  +    +  + F+++  G  E      P+ V+ +  ++D L  +G V KA +   
Sbjct: 188 LNSLIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFHR 241

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            + +      +V+   V++G    +    A RL   ++D G  P+VVTF  +++  CK G
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           +MD+A  L ++M  RG+ P+   Y+TLIDGY     +    KLF      G   DVV ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           + I+ Y K+ D+  A  +Y  ML +GI P VVTY  L  GL +  ++  A  ++ ++ + 
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +     TY++ IDG CK G +     L+  +    Y  ++V Y  L+DGL
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 24/434 (5%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF--------KRLNSAGL 138
           PN AL  F +       P    SF  +   L +N  +D    +F        K  N  G 
Sbjct: 83  PNSALKYFRWAEISGKDP----SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGS 138

Query: 139 FPDIYTHS----ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
             D    +     L+ C C+ G V     +     +        +   ++  L    R+ 
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198

Query: 195 EAAALFTKHRVFACEPD-VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
             A  F K      EP  V  +  +++ L   G    AL+    +       G+V     
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV----- 253

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
            + N ++ GL  +  ++ A  L   + D    P+VVT+ ++I GFC   + + A  LF  
Sbjct: 254 -SCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G++PD++ +S ++D   K G +    +L    + +GV  +   +++ ID Y  +  
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A  ++  M   G   +VV+Y  LI   C++  + EA  +Y ++L +G++P++VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +   +     L+++M +     D   Y   +DGL K G +L A+     +    
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 494 YELNIVSYNCLIDG 507
             LN+V +N LIDG
Sbjct: 492 IRLNVVVFNSLIDG 505



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P   ++  L    +K+   +    LF+ +   G+ P I ++SI+I+  CK GRV    
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            +  + + +   P+ V +  LI+G C   R++EAA L+        +PD
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 221/421 (52%), Gaps = 10/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL I + M +M  +P  ++S+NIL   L K    +  L +   +  AGLFP+I T +I+
Sbjct: 395 EALRILEAM-KMDAAPN-LTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIM 452

Query: 149 INCFCKMGRVSHG-FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           I+  CK  R+     + LG   + C TP++VTF SLI GL    ++ +A  L+ K     
Sbjct: 453 IDRLCKAQRLDEACSIFLGLDHKVC-TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSG 511

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+   Y +LI    + G       +++EM +        C P+ +  N  +D + K G
Sbjct: 512 QTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG------CSPDLMLLNNYMDCVFKAG 565

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++K + LF ++K + + PDV +Y+ +I G        +  +LF EM +QG+  D   ++
Sbjct: 566 EIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYN 625

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK+GK++KA +LLE M  +G+ P   TY ++IDG    D++D A  LF   +S 
Sbjct: 626 IVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 685

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +VV Y++LI+ + K   ++EA  +  E++ KG+ P   T+N L   L +  +++ A
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L  F  M+      +  TY+  ++GLCK     +A   ++ ++    + N ++Y  +I G
Sbjct: 746 LVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISG 805

Query: 508 L 508
           L
Sbjct: 806 L 806



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 201/430 (46%), Gaps = 28/430 (6%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  F  L    A+    D  LSL   + S     D+  +++ I+CF K+G+V   +    
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ VTFTS+I  LC   R+ EA  LF +       P V+ YNT+I G    G
Sbjct: 297 ELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVG 356

Query: 227 HTIVALNLFEEMANGN---------------GEFGVV-------------CKPNTVTYNT 258
               A +L E                     G  G V               PN  +YN 
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNI 416

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +ID LCK G ++ A ++   MK+  + P+++T   +I   C A   +EA  +F+ +  + 
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD VTF  ++D L ++GK++ A  L E M+  G  PN   Y +LI  +    + +   
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           K++  M   GC  D++  N  ++   K  ++E+  +L+ E+ ++G+ P V +Y+ L  GL
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +    +   KLF EM+   +  DT  YN  IDG CKSG V +A +L   ++    +  +
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656

Query: 499 VSYNCLIDGL 508
           V+Y  +IDGL
Sbjct: 657 VTYGSVIDGL 666



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 195/420 (46%), Gaps = 8/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + + M R     P  S++  L G L+     D +L+L +++   G    ++  + L
Sbjct: 185 EAFGVIETM-RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTL 243

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  F + GRV     +L  +  + F  + V +   I       ++  A   F + +    
Sbjct: 244 ICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGL 303

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+ ++I  LC+      A+ LFEE+ +          P    YNT+I G    G 
Sbjct: 304 VPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKS------VPCVYAYNTMIMGYGSVGK 357

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            ++A  L  + K +   P V+ Y  ++          EA R+ +E M     P++ ++++
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRI-LEAMKMDAAPNLTSYNI 416

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LCK G+++ A ++ + M   G+ PN  T N +ID  C   ++D A  +F+ ++   
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D V++ +LI+   ++  V +A  LY +ML  G  P  V Y +L    F+  + E   
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K++ EM     + D    NN++D + K+G + +   LF  I+      ++ SY+ LI GL
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 172/398 (43%), Gaps = 48/398 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNIL---FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           N+A  +++ ML    +P  V   +++   F C  K   +     ++K +   G  PD+  
Sbjct: 498 NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH----KIYKEMMHRGCSPDLML 553

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +  ++C  K G +  G  +   I     TP+  +++ LI GL       +   LF + +
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                 D   YN +I+G C++G    A  L EEM           +P  VTY ++IDGL 
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG------LQPTVVTYGSVIDGLA 667

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV- 323
           K   +D+A  LF + K + ++ +VV Y+S+I GF      +EA  +  E+M +G+ P+  
Sbjct: 668 KIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTY 727

Query: 324 ----------------------------------VTFSVIMDELCKNGKMDKASRLLELM 349
                                             VT+S++++ LCK  K +KA    + M
Sbjct: 728 TWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEM 787

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ PNT TY T+I G      +  A+ LF   +S+G + D   YN +I         
Sbjct: 788 QKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKA 847

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            +A  L+ E   KG +    T   L   L +   +E+A
Sbjct: 848 MDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 6/239 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  +   LAK    D    LF+   S  +  ++  +S LI+ F K+GR+   +++
Sbjct: 654 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLI 713

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++   TPN  T+  L+  L     I EA   F   +   C P+  TY+ ++NGLC+
Sbjct: 714 LEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCK 773

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A   ++EM           KPNT+TY T+I GL + G V +AK+LF + K    
Sbjct: 774 VRKFNKAFVFWQEMQKQG------LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGG 827

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            PD   Y ++I G   AN   +A  LF E   +G +    T  V++D L K   +++A+
Sbjct: 828 IPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAA 886



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 7/295 (2%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            YN L+  + RT +      + EEM+     FG    P+  T   ++    K   + +A 
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAG--FG----PSNNTCIEMVASFVKSRKLREAF 187

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +   M+     P    YT++I     A++ +    L  +M + G +  V  F+ ++   
Sbjct: 188 GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVF 247

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            + G++D A  LL+ M     N +   YN  ID +    K+D A K F  ++S G + D 
Sbjct: 248 AREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDD 307

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V++ ++I   CK + V+EA+ L+ E+ S    P V  YNT+ +G   + +   A  L + 
Sbjct: 308 VTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER 367

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +R         YN  +  L + G V EAL +  A++      N+ SYN LID L
Sbjct: 368 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAP-NLTSYNILIDML 421


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 214/425 (50%), Gaps = 19/425 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++R     P + +FN++   L + + +   L+++ ++    L PD+ T+ ILI+  CK  
Sbjct: 153 LMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC 212

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +     V+   +      PN + ++ ++ GLC   +I +A  LF+K R   C  D+ TYN
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L+NG C++G+   A  L + +       GV      + Y  +I+GL +    ++A   +
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGV------IGYGCLINGLFRARRYEEAHMWY 326

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            KM  ENI PDV+ YT +IRG        EA  L  EM ++G++PD + ++ ++   C  
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +D+A  L   +      PN +TY+ LI G C    I+ A+ +F  ME  GC+  VV++
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446

Query: 397 NTLINWYCKNKDVEEALSLYSEM-----------LSKGIKPT--VVTYNTLFLGLFEIHQ 443
           N+LIN  CK   +EEA  L+ +M           LS+G      + +   +   L E   
Sbjct: 447 NSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGM 506

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           + +A KL  ++  + V  D  TYN  I+G CK G +  A +LF+ ++   +  + V+Y  
Sbjct: 507 ILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGT 566

Query: 504 LIDGL 508
           LIDGL
Sbjct: 567 LIDGL 571



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 227/500 (45%), Gaps = 91/500 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +AL +FD M      P  +    +L G     K +D    LF ++ ++G   D+ T+++
Sbjct: 215 QDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQ-RLFSKMRASGCNRDLITYNV 273

Query: 148 LINCFCKMGRVSHGFVVLG-----------------------------------RILRSC 172
           L+N FCK G +   F +L                                    ++LR  
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+ + +T +I+GL  E R+ EA  L  +       PD   YN LI G C  G+   A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L  E++  +      C PN  TY+ +I G+CK G ++KA+ +F +M+     P VVT+ 
Sbjct: 394 SLRLEISKHD------CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFN 447

Query: 293 SVIRGFCYANDWNEAKRLFIEM-----------MDQGVQP--DVVTFSVIMDELCKNGKM 339
           S+I G C AN   EA+ LF +M           + QG     D+ +  V+M+ LC++G +
Sbjct: 448 SLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMI 507

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            KA +LL  ++  GV P+  TYN LI+G+C    I+ A KLF  M+  G M D V+Y TL
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTL 567

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL-----------------------FL 436
           I+   +    E+AL ++ +M+ KG  P   TY T+                       F 
Sbjct: 568 IDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFR 627

Query: 437 GL-----------FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           G            F+  +++ A++   EM       D   Y  F+ GL ++    EA  +
Sbjct: 628 GWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAI 687

Query: 486 FRAIRDSKYELNIVSYNCLI 505
           F  ++D  +++NI S +C++
Sbjct: 688 FSVLKD--FKMNISSASCVM 705



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 173/345 (50%), Gaps = 6/345 (1%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL  +  S    ++  F+ LI+         +A   F   R F C+PD+F +N +++ L 
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLV 174

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R    ++AL ++ +M   N        P+ VTY  +I GLCK      A  LF +M D  
Sbjct: 175 RKEAFLLALAVYNQMLKCN------LNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRG 228

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+ + Y+ V+ G C A    +A+RLF +M   G   D++T++V+++  CK+G +D A 
Sbjct: 229 ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAF 288

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL+L+   G       Y  LI+G     + + A   +  M       DV+ Y  +I   
Sbjct: 289 TLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGL 348

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            +   V EAL+L  EM  +G++P  + YN L  G  ++  ++ A  L  E+ ++    + 
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +TY+  I G+CK+G + +A  +F+ +       ++V++N LI+GL
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 35/286 (12%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + II  L KE   +   ++  ++K+  I      ++ +I  +  A    +A   F  M D
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC------- 369
              +PD+  F++I+  L +      A  +   M+   +NP+  TY  LI G C       
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 370 -------LTD---------------------KIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                  +TD                     KI  A++LF  M ++GC  D+++YN L+N
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +CK+  +++A +L   +   G    V+ Y  L  GLF   + E A   + +M R ++  
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D   Y   I GL + G V EAL L   + +     + + YN LI G
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 199/417 (47%), Gaps = 25/417 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VSSF     CL     Y+   S+ + +   G  PD  T+S ++N  C   ++   F++  
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R     +  T+T ++   C    I +A   F + R   C P+V TY  LI+   +  
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM------- 279
               A  LFE M +        C PN VTY+ +IDG CK G V+KA ++F +M       
Sbjct: 568 KVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621

Query: 280 ---------KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                     D +  P+VVTY +++ GFC ++   EA++L   M  +G +P+ + +  ++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK GK+D+A  +   M   G     YTY++LID Y    + D A K+   M  N C 
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +VV Y  +I+  CK    +EA  L   M  KG +P VVTY  +  G   I ++E  L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            + M    VA +  TY   ID  CK+G +  A  L   ++ + +  +   Y  +I+G
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 190/414 (45%), Gaps = 12/414 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ +   L      +    LF+ +   GL  D+YT++I+++ FCK G +      
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     TPN VT+T+LI       ++  A  LF       C P++ TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC----------KPNTVTYNTIIDGLCKEGFVDKAKE 274
            G    A  +FE M        V            +PN VTY  ++DG CK   V++A++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M  E   P+ + Y ++I G C     +EA+ +  EM + G    + T+S ++D   
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K  + D AS++L  M+     PN   Y  +IDG C   K D A KL   ME  GC  +VV
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  +I+ +     +E  L L   M SKG+ P  VTY  L     +   ++ A  L +EM
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ H    T  Y   I+G  K    +E+L L   I        +  Y  LID L
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 200/461 (43%), Gaps = 66/461 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++N L     K    D+   + + ++ A L  D +T        CK+G+      +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
              +    F P+ V +T LI GLC  S   EA     + R  +C P+V TY         
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+L++  C +G    A  L ++M           
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------ 403

Query: 250 KPNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
            P  V YN +I  +C +        +D A++ + +M    +  + +  +S  R  C A  
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + +A  +  EM+ QG  PD  T+S +++ LC   KM+ A  L E M   G+  + YTY  
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           ++D +C    I+ ARK F  M   GC  +VV+Y  LI+ Y K K V  A  L+  MLS+G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTY--------------TYN 467
             P +VTY+ L  G  +  QVE+A ++F+ M   ++    D Y              TY 
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DG CKS  V EA +L  A+     E N + Y+ LIDGL
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 190/432 (43%), Gaps = 49/432 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K K       LF+ + S G  P+I T+S LI+  CK G+V     +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610

Query: 165 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
             R+  S                   PN VT+ +L+ G C   R+ EA  L     +  C
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFGV-------- 247
           EP+   Y+ LI+GLC+ G    A  +  EM+               +  F V        
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 248 --------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                    C PN V Y  +IDGLCK G  D+A +L   M+++   P+VVTYT++I GF 
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                     L   M  +GV P+ VT+ V++D  CKNG +D A  LLE M       +T 
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            Y  +I+G+    +   +  L   +  +     +  Y  LI+   K + +E AL L  E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 420 --LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
              S  +     TYN+L   L   ++VE A +LF EM +  V  +  ++ + I GL ++ 
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 478 FVLEALELFRAI 489
            + EAL L   I
Sbjct: 969 KISEALLLLDFI 980



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 34/433 (7%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKH----YDTVLSLFKRLNSAGLFPDIYTHSI----- 147
           +LR+   P  V SF +  G     KH    Y+ ++ L  R +   + P+ +   I     
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV-PEEFLQQIRDDDK 196

Query: 148 ---------LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
                    L+   C+ G  S     LGR+    F P+  T+  LI+      R+  A+ 
Sbjct: 197 EVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASL 256

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +  +  +     D FT       LC+ G    AL L E       E  V   P+TV Y  
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTK 307

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I GLC+    ++A +   +M+  +  P+VVTY++++ G          KR+   MM +G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT------D 372
             P    F+ ++   C +G    A +LL+ M+  G  P    YN LI   C        D
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D A K +  M + G + + ++ ++     C     E+A S+  EM+ +G  P   TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +   L    ++E A  LF+EM+R  + AD YTY   +D  CK+G + +A + F  +R+ 
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 493 KYELNIVSYNCLI 505
               N+V+Y  LI
Sbjct: 548 GCTPNVVTYTALI 560



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 152/330 (46%), Gaps = 11/330 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + D M  M    P    ++ L   L K    D    +   ++  G    +YT+S 
Sbjct: 656 EEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ + K+ R      VL ++L +   PN V +T +I GLC   +  EA  L        
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+V TY  +I+G    G     L L E M    G  GV   PN VTY  +ID  CK G
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNG 828

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  L  +MK  +       Y  VI GF    ++ E+  L  E+      P +  + 
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYR 886

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTY--TYNTLIDGYCLTDKIDHARKLFVSME 385
           +++D L K  +++ A RLLE +         Y  TYN+LI+  CL +K++ A +LF  M 
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             G + ++ S+ +LI    +N  + EAL L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 108/296 (36%), Gaps = 46/296 (15%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            YN L++ + R     V     +++ + + E FG          N ++   C+ G    A
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRKHCRNGSFSIA 219

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E   ++KD    P   TY  +I+ F  A+  + A  +  EM    ++ D  T       
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK GK            WR                          +    +E+   + D
Sbjct: 280 LCKVGK------------WR--------------------------EALTLVETENFVPD 301

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V Y  LI+  C+    EEA+   + M +    P VVTY+TL  G     Q+ R  ++ +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M           +N+ +   C SG    A +L + +    +    V YN LI  +
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 231/484 (47%), Gaps = 66/484 (13%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M +     P + S N L   L KN    T   +++++   G+ PD++  SI++
Sbjct: 175 ALYVFDNMGKCG-RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 150 NCFCKMGRVS-------------------------HGFVVLGRILRS----------CFT 174
           N FCK G+V                          +G+V LG +  +            +
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 175 PNAVTFTSLIKGLCAESRIMEA-AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            N VT+T LIKG C + ++ EA   L       A  PD   Y  LI+G CRTG    A+ 
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 234 LFEEM---------------ANG---NGEF----GVVC-------KPNTVTYNTIIDGLC 264
           L +EM                NG    GE     GV+        KP++ +YNT++DG C
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +EG   +A  L  KM  E I P V+TY ++++G C    +++A +++  MM  GV PD V
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV 473

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            +S ++D L K    + AS L + ++ RG   +  T+NT+I G C   K+  A ++F  M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  GC  D ++Y TLI+ YCK  +V +A  +   M  + I P++  YN+L  GLF+  ++
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
                L  EM    +  +  TY   IDG CK G + +A   +  + ++    NI+  + +
Sbjct: 594 VEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 505 IDGL 508
           + GL
Sbjct: 654 VSGL 657



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 227/481 (47%), Gaps = 62/481 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D ML+     P V ++N L   L +   +D  L ++  +   G+ PD   +S 
Sbjct: 419 SEAFNLCDKMLQ-EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   KM        +   IL   FT + +TF ++I GLC   +++EA  +F K +   
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 208 CEPDVFTYNTLINGLCRTGHTIVA---------------LNLFEEMANGN---------- 242
           C PD  TY TLI+G C+  +   A               + ++  + +G           
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597

Query: 243 ---GEFGVV-CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
               E G+    PN VTY  +IDG CKEG +DKA   + +M +  ++ +++  ++++ G 
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDV--------------------------------VTF 326
                 +EA  L  +M+D G  PD                                 + +
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++ +  LCK GK+D A R   ++  +G  P+ +TY TLI GY     +D A +L   M  
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G + ++V+YN LIN  CK+++V+ A  L+ ++  KG+ P VVTYNTL  G  +I  ++ 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A KL D+M    ++    TY+  I+GLCK G +  +++L   +  +  +  ++ Y  L+ 
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 507 G 507
           G
Sbjct: 898 G 898



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 196/389 (50%), Gaps = 7/389 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNS-AGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           V ++ +L     K    D    + + +   A L PD   + +LI+ +C+ G++     +L
Sbjct: 296 VVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
             +LR     N     SLI G C    I EA  + T+   +  +PD ++YNTL++G CR 
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           GHT  A NL ++M     E      P  +TYNT++ GLC+ G  D A +++  M    + 
Sbjct: 416 GHTSEAFNLCDKMLQEGIE------PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVA 469

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PD V Y++++ G     ++  A  L+ +++ +G     +TF+ ++  LCK GKM +A  +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + M   G +P+  TY TLIDGYC    +  A K+  +ME       +  YN+LI+   K
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFK 589

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           ++ + E   L +EM  +G+ P +VTY  L  G  +   +++A   + EM  N ++A+   
Sbjct: 590 SRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            +  + GL + G + EA  L + + D  +
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKMVDHGF 678



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 61/478 (12%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD--- 141
           + P  +L  F ++ +     P V S+  L   L++ + YD   +   +L     F D   
Sbjct: 80  LNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGN 139

Query: 142 --------IYTH--------SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
                   +Y           +++  + + G   +   V   + +    P+  +  SL+ 
Sbjct: 140 VIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
            L        A  ++ +       PDVF  + ++N  C+ G    A    ++M N     
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----L 255

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           GV  +PN VTY+++I+G    G V+ AK +   M ++ ++ +VVTYT +I+G+C     +
Sbjct: 256 GV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 306 EAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           EA+++   M ++  + PD   + V++D  C+ GK+D A RLL+ M+  G+  N +  N+L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+GYC   +I  A  +   M       D  SYNTL++ YC+     EA +L  +ML +GI
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY-------------------- 464
           +PTV+TYNTL  GL  +   + AL+++  M +  VA D                      
Sbjct: 434 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAST 493

Query: 465 ---------------TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                          T+N  I GLCK G ++EA E+F  ++D     + ++Y  LIDG
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 61/393 (15%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN +   L K         +F ++   G  PD  T+  LI+ +CK   V   F V G +
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY------------- 215
            R   +P+   + SLI GL    R++E   L T+  +    P++ TY             
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 216 ----------------------NTLINGLCRTGHTIVALNLFEEMAN------------G 241
                                 +T+++GL R G    A  L ++M +             
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688

Query: 242 NGEFGVV----------CK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           +  +  +          CK    PN + YN  I GLCK G VD A+  F  +  +   PD
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             TY ++I G+  A + +EA RL  EM+ +G+ P++VT++ +++ LCK+  +D+A RL  
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +  +G+ PN  TYNTLIDGYC    +D A KL   M   G    VV+Y+ LIN  CK+ 
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           D+E ++ L ++M+  G+   ++ Y TL  G F+
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFK 901



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 47/382 (12%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  + +  +   CK+S  G        +A  +   M R   SP  +  +N L   L K++
Sbjct: 541 DGITYRTLIDGYCKASNVG--------QAFKVKGAMEREXISPS-IEMYNSLISGLFKSR 591

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
                  L   +   GL P+I T+  LI+ +CK G +   F     +  +  + N +  +
Sbjct: 592 RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651

Query: 182 SLIKGLCAESRIMEAAAL---------FTKHRVF-------------------ACE---- 209
           +++ GL    RI EA  L         F  H  F                   +C+    
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLL 711

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+   YN  I GLC+TG    A   F  ++      G V  P+  TY T+I G    G V
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK----GFV--PDNFTYCTLIHGYSAAGNV 765

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A  L  +M    + P++VTY ++I G C + + + A+RLF ++  +G+ P+VVT++ +
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK G MD A +L + MI  G++P+  TY+ LI+G C    I+ + KL   M   G 
Sbjct: 826 IDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885

Query: 390 MHDVVSYNTLINWYCKNKDVEE 411
              ++ Y TL+    K  +  E
Sbjct: 886 DSKLIEYCTLVQGGFKTSNYNE 907


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 199/418 (47%), Gaps = 25/418 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VSSF     CL     Y+   S+ + +   G  PD  T+S ++N  C   ++   F++  
Sbjct: 410 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 466

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R     +  T+T ++   C    I +A   F + R   C P+V TY  LI+   +  
Sbjct: 467 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 526

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM------- 279
               A  LFE M +        C PN VTY+ +IDG CK G V+KA ++F +M       
Sbjct: 527 KVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 580

Query: 280 ---------KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
                     D +  P+VVTY +++ GFC ++   EA++L   M  +G +P+ + +  ++
Sbjct: 581 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 640

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK GK+D+A  +   M   G     YTY++LID Y    + D A K+   M  N C 
Sbjct: 641 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 700

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +VV Y  +I+  CK    +EA  L   M  KG +P VVTY  +  G   I ++E  L+L
Sbjct: 701 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 760

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + M    VA +  TY   ID  CK+G +  A  L   ++ + +  +   Y  +I+G 
Sbjct: 761 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 818



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 190/414 (45%), Gaps = 12/414 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ +   L      +    LF+ +   GL  D+YT++I+++ FCK G +      
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 499

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     TPN VT+T+LI       ++  A  LF       C P++ TY+ LI+G C+
Sbjct: 500 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC----------KPNTVTYNTIIDGLCKEGFVDKAKE 274
            G    A  +FE M        V            +PN VTY  ++DG CK   V++A++
Sbjct: 560 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 619

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M  E   P+ + Y ++I G C     +EA+ +  EM + G    + T+S ++D   
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 679

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K  + D AS++L  M+     PN   Y  +IDG C   K D A KL   ME  GC  +VV
Sbjct: 680 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 739

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  +I+ +     +E  L L   M SKG+ P  VTY  L     +   ++ A  L +EM
Sbjct: 740 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ H    T  Y   I+G  K    +E+L L   I        +  Y  LID L
Sbjct: 800 KQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNL 851



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 202/463 (43%), Gaps = 70/463 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++N L     K    D+   + + ++ A L  D +T        CK+G+      +
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
              +    F P+ V +T LI GLC  S   EA     + R  +C P+V TY         
Sbjct: 252 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+L++  C +G    A  L ++M        V C
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM--------VKC 360

Query: 250 K--PNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
              P  V YN +I  +C +        +D A++ + +M    +  + +  +S  R  C A
Sbjct: 361 GHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 420

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             + +A  +  EM+ QG  PD  T+S +++ LC   KM+ A  L E M   G+  + YTY
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 480

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             ++D +C    I+ ARK F  M   GC  +VV+Y  LI+ Y K K V  A  L+  MLS
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTY--------------T 465
           +G  P +VTY+ L  G  +  QVE+A ++F+ M   ++    D Y              T
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 600

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y   +DG CKS  V EA +L  A+     E N + Y+ LIDGL
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 190/432 (43%), Gaps = 49/432 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K K       LF+ + S G  P+I T+S LI+  CK G+V     +
Sbjct: 510 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 569

Query: 165 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
             R+  S                   PN VT+ +L+ G C   R+ EA  L     +  C
Sbjct: 570 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 629

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFGV-------- 247
           EP+   Y+ LI+GLC+ G    A  +  EM+               +  F V        
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 689

Query: 248 --------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                    C PN V Y  +IDGLCK G  D+A +L   M+++   P+VVTYT++I GF 
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                     L   M  +GV P+ VT+ V++D  CKNG +D A  LLE M       +T 
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            Y  +I+G+    +   +  L   +  +     +  Y  LI+   K + +E AL L  E+
Sbjct: 810 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867

Query: 420 --LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
              S  +     TYN+L   L   ++VE A +LF EM +  V  +  ++ + I GL ++ 
Sbjct: 868 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 927

Query: 478 FVLEALELFRAI 489
            + EAL L   I
Sbjct: 928 KISEALLLLDFI 939



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 34/433 (7%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKH----YDTVLSLFKRLNSAGLFPDIYTHSI----- 147
           +LR+   P  V SF +  G     KH    Y+ ++ L  R +   + P+ +   I     
Sbjct: 97  VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV-PEEFLQQIRDDDK 155

Query: 148 ---------LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
                    L+   C+ G  S     LGR+    F P+  T+  LI+      R+  A+ 
Sbjct: 156 EVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASL 215

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +  +  +     D FT       LC+ G    AL L E       E  V   P+TV Y  
Sbjct: 216 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTK 266

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I GLC+    ++A +   +M+  +  P+VVTY++++ G          KR+   MM +G
Sbjct: 267 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 326

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT------D 372
             P    F+ ++   C +G    A +LL+ M+  G  P    YN LI   C        D
Sbjct: 327 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFD 386

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D A K +  M + G + + ++ ++     C     E+A S+  EM+ +G  P   TY+
Sbjct: 387 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 446

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +   L    ++E A  LF+EM+R  + AD YTY   +D  CK+G + +A + F  +R+ 
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 506

Query: 493 KYELNIVSYNCLI 505
               N+V+Y  LI
Sbjct: 507 GCTPNVVTYTALI 519



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 152/330 (46%), Gaps = 11/330 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + D M  M    P    ++ L   L K    D    +   ++  G    +YT+S 
Sbjct: 615 EEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 673

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ + K+ R      VL ++L +   PN V +T +I GLC   +  EA  L        
Sbjct: 674 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 733

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+V TY  +I+G    G     L L E M    G  GV   PN VTY  +ID  CK G
Sbjct: 734 CQPNVVTYTAMIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNG 787

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  L  +MK  +       Y  VI GF    ++ E+  L  E+      P +  + 
Sbjct: 788 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYR 845

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTY--TYNTLIDGYCLTDKIDHARKLFVSME 385
           +++D L K  +++ A RLLE +         Y  TYN+LI+  CL +K++ A +LF  M 
Sbjct: 846 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 905

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             G + ++ S+ +LI    +N  + EAL L
Sbjct: 906 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 935



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 108/296 (36%), Gaps = 46/296 (15%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            YN L++ + R     V     +++ + + E FG          N ++   C+ G    A
Sbjct: 126 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQF-------LNVLVRKHCRNGSFSIA 178

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E   ++KD    P   TY  +I+ F  A+  + A  +  EM    ++ D  T       
Sbjct: 179 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 238

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK GK            WR                          +    +E+   + D
Sbjct: 239 LCKVGK------------WR--------------------------EALTLVETENFVPD 260

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V Y  LI+  C+    EEA+   + M +    P VVTY+TL  G     Q+ R  ++ +
Sbjct: 261 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 320

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M           +N+ +   C SG    A +L + +    +    V YN LI  +
Sbjct: 321 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 376


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/406 (33%), Positives = 210/406 (51%), Gaps = 7/406 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP   +  +++ G   K+   D+ L +F ++   G  P+  T+S LIN  C  GRV+  F
Sbjct: 247 SPDTFTYTSMILGHCRKHD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            ++  ++     P A T T  I  LC      +A  LF   +   CEP+V+TY  LI+GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C +G   VA+ LF  M+  +G F     PNTVTYN +I+ L +   +  A  +   M   
Sbjct: 366 CVSGLLKVAIGLFHRMSR-DGVF-----PNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             +P++VTY  +I+G+C   D  +A  +   M+ +G   ++VT++ I+   C +G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R+L+LM   G  P+ ++Y  LI G+C   K++ A  LF  M  +G   + V+Y  LI+ 
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YCK++ ++ A SL   M   G +P V TYN L  GL + +    A +L   M    +  +
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY   IDGLCK+G    ALE+F  + +     N+++Y+ LI  L
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+  + R+ S G+ P++  ++ +IN  CK G V+    ++ ++  S  +P+  T+TS+I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            G C +  +  A  +F +     CEP+  TY+TLINGLC +G    A +L  EM      
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----L 313

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
            G++  P   T    I  LC  G  + A  LF+ MK++   P+V TYT++I G C +   
Sbjct: 314 HGIL--PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A  LF  M   GV P+ VT++ +++ L +N ++  A  +L LM   G +PN  TYN +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I GYC+      A  +  +M   G   ++V+YNT+I  YC + +   AL +   M   G 
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP   +Y  L  G  +I ++E A  LF+EM  + +  +  TY   IDG CK   +  A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   ++ S    N+ +YN LI GL
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGL 575



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 195/383 (50%), Gaps = 10/383 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           +S    L+ +GL   ++ +S L+    ++G  +       R+L     PN + + ++I  
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 187 LCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           LC +  + +A  +  K  VF  E  PD FTY ++I G CR      AL +F +MA     
Sbjct: 225 LCKDGNVADAETIMKK--VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-- 280

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C+PNTVTY+T+I+GLC  G V++A +L  +M    I P   T T  I   C    +
Sbjct: 281 ----CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A RLF++M ++G +P+V T++ ++  LC +G +  A  L   M   GV PNT TYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+      +I +A  +   M  NGC  ++V+YN +I  YC   D ++A+ + + ML +G 
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
              +VTYNT+  G  +      AL++ D MR      D ++Y   I G CK   +  A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           LF  + D     N V+Y  LIDG
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDG 539



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 186/386 (48%), Gaps = 6/386 (1%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           Y+    LF  + + G  P++YT++ LI+  C  G +     +  R+ R    PN VT+ +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           LI  L    RI  A  +        C P++ TYN +I G C  G    A+ +   M    
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                    N VTYNTII G C  G    A  +   M+D    PD  +YT +I GFC  +
Sbjct: 456 HS------ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
               A  LF EM+D G+ P+ VT++ ++D  CK+ K+D A+ LLE M   G  PN  TYN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G    +    A +L   M   G   +VV+Y  +I+  CKN     AL ++++M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P ++TY++L   L +  +VE A  LF E+ R+ +  D  TY   I+    SG V  A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
                 +  +  +  + +Y  LI GL
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 143/339 (42%), Gaps = 23/339 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L K  ++     L K +   G+FP++ T++ +I+  CK G  S    +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN +T++SLI+ L  E ++ EA  LF +       PD  TY  +I     
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A N    M          C+P   TY  +I GL  E  +   +   L       
Sbjct: 683 SGKVEHAFNFLGRMIKAG------CQPTLWTYGVLIKGLKNEYLLADQRLAAL------- 729

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            PDVV   S    F Y     +A  +    +  +D G+   V   + ++  L   G+  +
Sbjct: 730 -PDVVPNCS----FGYQTTDQDAVSVMSAKLAELDPGLSVQVQ--NALVSNLSTAGRWFE 782

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A+ LL  MI +G+ P+   YN+L+        +D A  +F  M + GC   +  Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
             C+    +EA   +  ML +   P  V    L  GL  
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 23/393 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L     K++  DT  SL + +  +G  P++ T+++LI+   K    S    +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PN VT+T++I GLC       A  +F K     C P++ TY++LI  L +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A NLF E+       G++  P+ +TY  +I+     G V+ A     +M     
Sbjct: 648 EGKVEEAENLFAELE----RHGLI--PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV-TFSVIMDELCKNGKMDKAS 343
            P + TY  +I+G    N++  A +    +      PDVV   S       ++     ++
Sbjct: 702 QPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCSFGYQTTDQDAVSVMSA 753

Query: 344 RLLELMIWRGVNP--NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           +L EL      +P  +    N L+       +   A +L  SM S G   D  +YN+L+ 
Sbjct: 754 KLAEL------DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 807

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              + ++V+ A+ ++  M ++G +  +  Y  L   L ++H+ + A   F+ M       
Sbjct: 808 SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 867

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           D       IDGL + G+    +E    +   +Y
Sbjct: 868 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 299 CYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGK----MDKASRLLELMIWRG 353
           C++ +       F++M+ Q G++  +  +S ++  L + G     MD+  R+L      G
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS----EG 210

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V PN   YN +I+  C    +  A  +   +  +    D  +Y ++I  +C+  D++ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++++M  +G +P  VTY+TL  GL +  +V  A  L  EM  + +    +T    I  L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C  G   +A  LF  +++   E N+ +Y  LI GL
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 58/163 (35%), Gaps = 6/163 (3%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   + L++     GR      +LG ++     P+   + SL+  L     +  A  +F 
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                 CE  +  Y  LI  LC+      A   FE M            P+ V    +ID
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM------LMRTWNPDDVVQAVLID 877

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
           GL ++G+ D   E    M+     P    YT + R       W
Sbjct: 878 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSW 920


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 199/405 (49%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N +          +   ++F  +   G+ PD  +  +++   C MGRV      
Sbjct: 187 PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERW 246

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++   F  +  T T +I   C +  +      F K       P+V  +  LINGLC+
Sbjct: 247 LNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDEN 283
            G    A  L EEM           KPN  T+ T+IDGLCK+G+ +KA  LFLK+ + + 
Sbjct: 307 QGSIKQAFELLEEMVRRGW------KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG 360

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P+V TYT++I G+C  +  N A+ L   M +QG+ P+  T++ ++D  CK G   +A 
Sbjct: 361 YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAY 420

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L++LM   G +PN YTYN +IDG C    +D A +L   +  +G   D V+Y  L++ +
Sbjct: 421 ELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVH 480

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+  D   +L  +++ML  G  P + +Y TL        Q++ + +LF+E     +    
Sbjct: 481 CRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTK 540

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY + I G C+ G    A++LF+ + +     + ++Y  LI GL
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 196/397 (49%), Gaps = 10/397 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L   L K         L + +   G  P++YTH+ LI+  CK G     F +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 165 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             +++RS  + PN  T+T++I G C E ++  A  L ++ +     P+  TY TLI+G C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+ + A  L + M    G+ G    PN  TYN IIDGLCK+G +D+A  L  K+    
Sbjct: 412 KVGNFVRAYELMDLM----GKEGF--SPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  D VTYT ++   C   D N +   F +M+  G  PD+ +++ ++   C+  +M ++ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           RL E  +  G+ P   TY ++I GYC       A KLF  M ++GC  D ++Y  LI+  
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   +++A +LY  M+ KG+ P  VT  TL     +      A+ + D + +       
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---I 642

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
            T N  +  LC  G +  A   F  + D +  +N V+
Sbjct: 643 RTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 42/311 (13%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A+N+  EM N     G+V  P+T T N ++D     G V+ A+ +F++M    ++PD V+
Sbjct: 173 AVNMVVEMQNQ----GLV--PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 291 Y-----------------------------------TSVIRGFCYANDWNEAKRLFIEMM 315
           +                                   T +I  FC     N     F +M+
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G+ P+V+ F+ +++ LCK G + +A  LLE M+ RG  PN YT+ TLIDG C     +
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 376 HARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            A +LF+ +  S+G   +V +Y  +IN YCK   +  A  L S M  +G+ P   TY TL
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G  ++    RA +L D M +   + + YTYN  IDGLCK G + EA  L   +     
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 495 ELNIVSYNCLI 505
           + + V+Y  L+
Sbjct: 467 QADGVTYTILM 477



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 175/377 (46%), Gaps = 16/377 (4%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAG 137
           QG I      +A  + + M+R     P V +   L   L K    +    LF +L  S G
Sbjct: 307 QGSIK-----QAFELLEEMVR-RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG 360

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
             P+++T++ +IN +CK  +++   ++L R+      PN  T+T+LI G C     + A 
Sbjct: 361 YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAY 420

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            L          P+++TYN +I+GLC+ G    A  L  +++          + + VTY 
Sbjct: 421 ELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG------LQADGVTYT 474

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            ++   C++   +++   F KM      PD+ +YT++I  FC      E++RLF E +  
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSL 534

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ P   T++ ++   C+ G    A +L + M   G  P++ TY  LI G C   K+D A
Sbjct: 535 GLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           R L+ +M   G     V+  TL   YCK  D   A+++   +     +  + T NTL   
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRK 651

Query: 438 LFEIHQVERALKLFDEM 454
           L    +++ A   F ++
Sbjct: 652 LCSEGKLDMAALFFHKL 668



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 9/334 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  ++R     P V ++  +     K    +    L  R+   GL P+  T++ L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK+G     + ++  + +  F+PN  T+ ++I GLC +  + EA  L  K  V   
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D  TY  L++  CR   T  +L  F +M        V   P+  +Y T+I   C++  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKM------LKVGFTPDIHSYTTLISTFCRQKQ 520

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +++ LF +     + P   TYTS+I G+C   + + A +LF  M + G  PD +T+  
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK  K+D A  L + M+ +G++P   T  TL   YC  D    A  +   +E   
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            +  V   NTL+   C    ++ A   + ++L K
Sbjct: 641 WIRTV---NTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 1/215 (0%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++  F       EA  + +EM +QG+ P   T + ++D     G ++ A  +   M  RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V+P+  ++  ++   C   ++  A +   +M   G + D  +   +I+ +C+   V   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             + +M+  G+ P V+ +  L  GL +   +++A +L +EM R     + YT+   IDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 474 CKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDG 507
           CK G+  +A  LF + +R   Y+ N+ +Y  +I+G
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 211/434 (48%), Gaps = 43/434 (9%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L   L ++++++   S ++++     F +  + S L+ C+ +M +    F VL  +L+
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
             F  N      L+KGLC      +A +L  + R  +  PDVF+YNT+I G C       
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL L  EM  G+G     C  + VT+  +ID  CK G +D+A     +MK   +  D+V 
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YTS+IRGFC   + +  K LF E++++G  P  +T++ ++   CK G++ +AS + E MI
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RGV PN YTY  LIDG C   K   A +L   M       + V+YN +IN  CK+  V 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN--HVAADTYTYNN 468
           +A+ +   M  +  +P  +TYN L  GL     ++ A KL   M ++  +   D  +YN 
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 469 FIDGLC-----------------------------------KSGFVLEALELFRAIRDSK 493
            I GLC                                   K+G V +A+EL++ I DSK
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 494 YELNIVSYNCLIDG 507
              N  +Y  +IDG
Sbjct: 490 IVRNSDTYTAMIDG 503



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 10/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NIL   L +N      +SL + +    L PD+++++ +I  FC+   +     +  
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  S  + + VT+  LI   C   ++ EA     + +    E D+  Y +LI G C  G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 227 HTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                  LF+E +  G+        P  +TYNT+I G CK G + +A E+F  M +  + 
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+V TYT +I G C      EA +L   M+++  +P+ VT+++I+++LCK+G +  A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWY 403
           +ELM  R   P+  TYN L+ G C    +D A KL   M  +S+    DV+SYN LI+  
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   + +AL +Y  ++ K      VT N L     +   V +A++L+ ++  + +  ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   IDG CK+G +  A  L   +R S+ + ++  YNCL+  L
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 199/400 (49%), Gaps = 8/400 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ IL     K    D  +   K +   GL  D+  ++ LI  FC  G +  G  +   +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L    +P A+T+ +LI+G C   ++ EA+ +F         P+V+TY  LI+GLC  G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L   M   + E      PN VTYN II+ LCK+G V  A E+   MK     PD 
Sbjct: 334 KEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +TY  ++ G C   D +EA +L   M+       PDV++++ ++  LCK  ++ +A  + 
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           +L++ +    +  T N L++       ++ A +L+  +  +  + +  +Y  +I+ +CK 
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +  A  L  +M    ++P+V  YN L   L +   +++A +LF+EM+R++   D  ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           N  IDG  K+G +  A  L   +  +    ++ +Y+ LI+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 198/413 (47%), Gaps = 10/413 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R +   P V S+N +     + K  +  L L   +  +G    + T  ILI+ FCK G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +      L  +       + V +TSLI+G C    +    ALF +       P   TYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI G C+ G    A  +FE M     E GV  +PN  TY  +IDGLC  G   +A +L  
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMI----ERGV--RPNVYTYTGLIDGLCGVGKTKEALQLLN 341

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M +++  P+ VTY  +I   C      +A  +   M  +  +PD +T+++++  LC  G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401

Query: 338 KMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            +D+AS+LL LM+      +P+  +YN LI G C  +++  A  ++  +       D V+
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            N L+N   K  DV +A+ L+ ++    I     TY  +  G  +   +  A  L  +MR
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDG 507
            + +    + YN  +  LCK G + +A  LF  + RD+ +  ++VS+N +IDG
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMIDG 573



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 191/438 (43%), Gaps = 40/438 (9%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD +L    SP  ++ +N L     K         +F+ +   G+ P++YT++ LI+  
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C +G+      +L  ++     PNAVT+  +I  LC +  + +A  +    +     PD 
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE------ 266
            TYN L+ GLC  G    A  L   M   +        P+ ++YN +I GLCKE      
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443

Query: 267 -----------------------------GFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                                        G V+KA EL+ ++ D  I  +  TYT++I G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC     N AK L  +M    +QP V  ++ ++  LCK G +D+A RL E M      P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             ++N +IDG      I  A  L V M   G   D+ +Y+ LIN + K   ++EA+S + 
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +M+  G +P     +++        + ++  +L  ++    +  D       +D +C S 
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683

Query: 478 FVLEALELFRAIRDSKYE 495
             ++  +    + D K E
Sbjct: 684 ANMDLAKRLLRVTDDKEE 701



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 140/257 (54%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N   +N ++ GLC+     KA  L  +M+  ++ PDV +Y +VIRGFC   +  +A  L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM   G    +VT+ +++D  CK GKMD+A   L+ M + G+  +   Y +LI G+C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            ++D  + LF  +   G     ++YNTLI  +CK   ++EA  ++  M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  GL  + + + AL+L + M       +  TYN  I+ LCK G V +A+E+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 492 SKYELNIVSYNCLIDGL 508
            +   + ++YN L+ GL
Sbjct: 381 RRTRPDNITYNILLGGL 397



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 106/195 (54%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+ +G   +V   ++++  LC+N +  KA  LL  M    + P+ ++YNT+I G+C   +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A +L   M+ +GC   +V++  LI+ +CK   ++EA+    EM   G++  +V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +  +++R   LFDE+     +    TYN  I G CK G + EA E+F  + +  
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 494 YELNIVSYNCLIDGL 508
              N+ +Y  LIDGL
Sbjct: 313 VRPNVYTYTGLIDGL 327


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 216/405 (53%), Gaps = 14/405 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN++   + K    D  + +F+ +  +   PD+YT+  L++  CK  R+     +
Sbjct: 167 PNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSL 226

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L  + +  CF P+ VTF  LI GLC +  +   A L     +  C P+  TYNTLI+GLC
Sbjct: 227 LDEMQIDGCF-PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 285

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG-FVDKAKELFLKMKDE 282
             G    A++L + M +        C PN VTY TII+GL K+G  +D A+ L L M++ 
Sbjct: 286 LKGKLEKAISLLDRMVSSK------CVPNVVTYGTIINGLVKQGRALDGARVLAL-MEER 338

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
             + +   Y+++I G        EA +LF EM  +  + + + +S ++D LC++GK D+A
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +L  M      PN YTY++L+ G+        A +++  M  +    + V Y+ LI+ 
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVA 460
            CK+  V+EA+ ++++ML KG KP VV Y ++  GL     VE AL+L++EM  +     
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ 518

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            D  TYN  ++ LCK   +  A++L  ++ D   + ++V+  C+I
Sbjct: 519 PDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT--CII 561



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 6/336 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +PN +TF  +IK +C    + +A  +F    V  C+PDV+TY TL++GLC+      A+
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L +EM          C P+ VT+N +I+GLCK+G + +  +L   M  +   P+ VTY 
Sbjct: 225 SLLDEMQIDG------CFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYN 278

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G C      +A  L   M+     P+VVT+  I++ L K G+    +R+L LM  R
Sbjct: 279 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G + N Y Y+ LI G     K   A +LF  M    C  + + Y+ +I+  C++   +EA
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L + SEM +   KP   TY++L  G FE     +A++++ +M +++   +   Y+  I G
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G V EA+ ++  +     + ++V+Y  +I+GL
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL 494



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 177/341 (51%), Gaps = 11/341 (3%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTG 226
           ++  CF    V F +  K    E    +A  LF +    F C+  V ++N+++N + + G
Sbjct: 93  VVEKCFV---VIFKAYGKAHLPE----KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEG 145

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL  +  +    G  GV   PN +T+N +I  +CK G VD A ++F  M      P
Sbjct: 146 LFYRALEFYNHVI---GAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQP 202

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV TY +++ G C A+  +EA  L  EM   G  P  VTF+V+++ LCK G + + ++L+
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLV 262

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  +G  PN  TYNTLI G CL  K++ A  L   M S+ C+ +VV+Y T+IN   K 
Sbjct: 263 DNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 322

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
               +   + + M  +G       Y+ L  GLF+  + + A++LF EM       +T  Y
Sbjct: 323 GRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVY 382

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  IDGLC+ G   EALE+   + +++ + N  +Y+ L+ G
Sbjct: 383 SAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKG 423



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 155/284 (54%), Gaps = 14/284 (4%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF---LKMKDENINPD 287
           A+ LF+ MA     +   CK    ++N++++ + +EG   +A E +   +  K  NI+P+
Sbjct: 114 AVGLFDRMA-----YEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPN 168

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V+T+  VI+  C     ++A ++F +M     QPDV T+  +MD LCK  ++D+A  LL+
Sbjct: 169 VLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLD 228

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G  P+  T+N LI+G C    +    KL  +M   GC  + V+YNTLI+  C   
Sbjct: 229 EMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKG 288

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV---ERALKLFDEMRRNHVAADTY 464
            +E+A+SL   M+S    P VVTY T+  GL +  +     R L L +E R  HV  + Y
Sbjct: 289 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEE-RGYHV--NEY 345

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y+  I GL K G   EA++LF+ +   + ELN + Y+ +IDGL
Sbjct: 346 VYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGL 389



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 18/261 (6%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L ++   D  L +   + +    P+ YT+S L+  F + G       +   + +  FT N
Sbjct: 389 LCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQN 448

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V ++ LI GLC + ++ EA  ++ +     C+PDV  Y ++INGL   G    AL L+ 
Sbjct: 449 EVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYN 508

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM     +     +P+ VTYN +++ LCK+  + +A +L   M D   +PD+VT    +R
Sbjct: 509 EMLCQEPD----SQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLR 564

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                 D  +  R F++ +              +  L K  ++  AS+++E+M+ + + P
Sbjct: 565 TLREKLDPPQDGREFLDGL--------------VVRLLKRQRVLGASKIVEVMLQKLLPP 610

Query: 357 NTYTYNTLIDGYCLTDKIDHA 377
              T+  +++  C   K+  A
Sbjct: 611 KPSTWTRVVEDLCNPKKVQAA 631


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 17/425 (4%)

Query: 42  EPSYPTTTSKLKESLRLTV-KDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRM 100
           E SY      L E L + +  + A+    L E C+             EA  +F+ ML+ 
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVW--------EAERVFNEMLQ- 357

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
               P + SF+ + G  ++N      L+ F+++   GL PD   ++ILIN +C+   VS 
Sbjct: 358 RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSG 417

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +   ++      + VT+ +L+ GLC    + +A  LF +       PD +T  TLI+
Sbjct: 418 ALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIH 477

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C+ G+   AL+LFE M   +       KP+ VTYNT++DG CK G ++KAKEL+  M 
Sbjct: 478 GYCKDGNMTKALSLFETMTLRS------LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              I P  ++++ +I GFC     +EA RL+ EM ++G++P +VT + I+    + G + 
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA+  L  MI  GV P+  TYNTLI+ +   +  D A  L  +ME  G + ++V+YN ++
Sbjct: 592 KANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHV 459
             + ++  ++EA  +  +M+ KGI P   TY +L  G      ++ A ++ DEM +R  V
Sbjct: 652 GGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFV 711

Query: 460 AADTY 464
             D +
Sbjct: 712 PDDKF 716



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 202/401 (50%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  F++L     + +        F+ L   G    I   + L+    K+G V   + V  
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
             ++S    N  T   ++  LC + ++       ++        D+ TYNTL+N  CR G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L + MA G G      KP   TYN +I+GLCKEG  ++AK +  +M    + P
Sbjct: 274 LVSEAFGLVDCMA-GKG-----LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +  T+  ++   C   D  EA+R+F EM+ +GV PD+++FS I+    +NG++ +A    
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M   G+ P+T  Y  LI+GYC  D +  A K+   M   GC+ DVV+YNTL+N  C+ 
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K +++A  L+ EM+ +G+ P   T  TL  G  +   + +AL LF+ M    +  D  TY
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  +DG CK G + +A EL+  +   +   + +S++ LI+G
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILING 548



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 194/399 (48%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L     +         L   +   GL P ++T++ LIN  CK G       VL  +
Sbjct: 261 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L     PNA TF  ++   C +  + EA  +F +       PD+ ++++++    R G  
Sbjct: 321 LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL  FE+M       GV   P+TV Y  +I+G C+   V  A ++  +M +     DV
Sbjct: 381 GRALAYFEKMK------GVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDV 434

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY +++ G C     ++A  LF EM+++GV PD  T + ++   CK+G M KA  L E 
Sbjct: 435 VTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFET 494

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  R + P+  TYNTL+DG+C   +++ A++L+  M S       +S++ LIN +C    
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 554

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V EA  L+ EM  KGIKPT+VT NT+  G      + +A    + M    V  D  TYN 
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I+   K      A  L   + +     N+V+YN ++ G
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 653



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 209/401 (52%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +++ N L G + K    D    +++    +G   ++YT +I++N  CK G++ +  V L 
Sbjct: 189 INACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLS 248

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +       + VT+ +L+   C    + EA  L         +P +FTYN LINGLC+ G
Sbjct: 249 EMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEG 308

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  + +EM       GV   PN  T+N ++   C++  V +A+ +F +M    + P
Sbjct: 309 SYERAKRVLDEM------LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVP 362

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+++++S++  F    +   A   F +M   G+ PD V ++++++  C+N  +  A ++ 
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+ RG   +  TYNTL++G C    +D A +LF  M   G   D  +  TLI+ YCK+
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++ +ALSL+  M  + +KP VVTYNTL  G  ++ ++E+A +L+ +M    +     ++
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  I+G C  G V EA  L+  +++   +  +V+ N +I G
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 199/403 (49%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K   Y+    +   +   GL P+  T + ++   C+   V     V
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERV 351

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+    P+ ++F+S++        +  A A F K +     PD   Y  LING CR
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL +  EM     E G  C  + VTYNT+++GLC+   +D A ELF +M +  +
Sbjct: 412 NDDVSGALKMRNEMV----ERG--CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T T++I G+C   +  +A  LF  M  + ++PDVVT++ +MD  CK G+M+KA  
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI R + P+  +++ LI+G+C    +  A +L+  M+  G    +V+ NT+I  Y 
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +  ++ +A    + M+S+G+ P  +TYNTL     +    +RA  L + M    +  +  
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  + G  + G + EA  +   + D     +  +Y  LI+G
Sbjct: 646 TYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++FN +     + +       +F  +   G+ PD+ + S ++  F + G +      
Sbjct: 327 PNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++      P+ V +T LI G C    +  A  +  +     C  DV TYNTL+NGLCR
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LF+EM     E GV   P+  T  T+I G CK+G + KA  LF  M   ++
Sbjct: 447 GKMLDDADELFKEMV----ERGVF--PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSL 500

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDVVTY +++ GFC   +  +AK L+ +M+ + + P  ++FS++++  C  G + +A R
Sbjct: 501 KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFR 560

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G+ P   T NT+I GY     +  A     +M S G   D ++YNTLIN + 
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K ++ + A  L + M  +G+ P +VTYN +  G     +++ A  +  +M    +  D  
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKS 680

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
           TY + I+G      + EA  +
Sbjct: 681 TYTSLINGYVSKDNMKEAFRV 701



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 143/254 (56%), Gaps = 4/254 (1%)

Query: 257 NTIIDGLCKEGFVDKAKELFLK-MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           N ++  + K G+VD A +++   +K  NI  +V T   ++   C     +       EM 
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEME 251

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           ++GV  D+VT++ +++  C+ G + +A  L++ M  +G+ P  +TYN LI+G C     +
Sbjct: 252 EKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYE 311

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A+++   M   G   +  ++N ++   C+ +DV EA  +++EML +G+ P +++++++ 
Sbjct: 312 RAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSI- 370

Query: 436 LGLFEIH-QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           +G+F  + ++ RAL  F++M+   +  DT  Y   I+G C++  V  AL++   + +   
Sbjct: 371 VGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGC 430

Query: 495 ELNIVSYNCLIDGL 508
            +++V+YN L++GL
Sbjct: 431 VMDVVTYNTLLNGL 444



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 62/149 (41%)

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            ++ LI  Y    K+    + F  +   G    + + N L+    K   V+ A  +Y + 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           +  G    V T N +   L +  +++       EM    V AD  TYN  ++  C+ G V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EA  L   +     +  + +YN LI+GL
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGL 304


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 194/382 (50%), Gaps = 7/382 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           ++F  +   G+ PD  +  +++   C MGRV      L  ++   F  +  T T +I   
Sbjct: 210 NMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAF 269

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C +  +      F K       P+V  +  LINGLC+ G    A  L EEM         
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW---- 325

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNE 306
             KPN  T+ T+IDGLCK+G+ +KA  LFLK+ + +   P+V TYT++I G+C  +  N 
Sbjct: 326 --KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ L   M +QG+ P+  T++ ++D  CK G   +A  L++LM   G +PN YTYN +ID
Sbjct: 384 AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID 443

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G C    +D A +L   +  +G   D V+Y  L++ +C+  D   +L  +++ML  G  P
Sbjct: 444 GLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            + +Y TL        Q++ + +LF+E     +     TY + I G C+ G    A++LF
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
           + + +     + ++Y  LI GL
Sbjct: 564 QRMSNHGCAPDSITYGALISGL 585



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 207/402 (51%), Gaps = 12/402 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA---GLFPDIYTHSILI 149
           +F  M +   SP  VS   ++  C    +    VL   K LN+    G   D  T +++I
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGR----VLEAEKWLNAMVERGFIVDNATCTLII 266

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + FC+ G V+       +++     PN + FT+LI GLC +  I +A  L  +      +
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V+T+ TLI+GLC+ G T  A  LF ++   +G      KPN  TY  +I+G CKE  +
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY-----KPNVHTYTAMINGYCKEDKL 381

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+ L  +M+++ + P+  TYT++I G C   ++  A  L   M  +G  P++ T++ I
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LCK G +D+A RLL  +   G+  +  TY  L+  +C     + +   F  M   G 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D+ SY TLI+ +C+ K ++E+  L+ E +S G+ PT  TY ++  G         A+K
Sbjct: 502 TPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           LF  M  +  A D+ TY   I GLCK   + +A  L+ A+ D
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 196/397 (49%), Gaps = 10/397 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F  L   L K         L + +   G  P++YTH+ LI+  CK G     F +
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 165 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             +++RS  + PN  T+T++I G C E ++  A  L ++ +     P+  TY TLI+G C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+ + A  L + M    G+ G    PN  TYN IIDGLCK+G +D+A  L  K+    
Sbjct: 412 KVGNFVRAYELMDLM----GKEGF--SPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  D VTYT ++   C   D N +   F +M+  G  PD+ +++ ++   C+  +M ++ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           RL E  +  G+ P   TY ++I GYC       A KLF  M ++GC  D ++Y  LI+  
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   +++A +LY  M+ KG+ P  VT  TL     +      A+ + D + +       
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---I 642

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
            T N  +  LC  G +  A   F  + D +  +N V+
Sbjct: 643 RTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVT 679



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 175/377 (46%), Gaps = 16/377 (4%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAG 137
           QG I      +A  + + M+R     P V +   L   L K    +    LF +L  S G
Sbjct: 307 QGSIK-----QAFELLEEMVR-RGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG 360

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
             P+++T++ +IN +CK  +++   ++L R+      PN  T+T+LI G C     + A 
Sbjct: 361 YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAY 420

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            L          P+++TYN +I+GLC+ G    A  L  +++          + + VTY 
Sbjct: 421 ELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG------LQADGVTYT 474

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            ++   C++   +++   F KM      PD+ +YT++I  FC      E++RLF E +  
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSL 534

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ P   T++ ++   C+ G    A +L + M   G  P++ TY  LI G C   K+D A
Sbjct: 535 GLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           R L+ +M   G     V+  TL   YCK  D   A+++   +     +  + T NTL   
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRK 651

Query: 438 LFEIHQVERALKLFDEM 454
           L    +++ A   F ++
Sbjct: 652 LCSEGKLDMAALFFHKL 668



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 156/334 (46%), Gaps = 9/334 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F  ++R     P V ++  +     K    +    L  R+   GL P+  T++ L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK+G     + ++  + +  F+PN  T+ ++I GLC +  + EA  L  K  V   
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D  TY  L++  CR   T  +L  F +M        V   P+  +Y T+I   C++  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKM------LKVGFTPDIHSYTTLISXFCRQKQ 520

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +++ LF +     + P   TYTS+I G+C   + + A +LF  M + G  PD +T+  
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK  K+D A  L + M+ +G++P   T  TL   YC  D    A  +   +E   
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            +  V   NTL+   C    ++ A   + ++L K
Sbjct: 641 WIRTV---NTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 146/311 (46%), Gaps = 42/311 (13%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A+N+  EM N     G+V   +T T N ++D     G V+ A+ +F++M    ++PD V+
Sbjct: 173 AVNMVVEMQNQ----GLV--XSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE------------------ 332
           +  ++   C      EA++    M+++G   D  T ++I+D                   
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 333 -----------------LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                            LCK G + +A  LLE M+ RG  PN YT+ TLIDG C     +
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 376 HARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            A +LF+ +  S+G   +V +Y  +IN YCK   +  A  L S M  +G+ P   TY TL
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G  ++    RA +L D M +   + + YTYN  IDGLCK G + EA  L   +     
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 495 ELNIVSYNCLI 505
           + + V+Y  L+
Sbjct: 467 QADGVTYTILM 477



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 1/215 (0%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++  F       EA  + +EM +QG+     T + ++D     G ++ A  +   M  RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V+P+  ++  ++   C   ++  A K   +M   G + D  +   +I+ +C+   V   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             + +M+  G+ P V+ +  L  GL +   +++A +L +EM R     + YT+   IDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 474 CKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDG 507
           CK G+  +A  LF + +R   Y+ N+ +Y  +I+G
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 218/422 (51%), Gaps = 16/422 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL-FPDIYTHSIL 148
           AL +FD M R     P V  +N++     K   +     +++RL    L FP + +++++
Sbjct: 202 ALEVFDEM-RERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVM 260

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK GR S G  +  R+ ++    +  T+++LI GL     +  A  ++ +      
Sbjct: 261 ISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV T N ++NGLC+ G+      L+EEM       G     N  +YN  + GL + G 
Sbjct: 321 RPDVVTCNAMLNGLCKAGNVEECFELWEEM-------GKCSLRNVRSYNIFLKGLFENGK 373

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF--IEMMDQGVQPDVVTF 326
           VD A  L+    D  +  D  TY  V+ G C+    N A ++    E  + G+  D   +
Sbjct: 374 VDDAMMLW----DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAY 429

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S +++ LCK G++D+A  ++ELM  RG   N++  N LIDG+    K+D A K+F  M  
Sbjct: 430 SSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSG 489

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC   VVSYN LIN   + +   EA    +EML KG KP ++TY+TL  GL+E + ++ 
Sbjct: 490 KGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDA 549

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+L+ +        D   YN  I  LC SG V +AL+L+  +R  K  +N+V++N +++
Sbjct: 550 ALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIME 608

Query: 507 GL 508
           G 
Sbjct: 609 GF 610



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 219/454 (48%), Gaps = 37/454 (8%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           PNEAL +F  M  +    P + SFN L     ++  +    + FK   +A + P++ T++
Sbjct: 93  PNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYN 152

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +L+   CK G    G  +L  +  +  +P+ +T+ +LI G+     +  A  +F + R  
Sbjct: 153 VLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRER 212

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             EPDV  YN +I+G  + G  + A  ++E +      F     P+ V+YN +I GLCK 
Sbjct: 213 GVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVF-----PSVVSYNVMISGLCKC 267

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G   +  E++ +MK      D+ TY+++I G   A D   A++++ EM+ +GV+PDVVT 
Sbjct: 268 GRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTC 327

Query: 327 SVIMDELCKNGKMDKASRLLE-----------------------------LMIWRG-VNP 356
           + +++ LCK G +++   L E                             +M+W G +  
Sbjct: 328 NAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEA 387

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSME--SNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           ++ TY  ++ G C    ++ A ++    E    G   D  +Y++LIN  CK   ++EA  
Sbjct: 388 DSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADG 447

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +   M  +G K      N L  G  +  +++ A+K+F EM     +    +YN  I+GL 
Sbjct: 448 VVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLL 507

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++    EA +    + +  ++ +I++Y+ LI GL
Sbjct: 508 RAERFREAYDCVNEMLEKGWKPDIITYSTLIGGL 541



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 194/439 (44%), Gaps = 62/439 (14%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +++ +LR     P V S+N++   L K   +   L +++R+       D++T+S LI+  
Sbjct: 240 MWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGL 299

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK---------- 202
            + G +     V   ++     P+ VT  +++ GLC    + E   L+ +          
Sbjct: 300 SEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVR 359

Query: 203 -HRVFA-------------------CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
            + +F                     E D  TY  +++GLC  G+   AL + EE  +  
Sbjct: 360 SYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHRE 419

Query: 243 G-----EF-------------------GVV-------CKPNTVTYNTIIDGLCKEGFVDK 271
           G     EF                   GVV       CK N+   N +IDG  K   +D 
Sbjct: 420 GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDS 479

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ++F +M  +  +  VV+Y  +I G   A  + EA     EM+++G +PD++T+S ++ 
Sbjct: 480 AVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIG 539

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            L ++  MD A RL    +  G  P+   YN +I   C + K++ A +L+ ++    C+ 
Sbjct: 540 GLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV- 598

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           ++V++NT++  + K  + E A  +++ +L   ++P +++YN    GL    +V  A+   
Sbjct: 599 NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFL 658

Query: 452 DEMRRNHVAADTYTYNNFI 470
           D+           T+N  +
Sbjct: 659 DDALVRGFLPTAITWNILV 677



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 160/347 (46%), Gaps = 52/347 (14%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-----CEPDVFTYNTLINGL 222
           + R  F+P++  F  +++ + A+  ++ A A     R+ A     C  DV    TL+   
Sbjct: 34  VRRPGFSPSSAVFHHILRRVAADPGLLLAHA----PRIIAAIHCPCPEDVPL--TLLKAY 87

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            +T     AL++F+ M +  G     C P   ++NT+++                     
Sbjct: 88  AKTRMPNEALHVFQTMPHVFG-----CSPTIRSFNTLLNA-------------------- 122

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
                          F  ++ W  A+  F       V P+V T++V+M  +CK G+ +K 
Sbjct: 123 ---------------FVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKG 167

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             LL  M   G++P+  TY TLI G   +  +  A ++F  M   G   DVV YN +I+ 
Sbjct: 168 RGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDG 227

Query: 403 YCKNKDVEEALSLYSEMLSKGIK-PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
           + K  D  +A  ++  +L + +  P+VV+YN +  GL +  +    L++++ M++N    
Sbjct: 228 FFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC 287

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D +TY+  I GL ++G +  A +++  +       ++V+ N +++GL
Sbjct: 288 DLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGL 334



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 34/152 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P + +++ L G L ++   D  L L+ +    G  PDI  ++I+I+  C  G+V      
Sbjct: 529 PDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQL 588

Query: 160 -------------------HGFVVLG----------RILRSCFTPNAVTFTSLIKGLCAE 190
                               GF  +G           IL     P+ +++   +KGLC+ 
Sbjct: 589 YSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSC 648

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            R+ +A        V    P   T+N L+  +
Sbjct: 649 GRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 10/425 (2%)

Query: 86  TPNEALCIFDYM--LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           +P  +L  F  +  LR+HP+     +FN+L             LS   ++   GL PD  
Sbjct: 189 SPQASLDAFHSLIALRLHPNH---YTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAV 245

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T++ L+N  C+ G +     +L R+ +    P   T+ +L+        I +A  +    
Sbjct: 246 TYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM 305

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
             F  EPD++TYN L  GLC+ G    A  L +EM     + G+V  P+ VTYNT++D  
Sbjct: 306 TAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME----QLGIVS-PDVVTYNTLVDAC 360

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K      A  L  +M+++ +   +VT+  +++G C      EA      M ++G+ PDV
Sbjct: 361 FKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDV 420

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           +T++ ++D  CK G + KA  L++ M+  G+  +T+T NTL+   C   + + A +L  +
Sbjct: 421 ITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRA 480

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
               G + D VSY T++  Y K    E AL L+ EM+ + + P++ TYNTL  GL  + +
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGK 540

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A+   +E+    +  D  TYN  I   CK G + +A +    + ++ ++ ++V+ N 
Sbjct: 541 LTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNT 600

Query: 504 LIDGL 508
           L++GL
Sbjct: 601 LMNGL 605



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 17/408 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSL--FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           P + + N +   LA++       SL  F  L +  L P+ YT ++L++  C  G ++   
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             L ++     +P+AVT+ +L+   C +  + EA  L  + +     P   TYNTL++  
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            R G    A ++ E M      FG   +P+  TYN +  GLC+ G VD+A     K+KDE
Sbjct: 290 ARLGWIKQATDVVEAMT----AFGF--EPDLWTYNVLAAGLCQAGKVDEA----FKLKDE 339

Query: 283 N-----INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
                 ++PDVVTY +++         ++A  L  EM ++GV+  +VT ++I+  LC+ G
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++++A   LE+M   G+ P+  TYNTLID  C    +  A  L   M  +G   D  + N
Sbjct: 400 QLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLN 459

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TL+   CK K  EEA  L      +G  P  V+Y T+    F+ ++ E AL L+DEM + 
Sbjct: 460 TLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKR 519

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            +     TYN  I GL   G + EA++    + +     +  +YN +I
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 208/457 (45%), Gaps = 42/457 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M ++    P V ++N L     K +     L+L + +   G+   + TH+I
Sbjct: 331 DEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNI 390

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++   C+ G++      L  +     TP+ +T+ +LI   C    + +A  L  +     
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D FT NTL+  LC+      A    EE+     + G V  P+ V+Y T++    KE 
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEA----EELLRAPPQRGFV--PDEVSYGTVMAAYFKEY 504

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A  L+ +M    + P + TY ++I+G        EA     E+M+ G+ PD  T++
Sbjct: 505 KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYN 564

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+   CK G ++KA +    M+     P+  T NTL++G CL  +++ A KLF S    
Sbjct: 565 IIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK 624

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE------- 440
           G   DV++YNTLI   CK+ DV+ AL  +++M  +G++P V TYN L   L E       
Sbjct: 625 GKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEA 684

Query: 441 ---IHQVERALKLFD--------------------------EMRRNHVAADTYTYNNFID 471
              +H++  + KL+                           E   N    D  +YN +I 
Sbjct: 685 QKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIK 744

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LC  G + EA  +   +      ++  +Y  L++GL
Sbjct: 745 ELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 188/389 (48%), Gaps = 7/389 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHGFV 163
           P + ++N+L   L +    D    L   +   G+  PD+ T++ L++   K  R S    
Sbjct: 312 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALN 371

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +       + VT   ++KGLC E ++ EA             PDV TYNTLI+  C
Sbjct: 372 LLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASC 431

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+   A  L +EM           K +T T NT++  LCKE   ++A+EL        
Sbjct: 432 KAGNVAKAFVLMDEMVRSG------LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD V+Y +V+  +        A  L+ EM+ + + P + T++ ++  L   GK+ +A 
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L  ++  G+ P+  TYN +I  YC    ++ A +    M  N    DVV+ NTL+N  
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGL 605

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    +E+A+ L+   + KG K  V+TYNTL   L + + V+ AL+ F +M    +  D 
Sbjct: 606 CLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +TYN  +  L ++G  +EA ++   + +S
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNES 694



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 184/405 (45%), Gaps = 46/405 (11%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+   L +    +  L   + +   GL PD+ T++ LI+  CK G V+  FV++  +
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEM 446

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEA-----------------------AALFTKHRV 205
           +RS    +  T  +L+  LC E R  EA                       AA F +++ 
Sbjct: 447 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKP 506

Query: 206 FAC------------EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
                           P + TYNTLI GL   G    A++   E+     E G+V  P+ 
Sbjct: 507 EPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM----EMGLV--PDD 560

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
            TYN II   CKEG ++KA +   KM + +  PDVVT  +++ G C      +A +LF  
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFES 620

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            +++G + DV+T++ ++  LCK+  +D A R    M  RG+ P+ +TYN L+       +
Sbjct: 621 WVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGR 680

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTL---INWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
              A+K+   +  +G ++    Y ++   +      KD E    + S   ++G      +
Sbjct: 681 SVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQE--S 738

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           YN     L    Q++ A  + DEM +  ++ D  TY   ++GL K
Sbjct: 739 YNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 43/288 (14%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  ALC++D M++   +P  +S++N L   L+        +     L   GL PD  T++
Sbjct: 506 PEPALCLWDEMIKRKLTPS-ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYN 564

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+I+ +CK G +   F    +++ + F P+ VT  +L+ GLC   R+ +A  LF      
Sbjct: 565 IIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEK 624

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             + DV TYNTLI  LC+      AL  F +M           +P+  TYN ++  L + 
Sbjct: 625 GKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG------LQPDVFTYNVLLSALSEA 678

Query: 267 GFVDKAKELFLKM-------------------------KDENINPDVVT----------- 290
           G   +A+++  K+                         KD  +  D+ +           
Sbjct: 679 GRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQES 738

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           Y   I+  C      EAK +  EMM +G+  D  T+  +M+ L K  K
Sbjct: 739 YNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 226/455 (49%), Gaps = 42/455 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D+M       P V S+  +   + K+    + L +F  +   GL PD+  ++I+
Sbjct: 167 EAKGLLDWMWS-KDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIM 225

Query: 149 INCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           I+ F K G    G  +  R+++ SC  PN VT+  +I GLC   R  E+  ++ + +   
Sbjct: 226 IDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CE D+FTY++LI GLC  G+   A+ +++EM   +         + VTYN +++G C+ G
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV------DVVTYNALLNGFCRAG 339

Query: 268 FVDKAKELFLKMKDENIN----------------------------------PDVVTYTS 293
            + ++ EL++ M  EN +                                   D  TY  
Sbjct: 340 KIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGV 399

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G C     N+A ++  E  D G + D   +S I+D L K G++D+A  ++  M   G
Sbjct: 400 LIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG 459

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
              + +  N LI+G+    K++ A   F  ME+ GC   VVSYNTLIN  CK +   +A 
Sbjct: 460 CELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAY 519

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           S   EML K  KP ++TY+ L  GL +  +++ AL L+ ++    +  D   +N  + GL
Sbjct: 520 SFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGL 579

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C +G + +AL L+  ++ S    N+V++N L+DGL
Sbjct: 580 CSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL 614



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 211/491 (42%), Gaps = 74/491 (15%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           PNEAL  F  M  +    P + S+N L     +    +   S      + G+ P++ T++
Sbjct: 94  PNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYN 153

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI    K  +      +L  +      P+  ++ ++I G+     ++ A  +F +    
Sbjct: 154 ILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFER 213

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV  YN +I+G  + G  +    ++E +  G+  +     PN VTYN +I+GLCK 
Sbjct: 214 GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVY-----PNVVTYNVMINGLCKM 268

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  D++ E++ +MK      D+ TY+S+I G C   + + A  ++ EM+ + V  DVVT+
Sbjct: 269 GRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTY 328

Query: 327 SVIMDELCKNGKMDKASRLLELM-----------------------------IW-----R 352
           + +++  C+ GK+ ++  L  +M                             +W     R
Sbjct: 329 NALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRR 388

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY---------------- 396
           G   ++ TY  LI G C    ++ A K+    +  G   D  +Y                
Sbjct: 389 GSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448

Query: 397 -------------------NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
                              N LIN + +   +EEA+  + EM +KG  PTVV+YNTL  G
Sbjct: 449 LGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLING 508

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  +   A     EM       D  TY+  +DGLC+   +  AL L+R +     E +
Sbjct: 509 LCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPD 568

Query: 498 IVSYNCLIDGL 508
           +  +N L+ GL
Sbjct: 569 VTMHNILMHGL 579



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 202/432 (46%), Gaps = 48/432 (11%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI--- 149
           I++ +++     P V ++N++   L K   +D  L +++R+       D++T+S LI   
Sbjct: 241 IWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGL 300

Query: 150 --------------------------------NCFCKMGRVSHGF---VVLGRILRSCFT 174
                                           N FC+ G++   F   V++G+   +C  
Sbjct: 301 CDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGK--ENCH- 357

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
            N V++   I+GL    ++ EA +++   R      D  TY  LI+GLC+ GH   AL +
Sbjct: 358 -NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKI 416

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +E  +G        K +   Y++I+DGL K+G VD+A  +  +M              +
Sbjct: 417 LKEAKDGGD------KLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPL 470

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I GF  A+   EA   F EM  +G  P VV+++ +++ LCK  +   A   ++ M+ +  
Sbjct: 471 INGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDW 530

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+  TY+ L+DG C   KID A  L+  +   G   DV  +N L++  C    +E+AL 
Sbjct: 531 KPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALL 590

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           LYS M      P +VT+NTL  GL++  + E A  ++  M +N    D  +YN  + GLC
Sbjct: 591 LYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLC 650

Query: 475 KSGFVLEALELF 486
             G + + + LF
Sbjct: 651 SCGRISDGIALF 662



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 209/476 (43%), Gaps = 112/476 (23%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P P+S+   LF  L   K   + L+LF   +SA   P  YTHS             H F+
Sbjct: 5   PKPLSARQ-LFKLLKAEKSPKSALALF---DSASRQPG-YTHS------------PHIFL 47

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   ILR    P  V   +         RI+E      K +   C  DV    T++    
Sbjct: 48  L---ILRRLSDPKLVVHVT---------RIVE----LIKTQKCKCTEDVVL--TVLKAYA 89

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK------------ 271
           ++     AL+ F++M    G     CKP   +YN +++   +   ++K            
Sbjct: 90  KSKMPNEALDCFQKMEEIFG-----CKPGIRSYNALLNAFIEANLLEKAESFLAYFETVG 144

Query: 272 -----------------------AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
                                  AK L   M  +++ PDV +Y +VI G   + D   A 
Sbjct: 145 ILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSAL 204

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG--VNPNTYTYNTLID 366
            +F EM ++G+ PDV+ +++++D   K G   +   + E ++ +G  V PN  TYN +I+
Sbjct: 205 EVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLV-KGSCVYPNVVTYNVMIN 263

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG--- 423
           G C   + D + +++  M+ N C  D+ +Y++LI   C   +V+ A+ +Y EM+ +    
Sbjct: 264 GLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV 323

Query: 424 -----------------IKPT--------------VVTYNTLFLGLFEIHQVERALKLFD 452
                            IK +              VV+YN    GLFE  +VE A+ +++
Sbjct: 324 DVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWE 383

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +RR    AD+ TY   I GLCK+G + +AL++ +  +D   +L+  +Y+ ++DGL
Sbjct: 384 LLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGL 439



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 6/233 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L     +    +  +  F+ + + G  P + +++ LIN  CK  R S  +  +  +L 
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
             + P+ +T++ L+ GLC   +I  A  L+ +  V   EPDV  +N L++GLC  G    
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL L+  M   N      C PN VT+NT++DGL K    + A  ++  M      PD+++
Sbjct: 588 ALLLYSNMKQSN------CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIIS 641

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           Y   ++G C     ++   LF + +  G+ P  +T+ +++  + K G +D  S
Sbjct: 642 YNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 35/157 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++++L   L + K  D  L+L++++   GL PD+  H+IL++  C  G++    ++
Sbjct: 532 PDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLL 591

Query: 165 ------------------------------LGRILRSC-----FTPNAVTFTSLIKGLCA 189
                                         +  ++ +C     F P+ +++   +KGLC+
Sbjct: 592 YSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCS 651

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
             RI +  ALF         P   T+  L+  + + G
Sbjct: 652 CGRISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 218/420 (51%), Gaps = 18/420 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
            L ++  ML+    P   ++FNIL   LAK    +   ++F  +    + PD+YT++ILI
Sbjct: 84  GLLMYKQMLKAKFVPDH-TTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILI 142

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
                +GR+     +   +      PN  T+ S++    +  R+ EA  +F +      +
Sbjct: 143 RSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQ 202

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP----NTVTYNTIIDGLCK 265
           PD  TYN LI+   +TG    A             F  V K     N VTYN+++  L +
Sbjct: 203 PDAVTYNILIDAFGKTGQLERA-------------FDFVGKSRSFTNEVTYNSLLSSLGR 249

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G +    ELF +MK + +  + +TY  +I    +A    +  +L++EM+D  ++ D+VT
Sbjct: 250 KGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVT 309

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            + ++D L K G+++ A  L + M ++G+N +T TYN LI+G     K+D A  L + ME
Sbjct: 310 INNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEME 369

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            NGC  ++++YNTLI+ Y K  ++  A  L+ EM  +G+ P VV+Y++L  G  +  + +
Sbjct: 370 ENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTD 429

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+ LF EM+      +  TYN  ID L ++G    A+E  R +RD+  ++  V+ + L+
Sbjct: 430 AAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 193/430 (44%), Gaps = 40/430 (9%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN L     +    +  L         G  P  YT+S +I  F K G V +G ++  ++L
Sbjct: 33  FNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQML 92

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           ++ F P+  TF  LI  L    ++ EA  +F         PDV+TY  LI  L   G   
Sbjct: 93  KAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRID 152

Query: 230 VALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             + LFE M A G       C+PN  TY++++      G VD+A ++F +M  + + PD 
Sbjct: 153 AVMKLFESMTAQG-------CQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDA 205

Query: 289 VTYTSVIRGFCYANDWNEA--------------------------------KRLFIEMMD 316
           VTY  +I  F        A                                  LF +M  
Sbjct: 206 VTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKA 265

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G+  + +T++++++ L   G+++   +L   M+   +  +  T N ++D      +++ 
Sbjct: 266 KGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEA 325

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A +LF  M+  G   D V+YN LIN   +   ++ A +L  EM   G  P ++TYNTL  
Sbjct: 326 AFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLIS 385

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
              +   +  A +LF EM+   VA +  +Y++ I+G  K+G    A+ LFR ++      
Sbjct: 386 SYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPP 445

Query: 497 NIVSYNCLID 506
           N V+YN LID
Sbjct: 446 NHVTYNLLID 455



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 3/259 (1%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K +T  +NT+I    +   ++KA +       E   P   TY+S+I+ F    D      
Sbjct: 27  KLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLL 86

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           ++ +M+     PD  TF++++D L K  ++++A  +   M    V+P+ YTY  LI    
Sbjct: 87  MYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLG 146

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +ID   KLF SM + GC  ++ +Y+++++ +     V+EA  ++ +M+ KG++P  V
Sbjct: 147 TIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L     +  Q+ERA   FD + ++    +  TYN+ +  L + G +   +ELF  +
Sbjct: 207 TYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQM 263

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +      N ++Y  LI+ L
Sbjct: 264 KAKGLVSNELTYAILIERL 282



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 8/191 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + + N +  CL+K    +    LF+ +   GL  D  T++ILIN   + G++     +L 
Sbjct: 307 IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLL 366

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  +   PN +T+ +LI      S +  A  LF + +     P+V +Y++LI G  + G
Sbjct: 367 EMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426

Query: 227 HTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
            T  A++LF EM A G       C PN VTYN +ID L + G    A E   +M+D    
Sbjct: 427 RTDAAISLFREMKAEG-------CPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQ 479

Query: 286 PDVVTYTSVIR 296
              VT + ++R
Sbjct: 480 MGKVTKSLLVR 490



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 97/206 (47%)

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           A  +++ +RL   M     + D   F+ ++    +   M+KA + L      G  P  YT
Sbjct: 8   ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYT 67

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y+++I  +     + +   ++  M     + D  ++N LI+   K   VEEA +++ +M 
Sbjct: 68  YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
              + P V TY  L   L  I +++  +KLF+ M       + +TY++ +     +G V 
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVD 187

Query: 481 EALELFRAIRDSKYELNIVSYNCLID 506
           EA ++F+ +     + + V+YN LID
Sbjct: 188 EACDIFQQMVQKGLQPDAVTYNILID 213



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 65/136 (47%)

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           + D  ++L  SM+ +    D   +NTLI+ Y +   +E+AL   +    +G +PT  TY+
Sbjct: 10  RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           ++     +   V+  L ++ +M +     D  T+N  ID L K+  V EA  +F  +   
Sbjct: 70  SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129

Query: 493 KYELNIVSYNCLIDGL 508
               ++ +Y  LI  L
Sbjct: 130 NVSPDVYTYTILIRSL 145


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N +   L K +       L   + S GL P+ +T+++L+  +C++G +     V
Sbjct: 246 PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKV 305

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  + R+   P   T+  L+ G C + +I EA  +  +       PDV TYNTLI+G  +
Sbjct: 306 IEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQ 365

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +    +L EEM     + GV C  N VTYN I+  +CK+G + +A     KM++  +
Sbjct: 366 WRDSSEVYSLIEEM----DKKGVKC--NAVTYNIILKWMCKKGNMTEATTTLDKMEENGL 419

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD VTY ++I  +C A    +A R+  EM  +G++ D  T + I+  LC   K+D+A  
Sbjct: 420 SPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYN 479

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL     RG   +  +Y  LI GY   +K D A  L+  M+    M   ++YN++I   C
Sbjct: 480 LLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLC 539

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +++ V++A+   +EML  G+ P   TYN +  G      VE+A +  +EM  N    D Y
Sbjct: 540 QSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVY 599

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T N  + GLC+ G + +AL+LF  +     ++++V+YN +I  L
Sbjct: 600 TCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSL 643



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 219/440 (49%), Gaps = 10/440 (2%)

Query: 71  KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
           KE   +S    + +  P+ A  IF+ M R++  P  ++  N L   L +     ++L   
Sbjct: 140 KELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTC-NTLMNSLVRYPSSSSILLAR 198

Query: 131 KRLNSA---GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           + L  +   G+ P+  + +ILI  +C   +V      + ++      P+ V++ +++  L
Sbjct: 199 QVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDAL 258

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
                + EA  L    +     P+  TYN L+ G CR G    A  + E M   N     
Sbjct: 259 LKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN----- 313

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P   TYN +++G C +G +D+A  +  +M+  N+ PDVVTY ++I G     D +E 
Sbjct: 314 -LLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEV 372

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L  EM  +GV+ + VT+++I+  +CK G M +A+  L+ M   G++P+  TYNTLI  
Sbjct: 373 YSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGA 432

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   K+  A ++   M S G   D  + NT+++  C  K ++EA +L      +G    
Sbjct: 433 YCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILD 492

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            V+Y  L LG F+  + +RAL L+DEM+   +   T TYN+ I GLC+S  V +A++   
Sbjct: 493 EVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLN 552

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + ++    +  +YN +I G
Sbjct: 553 EMLENGLVPDETTYNIIIHG 572



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 180/380 (47%), Gaps = 6/380 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L      +   D    +   +    + PD+ T++ LI+   +    S  + +
Sbjct: 316 PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSL 375

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  + +     NAVT+  ++K +C +  + EA     K       PD  TYNTLI   C+
Sbjct: 376 IEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCK 435

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  + +EM +         K +T T NTI+  LC E  +D+A  L         
Sbjct: 436 AGKMGKAFRMMDEMTSKG------LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGY 489

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V+Y  +I G+      + A  L+ EM ++ + P  +T++ ++  LC++ K+D+A  
Sbjct: 490 ILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAID 549

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M+  G+ P+  TYN +I G+CL   ++ A +    M  N    DV + N L+   C
Sbjct: 550 KLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLC 609

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   +E+AL L++ ++SKG    VVTYNT+   L +  + E A  L  EM    +  D Y
Sbjct: 610 REGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQY 669

Query: 465 TYNNFIDGLCKSGFVLEALE 484
           TY   I  L  +G + EA E
Sbjct: 670 TYKVIIAALTDAGRIKEAEE 689



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 30/444 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  I D M +M+  P  V+   ++ GC ++ +    V SL + ++  G+  +  T++I
Sbjct: 335 DEAFRIRDEMEKMNVLPDVVTYNTLIDGC-SQWRDSSEVYSLIEEMDKKGVKCNAVTYNI 393

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++   CK G ++     L ++  +  +P+ VT+ +LI   C   ++ +A  +  +     
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG 453

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D +T NT+++ LC       A NL    +    + G +   + V+Y  +I G  K+ 
Sbjct: 454 LKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS----KRGYIL--DEVSYGILILGYFKDE 507

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A  L+ +MK+  I P  +TY SVI G C +   ++A     EM++ G+ PD  T++
Sbjct: 508 KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+   C  G ++KA +    MI     P+ YT N L+ G C    ++ A KLF ++ S 
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK 627

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DVV+YNT+I+  CK    E A  L +EM +K + P   TY  +   L +  +++ A
Sbjct: 628 GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687

Query: 448 LKLFDEMRRNHVAAD-----------------------TYTYNNFIDGLCKSGFVLEALE 484
            +   +M  + +  D                       +  Y++ I+ LC      +A+ 
Sbjct: 688 EEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMH 747

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF  +      LN  +Y  L++GL
Sbjct: 748 LFVEVTKEGVALNKYTYLNLMEGL 771



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 29/390 (7%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++NI+   + K  +     +   ++   GL PD  T++ LI  +CK G++   F ++  +
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM 449

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  +  T  +++  LC E ++ EA  L           D  +Y  LI G  +    
Sbjct: 450 TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKG 509

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             ALNL++EM            P+T+TYN++I GLC+   VD+A +   +M +  + PD 
Sbjct: 510 DRALNLWDEMKERQ------IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY  +I GFC   +  +A +   EM++   +PDV T ++++  LC+ G ++KA +L   
Sbjct: 564 TTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNT 623

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++ +G + +  TYNT+I   C   K ++A  L   ME+     D  +Y  +I        
Sbjct: 624 LVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGR 683

Query: 409 VEEALSLYSEMLSKGI----------KPTVVT-------------YNTLFLGLFEIHQVE 445
           ++EA     +M+  GI             V+T             Y+     L   H+ +
Sbjct: 684 IKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYK 743

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            A+ LF E+ +  VA + YTY N ++GL K
Sbjct: 744 DAMHLFVEVTKEGVALNKYTYLNLMEGLIK 773



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 31/281 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL ++D M      P  ++ +N + G L +++  D  +     +   GL PD  T++I
Sbjct: 510 DRALNLWDEMKERQIMPSTIT-YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNI 568

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ FC  G V   F     ++ + F P+  T   L++GLC E  + +A  LF       
Sbjct: 569 IIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + DV TYNT+I+ LC+ G    A +L  EM     + G    P+  TY  II  L   G
Sbjct: 629 KDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAK--KLG----PDQYTYKVIIAALTDAG 682

Query: 268 FVDKAKELFLKMKDENINPDV-----------------------VTYTSVIRGFCYANDW 304
            + +A+E  LKM +  I  D                        + Y+  I   C  + +
Sbjct: 683 RIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKY 742

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK-MDKASR 344
            +A  LF+E+  +GV  +  T+  +M+ L K  K   KASR
Sbjct: 743 KDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 209/411 (50%), Gaps = 18/411 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           ++S N L   L K      V  ++K +    +  ++ T +I IN  C+ G+++     + 
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 224

Query: 167 RILRSCFTPNAVTFTSLIKGLC---AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
            +     +PN VT+ +L+ G C   +  ++ +A A   +       P+  T+NTLI+G C
Sbjct: 225 DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 284

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +  +   A   FEEM           KPN VTYN++I+GLC  G +++A +L+ KM    
Sbjct: 285 KDENVAAAKKAFEEMQKQG------LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P++VTY ++I GFC      EA ++F ++  Q + P+V+TF+ ++D  CK G M++  
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L   M+  G+ PN  TYN LI G C    +  A++L   ME+ G   DVV+YN LI+  
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CKN     A  L +EM + G+KP  VTYNTL  G     +++ AL +   M +     + 
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518

Query: 464 YTYNNFIDGLCK-------SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            TYN  I G CK       +G + E LE  + +  ++   +IV    L  G
Sbjct: 519 VTYNVLIKGYCKINKLEAANGLLNEMLE--KGLNPNRTTYDIVRLEMLEKG 567



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 206/402 (51%), Gaps = 11/402 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            ++L     KN         F R    G    + + + L++   K  ++     V   ++
Sbjct: 133 IDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMI 192

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR---TG 226
           +     N  TF   I GLC   ++ +A       + +   P+V TYNTL++G C+    G
Sbjct: 193 KRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAG 252

Query: 227 HTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
               A    +EM AN       +C PN VT+NT+IDG CK+  V  AK+ F +M+ + + 
Sbjct: 253 KMYKAEAFMKEMLANK------IC-PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P++VTY S+I G C      EA  L+ +M+  G++P++VT++ +++  CK   M +A+++
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + +  + + PN  T+NT+ID YC    ++    L  SM   G + +V +YN LI   C+
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            +D++ A  L +EM +KG+K  VVTYN L  GL +  +   A KL +EM    +  +  T
Sbjct: 426 KQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVT 485

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  +DG C  G +  AL +   +   + + N+V+YN LI G
Sbjct: 486 YNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 143/255 (56%), Gaps = 3/255 (1%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N ++  L KE  +   + ++ +M    I+ ++ T+   I G C A   N+A+    +M  
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 317 QGVQPDVVTFSVIMDELCKNG---KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            G+ P+VVT++ ++D  CK G   KM KA   ++ M+   + PN  T+NTLIDG+C  + 
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A+K F  M+  G   ++V+YN+LIN  C N  +EEA+ L+ +M+  G+KP +VTYN 
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +   ++ A K+FD++ +  +  +  T+N  ID  CK G + E   L  ++ D  
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 494 YELNIVSYNCLIDGL 508
              N+ +YNCLI GL
Sbjct: 409 ILPNVSTYNCLIAGL 423



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 156/324 (48%), Gaps = 22/324 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN L     K+++       F+ +   GL P+I T++ LIN  C  G++     +
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN VT+ +LI G C +  + EA  +F         P+V T+NT+I+  C+
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G      +L   M +     G++  PN  TYN +I GLC++  +  AKEL  +M+++ +
Sbjct: 391 EGMMEEGFSLCSSMLDE----GIL--PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DVVTY  +I G C  +    A++L  EM + G++P+ VT++ +MD  C  GK+  A  
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M      PN  TYN LI GYC  +K++ A  L   M   G   +  +Y+       
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI------ 558

Query: 405 KNKDVEEALSLYSEMLSKGIKPTV 428
                     +  EML KG  P +
Sbjct: 559 ----------VRLEMLEKGFSPDI 572



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 128/249 (51%), Gaps = 7/249 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ ++D M+ +   P  V+ +N L     K K       +F  ++   L P++ T + +
Sbjct: 326 EAIDLWDKMVGLGLKPNIVT-YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +CK G +  GF +   +L     PN  T+  LI GLC +  +  A  L  +      
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + DV TYN LI+GLC+   +  A  L  EM      F +  KPN VTYNT++DG C EG 
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEM------FNLGLKPNHVTYNTLMDGYCMEGK 498

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +  A  +  +M+ E   P+VVTY  +I+G+C  N    A  L  EM+++G+ P+  T+ +
Sbjct: 499 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558

Query: 329 IMDELCKNG 337
           +  E+ + G
Sbjct: 559 VRLEMLEKG 567



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 4/182 (2%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNT-YTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +D   KN K   +S    L++  G    T    + L+  Y    ++  A + F   +  G
Sbjct: 101 LDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYG 160

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               + S N L++   K   + +   +Y EM+ + I   + T+N    GL    ++ +A 
Sbjct: 161 FKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAE 220

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCK---SGFVLEALELFRAIRDSKYELNIVSYNCLI 505
              ++M+   ++ +  TYN  +DG CK   +G + +A    + +  +K   N V++N LI
Sbjct: 221 DAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLI 280

Query: 506 DG 507
           DG
Sbjct: 281 DG 282


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 188/399 (47%), Gaps = 10/399 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L     +    D  L LF+ L      PD+YTH+ L+   C   R   G  +L ++
Sbjct: 201 SYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKM 256

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
               + P    + +L+   C E +  EA  +  +       P   T   ++N  CR G  
Sbjct: 257 KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRM 316

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ +FE M          C+PN  TYN ++ G C  G V KA  L  +M++  + PDV
Sbjct: 317 SGAVRVFESMKLKG------CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY  +IRG C       A RL   M   G+  D  T++V++D LCK GK+D+A  L + 
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           + +RG+ PN+ T+NT+I+G C   K D A      M S GC  D  +Y+  I   CK K 
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
             E LS   EML K +KP+ V Y  +   LF+      A +++ +M     + D  TY  
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +   C  G + EA  +   ++     ++ ++YN LIDG
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 216/421 (51%), Gaps = 16/421 (3%)

Query: 91  LCIFDYMLRMHPSPPPVSSFNILFGCLAKN---KHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           L +F +M    P  P  +++N L   L +    +H    LSL  R   +G  PD +T + 
Sbjct: 113 LRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVR---SGWRPDAFTFNS 169

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +C+  ++     +  ++    F+ +AV++ +LI+G C   R+ EA  LF +     
Sbjct: 170 LILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE--- 226

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD++T+  L+ GLC        L + ++M     E G   +P T  Y  ++D  C+E 
Sbjct: 227 -QPDMYTHAALVKGLCDARRGEEGLYMLQKMK----ELG--WRPATRAYAALVDLWCREQ 279

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A+++  +M D  + P  VT T+V+  +C     + A R+F  M  +G +P+V T++
Sbjct: 280 KAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYN 339

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   C  GK+ KA  LL+ M   GV P+  TYN LI G C+   I+ A +L   ME N
Sbjct: 340 AMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGN 399

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D  +YN LI+  CK   V+EA SL+  +  +GI+P  VT+NT+  GL +  + + A
Sbjct: 400 GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVA 459

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               ++M     A DTYTY+ FI+ LCK+    E L     +     + + V+Y  +ID 
Sbjct: 460 CTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDR 519

Query: 508 L 508
           L
Sbjct: 520 L 520



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 11/400 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F  + +     P + +   L   L   +  +  L + +++   G  P    ++ 
Sbjct: 216 DEALELFRELEQ-----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ +C+  +      +L  +  +   P AVT T+++   C E R+  A  +F   ++  
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           CEP+V+TYN ++ G C  G    A+ L ++M     E GV  +P+ VTYN +I G C +G
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR----ECGV--EPDVVTYNLLIRGQCIDG 384

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++ A  L   M+   +  D  TY  +I   C     +EA  LF  +  +G++P+ VTF+
Sbjct: 385 HIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ LCK GK D A   LE M+  G  P+TYTY+  I+  C T            M   
Sbjct: 445 TVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK 504

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                 V+Y  +I+   K ++   A  ++ +M+S G  P VVTY T         ++  A
Sbjct: 505 DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             +  EM++  +  D   YN  IDG    G    A+ + +
Sbjct: 565 ENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILK 604



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 8/351 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L     + +  +    +   +   GL P   T + ++N +C+ GR+S    V
Sbjct: 263 PATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRV 322

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
              + L+ C  PN  T+ ++++G C   ++ +A AL  + R    EPDV TYN LI G C
Sbjct: 323 FESMKLKGC-EPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             GH   A  L   M  GNG        +  TYN +ID LCK G VD+A  LF  ++   
Sbjct: 382 IDGHIESAFRLLRLM-EGNG-----LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+ VT+ +VI G C    ++ A     +M+  G  PD  T+S  ++ LCK     +  
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             ++ M+ + V P+T  Y  +ID          A +++  M S GC  DVV+Y T +  Y
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           C    + EA ++  EM   GI    + YNTL  G   I + + A+ +   M
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 183/397 (46%), Gaps = 22/397 (5%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
            + +F+ +   G  P+++T++ ++  FC +G+V     +L ++      P+ VT+  LI+
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           G C +  I  A  L           D +TYN LI+ LC+TG    A +LF+ +     E+
Sbjct: 379 GQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGL-----EY 433

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
             + +PN+VT+NT+I+GLCK G  D A     KM      PD  TY+  I   C      
Sbjct: 434 RGI-RPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           E      EM+ + V+P  V +++++D L K      A+R+   M+  G +P+  TY T +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
             YC   ++  A  + + M+  G + D ++YNTLI+ +      + A+++   M      
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 426 PTVVTYNTLFL----------------GLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           P   T+  L                   +++  ++    +LF+ M++N V +    Y   
Sbjct: 613 PNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAI 672

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           ++G  +   + E   L   +++    LN   Y  L++
Sbjct: 673 LEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 196/446 (43%), Gaps = 23/446 (5%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG  N+    +A+ + D M R     P V ++N+L      + H ++   L + +   GL
Sbjct: 343 QGFCNVGKVYKAMALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGL 401

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             D YT+++LI+  CK G+V     +   +      PN+VTF ++I GLC   +   A  
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACT 461

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
              K     C PD +TY+  I  LC+T  +   L+  +EM   +       KP+TV Y  
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD------VKPSTVNYTI 515

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +ID L KE     A  ++ +M     +PDVVTYT+ +R +C     +EA+ + +EM   G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY--------------NTL 364
           +  D + ++ ++D     GK D A  +L+ M      PN +T+              +  
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVP 635

Query: 365 IDGYCLTDKIDHAR--KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +    +   I+ A   +LF  M+ N       +Y  ++  + + + ++E  SL S M   
Sbjct: 636 LKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKED 695

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            +      Y +L     ++     A  L   M  +    +  +Y   + G    G    A
Sbjct: 696 DLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRA 755

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
            E+FR +R  +Y  + + +  +IDGL
Sbjct: 756 KEIFRGLRWKEYNTDEIVWKIIIDGL 781



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 148/398 (37%), Gaps = 58/398 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +FD +      P  V+ FN +   L K   +D   +  +++ SAG  PD YT+S 
Sbjct: 422 DEACSLFDGLEYRGIRPNSVT-FNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   CK      G   +  +L+    P+ V +T +I  L  E     A  ++ +     
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TY T +   C  G    A N+  EM  G    G++   + + YNT+IDG    G
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG----GIIV--DAMAYNTLIDGHTSIG 594

Query: 268 FVDKAK---------------------------------------------------ELF 276
             D A                                                    ELF
Sbjct: 595 KTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELF 654

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             MK  ++      Y +++ GF      +E   L   M +  +  +   ++ +++  CK 
Sbjct: 655 ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
                A  LL  MI  G  PN  +Y  L+ G+    + D A+++F  +       D + +
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVW 774

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             +I+   +    +    + S +     KP+  TY  L
Sbjct: 775 KIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/360 (17%), Positives = 120/360 (33%), Gaps = 74/360 (20%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  +   F++  CK+ G          E L   D ML+    P  V+ + I+   L K +
Sbjct: 474 DTYTYSPFIENLCKTKGS--------REGLSFIDEMLQKDVKPSTVN-YTIVIDRLFKER 524

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFC---------------------------- 153
           +Y     ++ ++ S G  PD+ T++  +  +C                            
Sbjct: 525 NYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYN 584

Query: 154 -------KMGRVSHGFVVLGRILRSCFTPNAVTF--------------------TSLIKG 186
                   +G+  H   +L  +      PN  TF                    TS+ K 
Sbjct: 585 TLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKT 644

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           +     + +   LF   +  +       Y  ++ G           +L   M   +    
Sbjct: 645 I----ELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPL- 699

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                N   Y ++++  CK      A  L   M      P++++Y  ++ GF      + 
Sbjct: 700 -----NEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADR 754

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK +F  +  +    D + + +I+D L + G  D    ++ ++      P+  TY  L +
Sbjct: 755 AKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 221/452 (48%), Gaps = 19/452 (4%)

Query: 60  VKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPP--VSSFNILFGCL 117
           V+D  S    L   C+  G    + +    +L + D     HP+  P  VS   ++ G  
Sbjct: 80  VRDAVSYNTVLAALCRRGG----DHLRQARSL-LVDMSREAHPAARPNAVSYTTVMRGLC 134

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
           A  +  + V +L + + ++G+  D+ T+  LI   C    +     +L  +  S   PN 
Sbjct: 135 ASRRTGEAV-ALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNV 193

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           V ++ L++G C   R  +   +F        +PDV  +  LI+ LC+ G T  A  + + 
Sbjct: 194 VVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDM 253

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M     E      PN VTYN +I+ LCKEG V +A  L  +M D+ + PDVVTY ++I G
Sbjct: 254 MVQRGLE------PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAG 307

Query: 298 FCYANDWNEAKRLFIEMMDQG---VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
                + +EA   F+E M QG   V+PDVVTF+ ++  LCK G+M +A ++ E+M  RG 
Sbjct: 308 LSGVLEMDEAMS-FLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGC 366

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             N  TYN LI G+    K+  A  L   +  +G   D  +Y+ LIN + K  +V+ A  
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
               M  +GIK  +  Y  L   + +   +ERA+ LF+EM +N    D   Y+  I G C
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGAC 485

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           KSG +    +L + + D     + V+Y+ LI+
Sbjct: 486 KSGDMKTVKQLIQDMLDEGLAPDAVTYSMLIN 517



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 163/301 (54%), Gaps = 7/301 (2%)

Query: 211 DVFTYNTLINGLCRTG--HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           D  +YNT++  LCR G  H   A +L  +M+    E     +PN V+Y T++ GLC    
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSR---EAHPAARPNAVSYTTVMRGLCASRR 138

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +A  L   M+   +  DVVTY ++IRG C A++ + A  L  EM   GVQP+VV +S 
Sbjct: 139 TGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSC 198

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C++G+     ++ E M  RG+ P+   +  LID  C   K   A K+   M   G
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +VV+YN LIN  CK   V EAL+L  EM  KG+ P VVTYNTL  GL  + +++ A+
Sbjct: 259 LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAM 318

Query: 449 KLFDEMRRNH--VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              +EM +    V  D  T+N+ I GLCK G + +A+++   + +     N+V+YN LI 
Sbjct: 319 SFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIG 378

Query: 507 G 507
           G
Sbjct: 379 G 379



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 186/340 (54%), Gaps = 15/340 (4%)

Query: 176 NAVTFTSLIKGLCAES--RIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
           +AV++ +++  LC      + +A +L    ++    A  P+  +Y T++ GLC +  T  
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 231 ALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           A+ L   M A+G        + + VTY T+I GLC    +D A EL  +M    + P+VV
Sbjct: 142 AVALLRSMQASG-------VRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVV 194

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y+ ++RG+C +  W +  ++F +M  +G++PDV+ F+ ++D+LCK GK  KA+++ ++M
Sbjct: 195 VYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMM 254

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + RG+ PN  TYN LI+  C    +  A  L   M+  G   DVV+YNTLI       ++
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEM 314

Query: 410 EEALSLYSEMLSKG--IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           +EA+S   EM+     ++P VVT+N++  GL +I ++ +A+K+ + M       +  TYN
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYN 374

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             I G  +   V  A+ L   +  S  E +  +Y+ LI+G
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILING 414



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 183/400 (45%), Gaps = 38/400 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L     ++  +  V  +F+ ++  G+ PD+   + LI+  CK G+      V
Sbjct: 191 PNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKV 250

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    PN VT+  LI  LC E  + EA  L  +       PDV TYNTLI GL  
Sbjct: 251 KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSG 310

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A++  EEM  G+     V +P+ VT+N++I GLCK G + +A ++   M +   
Sbjct: 311 VLEMDEAMSFLEEMIQGD----TVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGC 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++VTY  +I GF   +    A  L  E+   G++PD  T+S++++   K  ++D+A +
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426

Query: 345 LLELMIWRGVNPNTY----------------------------------TYNTLIDGYCL 370
            L  M  RG+    +                                   Y+T+I G C 
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACK 486

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           +  +   ++L   M   G   D V+Y+ LIN Y K  D+EEA  +  +M + G  P V  
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAV 546

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +++L  G     Q ++ LKL  EMR  +VA D    +  I
Sbjct: 547 FDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 119/227 (52%), Gaps = 5/227 (2%)

Query: 287 DVVTYTSVIRGFCY--ANDWNEAKRLFIEMMDQG---VQPDVVTFSVIMDELCKNGKMDK 341
           D V+Y +V+   C    +   +A+ L ++M  +     +P+ V+++ +M  LC + +  +
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  LL  M   GV  +  TY TLI G C   ++D A +L   M  +G   +VV Y+ L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            YC++   ++   ++ +M  +GIKP V+ +  L   L +  +  +A K+ D M +  +  
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TYN  I+ LCK G V EAL L + + D     ++V+YN LI GL
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 30/217 (13%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L G   +       ++L   L  +GL PD +T+SILIN F KM  V      L  +
Sbjct: 372 TYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTM 431

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +         +  L+  +C +  +  A  LF +     C  D   Y+T+I+G C++G  
Sbjct: 432 RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDM 490

Query: 229 IVALNLFEEMANGN---------------------GEFGVVCK--------PNTVTYNTI 259
                L ++M +                        E   V K        P+   ++++
Sbjct: 491 KTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSL 550

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           I G   EG  DK  +L  +M+ +N+  D    +++IR
Sbjct: 551 IKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 215/462 (46%), Gaps = 60/462 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN+L G L  +   D    LF ++   G  P+ Y+  IL+  +C+ G  S G  +
Sbjct: 54  PETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLEL 113

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG + R  F+PN V + +LI   C E +  +A  L  + R     PDV T+N  I+ LC 
Sbjct: 114 LGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCS 173

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G  + A  +F +M     E   + +PN +TYN ++ G CKEG +++A+ LF KMK    
Sbjct: 174 SGKVLEASRIFRDMQ--IDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +  +Y   + G        EA+ +  EM+D G++P+V +++++MD LCKNG +  A  
Sbjct: 232 LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM 291

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC--------------- 389
           L+ LM   GV P+T TY TL+ GYC T K+  A  +   M  +GC               
Sbjct: 292 LMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351

Query: 390 --------------------MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK---- 425
                               + D V+ N +I+  C N  +++A+ + + M + G      
Sbjct: 352 KEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411

Query: 426 -------------------PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
                              P +++Y+T+  GL +  +V  A K F EM   ++  D+  Y
Sbjct: 412 LGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIY 471

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + FI   CK G +  A  + + +        + +YN LI GL
Sbjct: 472 DVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGL 513



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 224/478 (46%), Gaps = 66/478 (13%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNI-LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           EA  +F+ M ++  +     S+NI L G +   K  +  L L K +   G+ P++Y+++I
Sbjct: 218 EARALFEKM-KVSENLMNRESYNIWLLGLVRIGKLLEAQLVL-KEMVDMGMEPNVYSYNI 275

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK G +    +++  +  S   P+ VT+T+L+ G C   ++ EA  +  +     
Sbjct: 276 VMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDG 335

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+ +T N L+  L + G    A  L ++M     E G V   +TVT N +IDGLC  G
Sbjct: 336 CSPNNYTCNILLYSLWKEGRISEAEELLQKM----NEKGYVI--DTVTCNIVIDGLCNNG 389

Query: 268 FVDKAKEL------------------FLKMKDENIN-----PDVVTYTSVIRGFCYANDW 304
            +DKA E+                  ++ + D++ +     PD+++Y+++I G C A   
Sbjct: 390 KLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRV 449

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            EAK+ FIEMM + +QPD   + V +   CK GK+  A R+L+ M  +G N    TYN+L
Sbjct: 450 GEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSL 509

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I G    ++I     L   M   G   DV  YN +++  C+   V++A S+  EML KGI
Sbjct: 510 IMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGI 569

Query: 425 KPTVVTYNTLFLG------------LFEI----------------------HQVERALKL 450
            P + +++ L               +FEI                       +V +A +L
Sbjct: 570 SPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKEL 629

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           F+           + Y + ID LCK   + +A  +   + D  Y  +  S+  +IDGL
Sbjct: 630 FETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGL 687



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 4/262 (1%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+   YN ++    KEG VD    L   M    ++P+  T+  +I   C +   ++A+ L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F +M ++G +P+  +F +++   C+ G   K   LL  M   G +PN   YNTLI  +C 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI----KP 426
             K D A KL   M  +G   DVV++N  I+  C +  V EA  ++ +M    +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            ++TYN +  G  +   +E A  LF++M+ +    +  +YN ++ GL + G +LEA  + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
           + + D   E N+ SYN ++DGL
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGL 280



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 157/390 (40%), Gaps = 64/390 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +   M+R   SP   +  NIL   L K         L +++N  G   D  T +I
Sbjct: 322 SEANNVLREMMRDGCSPNNYTC-NILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNI 380

Query: 148 LINCFCKMGRV-----------SHGFVVLGRILRSCF------------TPNAVTFTSLI 184
           +I+  C  G++           +HG   LG +  S               P+ ++++++I
Sbjct: 381 VIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTII 440

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            GLC   R+ EA   F +      +PD   Y+  I+  C+ G    A  + ++M      
Sbjct: 441 SGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG-- 498

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C     TYN++I GL  +  + +   L  +M++  ++PDV  Y +V+   C     
Sbjct: 499 ----CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRV 554

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCK----------------------------- 335
            +A  +  EM+ +G+ P++ +FS+++   CK                             
Sbjct: 555 KDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTF 614

Query: 336 -----NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
                 G++ KA  L E  + R  +   + Y  LID  C  +K+D A  +   +   G  
Sbjct: 615 NELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYW 674

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEML 420
            D  S+  +I+   K  +  EA  L  +M+
Sbjct: 675 FDPASFMPVIDGLGKRGNKHEADELAEKMM 704



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 139/313 (44%), Gaps = 17/313 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S++ +   L K          F  +    L PD   + + I+ FCK G++S  F V
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +        T+ SLI GL ++++I E   L  + R     PDV  YN +++ LC 
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE---GFVDKAKELFLKMKD 281
            G    A ++ +EM     + G+   PN  +++ +I   CK      VD+  E+ L +  
Sbjct: 551 GGRVKDAPSVLDEML----QKGI--SPNISSFSILIKAFCKACDFSAVDEIFEIALNVCG 604

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
                  +T+  ++ G     +  +AK LF   +D+        +  ++D LCK+ K+D 
Sbjct: 605 HKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDD 660

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL---FVSMESNGCMHDVVSYNT 398
           AS +L  +I +G   +  ++  +IDG         A +L    + M S G + + V  N 
Sbjct: 661 ASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNA 720

Query: 399 LINWYC-KNKDVE 410
             +    KNKD E
Sbjct: 721 SCSIQGKKNKDGE 733


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 7/389 (1%)

Query: 121 KH-YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
           KH  D+ L +F ++   G  P+  T+S LIN  C  GRV+  F ++  ++     P A T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            T  I  LC      +A  LF   +   CEP+V+TY  LI+GLC +G   VA+ LF  M+
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
             +G F     PNTVTYN +I+ L +   +  A  +   M     +P++VTY  +I+G+C
Sbjct: 383 R-DGVF-----PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
              D  +A  +   M+ +G   ++VT++ I+   C +G    A R+L+LM   G  P+ +
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           +Y  LI G+C   K++ A  LF  M  +G   + V+Y  LI+ YCK++ ++ A SL   M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G +P V TYN L  GL + +    A +L   M    +  +  TY   IDGLCK+G  
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ALE+F  + +     N+++Y+ LI  L
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRAL 645



 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+  + R+ S G+ P++  ++ +IN  CK G V+    ++ ++  S  +P+  T+TS+I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            G C +  +  A  +F +     CEP+  TY+TLINGLC +G    A +L  EM      
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----L 313

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
            G++  P   T    I  LC  G  + A  LF+ MK++   P+V TYT++I G C +   
Sbjct: 314 HGIL--PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A  LF  M   GV P+ VT++ +++ L +N ++  A  +L LM   G +PN  TYN +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I GYC+      A  +  +M   G   ++V+YNT+I  YC + +   AL +   M   G 
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP   +Y  L  G  +I ++E A  LF+EM  + +  +  TY   IDG CK   +  A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   ++ S    N+ +YN LI GL
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGL 575



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 195/383 (50%), Gaps = 10/383 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           +S    L+ +GL   ++ +S L+    ++G  +       R+L     PN + + ++I  
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 187 LCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           LC +  + +A  +  K  VF  E  PD FTY ++I G CR      AL +F +MA     
Sbjct: 225 LCKDGNVADAETIMKK--VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-- 280

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C+PNTVTY+T+I+GLC  G V++A +L  +M    I P   T T  I   C    +
Sbjct: 281 ----CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A RLF++M ++G +P+V T++ ++  LC +G +  A  L   M   GV PNT TYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+      +I +A  +   M  NGC  ++V+YN +I  YC   D ++A+ + + ML +G 
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
              +VTYNT+  G  +      AL++ D MR      D ++Y   I G CK   +  A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           LF  + D     N V+Y  LIDG
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDG 539



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 186/386 (48%), Gaps = 6/386 (1%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           Y+    LF  + + G  P++YT++ LI+  C  G +     +  R+ R    PN VT+ +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           LI  L    RI  A  +        C P++ TYN +I G C  G    A+ +   M    
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                    N VTYNTII G C  G    A  +   M+D    PD  +YT +I GFC  +
Sbjct: 456 H------SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
               A  LF EM+D G+ P+ VT++ ++D  CK+ K+D A+ LLE M   G  PN  TYN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G    +    A +L   M   G   +VV+Y  +I+  CKN     AL ++++M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P ++TY++L   L +  +VE A  LF E+ R+ +  D  TY   I+    SG V  A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
                 +  +  +  + +Y  LI GL
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 143/339 (42%), Gaps = 23/339 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L K  ++     L K +   G+FP++ T++ +I+  CK G  S    +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN +T++SLI+ L  E ++ EA  LF +       PD  TY  +I     
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A N    M          C+P   TY  +I GL  E  +   +   L       
Sbjct: 683 SGKVEHAFNFLGRMIKAG------CQPTLWTYGVLIKGLKNEYLLADQRLAAL------- 729

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            PDVV   S    F Y     +A  +    +  +D G+   V   + ++  L   G+  +
Sbjct: 730 -PDVVPNCS----FGYQTTDQDAVSVMSAKLAELDPGLS--VQVQNALVSNLSTAGRWFE 782

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A+ LL  MI +G+ P+   YN+L+        +D A  +F  M + GC   +  Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
             C+    +EA   +  ML +   P  V    L  GL  
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 168/391 (42%), Gaps = 19/391 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L     K++  DT  SL + +  +G  P++ T+++LI+   K    S    +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PN VT+T++I GLC       A  +F K     C P++ TY++LI  L +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A NLF E+       G++  P+ +TY  +I+     G V+ A     +M     
Sbjct: 648 EGKVEEAENLFAELE----RHGLI--PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV-TFSVIMDELCKNGKMDKAS 343
            P + TY  +I+G    N++  A +    +      PDVV   S       ++     ++
Sbjct: 702 QPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCSFGYQTTDQDAVSVMSA 753

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L EL     V       N L+       +   A +L  SM S G   D  +YN+L+   
Sbjct: 754 KLAELDPGLSVQ----VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            + ++V+ A+ ++  M ++G +  +  Y  L   L ++H+ + A   F+ M       D 
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                 IDGL + G+    +E    +   +Y
Sbjct: 870 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 299 CYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGK----MDKASRLLELMIWRG 353
           C++ +       F++M+ Q G++  +  +S ++  L + G     MD+  R+L      G
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS----EG 210

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V PN   YN +I+  C    +  A  +   +  +    D  +Y ++I  +C+  D++ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++++M  +G +P  VTY+TL  GL +  +V  A  L  EM  + +    +T    I  L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C  G   +A  LF  +++   E N+ +Y  LI GL
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 6/155 (3%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   + L++     GR      +LG ++     P+   + SL+  L     +  A  +F 
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                 CE  +  Y  LI  LC+      A   FE M            P+ V    +ID
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM------LMRTWNPDDVVQAVLID 877

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           GL ++G+ D   E    M+     P    YT + R
Sbjct: 878 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  ++  M RM      V +FNI+   L K             + + G+ P++ T++ +
Sbjct: 174 KAWVLYAEMFRMRIKSS-VVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI 232

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +C  GRV    ++   +      P++ T+ S I G+C E ++ EA+ +  K +    
Sbjct: 233 IHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P   TYNTLI+G C  G+  +A +  ++M            P   TYN +I  L  +  
Sbjct: 293 RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG------LMPTVSTYNMLIHALFLDCK 346

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A  +  +M ++ + PD VTY  +I G+C   +  +A  L  EM+ +G+QP  VT++ 
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  L K G+M +A  L E ++ +G+ P+   +N LIDG+C    +D A  +   M+   
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D V++NTL+   C+   VE A  L  EM S+GIKP  ++YNTL  G  +   ++ A 
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAF 526

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ DEM          TYN  I GLCK+     A +L + +       N  +Y  LI+G+
Sbjct: 527 RVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 199/398 (50%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +++L     + K  D     F  +   G+ P ++  + +++ F K  R    +V+   + 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R     + VTF  +I  LC E ++ +A            +P+V TYNT+I+G C  G   
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +F+ M           KP++ TY + I G+CKEG +++A  +  KMK+  + P  V
Sbjct: 244 GARMIFDLMKCRG------VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I G+C   +   A     +M+ +G+ P V T+++++  L  + KMD+A  +++ M
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ P++ TYN LI+GYC    +  A  L   M S G     V+Y +LI    K   +
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A  L+ +++ KGI P ++ +N L  G      ++RA  +  EM +  V  D  T+N  
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C+ G V  A EL   ++    + + +SYN LI G
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG 515



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 136/274 (49%), Gaps = 3/274 (1%)

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           +F E+    G  G+      V Y+ +I   C+    D A E F  MK + + P V     
Sbjct: 105 VFNELGVARGVLGI---KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACND 161

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++  F  +N   +A  L+ EM    ++  VVTF+++++ LCK GK+ KA   + LM   G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           + PN  TYNT+I GYC   +++ AR +F  M+  G   D  +Y + I+  CK   +EEA 
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS 281

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            +  +M   G++PT VTYNTL  G      +E A    D+M R  +     TYN  I  L
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                + EA  + + + +     + V+YN LI+G
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 2/164 (1%)

Query: 347 ELMIWRGV-NPNTYT-YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           EL + RGV    TY  Y+ LI   C   + D A + F  M+  G +  V + N +++ + 
Sbjct: 108 ELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFL 167

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+   E+A  LY+EM    IK +VVT+N +   L +  ++++A +    M    +  +  
Sbjct: 168 KSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVV 227

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I G C  G V  A  +F  ++    + +  +Y   I G+
Sbjct: 228 TYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGM 271


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 204/396 (51%), Gaps = 10/396 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F   LR  P+ P   + N +   L K +       LF  +   GL P + T++ 
Sbjct: 136 DEALYVFRR-LRTLPALP---ACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNT 191

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN     G V+    V  +++     PN VT+T++I  LC E  I +A  LF   +   
Sbjct: 192 LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAG 251

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+ +TYN L++G C+      A+ L++E+            PN V + T+IDG CK  
Sbjct: 252 MQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG------LNPNAVIFTTLIDGFCKAK 305

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +AK +FL+M    + P V  Y S++ G   + +  EA  L+ EM   G+ PD  T S
Sbjct: 306 RFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCS 365

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  LC  G+M  A R L+ +   GVN N   YN LID YC    ++ A      M   
Sbjct: 366 IVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEV 425

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VVSY++LI+ + K   ++ A+++Y+EM++KGI+P VVTY  L  G  +   ++ A
Sbjct: 426 GIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAA 485

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +L  EM  N ++ +  T +  +DGLC+   V EA+
Sbjct: 486 FRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 207/428 (48%), Gaps = 33/428 (7%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D M+     P  V ++  +   L +         LF  +  AG+ P+ YT+++L++  
Sbjct: 208 VWDQMVAQQIDPN-VVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGH 266

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+   V+   V+   +L+S   PNAV FT+LI G C   R  EA  +F +   F   P V
Sbjct: 267 CQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTV 326

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN+L++G  R+G+   AL L++EM       G+   P+  T + ++ GLC  G +  A
Sbjct: 327 PVYNSLMDGAFRSGNAQEALALYQEMT----RLGLC--PDEFTCSIVVRGLCDGGQMHVA 380

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
                 ++++ +N +   Y ++I  +C   +  EA      M + G++P+VV++S ++D 
Sbjct: 381 DRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDG 440

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
             K GKM  A  +   M+ +G+ PN  TY  LI G+     ID A +L   M  NG   +
Sbjct: 441 HSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPN 500

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-------------------PTVVTYNT 433
            ++ + L++  C+   V+EA+    E    G+K                   P  V Y T
Sbjct: 501 AITVSVLVDGLCRENRVQEAVRFVMEY--SGLKCSDIHSVFSNFTIEEECLIPNSVIYMT 558

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR-----A 488
           L  GL+   Q   A KLF  MR++ +  D++TY   I G C  G+VL A+ L+       
Sbjct: 559 LIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIG 618

Query: 489 IRDSKYEL 496
           ++ ++Y++
Sbjct: 619 VKPTRYKI 626



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 208/406 (51%), Gaps = 9/406 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S  P  +  +L   L++    D  L +F+RL +    P +   + +++   K  R    +
Sbjct: 115 STTPAPALGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAW 171

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +LR    P+ VT+ +LI     +  + +A  ++ +      +P+V TY T+I  L
Sbjct: 172 ELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICAL 231

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C  G    A  LF+ M     E G+  +PN  TYN ++ G C+   V+ A  L+ ++   
Sbjct: 232 CEEGCIGDAERLFDAMK----EAGM--QPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKS 285

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +NP+ V +T++I GFC A  ++EAK +F+EM   GV P V  ++ +MD   ++G   +A
Sbjct: 286 GLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEA 345

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L + M   G+ P+ +T + ++ G C   ++  A +    ++ +G   +  +YN LI+ 
Sbjct: 346 LALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDE 405

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YC+  ++EEAL+  + M   GI+P VV+Y++L  G  +  +++ A+ ++ EM    +  +
Sbjct: 406 YCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPN 465

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY   I G  K+G +  A  L + + ++    N ++ + L+DGL
Sbjct: 466 VVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGL 511



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 207/441 (46%), Gaps = 45/441 (10%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLS----------------LFKRLNSAGLFPDIYTH 145
           P PPP +S  +LF     N  +  + S                   R  +AGL   ++  
Sbjct: 10  PMPPPSTSVRLLFSRRRPNAPHHHLCSRHSLSASGPAAAAAIAPSSRNRAAGLAAAVHG- 68

Query: 146 SILINCFCKMGRVSHGFVVLGR-------------------ILRSCFTPNAVTFTSLIKG 186
           ++    F +  R++   V + R                    L S  T  A     L+  
Sbjct: 69  TVAAKNFAQAIRLTKSLVQVSRSFPGRSSAATAAGAGAAFTALSSTSTTPAPALGVLVIA 128

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           L     + EA  +F + R     P +   N +++GL +      A  LF+EM       G
Sbjct: 129 LSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEML----RRG 181

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
           +V  P+ VTYNT+I+    +G V KA+E++ +M  + I+P+VVTYT++I   C      +
Sbjct: 182 LV--PSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGD 239

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+RLF  M + G+QP+  T++V+M   C+   ++ A  L + ++  G+NPN   + TLID
Sbjct: 240 AERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLID 299

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C   +   A+ +F+ M   G    V  YN+L++   ++ + +EAL+LY EM   G+ P
Sbjct: 300 GFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCP 359

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              T + +  GL +  Q+  A +    ++ + V  +   YN  ID  C+ G + EAL   
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATC 419

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             + +   E N+VSY+ LIDG
Sbjct: 420 TRMTEVGIEPNVVSYSSLIDG 440



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 24/289 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL ++  M R+   P   +   ++ G L             + +   G+  +   ++ 
Sbjct: 343 QEALALYQEMTRLGLCPDEFTCSIVVRG-LCDGGQMHVADRFLQGVQEDGVNLNAAAYNA 401

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ +C++G +        R+      PN V+++SLI G     ++  A A++T+     
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP+V TY  LI+G  + G    A  L +EM     E G+   PN +T + ++DGLC+E 
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI----ENGI--SPNAITVSVLVDGLCREN 515

Query: 268 FVDKAKELFLK-----------------MKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            V +A    ++                 +++E + P+ V Y ++I G        EA +L
Sbjct: 516 RVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKL 575

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
           F  M   G+ PD  T+++++   C  G +  A  L   M+  GV P  Y
Sbjct: 576 FSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  + D M      P  V   N++ G + +  + D    + K + +AG+ P+  T+  
Sbjct: 309 NEAKALLDEMSCAELKPNVVVYANLIDGFM-REGNADEAFKMIKEMVAAGVQPNKITYDN 367

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CKMG++    ++L +++R    P+ +T+  +I+G        +A  L ++     
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V+TY+ +I+GLC++G    A +L EEM           KPN   Y  +I G C+EG
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREG 481

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+F KM   N+ PD+  Y S+I G        E+ + F +M ++G+ P+  T+S
Sbjct: 482 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 541

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++    KNG ++ A +L++ M+  G+ PN   Y  L++ Y  +D I+     F SM   
Sbjct: 542 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 601

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G M D   Y  LI+    + ++E A  + S +   G  P V  Y++L  GL +    E+A
Sbjct: 602 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKA 661

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             + DEM +  V  +   YN  IDGLCKSG +  A  +F +I       N V+Y  LIDG
Sbjct: 662 FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 721



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 203/460 (44%), Gaps = 76/460 (16%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           K + +DT   +   +   G   +  T+++LI   C+ G V   F     +      P+  
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+ +LI GLC   R  EA AL  +      +P+V  Y  LI+G  R G+   A  + +EM
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      +PN +TY+ ++ GLCK G +D+A  L  +M  ++  PD +TY  +I G 
Sbjct: 354 VAAG------VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
              +   +A RL  EM + G+ P+V T+S+++  LC++G+ +KAS LLE M  +G+ PN 
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 359 YTYNTLIDGYC--------------------LTD---------------KIDHARKLFVS 383
           + Y  LI GYC                    L D               +++ + K F  
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  G + +  +Y+ LI+ Y KN D+E A  L   ML  G+KP  V Y  L    F+   
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 444 VER-----------------------------------ALKLFDEMRRNHVAADTYTYNN 468
           +E+                                   A ++   + +N    D + Y++
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I GLCK+    +A  +   +     + NIV YN LIDGL
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 687



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 204/440 (46%), Gaps = 44/440 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N++     ++        L   + +AG+ P++YT+SI+I+  C+ G       +
Sbjct: 395 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 454

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNA  +  LI G C E  +  A  +F K       PD++ YN+LI GL +
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    +   F +M     E G++  PN  TY+ +I G  K G ++ A++L  +M D  +
Sbjct: 515 VGRVEESTKYFAQMQ----ERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V Y  ++  +  ++D  +    F  M+DQGV  D   + +++  L  +G M+ A R
Sbjct: 569 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLT--------------------------------- 371
           +L  +   G  P+ + Y++LI G C T                                 
Sbjct: 629 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 688

Query: 372 --DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I +AR +F S+ + G + + V+Y +LI+  CK  D+  A  LY+EML+ GI P   
Sbjct: 689 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            Y+ L  G      +E+A+ L +EM  R H  A   ++NN +DG CK G + E L+L   
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHV 806

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I       N ++   +I GL
Sbjct: 807 IMGRGLVPNALTIENIISGL 826



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 174/326 (53%), Gaps = 6/326 (1%)

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           S ++  C       A  +  + R   C  +  TYN LI GLCR+G    A    ++M   
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME-- 284

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
             ++G+V  P+  TY  +I+GLCK    ++AK L  +M    + P+VV Y ++I GF   
Sbjct: 285 --DYGLV--PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 340

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
            + +EA ++  EM+  GVQP+ +T+  ++  LCK G+MD+AS LL+ M+     P+T TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N +I+G+        A +L   ME+ G   +V +Y+ +I+  C++ + E+A  L  EM +
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           KG+KP    Y  L  G      V  A ++FD+M + +V  D Y YN+ I GL K G V E
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDG 507
           + + F  +++     N  +Y+ LI G
Sbjct: 521 STKYFAQMQERGLLPNEFTYSGLIHG 546



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 210/452 (46%), Gaps = 65/452 (14%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IFD M +++  P      +++FG L+K    +     F ++   GL P+ +T+S LI+ +
Sbjct: 489 IFDKMTKVNVLPDLYCYNSLIFG-LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI---------------------KGLCAES 191
            K G +     ++ R+L +   PN V +  L+                     +G+  ++
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 607

Query: 192 RI-------------MEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           RI             MEAA  + +        PDV  Y++LI+GLC+T     A  + +E
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M+           PN V YN +IDGLCK G +  A+ +F  +  + + P+ VTYTS+I G
Sbjct: 668 MSKKG------VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 721

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C   D + A  L+ EM+  G+ PD   +SV+       G +++A  L+E M  RG + +
Sbjct: 722 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HAS 780

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             ++N L+DG+C   K+    KL   +   G + + ++   +I+   +   + E  +++ 
Sbjct: 781 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 840

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH---------------VAAD 462
           E+  K  +     +++LF+ +  I+Q +  L + D+M R+H               + A 
Sbjct: 841 ELQQKTSESAARHFSSLFMDM--INQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 898

Query: 463 TY-----TYNNFIDGLCKSGFVLEALELFRAI 489
           +      +Y   +D LC+ G + EAL L + +
Sbjct: 899 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 151/360 (41%), Gaps = 28/360 (7%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVA- 231
            P    F  L   LCA S    A  L  K  R +   P V    ++   L  +GH     
Sbjct: 119 APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLA--SIHRALSDSGHPFAGG 176

Query: 232 ----LNLFEEMANGNGEFG--------------------VVCKPNTVTYNTIIDGLCKEG 267
                   +E+  G G  G                    V        + + ++  CK  
Sbjct: 177 ARRPRGYLQEVWEGAGRRGGRPDDERSGHGSQHSVLQRAVEGSAARGRHGSALEAYCKVR 236

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D AK++ ++M++     + VTY  +I G C +    EA     +M D G+ PD  T+ 
Sbjct: 237 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG 296

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ LCK+ + ++A  LL+ M    + PN   Y  LIDG+      D A K+   M + 
Sbjct: 297 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 356

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + ++Y+ L+   CK   ++ A  L  +M+    +P  +TYN +  G F  H  + A
Sbjct: 357 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDA 416

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L  EM    ++ + YTY+  I GLC+SG   +A +L   +     + N   Y  LI G
Sbjct: 417 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 476



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 121/218 (55%)

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           + S +  +C   +++ AK++ +EM ++G   + VT++V++  LC++G +++A    + M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G+ P+ +TY  LI+G C + + + A+ L   M       +VV Y  LI+ + +  + +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA  +  EM++ G++P  +TY+ L  GL ++ Q++RA  L  +M R+    DT TYN  I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G  +     +A  L   + ++    N+ +Y+ +I GL
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 442



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 138/327 (42%), Gaps = 29/327 (8%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V  ++ L   L K    +    +   ++  G+ P+I  ++ LI+  CK G +S+  
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   IL     PN VT+TSLI G C    I  A  L+ +       PD F Y+ L  G 
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757

Query: 223 CRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
              G    A+ L EEM   G+            ++N ++DG CK G + +  +L   +  
Sbjct: 758 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 809

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIE-------------------MMDQGVQPD 322
             + P+ +T  ++I G   A   +E   +F+E                   M++QG  P 
Sbjct: 810 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            V   +I D  CK G +DKA  L ++++ +       +Y  ++D  C   K+  A  L  
Sbjct: 870 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 928

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDV 409
            M+  G +   +     I W+ ++  +
Sbjct: 929 EMDKRGNLQPTLVALLGIFWFRRHHHI 955


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 7/389 (1%)

Query: 121 KH-YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
           KH  D+ L +F ++   G  P+  T+S LIN  C  GRV+  F ++  ++     P A T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            T  I  LC      +A  LF   +   CEP+V+TY  LI+GLC +G   VA+ LF  M+
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
             +G F     PNTVTYN +I+ L +   +  A  +   M     +P++VTY  +I+G+C
Sbjct: 383 R-DGVF-----PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
              D  +A  +   M+ +G   ++VT++ I+   C +G    A R+L+LM   G  P+ +
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           +Y  LI G+C   K++ A  LF  M  +G   + V+Y  LI+ YCK++ ++ A SL   M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
              G +P V TYN L  GL + +    A +L   M    +  +  TY   IDGLCK+G  
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ALE+F  + +     N+++Y+ LI  L
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRAL 645



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+  + R+ S G+ P++  ++ +IN  CK G V+    ++ ++  S  +P+  T+TS+I
Sbjct: 198 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 257

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            G C +  +  A  +F +     CEP+  TY+TLINGLC +G    A +L  EM      
Sbjct: 258 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----L 313

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
            G++  P   T    I  LC  G  + A  LF+ MK++   P+V TYT++I G C +   
Sbjct: 314 HGIL--PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGIL 371

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A  LF  M   GV P+ VT++ +++ L +N ++  A  +L LM   G +PN  TYN +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I GYC+      A  +  +M   G   ++V+YNT+I  YC + +   AL +   M   G 
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP   +Y  L  G  +I ++E A  LF+EM  + +  +  TY   IDG CK   +  A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   ++ S    N+ +YN LI GL
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGL 575



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 195/383 (50%), Gaps = 10/383 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           +S    L+ +GL   ++ +S L+    ++G  +       R+L     PN + + ++I  
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 187 LCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           LC +  + +A  +  K  VF  E  PD FTY ++I G CR      AL +F +MA     
Sbjct: 225 LCKDGNVADAETIMKK--VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-- 280

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C+PNTVTY+T+I+GLC  G V++A +L  +M    I P   T T  I   C    +
Sbjct: 281 ----CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A RLF++M ++G +P+V T++ ++  LC +G +  A  L   M   GV PNT TYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+      +I +A  +   M  NGC  ++V+YN +I  YC   D ++A+ + + ML +G 
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
              +VTYNT+  G  +      AL++ D MR      D ++Y   I G CK   +  A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           LF  + D     N V+Y  LIDG
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDG 539



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 186/386 (48%), Gaps = 6/386 (1%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           Y+    LF  + + G  P++YT++ LI+  C  G +     +  R+ R    PN VT+ +
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           LI  L    RI  A  +        C P++ TYN +I G C  G    A+ +   M    
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                    N VTYNTII G C  G    A  +   M+D    PD  +YT +I GFC  +
Sbjct: 456 H------SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
               A  LF EM+D G+ P+ VT++ ++D  CK+ K+D A+ LLE M   G  PN  TYN
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G    +    A +L   M   G   +VV+Y  +I+  CKN     AL ++++M+ +
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P ++TY++L   L +  +VE A  LF E+ R+ +  D  TY   I+    SG V  A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
                 +  +  +  + +Y  LI GL
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 143/339 (42%), Gaps = 23/339 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L K  ++     L K +   G+FP++ T++ +I+  CK G  S    +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN +T++SLI+ L  E ++ EA  LF +       PD  TY  +I     
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A N    M          C+P   TY  +I GL  E  +   +   L       
Sbjct: 683 SGKVEHAFNFLGRMIKAG------CQPTLWTYGVLIKGLKNEYLLADQRLAAL------- 729

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            PDVV   S    F Y     +A  +    +  +D G+   V   + ++  L   G+  +
Sbjct: 730 -PDVVPNCS----FGYQTTDQDAVSVMSAKLAELDPGLS--VQVQNALVSNLSTAGRWFE 782

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A+ LL  MI +G+ P+   YN+L+        +D A  +F  M + GC   +  Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
             C+    +EA   +  ML +   P  V    L  GL  
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 168/391 (42%), Gaps = 19/391 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L     K++  DT  SL + +  +G  P++ T+++LI+   K    S    +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++     PN VT+T++I GLC       A  +F K     C P++ TY++LI  L +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A NLF E+       G++  P+ +TY  +I+     G V+ A     +M     
Sbjct: 648 EGKVEEAENLFAELE----RHGLI--PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV-TFSVIMDELCKNGKMDKAS 343
            P + TY  +I+G    N++  A +    +      PDVV   S       ++     ++
Sbjct: 702 QPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCSFGYQTTDQDAVSVMSA 753

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L EL     V       N L+       +   A +L  SM S G   D  +YN+L+   
Sbjct: 754 KLAELDPGLSVQ----VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            + ++V+ A+ ++  M ++G +  +  Y  L   L ++H+ + A   F+ M       D 
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                 IDGL + G+    +E    +   +Y
Sbjct: 870 VVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 299 CYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGK----MDKASRLLELMIWRG 353
           C++ +       F++M+ Q G++  +  +S ++  L + G     MD+  R+L      G
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS----EG 210

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V PN   YN +I+  C    +  A  +   +  +    D  +Y ++I  +C+  D++ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++++M  +G +P  VTY+TL  GL +  +V  A  L  EM  + +    +T    I  L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C  G   +A  LF  +++   E N+ +Y  LI GL
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 6/155 (3%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   + L++     GR      +LG ++     P+   + SL+  L     +  A  +F 
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                 CE  +  Y  LI  LC+      A   FE M            P+ V    +ID
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM------LMRTWNPDDVVQAVLID 877

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           GL ++G+ D   E    M+     P    YT + R
Sbjct: 878 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 203/409 (49%), Gaps = 6/409 (1%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           RM  S   V  +N+L   L KNK     + +   L   GL     T+  L+   CK+   
Sbjct: 253 RMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
             G  V+  ++   F P     +SL++GL  + ++++A  L  + +     P +F YN L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           IN LC+ G    A  LF+EM    GE G+    N VTY+ +ID  C+ G +D A     K
Sbjct: 373 INSLCKDGKFDEAELLFKEM----GEKGLC--ANDVTYSILIDSFCRRGKLDTAIHFLGK 426

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M    I   V  Y S+I G C   + + A   F EM+D+G++P VV+++ ++   C  GK
Sbjct: 427 MIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGK 486

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + +A RL   M  +G+ PNTYT+ TLI      +++  A +LF  M     M + V+YN 
Sbjct: 487 LHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I  +CK  +  +A  L ++M+ KG+ P   TY  L   L    +V  A K  D++ R H
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +   Y+  + G CK G + +AL + R +     ++++V Y  LIDG
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDG 655



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 202/412 (49%), Gaps = 8/412 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ++R     P V +   +   LAK +  D VL LF  + S G+ PDIY +  +I  FC++ 
Sbjct: 183 LMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELK 242

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
             +    ++ R+  S    N V +  LI GLC   R+ EA  +              TY 
Sbjct: 243 NFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYC 300

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TL+ GLC+     V   + +EM     E G V  P     +++++GL ++G V  A +L 
Sbjct: 301 TLVLGLCKVQEFEVGAGVMDEMI----ELGFV--PTEAALSSLVEGLRRKGKVVDAFDLV 354

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            ++K     P +  Y ++I   C    ++EA+ LF EM ++G+  + VT+S+++D  C+ 
Sbjct: 355 NRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRR 414

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           GK+D A   L  MI  G+    Y YN+LI+G+C    +  A   F  M   G    VVSY
Sbjct: 415 GKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSY 474

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            +LI+ YC    + EA  LY EM  KGI P   T+ TL   LF  +++  A +LFDEM  
Sbjct: 475 TSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLE 534

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++  +  TYN  I+G CK G  ++A EL   +       +  +Y  LI  L
Sbjct: 535 QNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 203/416 (48%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+ +   P   +  +++ G   K K  D    L  R+   G  P ++ ++ LIN  
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDA-FDLVNRVKKVGAMPSLFVYNALINSL 376

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G+     ++   +       N VT++ LI   C   ++  A     K  +   +  V
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           + YN+LING C+ G+   A++ F+EM +         KP  V+Y ++I G C +G + +A
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKG------LKPTVVSYTSLISGYCNKGKLHEA 490

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L+ +M  + I P+  T+T++I     AN   +A RLF EM++Q + P+ VT++V+++ 
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G   KA  LL  M+ +G+ P+TYTY  LI   C T ++  A+K    +       +
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + Y+ L++ YCK   + +AL +  EM+ +G+   +V Y  L  G  +         L  
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M    +  D   Y + IDG  K+G V +A  ++  + D     NIV+Y  LI+ L
Sbjct: 671 NMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINEL 726



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 193/384 (50%), Gaps = 8/384 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +FD ML  +  P  V+ +N++     K  +      L  ++   GL PD YT+  L
Sbjct: 524 DAFRLFDEMLEQNMMPNEVT-YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  GRV      +  + R  F  N + +++L+ G C E R+ +A  +  +      
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D+  Y  LI+G  +   T     L + M +         +P+ V Y ++IDG  K G 
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR------LRPDKVIYTSMIDGYSKAGS 696

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V KA  ++  M DE   P++VTYT++I   C A   ++A+ L+ EM+     P+ VT+  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L + G M+KA +L   M+ +G+  NT +YN L+ G+C   +++ A KL   M  N 
Sbjct: 757 FLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA 815

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D ++Y+T+I   C+  +++ A+  +  ML+KG+KP  + YN L  G     ++ +A 
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAF 875

Query: 449 KLFDEMRRNHVAADTYTYNNFIDG 472
           +L D+M R  V  +  T+ +   G
Sbjct: 876 ELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 207/428 (48%), Gaps = 8/428 (1%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G   L   + A+  FD M+     P  VS  +++ G   K K ++    L+  +   G+ 
Sbjct: 445 GHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA-FRLYHEMTGKGIA 503

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+ YT + LI+   +  R++  F +   +L     PN VT+  +I+G C E   ++A  L
Sbjct: 504 PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +       PD +TY  LI+ LC TG    A    +++   + +   +C      Y+ +
Sbjct: 564 LNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMC------YSAL 617

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           + G CKEG +  A  +  +M    ++ D+V Y  +I G     D +    L   M DQ +
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +PD V ++ ++D   K G + KA  + ++MI  G  PN  TY TLI+  C    +D A  
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L+  M  +    + V+Y   ++   +   +E+A+ L+++ML KG+    V+YN L  G  
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFC 796

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           ++ +VE A KL DEM  N +  D  TY+  I   C+ G +  A+E +  + +   + + +
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856

Query: 500 SYNCLIDG 507
           +YN LI G
Sbjct: 857 AYNFLIYG 864



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 192/399 (48%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++IL     +    DT +    ++  AG+   +Y ++ LIN  CK+G +S        +
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P  V++TSLI G C + ++ EA  L+ +       P+ +T+ TLI+ L R    
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  LF+EM   N        PN VTYN +I+G CKEG   KA EL  +M  + + PD 
Sbjct: 523 TDAFRLFDEMLEQN------MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDT 576

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY  +I   C      EAK+   ++  +  + + + +S ++   CK G++  A  +   
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCRE 636

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ RGV+ +   Y  LIDG            L  +M       D V Y ++I+ Y K   
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS 696

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V++A  ++  M+ +G  P +VTY TL   L +   +++A  L+ EM  ++   +  TY  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           F+D L + G + +A++L   +       N VSYN L+ G
Sbjct: 757 FLDHLAREGSMEKAVQLHNDMLKGLLA-NTVSYNILVRG 794



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 192/404 (47%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L K+  +D    LFK +   GL  +  T+SILI+ FC+ G++      
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHF 423

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG+++ +        + SLI G C    +  A + F +      +P V +Y +LI+G C 
Sbjct: 424 LGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCN 483

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L+ EM  G G       PNT T+ T+I  L +   +  A  LF +M ++N+
Sbjct: 484 KGKLHEAFRLYHEMT-GKG-----IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM 537

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY  +I G C   +  +A  L  +M+ +G+ PD  T+  ++  LC  G++ +A +
Sbjct: 538 MPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKK 597

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            ++ +       N   Y+ L+ GYC   ++  A  +   M   G   D+V Y  LI+   
Sbjct: 598 FIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTI 657

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +D      L   M  + ++P  V Y ++  G  +   V++A  ++D M       +  
Sbjct: 658 KEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIV 717

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   I+ LCK+G + +A  L++ +  S    N V+Y C +D L
Sbjct: 718 TYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL 761



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 174/408 (42%), Gaps = 62/408 (15%)

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F  L      C   +++ F  LI+    E R+ ++  +F   R     P V T   ++NG
Sbjct: 143 FEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNG 202

Query: 222 LCRTGHTIVALNLFEEMANGN---------------GEFGVVCKP------------NTV 254
           L +     + L LF E+ +                  E     K             N V
Sbjct: 203 LAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVV 262

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YN +I GLCK   V +A E+   +  + +    VTY +++ G C   ++     +  EM
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322

Query: 315 MDQG-----------------------------------VQPDVVTFSVIMDELCKNGKM 339
           ++ G                                     P +  ++ +++ LCK+GK 
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D+A  L + M  +G+  N  TY+ LID +C   K+D A      M   G    V  YN+L
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           IN +CK  ++  A+S + EM+ KG+KPTVV+Y +L  G     ++  A +L+ EM    +
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A +TYT+   I  L ++  + +A  LF  + +     N V+YN +I+G
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 196/379 (51%), Gaps = 6/379 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF  +   G     +T++ L++  C  G V     V   +      P+   + +++ GLC
Sbjct: 129 LFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLC 188

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R  EA  L +       EP+V  YN LI+G C  G   +A+++FE M + NG     
Sbjct: 189 GAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM-DVNG----- 242

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C PN  TY  +I G CK   +D+A  LF +M D  + P+VVTYT++I+G C     + A 
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           RL   M + G+ P+  T SV++D LCK+ ++ +A  LL  +I +G+  N   Y +LIDG 
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   +   A +L  ++ S G + D  +Y++LI+  C+ K++ EA+ +  +M+ KG++P+ 
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSP 422

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY  +   L      + + K+ D+M    +  D +TY  F+   C  G + +A  +   
Sbjct: 423 VTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLH 482

Query: 489 IRDSKYELNIVSYNCLIDG 507
           + D     N+V+YN LI G
Sbjct: 483 MVDHGVCPNLVTYNALICG 501



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 197/400 (49%), Gaps = 12/400 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            N     LA+++    + S   R+ +  L     T++ LIN +C  G +      L  +L
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNL----RTYTTLINAYCLAGDLPASKRHLSSLL 99

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R+ F P++  +TS + G C    +  A  LF    +  C    FTY  L++GLC  G   
Sbjct: 100 RAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVR 159

Query: 230 VALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
            A+++F  M A+G       C P+   Y T++ GLC  G   +A+ L      E   P+V
Sbjct: 160 EAMSVFAGMQADG-------CAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNV 212

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V Y ++I G+C   D   A  +F  M   G  P+V T++ ++   CK+ K+D+A  L   
Sbjct: 213 VVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSR 272

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G+ PN  TY  LI G C   ++D A +L  SME++G + +  + + LI+  CK++ 
Sbjct: 273 MVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHER 332

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V EA  L   ++ KGIK   + Y +L  GL +  +   A +L   +       D +TY++
Sbjct: 333 VGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSS 392

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            IDGLC+   + EA+ +   + +   + + V+Y  +ID L
Sbjct: 393 LIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 196/394 (49%), Gaps = 22/394 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L          +  + +F+R++  G  P++ T++ LI+ FCK  ++    ++
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++ +   PN VT+T+LI+G C++ ++  A  L          P+ +T + LI+ LC+
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L   +     + G+  K N + Y ++IDGLCK G    A  L   +  +  
Sbjct: 330 HERVGEAQLLLGSLI----QKGI--KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY+S+I G C   + +EA  +  +MM++GVQP  VT+++I+DEL +    D + +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ MI  G+ P+ +TY   +  YC   +++ A  + + M  +G   ++V+YN LI  Y 
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLF----------------LGLFEIHQVERAL 448
                 +A S +  M++ G KP   +Y  L                 + +++I +++   
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            L +EM +  + ++   YN F+  LC+   + EA
Sbjct: 564 GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 182/380 (47%), Gaps = 6/380 (1%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
            +S+F  + + G  PD + ++ +++  C  GR      +L   +   F PN V + +LI 
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           G C    +  A  +F +  V  C P+V TY  LI+G C++     A+ LF  M +     
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA---- 276

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           G+V  PN VTY  +I G C +G +D A  L   M++  + P+  T + +I   C      
Sbjct: 277 GLV--PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA+ L   ++ +G++ + + ++ ++D LCK G+   A RL++ ++ +G  P+ +TY++LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DG C   ++  A  +   M   G     V+Y  +I+   +    + +  +  +M++ GIK
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P V TY           ++E A  +   M  + V  +  TYN  I G    G   +A   
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 486 FRAIRDSKYELNIVSYNCLI 505
           F+ +  +  + N  SY  L+
Sbjct: 515 FKHMVANGCKPNEESYTVLL 534



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 191/441 (43%), Gaps = 57/441 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L      +   D    L + + ++GL P+ +T S+LI+  CK  RV    ++
Sbjct: 280 PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLL 339

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG +++     N + +TSLI GLC   R   A  L          PD  TY++LI+GLCR
Sbjct: 340 LGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR 399

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ + ++M     E GV  +P+ VTY  IID L +E   D +K++  KM    I
Sbjct: 400 QKELSEAMLVLDDMM----EKGV--QPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV TYT  +R +C+     +A+ + + M+D GV P++VT++ ++      G   +A  
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFS 513

Query: 345 LLELMIWRGVNPNTYTYNTL---------------------------------------- 364
             + M+  G  PN  +Y  L                                        
Sbjct: 514 TFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQ 573

Query: 365 ----IDGY-------CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
               ID Y       C  D++D A+ L + M+S         Y ++I   C+ K + EAL
Sbjct: 574 LPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEAL 633

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           +    M+  G  P + +Y  +   L E   ++ A ++F +M       +   +   IDGL
Sbjct: 634 TFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGL 693

Query: 474 CKSGFVLEALELFRAIRDSKY 494
            + G+V E   L   + +  Y
Sbjct: 694 LQKGYVAECSSLLSVMEEKNY 714



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 141/376 (37%), Gaps = 57/376 (15%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  L   L K   +     L + L S G  PD +T+S LI+  C+   +S   +VL  ++
Sbjct: 355 YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMM 414

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+ VT+T +I  L  E     +  +  K      +PDVFTY   +   C  G   
Sbjct: 415 EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A ++   M +       VC PN VTYN +I G    G   +A   F  M      P+  
Sbjct: 475 DAEHMMLHMVDHG-----VC-PNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEE 528

Query: 290 TYTSVIR---------------------------------------------------GF 298
           +YT ++R                                                     
Sbjct: 529 SYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSL 588

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  +  +EAK L IEM    + P    ++ I+   C+   + +A   ++ M+  G  P  
Sbjct: 589 CRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQL 648

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            +Y  +I   C    I  A+++F  M S    ++ +++  LI+   +   V E  SL S 
Sbjct: 649 ESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSV 708

Query: 419 MLSKGIKPTVVTYNTL 434
           M  K  +P+   Y  L
Sbjct: 709 MEEKNYRPSDALYARL 724



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 142/334 (42%), Gaps = 11/334 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M+     P PV+ + I+   L +    D    +  ++ +AG+ PD++T++I
Sbjct: 404 SEAMLVLDDMMEKGVQPSPVT-YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +  +C  GR+     ++  ++     PN VT+ +LI G        +A + F       
Sbjct: 463 FVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG 522

Query: 208 CEPDVFTYNTLINGLCRTGHT------IVALNLFEEMANGNGEFGVVCK---PNTV-TYN 257
           C+P+  +Y  L+  L +   +       V++    EM   +G    + K   P+ +  YN
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
             +  LC+   +D+AK L ++M+  N+ P    YTS+I   C      EA      M+  
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P + ++  I+  LC+ G +  A ++   M+ +  N     +  LIDG      +   
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
             L   ME          Y  L        D++E
Sbjct: 703 SSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 103/264 (39%), Gaps = 17/264 (6%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILF--GCLAKNKHYDTVLSLFKRLNSAGLFP 140
           NL+T N  +C +     +  +    S+F  +   GC    + Y  +L L  +  S+   P
Sbjct: 491 NLVTYNALICGYA---NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
               +S+ I    +M +  HG   L  +++         +   +  LC   R+ EA  L 
Sbjct: 548 ---ANSVSIWKIAEM-KYLHGL--LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILL 601

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + +     P    Y ++I   CR      AL   + M       G +  P   +Y  II
Sbjct: 602 IEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS----GYI--PQLESYRHII 655

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
             LC+EG +  AK++F  M  +  N + + +  +I G        E   L   M ++  +
Sbjct: 656 SSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYR 715

Query: 321 PDVVTFSVIMDELCKNGKMDKASR 344
           P    ++ +  ++     + + +R
Sbjct: 716 PSDALYARLTGKITDANDIQEIAR 739


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 236/536 (44%), Gaps = 77/536 (14%)

Query: 41  NEPSYPTTTSKLKES-LRLTVKDRA-SLK--KFLKERCKSSGQGDINLITPNEALCIFDY 96
           N P+ P + S+  ++ L L+ +  + S+K    L E     GQ D+       A  +F  
Sbjct: 149 NSPA-PGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDV-------ARKVFGE 200

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M       P V ++  +   L +    D   ++   L  +G+ P + T+++L++  CK G
Sbjct: 201 MRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSG 260

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           RV   F + GR++     P+ VTF  LI GL    +  E  A+  + + F   P+   YN
Sbjct: 261 RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYN 320

Query: 217 TLINGLCRTGH------------------TIVALNL-----------------FEEMA-- 239
            +I   CR GH                  T+V  NL                  +EM   
Sbjct: 321 EMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLA 380

Query: 240 -----------------NGNGEFGVVC-----------KPNTVTYNTIIDGLCKEGFVDK 271
                             G G   +V            KPN       I  LCK G  ++
Sbjct: 381 GMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEE 440

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A E++ ++  + +  +V T  ++I G C  N+  EA ++   M++ GV+ D +T+++++ 
Sbjct: 441 AAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQ 500

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK  KMD+A +L + MI RG  P+ +T+N  +  YC   K++    L   M+S G   
Sbjct: 501 GCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKP 560

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+V+Y T+I+ YCK KD+ +A    +E++  G++P  V YN L  G      +  A+ + 
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D M+ N +     TYN+ +  +C +G V E   +F        EL ++ Y  +I G
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQG 676



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 181/385 (47%), Gaps = 6/385 (1%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D VL L + + +  L P+    +  I   CK G+      +  ++L      N  T  +L
Sbjct: 404 DLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNAL 463

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I GLC  + + EA  +         E D  TYN +I G C+      A+ L ++M     
Sbjct: 464 IHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG- 522

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                 KP+  T+N  +   C  G V++   L  +MK E + PD+VTY ++I G+C A D
Sbjct: 523 -----FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            ++A     E+M  G++P+ V ++ ++    +NG +  A  +L+ M + G+ P   TYN+
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L+   C    ++  + +F           V+ Y  +I  +CK   ++EA+  + EM S+G
Sbjct: 638 LMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG 697

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           I P  +TY TL     +    E A KLFDEM    +  D+ +YN  I G C+   + + +
Sbjct: 698 IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMV 757

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           E    +     + +  SYN  +DG+
Sbjct: 758 ESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 177/423 (41%), Gaps = 29/423 (6%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P+P P SS   L   +  + H         R     L P + T  +L +       +   
Sbjct: 58  PAPLPASSAQRLLQHILSDAHASA-----SRHAEDLLSPRVSTL-LLQSLVADRASLPSA 111

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLC---------------AESRIMEAAALFTKHRVF 206
             ++ R+LR  F P +V   ++    C               A   +  AA  F +    
Sbjct: 112 RRLVSRLLR--FNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSAR 169

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P + T + L+  L   G   VA  +F EM +G         P+  TY  +I  LC+ 
Sbjct: 170 GASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK-----TVAPDVHTYTAMIKALCRA 224

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D A  +  +++   I P VVTY  ++   C +    EA RL   M++  V+P +VTF
Sbjct: 225 GEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTF 284

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +++  L +  +  +   +L+ M   G+ PN   YN +I  +C       A KLF  M S
Sbjct: 285 GILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVS 344

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG-LFEIHQVE 445
            G    VV+YN +    CK  ++E A  +  EML  G+      +N++    L    +++
Sbjct: 345 KGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLD 404

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L+L  EM    +  +       I  LCKSG   EA E++  +      +N+ + N LI
Sbjct: 405 LVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALI 464

Query: 506 DGL 508
            GL
Sbjct: 465 HGL 467



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 9/250 (3%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPD 141
           NL    E L + D M      P  V+   I+ G C AK+ H          L   GL P+
Sbjct: 539 NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN--EYLTELMKNGLRPN 596

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
              ++ LI  + + G +S    +L  +  +   P  VT+ SL+  +C    + E  A+F 
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFA 656

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +  V   E  V  Y  +I G C+ G    A+  F+EM +          PN +TY T++ 
Sbjct: 657 QCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG------IPPNKMTYTTLMF 710

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
              K G  ++A +LF +M    I PD V+Y ++I GFC  +  ++      EM  Q ++ 
Sbjct: 711 AYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQ 770

Query: 322 DVVTFSVIMD 331
           D  +++  +D
Sbjct: 771 DGCSYNAFVD 780



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 6/194 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N L G   +N +    + +   +   G+ P   T++ L+   C  G V     V
Sbjct: 595 PNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAV 654

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             + +        + +T +I+G C   +I EA   F +       P+  TY TL+    +
Sbjct: 655 FAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSK 714

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G+   A  LF+EM +     G+V  P++V+YNT+I G C+   +DK  E   +M  + +
Sbjct: 715 SGNKEEASKLFDEMVS----LGIV--PDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768

Query: 285 NPDVVTYTSVIRGF 298
             D  +Y + + G 
Sbjct: 769 KQDGCSYNAFVDGI 782


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 213/440 (48%), Gaps = 42/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    F+ LF  L +   ++  L  F ++    +FP   + + L++ F ++G+       
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   P   T+  +I  +C E  I  A+ LF + +     PD  TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G     +  FEEM +      + C+P+ +TYNT+I+  CK G + K  E F +MK   +
Sbjct: 181 VGRLDDTVYFFEEMKS------MSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y++++  FC  +   +A + +++M   G+ P+  T++ ++D  CK G +  A R
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFR 294

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M   GV  N  TY  LIDG C  ++I  A +LF  M + G + ++ SY  LI+ + 
Sbjct: 295 LADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFV 354

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K K+++ AL L  EM  +GIKP ++ Y T    L  + ++E A  + +EM+   + A+T+
Sbjct: 355 KAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTF 414

Query: 465 TYNN-----------------------------------FIDGLCKSGFVLEALELF-RA 488
            Y                                      IDGLCK+  V +A++ F R 
Sbjct: 415 IYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRI 474

Query: 489 IRDSKYELNIVSYNCLIDGL 508
             D   + N   Y  +IDGL
Sbjct: 475 SNDFGLQANAAIYTAMIDGL 494



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 198/397 (49%), Gaps = 11/397 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N +     K    D  +  F+ + S    PD+ T++ LINCFCK G++  G   
Sbjct: 166 PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEF 225

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +S   PN V++++L+   C E  + +A   +   R     P+  TY +L++  C+
Sbjct: 226 FREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCK 285

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  L +EM+    E+      N VTY  +IDGLC    + +A+ELF KM    +
Sbjct: 286 IGNLSDAFRLADEMSQVGVEW------NVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++ +YT++I GF  A + + A  L  EM  +G++PD++ +   +  LC   K++ A  
Sbjct: 340 IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKV 399

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++  M  +G+  NT+ Y TL+D Y  ++       L   M         V++  LI+  C
Sbjct: 400 VMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459

Query: 405 KNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           KNK V +A+  +  + +  G++     Y  +  GL +  QVE A  LF++M +  +  D 
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDR 519

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             Y + IDG  K G V++AL    A+RD   E+ + S
Sbjct: 520 TAYTSLIDGKLKQGNVVQAL----ALRDKMAEIGVES 552



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 145/261 (55%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           VC P    ++ +   L +E   ++A + F KMK   + P   +   ++  F      +  
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           KR F +M+  G +P V T+++++D +CK G ++ AS L E M +RG+ P+T TYN++IDG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           Y    ++D     F  M+S  C  DV++YNTLIN +CK   + + L  + EM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VV+Y+TL     +   +++ALK + +MRR  +  + +TY + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +     E N+V+Y  LIDGL
Sbjct: 298 EMSQVGVEWNVVTYTALIDGL 318



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 6/116 (5%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           T  +LI+  CK   VS      GRI        NA  +T++I GLC E ++  A  LF +
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQ 509

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA----NGNGEFGVVCKPNTV 254
                  PD   Y +LI+G  + G+ + AL L ++MA         FG +C+ NT+
Sbjct: 510 MAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDLCQ-NTI 564



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 53/121 (43%)

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           N C+     ++ L +   +    EEAL  +S+M    + P   + N L      + + + 
Sbjct: 57  NVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDG 116

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             + F +M         +TYN  ID +CK G +  A  LF  ++      + V+YN +ID
Sbjct: 117 MKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMID 176

Query: 507 G 507
           G
Sbjct: 177 G 177


>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
 gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 216/404 (53%), Gaps = 31/404 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL  F++ML   P P  +    +L   +   ++YD V+SL + +  AGL P+ YT +I
Sbjct: 66  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLNI 125

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFCK+  V  GF VL ++++    P+ V FT+LI GLC   +  +A  LF       
Sbjct: 126 LINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFD------ 179

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            E     YN+LI+GLC       A  +  EM + N        P+ VT+N ++D  CKEG
Sbjct: 180 -ETVERGYNSLIHGLCNCSQWKEASAILNEMTSLN------IMPDIVTFNVLVDTFCKEG 232

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+ +   M + ++  DVVTY S++ G     +  EA++LF  M+ +G +P+V +++
Sbjct: 233 KVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYN 292

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++  CK   +D+A +L   MI +G+ PN  +YNT   G+C   K+  A++L  +M +N
Sbjct: 293 ILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTN 350

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+ +Y+ L++ +CK  +   A  L+SE+  +G++                  ++ A
Sbjct: 351 GNLPDLCTYSILLDGFCKQGNHIAARKLFSELFVQGLQ----------------RLLDEA 394

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           L+ F +M  +    + ++YN  I G  +      A++L   +RD
Sbjct: 395 LETFRKMEEDGCPPNEWSYNVIIRGFLRHRDESRAVQLIGEMRD 438



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 181/354 (51%), Gaps = 35/354 (9%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALN 233
           P  + FT L+  +    +  +A    ++    A   P+ +T N LIN  C+  H  +  +
Sbjct: 82  PCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLNILINCFCKLQHVDLGFS 141

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           +  ++     + G+  +P+ V + T+I+GLCK G   +A ELF    DE +      Y S
Sbjct: 142 VLAKVI----KLGL--QPDVVPFTTLINGLCKVGKFSQAVELF----DETVERG---YNS 188

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I G C  + W EA  +  EM    + PD+VTF+V++D  CK GK+ +A  +L+ M    
Sbjct: 189 LIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMS 248

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V  +  TYN+L+ G+ L  ++  ARKLF  M + GC  +V SYN LIN YCK + ++EA 
Sbjct: 249 VELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAK 308

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L++EM+ +G+ P +V+YNT   G  ++ ++  A +L + M  N    D  TY+  +DG 
Sbjct: 309 QLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTYSILLDGF 366

Query: 474 CKSG-------------------FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK G                    + EALE FR + +     N  SYN +I G 
Sbjct: 367 CKQGNHIAARKLFSELFVQGLQRLLDEALETFRKMEEDGCPPNEWSYNVIIRGF 420



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 46/256 (17%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
            +N L   L     +    ++   + S  + PDI T ++L++ FCK G+VS    VL  +
Sbjct: 185 GYNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTM 244

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  + VT+ SL+ G      ++EA  LF       C+P+VF+YN LING C+    
Sbjct: 245 TEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKAEMI 304

Query: 229 IVALNLFEEMANGNGEFGVV-------CK--------------------PNTVTYNTIID 261
             A  LF EM +      +V       C+                    P+  TY+ ++D
Sbjct: 305 DEAKQLFNEMIHQGLTPNIVSYNTHGFCQLGKLREAQELNENMHTNGNLPDLCTYSILLD 364

Query: 262 GLCKEG-------------------FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
           G CK+G                    +D+A E F KM+++   P+  +Y  +IRGF    
Sbjct: 365 GFCKQGNHIAARKLFSELFVQGLQRLLDEALETFRKMEEDGCPPNEWSYNVIIRGFLRHR 424

Query: 303 DWNEAKRLFIEMMDQG 318
           D + A +L  EM D+G
Sbjct: 425 DESRAVQLIGEMRDRG 440


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 230/457 (50%), Gaps = 44/457 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL +   M +M   P  V+ +N+L   L+ +   +    L + +   GL    YT+  
Sbjct: 207 QEALQLLLQMQKMGCLPNDVT-YNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDP 265

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +C+ G++     +   +L     P  VT+ +++ GLC   R+ +A  L        
Sbjct: 266 LIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 325

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKE 266
             PD+ +YNTLI G  R G+   A  LF E+      F G+V  P+ VTYNT+IDGLC+ 
Sbjct: 326 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL-----RFRGLV--PSVVTYNTLIDGLCRM 378

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD---- 322
           G +D A  L  +M     +PDV T+T ++RGFC   +   AK LF EM+++G+QPD    
Sbjct: 379 GDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAY 438

Query: 323 -------------------------------VVTFSVIMDELCKNGKMDKASRLLELMIW 351
                                          ++T++V +D L K G + +AS L++ M++
Sbjct: 439 ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLY 498

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G+ P+  TY ++I  + +   +  AR +F+ M S G    VV+Y  LI+ Y     ++ 
Sbjct: 499 NGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKL 558

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A+  + EM  KG+ P V+TYN L  GL ++ ++++A K F EM+   ++ + YTY   I+
Sbjct: 559 AILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             C  G   EAL L++ + D + + +  +++ L+  L
Sbjct: 619 ENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 200/387 (51%), Gaps = 6/387 (1%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           ++   D    ++  +   G+ P + T++ +++ FCK G+V     +L ++ +    PN V
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+  L+ GL     + +A  L  +      E   +TY+ LI G C  G    A  L EEM
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            +     G V  P  VTYNTI+ GLCK G V  A++L   M ++N+ PD+V+Y ++I G+
Sbjct: 287 LSR----GAV--PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 340

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
               +  EA  LF E+  +G+ P VVT++ ++D LC+ G +D A RL + MI  G +P+ 
Sbjct: 341 TRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDV 400

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           +T+  L+ G+C    +  A++LF  M + G   D  +Y T I    K  D  +A  +  E
Sbjct: 401 FTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 460

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           ML++G  P ++TYN    GL ++  ++ A +L  +M  N +  D  TY + I     +G 
Sbjct: 461 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLI 505
           + +A  +F  +       ++V+Y  LI
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLI 547



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 160/302 (52%), Gaps = 6/302 (1%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P V TYNT+++  C+ G    AL L  +M        + C PN VTYN +++GL   
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQK------MGCLPNDVTYNVLVNGLSHS 238

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++AKEL  +M    +     TY  +IRG+C     +EA RL  EM+ +G  P +VT+
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + IM  LCK G++  A +LL++M+ + + P+  +YNTLI GY     I  A  LF  +  
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G +  VV+YNTLI+  C+  D++ A+ L  EM+  G  P V T+  L  G  ++  +  
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +LFDEM    +  D + Y   I G  K G   +A  +   +    +  ++++YN  ID
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478

Query: 507 GL 508
           GL
Sbjct: 479 GL 480



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 160/277 (57%), Gaps = 2/277 (0%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           ++++  E+ N   E G+  +P  VTYNT++D  CK+G V +A +L L+M+     P+ VT
Sbjct: 170 SIDVAREVYNVMVECGI--RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVT 227

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  ++ G  ++ +  +AK L  EM+  G++    T+  ++   C+ G++D+ASRL E M+
Sbjct: 228 YNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEML 287

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RG  P   TYNT++ G C   ++  ARKL   M +   M D+VSYNTLI  Y +  ++ 
Sbjct: 288 SRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 347

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA  L++E+  +G+ P+VVTYNTL  GL  +  ++ A++L DEM ++    D +T+   +
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILV 407

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            G CK G +  A ELF  + +   + +  +Y   I G
Sbjct: 408 RGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 8/261 (3%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML     P   +    + G L K         + + + + G  PD+ T+++ I+  
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 480

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K+G +     ++ ++L +   P+ VT+TS+I        + +A A+F +       P V
Sbjct: 481 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSV 540

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY  LI+     G   +A+  F EM     E GV   PN +TYN +I+GLCK   +D+A
Sbjct: 541 VTYTVLIHSYAVRGRLKLAILHFFEMH----EKGV--HPNVITYNALINGLCKVRKMDQA 594

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            + F +M+ + I+P+  TYT +I   C    W EA RL+ +M+D+ +QPD  T S ++  
Sbjct: 595 YKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKH 654

Query: 333 LCKNGKMDKASRLLELMIWRG 353
           L K+ K     R LE +I  G
Sbjct: 655 LNKDYK-SHVVRHLENVIAAG 674


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 169/300 (56%), Gaps = 5/300 (1%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  +YNT++  LCR G    AL L   M++   E  +  +PN ++Y T++  LC +    
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSH---EPRLASRPNAISYTTLMRALCADRRAA 111

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A  L   M+D  + PDVVTY ++IRG C A D + A  L  EM + G++P+VV +S ++
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
              CK G+ +   ++ E M  RG+ P+   Y  LID  C   K+  A ++   M   G  
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +VV+YN LIN  CK   V EAL L   M  KG++P VVTYNTL  GL  + +++ A+ L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 451 FDEMRRNH--VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +EM +    V  D  T+N+ I GLCK G++ +AL++   + ++    N+V++N LI GL
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 11/407 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P   S+  L   L  ++     + L + +   G+ PD+ T+  LI   C    V    
Sbjct: 90  SRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAV 149

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L  +  S   PN V ++ L+ G C   R      +F +      EPDV  Y  LI+ L
Sbjct: 150 ELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSL 209

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR G    A  + + M     E G+  +PN VTYN +I+ +CKEG V +A +L   M ++
Sbjct: 210 CRHGKVKKAARVMDMMT----ERGL--EPNVVTYNVLINSMCKEGSVREALDLRKNMSEK 263

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG---VQPDVVTFSVIMDELCKNGKM 339
            + PDVVTY ++I G     + +EA  L  EMM QG   V+PD++TF+ ++  LCK G M
Sbjct: 264 GVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWM 322

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A ++  +M   G   N   +N LI G     K+  A +L   M S+G   D  +Y+ L
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSIL 382

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           IN +CK + VE A S  SEM  +G++P  V Y  L   + +   + +A  LF+EM RN  
Sbjct: 383 INGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-C 441

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             D   Y+  I G  KSG    A E  + + D     + V+Y+  I+
Sbjct: 442 KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPIN 488



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 187/375 (49%), Gaps = 50/375 (13%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALF-----TKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
           +AV++ +++  LC +  +   AALF     +     A  P+  +Y TL+  LC       
Sbjct: 55  DAVSYNTVLAALCRQGCL--DAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A+ L   M +     GV  +P+ VTY T+I GLC    VD A EL  +M +  I P+VV 
Sbjct: 113 AVGLLRSMQD----CGV--RPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y+ ++ G+C    W    ++F EM  +G++PDVV ++ ++D LC++GK+ KA+R++++M 
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RG+ PN  TYN LI+  C    +  A  L  +M   G   DVV+YNTLI       +++
Sbjct: 227 ERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286

Query: 411 EALSLYSEMLSKG--IKPTVVTYNT----------------------------------- 433
           EA++L  EM+     ++P ++T+N+                                   
Sbjct: 287 EAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNL 346

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  GL  +H+V++A++L DEM  + +  D++TY+  I+G CK   V  A      +R   
Sbjct: 347 LIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQG 406

Query: 494 YELNIVSYNCLIDGL 508
            E   V Y  L+  +
Sbjct: 407 MEPEPVHYIPLLKAM 421



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 187/419 (44%), Gaps = 41/419 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ L     K   +++V  +F+ ++  G+ PD+  ++ LI+  C+ G+V     V
Sbjct: 162 PNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARV 221

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN VT+  LI  +C E  + EA  L         +PDV TYNTLI GL  
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ L EEM  G        +P+ +T+N++I GLCK G++ +A ++   M +   
Sbjct: 282 VLEMDEAMALLEEMMQGETRV----RPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++V +  +I G    +   +A  L  EM   G+QPD  T+S++++  CK  ++++A  
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN----------------- 387
            L  M  +G+ P    Y  L+   C    +  AR LF  M+ N                 
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFK 457

Query: 388 -----------------GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                            G + D V+Y+  IN + K+ D+  A  +  +M + G  P V  
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAV 517

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +++L  G       E+ L+L  EM    VA D    +  +  L   G  +E  +L +++
Sbjct: 518 FDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSL 573



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 14/323 (4%)

Query: 88  NEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +EA+ + + M++      P + +FN +   L K       L +   +   G   ++   +
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFN 345

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI    ++ +V     ++  +  S   P++ T++ LI G C   ++  A +  ++ R  
Sbjct: 346 LLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             EP+   Y  L+  +C  G    A +LF EM          CK +   Y+T+I G  K 
Sbjct: 406 GMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-------CKLDAAAYSTMIHGAFKS 458

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G    A+E    M DE + PD VTY+  I  F  + D   A+R+  +M   G  PDV  F
Sbjct: 459 GEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVF 518

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-- 384
             ++      G  +K   L   M  + V  +    +T++    L   I+  +KL  S+  
Sbjct: 519 DSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTS--LGASIE-GQKLLQSLPG 575

Query: 385 -ESNGCMHDVVSYNTLINWYCKN 406
            ++     DV+S + ++N   K+
Sbjct: 576 FDTEISKGDVISPHDVMNMLQKH 598



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK---GIKPTVVTYNTLFLGLFEIHQVER 446
           + D VSYNT++   C+   ++ AL L   M  +     +P  ++Y TL   L    +  +
Sbjct: 53  VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A+ L   M+   V  D  TY   I GLC +  V  A+EL   + +S  E N+V Y+CL+ 
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 507 G 507
           G
Sbjct: 173 G 173


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 225/422 (53%), Gaps = 6/422 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++AL +F  M+ +    P + SFN +     ++  +      F    +AG+ P++ T++
Sbjct: 94  PDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYN 153

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI   CK  +   G  +L  +  +   P+ +++ +LI  L     +++A  LF +  V 
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV  YN LI+G  R G  + A  +++ +   +  +     P+  TYN +I+GLCK 
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY-----PSVETYNIMINGLCKL 268

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D++ E++ +MK    +PD+ T++S+I G   A ++N A+++F EM++ G+ PDV T+
Sbjct: 269 GKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTY 328

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  L + GK++K   L  +M  +    N  +YN LI G     K++ A   +  +  
Sbjct: 329 NAMLSGLFRTGKLNKCFELWNVMS-KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHE 387

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   D  +Y  LIN  CKN  + +AL +  E  ++G       Y+++  GL +   +E+
Sbjct: 388 RGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQ 447

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A++L  +M++N    +++ +N+ I+G  ++  + EA+ + R ++       +VSYN +I+
Sbjct: 448 AVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIIN 507

Query: 507 GL 508
           GL
Sbjct: 508 GL 509



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 214/421 (50%), Gaps = 9/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHSI 147
           +A+ +FD M  +    P V  +NIL     +   +     ++KRL   + ++P + T++I
Sbjct: 202 DAVELFDEM-SVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNI 260

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  CK+G++     +  R+ ++  +P+  TF+S+I GL        A  +F +     
Sbjct: 261 MINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESG 320

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV TYN +++GL RTG       L+  M+  N      C  N V+YN +I GL    
Sbjct: 321 LSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN-----CC--NIVSYNMLIQGLLDNK 373

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A   +  + +  +  D  TY  +I G C     N+A R+  E  ++G   D   +S
Sbjct: 374 KVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYS 433

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK G +++A  L+  M       N++ +N+LI+GY    K++ A  +   M+S 
Sbjct: 434 SMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSK 493

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C   VVSYNT+IN  CK +   +A     EML +G+KP ++TY+ L  GL    +V+ A
Sbjct: 494 DCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMA 553

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L L+ +     +  D   +N  I GLC +  V  ALE+F  +R      ++V++N +++G
Sbjct: 554 LNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEG 613

Query: 508 L 508
           L
Sbjct: 614 L 614



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 220/430 (51%), Gaps = 45/430 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E++ +++ M +   SP  + +F+ +   L+K  +++    +F+ +  +GL PD+ T++ 
Sbjct: 272 DESMEMWNRMKKNEKSPD-LFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNA 330

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++   + G+++  F  L  ++      N V++  LI+GL    ++ +A   +       
Sbjct: 331 MLSGLFRTGKLNKCFE-LWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERG 389

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  TY  LINGLC+ G+   AL + EE  N   +       +T  Y++++ GLCK+G
Sbjct: 390 LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL------DTFAYSSMVHGLCKKG 443

Query: 268 FVDKAKELFLKMK------------------------DENIN-----------PDVVTYT 292
            +++A EL  +MK                        +E I+           P VV+Y 
Sbjct: 444 MLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYN 503

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G C A  +++A     EM+++G++PD++T+S+++D LC+  K+D A  L    I +
Sbjct: 504 TIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK 563

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            + P+   +N +I G C   K+D A ++F  M    C+ D+V++NT++    K  D  EA
Sbjct: 564 RLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEA 623

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK-LFDEMRRNHVAADTYTYNNFID 471
           L ++  +L  G++P +++YN  F GL    +V  A++ L+D + R  +  +  T+N  + 
Sbjct: 624 LKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRG-ILPNAPTWNVLVR 682

Query: 472 GLCKSGFVLE 481
            +     ++E
Sbjct: 683 AVVDDKPLME 692



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 161/334 (48%), Gaps = 9/334 (2%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG ++     +A+C +  +L         +++ +L   L KN + +  L + +   + G 
Sbjct: 367 QGLLDNKKVEQAICYWQ-LLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGA 425

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             D + +S +++  CK G +     ++ ++ ++    N+  F SLI G     ++ EA +
Sbjct: 426 DLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAIS 485

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
           +  + +   C P V +YNT+INGLC+    +   L+L E +  G        KP+ +TY+
Sbjct: 486 VLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG-------LKPDMITYS 538

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +IDGLC+   VD A  L+ +  ++ + PD+  +  +I G C A   + A  +F +M   
Sbjct: 539 LLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
              PD+VT + IM+ L K G   +A ++ + ++  G+ P+  +YN    G C   ++  A
Sbjct: 599 NCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDA 658

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            +        G + +  ++N L+     +K + E
Sbjct: 659 IEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 138/253 (54%), Gaps = 2/253 (0%)

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + I    K    D+A  LF  M D    NP + ++ S++  F  +N W EA+  F     
Sbjct: 83  SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQT 142

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G+ P++ T+++++   CK  + +K   LL  M   G+NP+  +Y TLI+    +  +  
Sbjct: 143 AGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLD 202

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTLF 435
           A +LF  M   G   DV+ YN LI+ + +  D  +A  ++  +L++  + P+V TYN + 
Sbjct: 203 AVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMI 262

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL ++ +++ ++++++ M++N  + D +T+++ I GL K+G    A ++F+ + +S   
Sbjct: 263 NGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322

Query: 496 LNIVSYNCLIDGL 508
            ++ +YN ++ GL
Sbjct: 323 PDVRTYNAMLSGL 335



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 9/247 (3%)

Query: 52  LKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFN 111
           L++++ L  + + + +K       S   G +      EA+ +   M +     P V S+N
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM-KSKDCAPTVVSYN 503

Query: 112 ILFGCLAKNKHY-DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
            +   L K + + D  LSL K +   GL PD+ T+S+LI+  C+  +V     +  + + 
Sbjct: 504 TIINGLCKAERFSDAYLSL-KEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCIN 562

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+      +I GLC   ++  A  +FT+ R   C PD+ T+NT++ GL + G  + 
Sbjct: 563 KRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVE 622

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           AL +++ +     E G+  +P+ ++YN    GLC    V  A E      D  I P+  T
Sbjct: 623 ALKIWDRIL----EAGL--QPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPT 676

Query: 291 YTSVIRG 297
           +  ++R 
Sbjct: 677 WNVLVRA 683



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL IF  M +++  P  V+   I+ G L K       L ++ R+  AGL PDI +++I  
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEG-LYKAGDCVEALKIWDRILEAGLQPDIISYNITF 646

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
              C   RVS     L   L     PNA T+  L++ +  +  +ME A
Sbjct: 647 KGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYA 694


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 205/452 (45%), Gaps = 59/452 (13%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  +   L K    D    +   L  AGL P + T+++L++  CK GRV   F + GR+
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +   TP+ VTF  LI GL    R  E   +  +       P+   YN LI   CR GH 
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL----------- 277
             AL LF+EM           KP  VTYN I   LCKEG +++A+ +             
Sbjct: 133 SQALRLFDEMVLKK------MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 278 -------------------------KMKDENINPDVVTYTSVIRGFCYAND-------W- 304
                                    +M    + P+    T+ +R  C           W 
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 305 ---------NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
                     EA ++   M+++G++ D +T+++++   CK+ KM++A +L   M  RG  
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+ +T+NTL+  YC   K++    L   M++ G   D+VSY T+I+ +CK KD+ +A   
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 366

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            +E++ +G+KP V  YN L  G      +  A+   + M+ N +     TY + +  +C 
Sbjct: 367 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 426

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +G V EA  +F   R++  +L ++ Y  +I G
Sbjct: 427 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQG 458



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 194/448 (43%), Gaps = 47/448 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L K+   +    L  R+   G+ P + T  ILIN   +  R     +V
Sbjct: 44  PTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIV 103

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +   +PN V +  LI   C +    +A  LF +  +   +P   TYN +   LC+
Sbjct: 104 LQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 163

Query: 225 TGHTIVALNLFEEMANGN-----GEFGVVC-------------------------KPNTV 254
            G    A  + E+M +       G F  V                          +PN  
Sbjct: 164 EGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDP 223

Query: 255 TYNTIIDGLCKEG-----------------FVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                +  LCK G                 ++ +A ++   M ++ I  D +TY  +IRG
Sbjct: 224 LMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRG 283

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C  +   EA +L  +M  +G +PD+ TF+ ++   C  GKM++   LL+ M   G+ P+
Sbjct: 284 CCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPD 343

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             +Y T+IDG+C    I  A++    +   G   +V  YN LI  Y +N D+  A+    
Sbjct: 344 IVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVE 403

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
            M S GI+PT VTY +L   +     VE A  +F + R N+V      Y   I G CK G
Sbjct: 404 TMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLG 463

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLI 505
            ++EA+  F  +R      N ++Y  L+
Sbjct: 464 KMVEAVAYFEEMRSRGISPNKLTYTTLM 491



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 192/448 (42%), Gaps = 47/448 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F IL   LA+ + +  V  + + +   G+ P+   ++ LI   C+ G  S    +
Sbjct: 79  PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 138

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAES------RIME-----------------AAALFT 201
              ++     P AVT+  + K LC E       RI+E                  A L  
Sbjct: 139 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 198

Query: 202 KHRVF-------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
           + R                  P+       +  LC+ G    A+ ++ +  N        
Sbjct: 199 RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEA 258

Query: 249 CKP-----------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
            K            +++TYN +I G CK+  +++A +L   M      PD+ T+ +++  
Sbjct: 259 TKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHA 318

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C      E   L  +M  +G+QPD+V++  I+D  CK   + KA   L  ++ RG+ PN
Sbjct: 319 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPN 378

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
            + YN LI GY     I  A     +M+SNG     V+Y +L+ W C    VEEA +++S
Sbjct: 379 VFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFS 438

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +     +   V+ Y  +  G  ++ ++  A+  F+EMR   ++ +  TY   +    KSG
Sbjct: 439 QARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSG 498

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLI 505
              EA +LF  +  S    + ++Y  LI
Sbjct: 499 NSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 181/401 (45%), Gaps = 25/401 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +FD M+     P  V+ +N++   L K    +    + + + S G+       + 
Sbjct: 133 SQALRLFDEMVLKKMKPTAVT-YNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191

Query: 148 LINCFCKMGRVSHGFV-VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH--- 203
           ++    +  R     V +   ++     PN    T+ ++ LC   +  EA  ++ K    
Sbjct: 192 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 251

Query: 204 --------RVF------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                   +V         E D  TYN +I G C+      A+ L  +M           
Sbjct: 252 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG------F 305

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP+  T+NT++   C  G +++   L  +MK E + PD+V+Y ++I G C A D  +AK 
Sbjct: 306 KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 365

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
              E+MD+G++P+V  ++ ++    +NG +  A   +E M   G+ P   TY +L+   C
Sbjct: 366 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 425

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               ++ A+ +F     N     V+ Y  +I  YCK   + EA++ + EM S+GI P  +
Sbjct: 426 HAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKL 485

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           TY TL     +    E A KLFDEM  + V  D  TY   I
Sbjct: 486 TYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 59/385 (15%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  ++T++IK LC   ++     +  +      +P V TYN L++ LC++G    A  L 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
             M  G         P+ VT+  +I+GL +     +   +  +M+   ++P+ V Y  +I
Sbjct: 70  GRMEQGG------MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI----- 350
              C     ++A RLF EM+ + ++P  VT+++I   LCK G+M++A R+LE M+     
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 183

Query: 351 -----------W--------------------RGVNPNTYTYNTLIDGYCLTDK------ 373
                      W                    RG+ PN       +   C   K      
Sbjct: 184 VHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVG 243

Query: 374 -----------IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
                      +  A K+  +M + G   D ++YN +I   CK+  +EEA+ L+ +M  +
Sbjct: 244 IWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 303

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G KP + T+NTL      + ++E    L D+M+   +  D  +Y   IDG CK+  + +A
Sbjct: 304 GFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKA 363

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
            E    + D   + N+  YN LI G
Sbjct: 364 KEYLTELMDRGLKPNVFIYNALIGG 388



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 99/175 (56%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           +  N+  +  +YT++I+  C A   +    +  E+   G+QP VVT++V+MD LCK+G++
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           ++A RL   M   G+ P+  T+  LI+G    ++      +   ME  G   + V YN L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           I W+C+     +AL L+ EM+ K +KPT VTYN +   L +  ++ERA ++ ++M
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDM 177



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 72/157 (45%)

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           R V  N Y+Y  +I   C   K+D   ++   +   G    VV+YN L++  CK+  VEE
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  L   M   G+ P+VVT+  L  GL    +      +  EM +  V+ +   YN  I 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             C+ G   +AL LF  +   K +   V+YN +   L
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL 161



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 42/88 (47%)

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           S+ +     +Y  +   L +  +V+   ++  E+ R  +     TYN  +D LCKSG V 
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA  L   +       ++V++  LI+GL
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGL 91


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  + D M      P  V   N++ G + +  + D    + K + +AG+ P+  T+  
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLIDGFM-REGNADEAFKMIKEMVAAGVQPNKITYDN 389

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CKMG++    ++L +++R    P+ +T+  +I+G        +A  L ++     
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V+TY+ +I+GLC++G    A +L EEM           KPN   Y  +I G C+EG
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAFVYAPLISGYCREG 503

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A E+F KM   N+ PD+  Y S+I G        E+ + F +M ++G+ P+  T+S
Sbjct: 504 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 563

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++    KNG ++ A +L++ M+  G+ PN   Y  L++ Y  +D I+     F SM   
Sbjct: 564 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ 623

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G M D   Y  LI+    + ++E A  + S +   G  P V  Y++L  GL +    E+A
Sbjct: 624 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKA 683

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             + DEM +  V  +   YN  IDGLCKSG +  A  +F +I       N V+Y  LIDG
Sbjct: 684 FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 743



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 211/474 (44%), Gaps = 76/474 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L     K + +DT   +   +   G   +  T+++LI   C+ G V   F  
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T+ +LI GLC   R  EA AL  +      +P+V  Y  LI+G  R
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  + +EM       GV  +PN +TY+ ++ GLCK G +D+A  L  +M  ++ 
Sbjct: 362 EGNADEAFKMIKEMVAA----GV--QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY  +I G    +   +A RL  EM + G+ P+V T+S+++  LC++G+ +KAS 
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYC--------------------LTD------------ 372
           LLE M  +G+ PN + Y  LI GYC                    L D            
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 373 ---KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++ + K F  M+  G + +  +Y+ LI+ Y KN D+E A  L   ML  G+KP  V
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 595

Query: 430 TYNTLFLGLFEIHQVER-----------------------------------ALKLFDEM 454
            Y  L    F+   +E+                                   A ++   +
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 655

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +N    D + Y++ I GLCK+    +A  +   +     + NIV YN LIDGL
Sbjct: 656 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 213/427 (49%), Gaps = 22/427 (5%)

Query: 97  MLRMHPSPPPV----------------SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           M+R +PSPP V                +  ++L     K+        +   +   G+ P
Sbjct: 148 MIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAP 207

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
            I   + L+    +   ++  + V   ++ +  +P+  T+++LI+  C       A  + 
Sbjct: 208 SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 267

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + R   C  +  TYN LI GLCR+G    A    ++M     ++G+V  P+  TY  +I
Sbjct: 268 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME----DYGLV--PDGFTYGALI 321

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +GLCK    ++AK L  +M    + P+VV Y ++I GF    + +EA ++  EM+  GVQ
Sbjct: 322 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+ +T+  ++  LCK G+MD+AS LL+ M+     P+T TYN +I+G+        A +L
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 441

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              ME+ G   +V +Y+ +I+  C++ + E+A  L  EM +KG+KP    Y  L  G   
Sbjct: 442 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 501

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
              V  A ++FD+M + +V  D Y YN+ I GL K G V E+ + F  +++     N  +
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561

Query: 501 YNCLIDG 507
           Y+ LI G
Sbjct: 562 YSGLIHG 568



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 204/440 (46%), Gaps = 44/440 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N++     ++        L   + +AG+ P++YT+SI+I+  C+ G       +
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PNA  +  LI G C E  +  A  +F K       PD++ YN+LI GL +
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    +   F +M     E G++  PN  TY+ +I G  K G ++ A++L  +M D  +
Sbjct: 537 VGRVEESTKYFAQMQ----ERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V Y  ++  +  ++D  +    F  M+DQGV  D   + +++  L  +G M+ A R
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 650

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLT--------------------------------- 371
           +L  +   G  P+ + Y++LI G C T                                 
Sbjct: 651 VLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLC 710

Query: 372 --DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I +AR +F S+ + G + + V+Y +LI+  CK  D+  A  LY+EML+ GI P   
Sbjct: 711 KSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            Y+ L  G      +E+A+ L +EM  R H  A   ++NN +DG CK G + E L+L   
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHV 828

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I       N ++   +I GL
Sbjct: 829 IMGRGLVPNALTIENIISGL 848



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 213/452 (47%), Gaps = 65/452 (14%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           IFD M +++  P      +++FG L+K    +     F ++   GL P+ +T+S LI+ +
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFG-LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI---------------------KGLCAES 191
            K G +     ++ R+L +   PN V +  L+                     +G+  ++
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 629

Query: 192 RI-------------MEAA-ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           RI             MEAA  + +        PDV  Y++LI+GLC+T     A  + +E
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M+    + GV   PN V YN +IDGLCK G +  A+ +F  +  + + P+ VTYTS+I G
Sbjct: 690 MS----KKGV--DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 743

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C   D + A  L+ EM+  G+ PD   +SV+       G +++A  L+E M  RG + +
Sbjct: 744 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HAS 802

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             ++N L+DG+C   K+    KL   +   G + + ++   +I+   +   + E  +++ 
Sbjct: 803 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 862

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH---------------VAAD 462
           E+  K  +     +++LF+ +  I+Q +  L + D+M R+H               + A 
Sbjct: 863 ELQQKTSESAARHFSSLFMDM--INQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 920

Query: 463 TY-----TYNNFIDGLCKSGFVLEALELFRAI 489
           +      +Y   +D LC+ G + EAL L + +
Sbjct: 921 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 952



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 130/306 (42%), Gaps = 29/306 (9%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V  ++ L   L K    +    +   ++  G+ P+I  ++ LI+  CK G +S+  
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   IL     PN VT+TSLI G C    I  A  L+ +       PD F Y+ L  G 
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 223 CRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
              G    A+ L EEM   G+            ++N ++DG CK G + +  +L   +  
Sbjct: 780 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 831

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIE-------------------MMDQGVQPD 322
             + P+ +T  ++I G   A   +E   +F+E                   M++QG  P 
Sbjct: 832 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 891

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            V   +I D  CK G +DKA  L ++++ +       +Y  ++D  C   K+  A  L  
Sbjct: 892 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 950

Query: 383 SMESNG 388
            M+  G
Sbjct: 951 EMDKRG 956


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 16/412 (3%)

Query: 88  NEALCIFDYM-----LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N AL  ++++     L +HP+     +FN++   + +    D  + +F+ +      PD 
Sbjct: 149 NRALEFYNHVVASKSLNIHPN---ALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDN 205

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           YT+S L++  CK  R+     +L  +      PN V F  LI  LC +  +  AA L   
Sbjct: 206 YTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDN 265

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
             +  C P+  TYN L++GLC  G    A++L  +M +        C PN VT+ T+I+G
Sbjct: 266 MFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK------CVPNDVTFGTLING 319

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
              +G       + + ++      +   Y+S+I G C    +N+A  L+ EM+ +G  P+
Sbjct: 320 FVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPN 379

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            + +S ++D LC+ GK+D+A   L  M  +G  PN++TY++L+ GY        A  ++ 
Sbjct: 380 TIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWK 439

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M +N C+H+ V Y+ LIN  CK+    EAL ++ +MLS+GIK  VV Y+++  G    +
Sbjct: 440 EMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNAN 499

Query: 443 QVERALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            VE+ LKLF++M  +   V  D  TYN  ++  C    +  A+++   + D 
Sbjct: 500 LVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQ 551



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 178/333 (53%), Gaps = 6/333 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PNA+TF  +IK +C    + +A  +F +  +  C PD +TY+TL++GLC+      A++L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +EM    G F     PN V +N +I  LCK+G + +A +L   M  +   P+ VTY ++
Sbjct: 228 LDEM-QVEGTF-----PNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL 281

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           + G C      +A  L  +M+     P+ VTF  +++     G+    +R+L  +  RG 
Sbjct: 282 VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH 341

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             N Y Y++LI G C   K + A +L+  M   GC  + + Y+ LI+  C+   ++EA  
Sbjct: 342 RGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARG 401

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
             SEM +KG  P   TY++L  G FE     +A+ ++ EM  N+   +   Y+  I+GLC
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLC 461

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K G  +EAL +++ +     +L++V+Y+ +I G
Sbjct: 462 KDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHG 494



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 167/316 (52%), Gaps = 8/316 (2%)

Query: 195 EAAALFTKHRV---FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           +A  LF  HR+   F C+  V ++N+++N + + G    AL  +  +        +   P
Sbjct: 114 KAVDLF--HRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKS---LNIHP 168

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N +T+N +I  +C+ G VDKA E+F ++   N  PD  TY++++ G C     +EA  L 
Sbjct: 169 NALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLL 228

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM  +G  P++V F+V++  LCK G + +A++L++ M  +G  PN  TYN L+ G CL 
Sbjct: 229 DEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLK 288

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            K++ A  L   M SN C+ + V++ TLIN +       +   +   + ++G +     Y
Sbjct: 289 GKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVY 348

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           ++L  GL +  +  +A++L+ EM       +T  Y+  IDGLC+ G + EA      +++
Sbjct: 349 SSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKN 408

Query: 492 SKYELNIVSYNCLIDG 507
             Y  N  +Y+ L+ G
Sbjct: 409 KGYLPNSFTYSSLMRG 424



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 44/345 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M ++  + P + +FN+L   L K         L   +   G  P+  T++ 
Sbjct: 222 DEAVSLLDEM-QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNA 280

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  C  G++     +L +++ +   PN VTF +LI G   + R  +   +        
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              + + Y++LI+GLC+ G    A+ L++EM  G G     C PNT+ Y+ +IDGLC+EG
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMV-GKG-----CGPNTIVYSALIDGLCREG 394

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A+    +MK++   P+  TY+S++RG+  A D ++A  ++ EM +     + V +S
Sbjct: 395 KLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYS 454

Query: 328 VIMDELCKNGKMDKASRLLELMIWRG---------------------------------- 353
           ++++ LCK+GK  +A  + + M+ RG                                  
Sbjct: 455 ILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQ 514

Query: 354 ---VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
              V P+  TYN L++ +C+   I  A  +   M   GC  D ++
Sbjct: 515 GPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 151/347 (43%), Gaps = 65/347 (18%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ + + M+     P  V+   ++ G + + +  D    L   L + G   + Y +S L
Sbjct: 293 KAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVS-LEARGHRGNEYVYSSL 351

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G+ +    +   ++     PN + +++LI GLC E ++ EA    ++ +    
Sbjct: 352 ISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+ FTY++L+ G    G +  A+ +++EMAN N      C  N V Y+ +I+GLCK+G 
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNN------CIHNEVCYSILINGLCKDGK 465

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM------------- 315
             +A  ++ +M    I  DVV Y+S+I GFC AN   +  +LF +M+             
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525

Query: 316 ------------------------DQGVQPDVVTFSV-----------------IMDE-- 332
                                   DQG  PD +T  +                  +DE  
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELV 585

Query: 333 --LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
             L K  +   AS+++E+M+ + + P   T+  ++   C    +  A
Sbjct: 586 VRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/379 (34%), Positives = 196/379 (51%), Gaps = 9/379 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +LR  PSP  V+   ++ G  A+ +    +  + +     G+ PD YT++ +I+ +CK+G
Sbjct: 138 LLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVG 197

Query: 157 RVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVFT 214
           +V     V   +L      PNAV + +LI G C +  + E A  +    V       V T
Sbjct: 198 KVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL-EVALRYRGEMVDRGVSMTVAT 256

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YN  ++ L   G    A  L EEM    GE G+   P+  TYN +I+G CKEG   KA +
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEM----GEKGLA--PDAFTYNILINGYCKEGKEKKAMK 310

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           +F  M  + I   VVTYTS+I          E  RLF + + +G++PD+  ++ +++  C
Sbjct: 311 MFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHC 370

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
             G MD+A  ++  M  + + P+  TYNTL+ G CL  ++D AR L   M   G   D+V
Sbjct: 371 TGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLV 430

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           SYNTLI+ Y    D+++A+ +  EM+ KG  PT++TYN +  GL    Q   A  L  EM
Sbjct: 431 SYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490

Query: 455 RRNHVAADTYTYNNFIDGL 473
             N +  D  TY + I+GL
Sbjct: 491 VGNGITPDDSTYISLIEGL 509



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 185/381 (48%), Gaps = 19/381 (4%)

Query: 138 LFPDIY---------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF DI+         T +I++   C  G+          +LR   +PNAVT+ ++I G C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRAL----ELLRQMPSPNAVTYNTVIAGFC 158

Query: 189 AESRIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           A  R+     +  + R      PD +TY T+I+G C+ G    A  +F+EM    G+   
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLT-EGK--- 214

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
             +PN V YN +I G C +G ++ A     +M D  ++  V TY   +          EA
Sbjct: 215 -VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEA 273

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L  EM ++G+ PD  T++++++  CK GK  KA ++ E+M+ +G+     TY +LI  
Sbjct: 274 HALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHA 333

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
             +   +    +LF      G   D+  YN LIN +C   D++ A  +  EM  K I P 
Sbjct: 334 LSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPD 393

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            VTYNTL  GL  + +++ A  L +EM +  +  D  +YN  I G    G + +A+++  
Sbjct: 394 DVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRD 453

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +    +   +++YN +I GL
Sbjct: 454 EMMGKGFNPTLLTYNAMIKGL 474



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 19/429 (4%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           + P  A  +F  + R+   P   ++FNI+   L         L L +++ S    P+  T
Sbjct: 95  LPPAPAFVLFADIFRLR-LPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVT 149

Query: 145 HSILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALF--- 200
           ++ +I  FC  GRV  G  ++  +  R    P+  T+ ++I G C   ++ +A  +F   
Sbjct: 150 YNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEM 209

Query: 201 -TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
            T+ +V   EP+   YN LI G C  G+  VAL    EM +      V       TYN  
Sbjct: 210 LTEGKV---EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVA------TYNLF 260

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +  L  EG   +A  L  +M ++ + PD  TY  +I G+C      +A ++F  M+ +G+
Sbjct: 261 VHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +  VVT++ ++  L   G + +  RL    + RG+ P+ + YN LI+ +C    +D A +
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFE 380

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +   ME      D V+YNTL+   C    ++EA  L  EM  +GI+P +V+YNTL  G  
Sbjct: 381 IMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYS 440

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
               ++ A+K+ DEM          TYN  I GLC +G   +A +L + +  +    +  
Sbjct: 441 MKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDS 500

Query: 500 SYNCLIDGL 508
           +Y  LI+GL
Sbjct: 501 TYISLIEGL 509



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 139/271 (51%), Gaps = 14/271 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF---- 162
           V+++N+    L          +L + +   GL PD +T++ILIN +CK G+         
Sbjct: 254 VATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFE 313

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           V++G+ +R+      VT+TSLI  L  +  + E   LF         PD+F YN LIN  
Sbjct: 314 VMVGKGIRA----TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSH 369

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C  G    A  +  EM            P+ VTYNT++ GLC  G +D+A+ L  +M   
Sbjct: 370 CTGGDMDRAFEIMGEMEKKR------ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKR 423

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            I PD+V+Y ++I G+    D  +A ++  EMM +G  P ++T++ ++  LC NG+   A
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDA 483

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
             L++ M+  G+ P+  TY +LI+G    D+
Sbjct: 484 EDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A  I   M +   +P  V+ +N L   L      D    L + +   G+ PD+ +++ 
Sbjct: 376 DRAFEIMGEMEKKRITPDDVT-YNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ +   G +     V   ++   F P  +T+ ++IKGLC   +  +A  L  +     
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 208 CEPDVFTYNTLINGLCRTGHTIVA 231
             PD  TY +LI GL      + A
Sbjct: 495 ITPDDSTYISLIEGLTTEDERLAA 518


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 186/336 (55%), Gaps = 6/336 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           ++  + +   GL PD   ++++I  FC+ G +S    V   ++     P+ VT+ +L+ G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC E R+++A  L  + R     PD+ T+ TLI+G C  G    AL LF+ M N      
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR---- 116

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              +P+ VTYNT+IDG+C++G +DKA +L+  M    I P+ VTY+ +I   C      +
Sbjct: 117 --LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 174

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A     EM+++G+ P+++T++ I+   C++G + K  + L+ M+   V+P+  TYNTLI 
Sbjct: 175 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 234

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GY   DK+  A KL   ME      DVV+YN LIN +  + +V+EA  ++ +M +KGI+P
Sbjct: 235 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 294

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
              TY ++  G       + A +L DEM +   A D
Sbjct: 295 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/317 (35%), Positives = 178/317 (56%), Gaps = 10/317 (3%)

Query: 172 CF--TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           CF   P+ V +T +I G C    + +A  +  +     C PDV TYNTL+NGLC+    +
Sbjct: 9   CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 68

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L  EM     E GV   P+  T+ T+I G C EG +DKA +LF  M ++ + PD+V
Sbjct: 69  DAEGLLNEMR----ERGV--PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I G C   D ++A  L+ +M  + + P+ VT+S+++D  C+ G+++ A   L+ M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I +G+ PN  TYN++I GYC +  +   +K    M  N    D+++YNTLI+ Y K   +
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAADTYTYNN 468
            +A  L + M  + ++P VVTYN L  G F +H  V+ A  +F++M    +  D YTY +
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLING-FSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 301

Query: 469 FIDGLCKSGFVLEALEL 485
            I+G   +G   EA +L
Sbjct: 302 MINGHVTAGNSKEAFQL 318



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 172/310 (55%), Gaps = 6/310 (1%)

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
           A   + R F   PD   Y  +I G CR G    AL + +EM       G  C P+ VTYN
Sbjct: 2   AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV------GCGCLPDVVTYN 55

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T+++GLCKE  +  A+ L  +M++  + PD+ T+T++I G+C     ++A +LF  M++Q
Sbjct: 56  TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 115

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            ++PD+VT++ ++D +C+ G +DKA+ L + M  R + PN  TY+ LID +C   +++ A
Sbjct: 116 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 175

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
                 M + G + ++++YN++I  YC++ +V +      +M+   + P ++TYNTL  G
Sbjct: 176 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
             +  ++  A KL + M +  V  D  TYN  I+G    G V EA  +F  +     E +
Sbjct: 236 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 295

Query: 498 IVSYNCLIDG 507
             +Y  +I+G
Sbjct: 296 RYTYMSMING 305



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 144/284 (50%), Gaps = 6/284 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K +       L   +   G+ PD+ T + LI+ +C  G++     +
Sbjct: 49  PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 108

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+ VT+ +LI G+C +  + +A  L+         P+  TY+ LI+  C 
Sbjct: 109 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 168

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A    +EM N     G++  PN +TYN+II G C+ G V K ++   KM    +
Sbjct: 169 KGQVEDAFGFLDEMINK----GIL--PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD++TY ++I G+   +  ++A +L   M  + VQPDVVT++++++    +G + +A  
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           + E M  +G+ P+ YTY ++I+G+        A +L   M   G
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 7/235 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +FD ML     P  V+ +N L   + +    D    L+  ++S  +FP+  T+SI
Sbjct: 103 DKALQLFDTMLNQRLRPDIVT-YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 161

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C+ G+V   F  L  ++     PN +T+ S+IKG C    + +      K  V  
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ TYNTLI+G  +      A  L   M           +P+ VTYN +I+G    G
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK------VQPDVVTYNMLINGFSVHG 275

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            V +A  +F KM  + I PD  TY S+I G   A +  EA +L  EM+ +G  PD
Sbjct: 276 NVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 6/260 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R    PP + +F  L          D  L LF  + +  L PDI T++ LI+  C+ G 
Sbjct: 77  MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +   +      PN VT++ LI   C + ++ +A     +       P++ TYN+
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           +I G CR+G+        ++M            P+ +TYNT+I G  KE  +  A +L  
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNK------VSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+ E + PDVVTY  +I GF    +  EA  +F +M  +G++PD  T+  +++     G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310

Query: 338 KMDKASRLLELMIWRGVNPN 357
              +A +L + M+ RG  P+
Sbjct: 311 NSKEAFQLHDEMLQRGFAPD 330



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%)

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   G + D V Y  +I  +C+   + +AL +  EM+  G  P VVTYNTL  GL +  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++  A  L +EMR   V  D  T+   I G C  G + +AL+LF  + + +   +IV+YN
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 503 CLIDGL 508
            LIDG+
Sbjct: 126 TLIDGM 131


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 196/398 (49%), Gaps = 8/398 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D ML      P V ++NIL     K + Y   + L   + + G  P+  T+++L
Sbjct: 25  DALSVLDDML-CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 83

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  C  G V     +L  +      P+ V + +++KGLC+  R  +A  L T+     C
Sbjct: 84  MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 143

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T+N +I  LCR G    A+ L E+M+         C  N VTYN II+GLC++  
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG------CTANIVTYNAIINGLCEQRN 197

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A  L  KMK     PD+VTY ++++G C A  W +A+ L   M   G  PD VTF+ 
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+ G M  A  + + M  +G  PN+ TY+T+I G     K+D A +LF  M   G
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D + Y  L      +  +EEA+    ++   GI P  V YN + LGL    + E A+
Sbjct: 318 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +   M  +    D  TY   I+GL   G++ EA EL 
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 188/369 (50%), Gaps = 7/369 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+ YT++ LI+  C+ G+V     VL  +L     P+ VT+  L++  C      +A  L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               R   C P+  TYN L++G+C  G    AL L   + +        CKP+TV YNT+
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG------CKPSTVNYNTV 118

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           + GLC       A EL  +M  EN  P+  T+  VI   C      +A +L  +M   G 
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
             ++VT++ I++ LC+   +D A  LL  M   G  P+  TYNTL+ G C   +   A +
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L  +M  NGC+ D V++NTLI + C+   + +A+ ++ +M  KG  P  +TY+T+  GL 
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  ++++AL+LF+EM       D   Y    + L     + EA++  R ++DS    + V
Sbjct: 299 KATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357

Query: 500 SYNCLIDGL 508
            YN ++ GL
Sbjct: 358 LYNAILLGL 366



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 6/300 (2%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P+ +TYN LI+ LC  G    AL++ ++M          C P+ VTYN +++  CK   
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTYNILLEATCKGRG 57

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +A EL   M+ E   P+ VTY  ++ G C   D ++A  L   +   G +P  V ++ 
Sbjct: 58  YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC   +   A  L+  M+     PN  T+N +I   C    +  A +L   M  +G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  ++V+YN +IN  C+ ++V+ A+ L S+M S G KP +VTYNTL  GL    +   A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L D M +N    D  T+N  I  LC+ G +++A+E+F+ + D     N ++Y+ +I GL
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 175/347 (50%), Gaps = 13/347 (3%)

Query: 78  GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           G+GD++     +AL +    L  H   P   ++N +   L   + +     L   +    
Sbjct: 89  GEGDVD-----DALELLRN-LPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 142

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
             P+  T +++I   C+ G +     +L ++ +   T N VT+ ++I GLC +  +  A 
Sbjct: 143 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAM 202

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            L +K + + C+PD+ TYNTL+ GLC     + A  L + M   NG     C P+ VT+N
Sbjct: 203 GLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ-NG-----CLPDNVTFN 256

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T+I  LC++G +  A E+F +M D+   P+ +TY+++I G   A   ++A  LF EM  +
Sbjct: 257 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 316

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  PD + + ++ + L  +  +++A + +  +   G++P+T  YN ++ G C   K + A
Sbjct: 317 GFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 375

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
             +   M S+GCM D ++Y  LI        + EA  L  ++ S+ +
Sbjct: 376 IDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 169/333 (50%), Gaps = 23/333 (6%)

Query: 69  FLKERCKSSGQGDIN-LITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVL 127
            LK  C +   GD + L+T          MLR +  PP  ++FN++   L +       +
Sbjct: 118 VLKGLCSAERWGDADELVTE---------MLREN-CPPNEATFNVVIYSLCRKGLLQQAI 167

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
            L ++++  G   +I T++ +IN  C+   V     +L ++      P+ VT+ +L+KGL
Sbjct: 168 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 227

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C+ +R ++A  L        C PD  T+NTLI  LC+ G  + A+ +F++M +       
Sbjct: 228 CSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG----- 282

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C PN++TY+TII GL K   +D+A ELF +M  +  NPD + Y  +       +   EA
Sbjct: 283 -CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEA 340

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            +   ++ D G+ P  V ++ I+  LC+NGK + A  ++  M+  G  P+  TY  LI+G
Sbjct: 341 IQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEG 400

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
                 ++ AR+L + +    C  DV+  N+LI
Sbjct: 401 LAYEGYLNEARELLIKL----CSRDVL-VNSLI 428



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 121/225 (53%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+  TY  +I   C      +A  +  +M+ +G  PDVVT++++++  CK     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L++LM   G  PN  TYN L+DG C    +D A +L  ++ S+GC    V+YNT++   
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C  +   +A  L +EML +   P   T+N +   L     +++A++L ++M ++   A+ 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  I+GLC+   V  A+ L   ++    + +IV+YN L+ GL
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 227


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 219/440 (49%), Gaps = 43/440 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++  L   L K+   D   +L +++  AG  P++ T++ LI+  CK  R       + 
Sbjct: 10  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 69

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+LRS   P+ VT+ SLI GLC  +R+ +A  +  +       P+  TY+TL+   CR  
Sbjct: 70  RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRR 129

Query: 227 HTIVALNLFEEMANGNGEFGVVCK-----------------------------------P 251
               A  L  EM       G VC                                    P
Sbjct: 130 RLDQARGLIREMI----LRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP 185

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           + VTYNT I GLCK G +DK  E+  +M    I PDVVT+ S+I G C AN  ++A ++F
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM--IWRGVNPNTYTYNTLIDGYC 369
             M+++G  PD +T+S+++D L +  ++D    +LE M  +  G     YT+N  I   C
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTV 428
            + K   A+ + + M  +G + +++SYN +I+  CK+ +V++A  L  +ML  G  KP V
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           + +NTL  G  +  ++ +A +L  EM+ +N    D  TYN  IDG  K G + +A  L +
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQ 425

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            ++    + N+V+Y  LI+G
Sbjct: 426 EMQAVGCKPNVVTYAALING 445



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 194/377 (51%), Gaps = 8/377 (2%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           +G  PD+ T++  I+  CK G++  G  +L  + R    P+ VTF S+I GLC  +RI +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  +F       C PD  TY+ +++ L R         + E M          C     T
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQ----AMKAGCVMEVYT 296

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +N  I  LC+ G    AK + L M +    P++++Y  VI G C + + ++A +L  +M+
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 316 DQGV-QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN-PNTYTYNTLIDGYCLTDK 373
           D G  +PDV+ F+ ++   CK G++ +A +LL  M  + +  P+  TYNTLIDG      
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A+ L   M++ GC  +VV+Y  LIN Y K+   EEA SL+ EM +KG  P ++TYNT
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476

Query: 434 LFLGLFEIHQVERALKLFDEMRR--NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           +     +   + +A  ++ +++   ++ + D  TY   IDG C++    + L L + +  
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536

Query: 492 SKYELNIVSYNCLIDGL 508
             +  +  +YN LI  L
Sbjct: 537 RGWSCDSYTYNVLIAKL 553



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 200/395 (50%), Gaps = 13/395 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N     L K    D  L + + ++  G+ PD+ T   +I+  CK  R+   F V
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDVFTYNTLINGL 222
              +L     P+++T++ ++  L   +R+     +    +     C  +V+T+N  I  L
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR+G   +A N+   M     E G +  PN ++YN +IDGLCK G VD A +L  KM D 
Sbjct: 305 CRSGKFPLAKNILLGMI----ESGSL--PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 283 NI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV-QPDVVTFSVIMDELCKNGKMD 340
               PDV+ + ++I GFC A   ++A +L IEM  + +  PDVVT++ ++D   K G + 
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLK 418

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  LL+ M   G  PN  TY  LI+GY      + A  LF  M + GC  D+++YNT++
Sbjct: 419 QAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVL 478

Query: 401 NWYCKNKDVEEALSLYSEMLSKG--IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           + + K   + +A  +Y ++ +K     P  +TY  L  G       E+ L L  EM    
Sbjct: 479 SAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARG 538

Query: 459 VAADTYTYNNFIDGLCKSGFV-LEALELFRAIRDS 492
            + D+YTYN  I  L ++  V  +AL +++ + D 
Sbjct: 539 WSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQ 573



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 187/373 (50%), Gaps = 12/373 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS--AGLFPDIYTH 145
           ++A  +F  ML     P  ++ ++I+   L++    DTV  + + + +  AG   ++YTH
Sbjct: 239 DDAFQVFKGMLERGCVPDSLT-YSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-R 204
           +  I   C+ G+      +L  ++ S   PN +++  +I GLC    + +A  L  K   
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C+PDV  +NTLI+G C+ G    A  L  EM   N     +C P+ VTYNT+IDG  
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKN-----ICVPDVVTYNTLIDGQS 412

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G + +AK L  +M+     P+VVTY ++I G+     + EA+ LF EM  +G  PD++
Sbjct: 413 KFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDII 472

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           T++ ++    K G M KA  + + +  +    +P+  TY  LIDGYC  +  +    L  
Sbjct: 473 TYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQ 532

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDV-EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            M + G   D  +YN LI    + ++V  +AL++Y +ML +   P+   +N+L       
Sbjct: 533 EMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRT 592

Query: 442 HQVERALKLFDEM 454
             V  A  +  EM
Sbjct: 593 GDVNSARSMVQEM 605



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 194/397 (48%), Gaps = 11/397 (2%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V +F  +   L K    D    +FK +   G  PD  T+SI+++   +  R+     
Sbjct: 219 PPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDE 278

Query: 164 VLGRI--LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           VL  +  +++       T  + I  LC   +   A  +          P++ +YN +I+G
Sbjct: 279 VLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG 338

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC++G+   A  L  +M +        CKP+ + +NT+I G CK G + +A +L ++MK 
Sbjct: 339 LCKSGNVDDAWKLSRKMLDSG-----CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKA 393

Query: 282 ENIN-PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +NI  PDVVTY ++I G        +AK L  EM   G +P+VVT++ +++   K+G  +
Sbjct: 394 KNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYE 453

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG--CMHDVVSYNT 398
           +A  L + M  +G  P+  TYNT++  +     +  A  ++  +++    C  D ++Y  
Sbjct: 454 EAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRI 513

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV-ERALKLFDEMRRN 457
           LI+ YC+ +D E+ L+L  EM ++G      TYN L   L E  +V  +AL ++ +M   
Sbjct: 514 LIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQ 573

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                   +N+ +    ++G V  A  + + + +  +
Sbjct: 574 DCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGH 610



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 163/339 (48%), Gaps = 45/339 (13%)

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +  V TY TLI+GLC++G    A  L ++MA+        C PN VTY  +IDGLCK   
Sbjct: 7   DASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG------CAPNVVTYTALIDGLCKARR 60

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
              A +   +M      PD+VTY S+I G C AN  ++A  +  E++  G  P+ +T+S 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVN--------------------------------- 355
           ++   C+  ++D+A  L+  MI RG                                   
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 356 ----PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
               P+  TYNT I G C   K+D   ++   M+  G   DVV++ ++I+  CK   +++
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR--RNHVAADTYTYNNF 469
           A  ++  ML +G  P  +TY+ +   L   ++++   ++ + M+  +     + YT+N F
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I  LC+SG    A  +   + +S    N++SYN +IDGL
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGL 339


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 226/468 (48%), Gaps = 19/468 (4%)

Query: 46  PTTTSKLKESLRLTVKDRASLKK---FLKERCKSSGQGDINLITPNEALCIFDYM--LRM 100
           P   ++L  SLR  V+ R SL+     L    +S         +P  +L  F  +  LR+
Sbjct: 147 PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPS------TSPQASLDAFRSIVALRL 200

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           HP+     +FN+L             LS    +   GL PD  T++ L+N  C+ G +  
Sbjct: 201 HPN---HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 257

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L R+ +    P   T+ +L+        I +A  +         EPD++TYN L  
Sbjct: 258 ARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAA 317

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G    A  L +EM       G +  P+ VTYNT+ D   K      A  L  +M+
Sbjct: 318 GLCQAGKVDEAFRLKDEME----RLGTLL-PDVVTYNTLADACFKCRCSSDALRLLEEMR 372

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           ++ +   +VT+  VI+G C   +   A     +M D G+ PDV+T++ ++   CK G + 
Sbjct: 373 EKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIA 432

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA  L++ M+ RG+  +T+T NT++   C   + + A+ L  S    G M D VSY T++
Sbjct: 433 KAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVM 492

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
             Y K  + E AL L+ EM+ K + P++ TYNTL  GL  + +++ A+   +E+    + 
Sbjct: 493 AAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D  TYN  I   CK G +  A +    + ++ ++ ++V+ N L++GL
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGL 600



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 206/456 (45%), Gaps = 41/456 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M R+    P V ++N L     K +     L L + +   G+   + TH+I
Sbjct: 326 DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   CK G +      L ++      P+ +T+ +LI   C    I +A  L  +     
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D FT NT++  LC+      A  L +       + G +  P+ V+Y T++    KE 
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPP----QRGFM--PDEVSYGTVMAAYFKEY 499

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             + A  L+ +M ++ + P + TY ++I+G        EA     E+M++G+ PD  T++
Sbjct: 500 NSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYN 559

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+   CK G ++ A +    M+     P+  T NTL++G CL  K+D A KLF S    
Sbjct: 560 IIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEK 619

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV++YNTLI   CK+ DV+ AL  +++M ++G++P   TYN +   L E  + E A
Sbjct: 620 GKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEA 679

Query: 448 LKLFDEMRRNHVAADTYT-----------------------------------YNNFIDG 472
             +  ++  +   + +++                                   Y   ++G
Sbjct: 680 QNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNG 739

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LC SG   EA  +   +      ++  +Y  L++GL
Sbjct: 740 LCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 7/389 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSILINCFCKMGRVSHGFV 163
           P + ++N+L   L +    D    L   +   G L PD+ T++ L +   K    S    
Sbjct: 307 PDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALR 366

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +         VT   +IKGLC +  +  A     K       PDV TYNTLI+  C
Sbjct: 367 LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHC 426

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+   A  L +EM           K +T T NT++  LCKE   ++A+ L        
Sbjct: 427 KAGNIAKAYTLMDEMVRRG------LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRG 480

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD V+Y +V+  +    +   A RL+ EM+++ + P + T++ ++  L + G++ +A 
Sbjct: 481 FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAI 540

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L  ++ +G+ P+  TYN +I  YC    +++A +    M  N    DVV+ NTL+N  
Sbjct: 541 DKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGL 600

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C N  +++AL L+   + KG K  V+TYNTL   + +   V+ AL  F +M    +  D 
Sbjct: 601 CLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDA 660

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +TYN  +  L ++G   EA  +   + +S
Sbjct: 661 FTYNVVLSALSEAGRTEEAQNMLHKLAES 689



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 183/402 (45%), Gaps = 41/402 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+   L K+   +  L    ++   GL PD+ T++ LI+  CK G ++  + ++  +
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +R     +  T  +++  LC E R  EA  L          PD  +Y T++    +  ++
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L++EM            P+  TYNT+I GL + G + +A +   ++ ++ + PD 
Sbjct: 502 EPALRLWDEMIEKK------LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDD 555

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY  +I  +C   D   A +   +M++   +PDVVT + +M+ LC NGK+DKA +L E 
Sbjct: 556 TTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFES 615

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            + +G   +  TYNTLI   C    +D A   F  ME+ G   D  +YN +++   +   
Sbjct: 616 WVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 675

Query: 409 VEEALSLYSEMLSKG----------IKPTVV-------------------------TYNT 433
            EEA ++  ++   G          +KP+ V                          Y  
Sbjct: 676 TEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTK 735

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           L  GL    Q + A  + DEM +  ++ D+ TY   ++GL K
Sbjct: 736 LVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 44/285 (15%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL ++D M+    +P  +S++N L   L++       +     L   GL PD  T++I+I
Sbjct: 504 ALRLWDEMIEKKLTPS-ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIII 562

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +CK G + + F    +++ + F P+ VT  +L+ GLC   ++ +A  LF        +
Sbjct: 563 HAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKK 622

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            DV TYNTLI  +C+ G    AL+ F +M A G        +P+  TYN ++  L + G 
Sbjct: 623 VDVITYNTLIQTMCKDGDVDTALHFFADMEARG-------LQPDAFTYNVVLSALSEAGR 675

Query: 269 VDKAKELFLKM--------------------------KDENINPDVV---------TYTS 293
            ++A+ +  K+                          KD     + V          YT 
Sbjct: 676 TEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTK 735

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           ++ G C +  + EAK +  EMM +G+  D  T+  +M+ L K  K
Sbjct: 736 LVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 199/383 (51%), Gaps = 11/383 (2%)

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           + ++S    PD +T++ LI   C  G V     V   +L    +P+ VT++ L+   C E
Sbjct: 149 RMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKE 208

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           S   +A  L  + R   CEPD+ TYN LIN +C  G    AL +   + +    +G  CK
Sbjct: 209 SGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPS----YG--CK 262

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ VTY  ++  LC     ++A +L  KM   +  PD VT+ +VI   C       A ++
Sbjct: 263 PDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKV 322

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL-EL---MIWRGVNPNTYTYNTLID 366
             +M + G  PD++T+S IMD LCK  ++D+A +LL EL   M+ +   P+  T+NT+I 
Sbjct: 323 LAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIIT 382

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY-CKNKDVEEALSLYSEMLSKGIK 425
             C     D A K+   M  +GC+ D+ +YN +++ + CK+   EEAL L + M+S G+ 
Sbjct: 383 SLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLC 442

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P   TY +L  GL    ++ERA+ +F  ++   ++ D   YN  + GLCK      A++ 
Sbjct: 443 PDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDF 502

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           F  +  +    +  +Y  L++G+
Sbjct: 503 FAYMVSNGCMPDESTYIILVEGI 525



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 205/419 (48%), Gaps = 23/419 (5%)

Query: 99  RMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           R  P PP  S    N     L +    D  L L   ++ +G  P +   +ILI   C  G
Sbjct: 51  RTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADG 110

Query: 157 RVSHGFVVLGRILRSCFTPNA--VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
           RV+    V+         P+A  +T+ +++ G C    I +AA        FA  PD FT
Sbjct: 111 RVADAERVV-----EALGPSATIITYNTMVNGYCRAGNI-DAARRMIDSVPFA--PDTFT 162

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YN LI  LC  G  + AL +F++M +        C P+ VTY+ ++D  CKE    +A  
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRG------CSPSVVTYSILLDATCKESGYKQAVV 216

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L  +M+ +   PD+VTY  +I   C   D  EA ++   +   G +PD VT++ ++  LC
Sbjct: 217 LLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLC 276

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
            + + ++A +LL  M      P+  T+N +I   C    +  A K+   M  +GC  D++
Sbjct: 277 SSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDII 336

Query: 395 SYNTLINWYCKNKDVEEAL----SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           +Y+++++  CK + V+EA+     L +EM+SK   P  VT+NT+   L +    +RA+K+
Sbjct: 337 TYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKV 396

Query: 451 FDEMRRNHVAADTYTYNNFIDG-LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            DEM  +    D  TYN  +DG LCKS    EAL+L   +  +    +  +Y  L  GL
Sbjct: 397 VDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL 455



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 194/371 (52%), Gaps = 12/371 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD ML    SP  V +++IL     K   Y   + L   + S G  PDI T+++L
Sbjct: 178 DALAVFDDMLHRGCSPS-VVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVL 236

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  C  G V     VL  +      P+AVT+T ++K LC+  R  EA  L TK     C
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+N +I  LC+ G    A  +  +M+    E G  C P+ +TY++I+DGLCKE  
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMS----EHG--CTPDIITYSSIMDGLCKERR 350

Query: 269 VDKA----KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           VD+A    KEL  +M  +N  PD VT+ ++I   C    ++ A ++  EM + G  PD+ 
Sbjct: 351 VDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDIT 410

Query: 325 TFSVIMDE-LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           T++ I+D  LCK+ K ++A  LL LM+  G+ P+T TY +L  G    D+++ A  +F  
Sbjct: 411 TYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRR 470

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           +++ G   D + YN ++   CK    + A+  ++ M+S G  P   TY  L  G+     
Sbjct: 471 VQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGF 530

Query: 444 VERALKLFDEM 454
           +E A +L   +
Sbjct: 531 LEEAKELLGNL 541



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 194/395 (49%), Gaps = 11/395 (2%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+   P  P   ++N L   L         L++F  +   G  P + T+SIL++  CK  
Sbjct: 150 MIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKES 209

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
                 V+L  +      P+ VT+  LI  +C++  + EA  +      + C+PD  TY 
Sbjct: 210 GYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYT 269

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            ++  LC +     A  L  +M      F   C P+ VT+N +I  LC++GFV +A ++ 
Sbjct: 270 PVLKSLCSSERWEEADKLLTKM------FSNDCAPDEVTFNAVITSLCQKGFVGRATKVL 323

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEA----KRLFIEMMDQGVQPDVVTFSVIMDE 332
            +M +    PD++TY+S++ G C     +EA    K L  EM+ +   PD VTF+ I+  
Sbjct: 324 AQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITS 383

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY-CLTDKIDHARKLFVSMESNGCMH 391
           LC+ G  D+A ++++ M   G  P+  TYN ++DG+ C + K + A  L   M SNG   
Sbjct: 384 LCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCP 443

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D  +Y +L     +  ++E A+ ++  + + G+ P  + YN + LGL +  + + A+  F
Sbjct: 444 DTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFF 503

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             M  N    D  TY   ++G+   GF+ EA EL 
Sbjct: 504 AYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 168/286 (58%), Gaps = 6/286 (2%)

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A+ L +EM N         KP+ VTYN +I+G+CKEG +D+A +    M   
Sbjct: 93  CKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 146

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              P+V+T+  ++R  C    W +A++L  +M+ +G  P VVTF+++++ LC+ G + +A
Sbjct: 147 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 206

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +LE M   G  PN+ +YN L+ G+C   K+D A +    M S GC  D+V+YNTL+  
Sbjct: 207 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 266

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK+  V+ A+ + +++ SKG  P ++TYNT+  GL ++ + ERA+KL DEMRR  +  D
Sbjct: 267 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 326

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY++ + GL + G V EA++ F  +       N ++YN ++ GL
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 372



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 179/359 (49%), Gaps = 8/359 (2%)

Query: 133 LNSAGLFP--DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           +N   LFP   +   S  +   CK   V     +L  +      P+ VT+  LI G+C E
Sbjct: 71  INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
            R+ EA         + C+P+V T+N ++  +C TG  + A  L  +M          C 
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG------CS 184

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ VT+N +I+ LC++G + +A ++  KM      P+ ++Y  ++ GFC     + A   
Sbjct: 185 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 244

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
              M+ +G  PD+VT++ ++  LCK+GK+D A  +L  +  +G +P   TYNT+IDG   
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K + A KL   M   G   D+++Y++L++   +   V+EA+  + ++   GI+P  +T
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           YN++ LGL +  Q +RA+     M          TY   I+G+   G   EAL+L   +
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 177/348 (50%), Gaps = 6/348 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +S F+       K       + L   + + G  PD+ T+++LIN  CK GR+      L 
Sbjct: 82  LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN +T   +++ +C+  R M+A  L +      C P V T+N LIN LCR G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+++ E+M          C PN+++YN ++ G CKE  +D+A E    M      P
Sbjct: 202 LLGRAIDILEKMPMHG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 255

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTY +++   C     + A  +  ++  +G  P ++T++ ++D L K GK ++A +LL
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  +G+ P+  TY++L+ G     K+D A K F  +E  G   + ++YN+++   CK+
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +  + A+   + M+SK  KPT  TY  L  G+      + AL L +E+
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 176/356 (49%), Gaps = 15/356 (4%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
           +++  CK SG G        +A+ + D M R   S P V ++N+L   + K    D  + 
Sbjct: 88  YVQTTCKESGVG--------QAMKLLDEM-RNKGSKPDVVTYNVLINGICKEGRLDEAIK 138

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
               + S G  P++ TH+I++   C  GR      +L  +LR   +P+ VTF  LI  LC
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +  +  A  +  K  +  C P+  +YN L++G C+      A+   + M +        
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG------ 252

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+ VTYNT++  LCK+G VD A E+  ++  +  +P ++TY +VI G         A 
Sbjct: 253 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 312

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L  EM  +G++PD++T+S ++  L + GK+D+A +    +   G+ PN  TYN+++ G 
Sbjct: 313 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 372

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           C + + D A      M S  C     +Y  LI         +EAL L +E+ S+G+
Sbjct: 373 CKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 217/418 (51%), Gaps = 10/418 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+C+F+ M       P V ++N L     +       L+LF R+  AG+ P I T++ L
Sbjct: 385 DAVCLFEEM--ADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSL 442

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  +CK G +     +   +    F PN VT+ +L++G  A+     A AL  + +    
Sbjct: 443 LMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             + +TYN LING+C          + +  M+ G         P  +TYN+II+G  K G
Sbjct: 503 SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG-------FIPTMMTYNSIINGFVKAG 555

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A  ++ +M+++ + P+++TYTS I G+C     + A ++  ++  +G+QPD+V ++
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  C+ G M  A +LL +++  G+ PNT  YN+LI GY   + +    K + SM   
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D  +Y TLI+ + K+ +V  AL LYSEM++KG  P   T+  L  GL     ++ A
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGA 735

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            KL +EMRR  V  + + YN  I+G  +   + EA  L   + +   + +  +Y+ L+
Sbjct: 736 KKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 198/418 (47%), Gaps = 42/418 (10%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
            L+LFK     G+ P    + +LI    ++G     + +  ++      P+    + ++K
Sbjct: 316 ALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLK 375

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           GL  + R  +A  LF +    +  PDVFTYN LI+  C+      ALNLF+ M       
Sbjct: 376 GLLNDRRWKDAVCLF-EEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG--- 431

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
               KP+  TYN+++ G CK+G +D+A +L+ +M  E   P+VVTY +++RG+    D++
Sbjct: 432 ---VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFD 488

Query: 306 EAKRLFIEM-----------------------------------MDQGVQPDVVTFSVIM 330
            A  L  EM                                   M +G  P ++T++ I+
Sbjct: 489 NAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSII 548

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           +   K G M  A  + + M  +G+ PN  TY + IDGYC T   D A K+   +   G  
Sbjct: 549 NGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQ 608

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D+V+YN LIN +C+  ++  AL L   +L  G+ P  V YN+L  G   ++ ++   K 
Sbjct: 609 PDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKF 668

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ M +  + ADT TY   IDG  K G V  ALEL+  +    Y  +  ++  L  GL
Sbjct: 669 YESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 186/399 (46%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  +   L K    +  L +   +  AG   D+   + L+  +C    V +   +    
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L+    P  V +  LI+G        +A  L  +       P  F  + ++ GL      
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ LFEEMA+          P+  TYN +I   C+   + +A  LF +MK   + P +
Sbjct: 384 KDAVCLFEEMADSG-------LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSI 436

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY S++ G+C     +EA +L+ EM  +G +P+VVT+  +M         D A  LL+ 
Sbjct: 437 NTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDE 496

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   GV+ N YTYN LI+G C+ D++     +  S  S G +  +++YN++IN + K   
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  A ++Y +M  KG+ P ++TY +   G       + ALK+ +++RR  +  D   YN 
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I+G C+ G +  AL+L   +       N V YN LI G
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITG 655



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 192/431 (44%), Gaps = 43/431 (9%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++  CL +  H D V  LF  +  A + PD   +++ I   CK+G       +L  +   
Sbjct: 198 LMSACLKEGMHEDAV-RLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
            F     T+ +++  L    R+ EA  +  + R    + DV    TL+ G C       A
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE----------------- 274
           LNLF+E        G+V  P  V Y  +I G  + G   KA E                 
Sbjct: 317 LNLFKETLKD----GIV--PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFEL 370

Query: 275 ------------------LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
                             LF +M D  + PDV TY ++I   C A+   EA  LF  M  
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV+P + T++ ++   CK G MD+A +L   M   G  PN  TY TL+ GY      D+
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN 489

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  L   M+ NG   +  +YN LIN  C    V E   +    +S+G  PT++TYN++  
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIIN 549

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  +   +  A  ++ +MR   +  +  TY +FIDG C++G    AL++   +R    + 
Sbjct: 550 GFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQP 609

Query: 497 NIVSYNCLIDG 507
           +IV+YN LI+G
Sbjct: 610 DIVAYNALING 620



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 183/413 (44%), Gaps = 42/413 (10%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           +  + + G+ PDI + + L+    +         +   +    +  +A  F +L+     
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV-V 248
           E    +A  LF +      +PD   Y   I  LC+ G    AL +  EM     E G   
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK----EVGFDT 260

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C     TY T++D L K G +++A  +  +M+D     DV+  T+++RG+C   +   A 
Sbjct: 261 CD---FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL 317

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT---------- 358
            LF E +  G+ P  V + V++    + G   KA  L   M  +G+ P+T          
Sbjct: 318 NLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL 377

Query: 359 ------------------------YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
                                   +TYN LI  +C   K+  A  LF  M+  G    + 
Sbjct: 378 LNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +YN+L+  YCK   ++EA+ LYSEM  +G KP VVTY TL  G       + A  L DEM
Sbjct: 438 TYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++N V+ + YTYN  I+G+C    V E   + ++     +   +++YN +I+G
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 137/293 (46%), Gaps = 6/293 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N+L   +        V  + K   S G  P + T++ +IN F K G +   F V  ++
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN +T+TS I G C       A  +    R    +PD+  YN LING C+ G+ 
Sbjct: 568 REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNM 627

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L   +            PNTV YN++I G      + +  + +  M    I  D 
Sbjct: 628 SHALQLLVILLKDG------LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADT 681

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT++I GF    +   A  L+ EMM +G  PD  TF+ +   LC++G +D A +LLE 
Sbjct: 682 STYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEE 741

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           M    V PN + YN LI+GY    K+  A +L   M + G   D  +Y+ L++
Sbjct: 742 MRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 6/235 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R    PP + ++        +    D  L +   +   GL PDI  ++ LIN FC+ G 
Sbjct: 567 MREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +SH   +L  +L+    PN V + SLI G    + + E +  +          D  TY T
Sbjct: 627 MSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTT 686

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+G  + G+   AL L+ EM       G +  P+  T+  +  GLC+ G +D AK+L  
Sbjct: 687 LIDGFSKDGNVAFALELYSEMMAK----GYI--PDAFTFTALTHGLCRSGDIDGAKKLLE 740

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           +M+  ++ P+V  Y  +I G+       EA RL  EM++ G+QPD  T+ +++ +
Sbjct: 741 EMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 5/240 (2%)

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A + +  M    + PD+ + T ++      +   +A  LF+EM  +G + D   F  +M 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
              K G  + A RL + M    ++P+   Y   I   C       A ++   M+  G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
              +Y T+++   K   +EEAL +  EM   G K  V+   TL  G     +V  AL LF
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR-----AIRDSKYELNIVSYNCLID 506
            E  ++ +      Y   I G  + G   +A EL R      +  S +EL++V    L D
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%)

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A   +  M + G + D+ S   L+    +    ++AL+L+ EM  +G +     ++ L  
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
              +    E A++LFDEM    +  D   Y   I  LCK G    AL + R +++  ++ 
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 497 NIVSYNCLIDGL 508
              +Y  ++D L
Sbjct: 261 CDFTYRTMVDVL 272


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 196/385 (50%), Gaps = 16/385 (4%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           T+ + +  +   G  P +  ++ILIN FCK G +    ++   I +    P  V+F +LI
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265

Query: 185 KGLCAESRIMEAAAL---FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            GLC    + E   L     ++R++   PDVFTY+ LI+GLC+ G   VA  LF+EM   
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIY---PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   +PN +T+  +IDG C+   +D A   + +M    + PD+V Y +++ G C  
Sbjct: 323 G------LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
            D N+A++L  EM   G++PD +T++ ++D  CK G ++ A  + + M   GV  +   +
Sbjct: 377 GDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             LI G+C   ++  A +    M   G   D  +Y  +I+ YCK  +V+    L  EM  
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G KP V+TYN L  GL +  Q++ A  L + M    V  D  TYN  ++G CK+G   +
Sbjct: 497 NGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED 556

Query: 482 ALELFRA---IRDSKYELNIVS-YN 502
            L+L      I D  Y  ++VS YN
Sbjct: 557 LLKLRNEKGLIVDYAYYTSLVSEYN 581



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 177/330 (53%), Gaps = 9/330 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   SFN L   L K+++ D    L K +    ++PD++T+S+LI+  CK GR+     +
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    PN +TFT+LI G C   RI  A   + +      +PD+  YNTL+NGLC+
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM        V  KP+ +TY T+IDG CKEG ++ A E+   M +E +
Sbjct: 376 VGDVNKARKLVDEMRM------VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V +T++I GFC      +A+R   EM++ G++PD  T+++++D  CK G +    +
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G  P   TYN L++G C   ++ +A  L  +M + G   D ++YN L+  +C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           KN   E+ L L +E   KG+      Y +L
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVDYAYYTSL 576



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 180/350 (51%), Gaps = 6/350 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V  +NIL     K         +F  +   GL P   + + LIN  CK   +  GF 
Sbjct: 220 PPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFR 279

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +  +   P+  T++ LI GLC E R+  A  LF + +     P+  T+  LI+G C
Sbjct: 280 LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQC 339

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R+     A+N + +M       GV  KP+ V YNT+++GLCK G V+KA++L  +M+   
Sbjct: 340 RSRRIDSAMNTYHQMLT----MGV--KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD +TYT++I G+C   D   A  +   M ++GV  D V F+ ++   C++G++  A 
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R L  M+  G+ P+  TY  +IDGYC    +    KL   M+ NG    V++YN L+N  
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           CK   ++ A  L   ML+ G+ P  +TYN L  G  +  + E  LKL +E
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 180/340 (52%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           IL   F P    +  LI   C E  I +A  +F + R     P   ++NTLINGLC++ +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L + M            P+  TY+ +I GLCKEG +D A++LF +M+   + P+
Sbjct: 274 LDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            +T+T++I G C +   + A   + +M+  GV+PD+V ++ +++ LCK G ++KA +L++
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+  TY TLIDGYC    ++ A ++   M   G + D V++  LI+ +C++ 
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V +A     EM+  G+KP   TY  +  G  +   V+   KL  EM+ N       TYN
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++GLCK G +  A  L  A+ +     + ++YN L++G
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 159/303 (52%), Gaps = 6/303 (1%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           +   P V  YN LIN  C+ G    A  +F E+           +P TV++NT+I+GLCK
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFNTLINGLCK 270

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+   L   M++  I PDV TY+ +I G C     + A++LF EM  +G++P+ +T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D  C++ ++D A      M+  GV P+   YNTL++G C    ++ ARKL   M 
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   D ++Y TLI+ YCK  D+E A+ +   M  +G+    V +  L  G     +V 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A +   EM    +  D  TY   IDG CK G V    +L + ++ + ++  +++YN L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 506 DGL 508
           +GL
Sbjct: 511 NGL 513



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 10/208 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  + D M RM    P   ++  L     K    ++ + + K +N  G+  D    + 
Sbjct: 380 NKARKLVDEM-RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FC+ GRV      L  ++ +   P+  T+T +I G C +  +     L  + ++  
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P V TYN L+NGLC+ G    A  L E M N     GV   P+ +TYN +++G CK G
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN----LGVT--PDDITYNILLEGHCKNG 552

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVI 295
              KA++L     ++ +  D   YTS++
Sbjct: 553 ---KAEDLLKLRNEKGLIVDYAYYTSLV 577


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 194/369 (52%), Gaps = 14/369 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           D YT+ +L+   C  G +     +L  + +     P    +   +  LC   ++ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               +  AC+PDV T+NTLI GLC+ G    A  + +EM      F      N VTYNT+
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG--FAA----NLVTYNTL 130

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-- 317
           I+GL   G   ++ E  L M+     PD  TY ++I GFC + + + A   F+E M Q  
Sbjct: 131 INGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYG-FLEEMKQRA 186

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDH 376
           G  PD  T+S++++ LCK+  + KA  LL+ MI R     +   +NTL+DGYC    +D 
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR 246

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           AR+L  SM  +GC  DVV+Y+T+I+  C+  DV++  +L  +M+S+G KP VVTY  L  
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  ++  A +L   M  +    +  TY+   DGLCK   +  A +L  +IRD     
Sbjct: 307 GLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRIT 366

Query: 497 NIVSYNCLI 505
           ++V++  L+
Sbjct: 367 DVVAFEALL 375



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 172/349 (49%), Gaps = 12/349 (3%)

Query: 94  FDYMLRMHPSP---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D +  M   P   P  S +N     L K+      + + K +      PD+ T + LI 
Sbjct: 38  MDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIA 97

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GR+     VL  + RS F  N VT+ +LI GL +  R  EA  +    +     P
Sbjct: 98  GLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVM---QGMTTTP 154

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  TYN +I+G C++G    A    EEM    G     C P+T TY+ +I+GLCK   + 
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNLR 209

Query: 271 KAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           KA EL  +M   ++    VV + +++ G+C A D + A+ L   M++ G  PDVVT+S I
Sbjct: 210 KADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTI 269

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LC+ G +DK   LLE M+ RG  P+  TY  L+ G C   K+  A +L   M  +GC
Sbjct: 270 IDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGC 329

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             + V+Y+ + +  CK   ++ A  L + +  KG    VV +  L L +
Sbjct: 330 TPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSV 378



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 175/333 (52%), Gaps = 12/333 (3%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           T+  L++  C    +  A  L  +  +     P    YN  ++ LC++G    A+ + + 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M +G       CKP+ VT+NT+I GLCK G +D+A+++  +M+      ++VTY ++I G
Sbjct: 80  MKDG------ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNP 356
              A    EA    + M      PD  T++ I+   CK+G++D+A   LE M  R G +P
Sbjct: 134 LSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSP 190

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           +T+TY+ LI+G C +  +  A +L   M     C   VV++NTL++ YCK +D++ A  L
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            S ML  G  P VVTY+T+  GL     V++   L ++M       D  TY   + GLCK
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G ++EA  L + + +     N V+Y+ + DGL
Sbjct: 311 AGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 205/436 (47%), Gaps = 41/436 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +   L   L K         ++  +   G+ PD++  S +IN FCK  R      +
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++ +    PN VT+ ++I GLC   R+ EA     K       P + TY+  INGL +
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  + +EM+    E G V  PN V YNT+IDG CK G + +A ++   M  + I
Sbjct: 339 LEKIDEANCVLKEMS----ELGFV--PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD------------- 331
           +P+ VT  S+I+GFC ++   +A+ +  EM+ +G+  +  +FS++++             
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH 452

Query: 332 ----------------------ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                                  LCK GK  +A  L   ++ +G  PN  T N LI G C
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC 512

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               +    KL   M   G + D ++YNTLI+  CK   V+E   L  EM+ KGI+P + 
Sbjct: 513 KAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY 572

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           T+N L  GL    +++ A +L+ E ++N    + YTY   IDG CK+  V E   L   +
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL 632

Query: 490 RDSKYELNIVSYNCLI 505
              K ELN V YN LI
Sbjct: 633 VSKKLELNSVVYNSLI 648



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++++    L K +  D    + K ++  G  P+   ++ LI+ +CKMG +S    +
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L    +PN+VT  SLI+G C   +I +A  +  +        +  +++ +IN LC 
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               + AL+   EM   N       +PN     T++ GLCK G   +A EL+ ++  +  
Sbjct: 444 KFRFVTALHFIREMLLRN------LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF 497

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VT  ++I G C A +  E  +L  +M+++G+  D +T++ ++   CK GK+ +   
Sbjct: 498 VPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFE 557

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M+ +G+ P+ YT+N L+ G C  DKID A +L+   + NG + +V +Y  +I+ YC
Sbjct: 558 LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYC 617

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   VEE  +L +E++SK ++   V YN+L         +  A +L D+M+   V     
Sbjct: 618 KANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCA 677

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TY++ + GLC  G V +A  L   +R      N+V Y  +I G
Sbjct: 678 TYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG 720



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 212/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL I D ML    SP  V+  N L     K+       ++ + +   GL  +  + S+
Sbjct: 378 SEALKIRDDMLSKGISPNSVT-LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN  C   R       +  +L     PN    T+L+ GLC   +  EA  L+ +     
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ T N LI+GLC+ G+    L L  +M     E G+V   + +TYNT+I G CKEG
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDML----ERGLVF--DRITYNTLISGCCKEG 550

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +  EL  +M  + I PD+ T+  ++ G C A+  +EA RL+ E    G  P+V T+ 
Sbjct: 551 KVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYG 610

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D  CK  K+++   LL  ++ + +  N+  YN+LI  YC+   ++ A +L   M+S 
Sbjct: 611 VMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +    +Y++L++  C    V++A  L  EM  +G+ P VV Y T+  G  ++ Q+ + 
Sbjct: 671 GVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKV 730

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +  EM  +++  + +TY   IDG CK G   EA +L   + +     + V+YN   +G
Sbjct: 731 NIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNG 790

Query: 508 L 508
           L
Sbjct: 791 L 791



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 174/369 (47%), Gaps = 41/369 (11%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P+  T T L+  L   + + ++  ++    +    PDV  ++T+IN  C+      A+ L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F +M     + GV   PN VTYN II GLCK G +D+A     KM  E ++P ++TY+  
Sbjct: 279 FSKME----KLGVA--PNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVF 332

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G       +EA  +  EM + G  P+ V ++ ++D  CK G + +A ++ + M+ +G+
Sbjct: 333 INGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW------------ 402
           +PN+ T N+LI G+C +D+I  A  +   M   G   +  S++ +INW            
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH 452

Query: 403 -----------------------YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
                                   CK     EA+ L+  +L KG  P +VT N L  GL 
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC 512

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +   ++  LKL  +M    +  D  TYN  I G CK G V E  EL   +     + +I 
Sbjct: 513 KAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY 572

Query: 500 SYNCLIDGL 508
           ++N L+ GL
Sbjct: 573 TFNLLLHGL 581



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 116/237 (48%)

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ++F  +  + + P + T T ++     AN+  ++  ++  +   G+ PDV  FS +++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK  + D A  L   M   GV PN  TYN +I G C + ++D A +    M       
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            +++Y+  IN   K + ++EA  +  EM   G  P  V YNTL  G  ++  +  ALK+ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D+M    ++ ++ T N+ I G CKS  + +A  +   +      +N  S++ +I+ L
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
            G  N+   ++A  + D M R     P V  +  + G  +K    + V  + + ++S  +
Sbjct: 684 HGLCNIGLVDDAKHLLDEM-RKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNI 742

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ +T++I+I+ FCK+G+      +L  +      P+AVT+ +   GLC E ++ EA  
Sbjct: 743 HPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFK 802

Query: 199 LFTKHRVFACEPDVFTYNTLING 221
           +  +    A   D  TY TLI+G
Sbjct: 803 VCDEMSSGAVCLDEITYTTLIDG 825


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 211/421 (50%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ IF+ M   +   P   ++N +         +D   SL +R  + G  P +  ++ 
Sbjct: 183 DEAVEIFEQM-EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ C  K G+      +   + R    PN  T+  +I  LC    +  A  +    +   
Sbjct: 242 ILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +I+ LC+      A ++FE M         VC P+  T+ ++IDGL K+G
Sbjct: 301 LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK------VCSPDGATFCSLIDGLGKQG 354

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A  ++ +M D +  P+VV YTS+IR F   +   +  +++ EMM  G  PD++  +
Sbjct: 355 RVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLN 414

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+ +K   L E +  RG  P+T +Y+ LI             +L+ +M+  
Sbjct: 415 TYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQ 474

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YNT+I+ +CK+  V +A  L  EM + G  PTVVTY ++  GL +I +++ A
Sbjct: 475 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEA 534

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E + N +  +   Y++ IDG  K G V EA  +   +       N+ ++NCL+DG
Sbjct: 535 YMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDG 594

Query: 508 L 508
           L
Sbjct: 595 L 595



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 227/485 (46%), Gaps = 66/485 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL IF+ M R   + P + ++NI+ G L K  + +    +   +  AGLFP++ T +I
Sbjct: 253 DKALRIFEEMKR--DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 148 LINCFCK-----------------------------------MGRVSHGFVVLGRILRSC 172
           +I+  CK                                    GRV   + +  R+L + 
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDAD 370

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             PN V +TSLI+      R  +   ++ +     C PD+   NT ++ + + G T    
Sbjct: 371 QIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGR 430

Query: 233 NLFEEM-ANG----NGEFGVV------------------------CKPNTVTYNTIIDGL 263
            LFEE+ A G       + ++                        C  +T  YNT+IDG 
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGF 490

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G V+KA +L  +MK    +P VVTY SV+ G    +  +EA  LF E    G++ + 
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQ 550

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V +S ++D   K G++D+A  ++E M+ +G+ PN YT+N L+DG    ++I+ A   F S
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQS 610

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+   C  + ++Y  LIN  CK +   +A   + EM  +G+KP  +TY  +  GL +   
Sbjct: 611 MKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGN 670

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V +A  LF+  R +    D+ +YN  I+GL  +   L+A +LF   R     ++  +   
Sbjct: 671 VAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVA 730

Query: 504 LIDGL 508
           L+D L
Sbjct: 731 LLDAL 735



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 209/441 (47%), Gaps = 30/441 (6%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R     P  S++  L G L++    D +L+LF ++   G   +++  + LI  F + G
Sbjct: 51  MMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREG 110

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           RV     +L  +  + F  + V +   I       ++  A   F + +     PD  TY 
Sbjct: 111 RVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYT 170

Query: 217 TLINGLCRTGHTIVALNLFEEMAN---------------GNGEFGVV------------- 248
           +++  LC+      A+ +FE+M                 G G  G               
Sbjct: 171 SMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAK 230

Query: 249 -CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C P+ V YN I+  L K+G  DKA  +F +MK + + P++ TY  +I   C A +   A
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAA 289

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            ++   M + G+ P+V T ++++D LCK  K+D+A  + E M ++  +P+  T+ +LIDG
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                ++D A +++  M     + +VV Y +LI  + K    E+   +Y EM+  G  P 
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPD 409

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           ++  NT    +F+  + E+   LF+E++      DT +Y+  I  L K+GF  E  EL+ 
Sbjct: 410 LMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYY 469

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           A++D    L+  +YN +IDG 
Sbjct: 470 AMKDQGCVLDTRAYNTVIDGF 490



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 13/408 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNIL---FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  I++ ML     P  V   +++   F C  K   +     ++K +  +G  PD+  
Sbjct: 357 DDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH----KMYKEMMRSGCSPDLML 412

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +  ++C  K G    G  +   I    F P+  +++ LI  L       E   L+   +
Sbjct: 413 LNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMK 472

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C  D   YNT+I+G C++G    A  L EEM            P  VTY +++DGL 
Sbjct: 473 DQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH------PTVVTYGSVVDGLA 526

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K   +D+A  LF + K   I  + V Y+S+I GF      +EA  +  EMM +G+ P+V 
Sbjct: 527 KIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVY 586

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++D L K  ++++A    + M      PN  TY  LI+G C   K + A   +  M
Sbjct: 587 TWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEM 646

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  G   + ++Y  +I+   K+ +V +A SL+    + G  P   +YN +  GL   ++ 
Sbjct: 647 QKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRA 706

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             A +LF+E R    +  T T    +D L K+  + +A  +   +R++
Sbjct: 707 LDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLRET 754



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 9/390 (2%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           + + +++D +  +   ++ AG  P  YT   L+    K  ++   F +L  +    F P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
              +T+LI  L          ALF + +    E +V    TLI    R G    AL+L +
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM +   +       + V YN  ID   K G VD A + F +MK   + PD VTYTS++ 
Sbjct: 121 EMKSNTFD------ADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMG 174

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQ-PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
             C AN  +EA  +F E M+Q  Q P    ++ ++      GK D+A  LLE    +G  
Sbjct: 175 VLCKANRLDEAVEIF-EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCI 233

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+   YN ++       K D A ++F  M+ +  M ++ +YN +I   CK  +VE A  +
Sbjct: 234 PSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-MPNLPTYNIIIGMLCKAGNVEAAFKV 292

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
              M   G+ P V T N +   L +  +++ A  +F+ M     + D  T+ + IDGL K
Sbjct: 293 RDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGK 352

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            G V +A  ++  + D+    N+V Y  LI
Sbjct: 353 QGRVDDAYRIYERMLDADQIPNVVVYTSLI 382



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 91/200 (45%)

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           +++  EM   G  P   T   ++    K+ K+ +A  LL++M      P    Y TLI  
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                + D    LF  M+  G   +V    TLI  + +   V+ ALSL  EM S      
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +V YN       ++ +V+ A K F EM+ N +  D  TY + +  LCK+  + EA+E+F 
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +  ++      +YN +I G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMG 210


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 207/409 (50%), Gaps = 6/409 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M R    PP   S+N++   + +       + +F  +    + P+  T++ +I+   K G
Sbjct: 5   MGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG 64

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            +  GF +  +++     PNA+T+  L+ GLC   R+ E +AL  +       PD FTY+
Sbjct: 65  DLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYS 124

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L +GL R G +   L+LF +        G        T + +++GLCK+G V  A+E+ 
Sbjct: 125 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DYTCSILLNGLCKDGKVSIAEEVL 178

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             + +  + P  V Y ++I G+C   +   A   F +M  + ++PD +T++ +++ LCK 
Sbjct: 179 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            ++  A  LL  M   GVNP   T+NTLID Y  T +++    +   M+ NG   +VVSY
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
            +++N +CKN  + EA+++  +M  K + P    YN +     E    ++A  L ++M+ 
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N ++    TYN  I GLC    + EA E+  ++ + +   + VSYN LI
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 407



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ILF  L++N     +LSLF +    G+    YT SIL+N  CK G+VS    V
Sbjct: 118 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 177

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ +   P  V + +LI G C    +  A + F + +    +PD  TYN LINGLC+
Sbjct: 178 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 237

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L  EM + NG       P   T+NT+ID   + G ++K   +  +M++  +
Sbjct: 238 AERITNAQDLLMEMQD-NG-----VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 291

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV+Y S++  FC      EA  +  +M  + V P+   ++ I+D   ++G  D+A  
Sbjct: 292 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 351

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+E M   G++P+  TYN LI G C   +I  A ++  S+ ++  + D VSYNTLI+  C
Sbjct: 352 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 411

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              ++++AL L   M   GIK TV TY+ L  GL    ++     L+ +M +N+V     
Sbjct: 412 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 471

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
            +N  ++   K G  ++A +L + +
Sbjct: 472 IHNIMVEAYSKYGNEIKAEDLRKEM 496



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 10/404 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P   ++N+L   L +        +L   + S  + PD +T+SIL +   + G    
Sbjct: 79  HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 138

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              + G+ L++  T    T + L+ GLC + ++  A  +          P    YNTLIN
Sbjct: 139 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 198

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C+TG    A + F +M + +       KP+ +TYN +I+GLCK   +  A++L ++M+
Sbjct: 199 GYCQTGELEGAFSTFGQMKSRH------IKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D  +NP V T+ ++I  +       +   +  EM + G++P+VV++  I++  CKNGK+ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  +L+ M  + V PN   YN +ID Y      D A  L   M+SNG    +V+YN LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              C    + EA  + + + +  + P  V+YNTL         +++AL L   M +  + 
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           +   TY+  I GL  +G + E   L++ +  +    N+V  N +
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQN----NVVPSNAI 472



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           PN  +YN +I G+ + G    A E+F +M +  + P+ +TY ++I G     D     RL
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M+  G++P+ +T++V++  LC+ G+M + S LL+ M  + + P+ +TY+ L DG   
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                    LF     NG      + + L+N  CK+  V  A  +   +++ G+ PT V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YNTL  G  +  ++E A   F +M+  H+  D  TYN  I+GLCK+  +  A +L   ++
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 491 DSKYELNIVSYNCLID 506
           D+     + ++N LID
Sbjct: 253 DNGVNPTVETFNTLID 268



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 29/340 (8%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           IL   L K+        + + L +AGL P    ++ LIN +C+ G +   F   G++   
Sbjct: 160 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 219

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              P+ +T+ +LI GLC   RI  A  L  + +     P V T+NTLI+   RTG     
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 279

Query: 232 LNLFEEMANGNGEFGVV---------CK--------------------PNTVTYNTIIDG 262
             +  EM     +  VV         CK                    PN   YN IID 
Sbjct: 280 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 339

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             + G  D+A  L  KMK   I+P +VTY  +I+G C  +  +EA+ +   + +  + PD
Sbjct: 340 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 399

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            V+++ ++   C  G +DKA  L + M   G+     TY+ LI G     +++    L+ 
Sbjct: 400 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 459

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            M  N  +     +N ++  Y K  +  +A  L  EML K
Sbjct: 460 KMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 8/260 (3%)

Query: 95  DYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           D ++ M  +   P V +FN L     +    +    +   +   GL P++ ++  ++N F
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK G++     +L  +      PNA  + ++I          +A  L  K +     P +
Sbjct: 306 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 365

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LI GLC       A  +   ++N          P+ V+YNT+I   C  G +DKA
Sbjct: 366 VTYNLLIKGLCNQSQISEAEEIINSLSNHR------LIPDAVSYNTLISACCYRGNIDKA 419

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L  +M    I   V TY  +I G   A   NE + L+ +MM   V P     +++++ 
Sbjct: 420 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479

Query: 333 LCKNGKMDKASRLLELMIWR 352
             K G   KA  L + M+ +
Sbjct: 480 YSKYGNEIKAEDLRKEMLQK 499



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 98/192 (51%)

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           D    P+  +++V++  + + G+   A  + + M  R V PN  TYNT+IDG+     ++
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
              +L   M  +G   + ++YN L++  C+   + E  +L  EM S+ + P   TY+ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL      +  L LF +  +N V    YT +  ++GLCK G V  A E+ +++ ++   
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 496 LNIVSYNCLIDG 507
              V YN LI+G
Sbjct: 188 PTRVIYNTLING 199



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 62/152 (40%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           PN+   I    ++ +   P + ++N+L   L           +   L++  L PD  +++
Sbjct: 345 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 404

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  C  G +     +  R+ +        T+  LI GL    R+ E   L+ K    
Sbjct: 405 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 464

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
              P    +N ++    + G+ I A +L +EM
Sbjct: 465 NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 210/418 (50%), Gaps = 22/418 (5%)

Query: 101 HPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP   P  SS N L   L   K  D     F+      + PDIYT + +I+  C++G++ 
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI--MEAAALFTKHRVFA-CEPDVFTYN 216
               V   I      P+  T+ SLI G C +     M    +  K  V A   P   T+ 
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LING C+  +T  A+ +FEEM     + G+    + VTYN++I GLC EG V++  +L 
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMK----QQGIAA--SVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 277 LKMKDENINPDVVTYTSVIRGFCY------ANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            +M+D  ++P+ +T+  V++GFC       ANDW +       M ++ V+PDVV +++++
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG------MTERNVEPDVVIYTILI 376

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D   + GKM+ A  + E M  +G++PN  TYN LI G+  +     A  L   M+  G  
Sbjct: 377 DGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DVV+YN LI   C   +V +A+ L  EM   G++P  +TYNT+  G  +   ++ A ++
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              M +    A+  TYN FI   C+ G + EA +L   + D     N ++Y  + +G+
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 185/385 (48%), Gaps = 45/385 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F   LR   SP  + +FN +   L +         + K + + GL P + T++ LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 154 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
           K G      H  ++L  ++ +  +P AVTF  LI G C  S    A  +F + +      
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
            V TYN+LI+GLC  G     + L EEM +     G+   PN +T+  ++ G CK+G + 
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMED----LGL--SPNEITFGCVLKGFCKKGMMA 351

Query: 271 KAKELFLKMKDENINPDVV-----------------------------------TYTSVI 295
            A +    M + N+ PDVV                                   TY  +I
Sbjct: 352 DANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GF  + DW  A  L  EM ++G++ DVVT++V++  LC  G++ KA +LL+ M   G+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN  TYNT+I G+C    I  A ++   ME      +VV+YN  I ++C+   ++EA  L
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDL 531

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFE 440
            +EML K + P  +TY T+  G+ E
Sbjct: 532 LNEMLDKCLVPNGITYETIKEGMME 556



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 7/195 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ + + M +   SP  V+++N L    +++  + +   L   +   G+  D+ T+++L
Sbjct: 387 DAMAVKEAMAKKGISPN-VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C  G V     +L  +      PN +T+ ++I+G C +  I  A  + T+      
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             +V TYN  I   C+ G    A +L  EM +          PN +TY TI +G+ ++G+
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK------CLVPNGITYETIKEGMMEKGY 559

Query: 269 VDKAKELFLKMKDEN 283
               +   +    EN
Sbjct: 560 TPDIRGCTVSQASEN 574


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 194/369 (52%), Gaps = 14/369 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           D YT+ +L+   C  G +     +L  + +     P    +   +  LC   ++ EA  +
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
               +  AC+PDV T+NTLI GLC+ G    A  + +EM      F      N VTYNT+
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG--FAA----NLVTYNTL 130

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-- 317
           I+GL   G   ++ E  L M+     PD  TY ++I GFC + + + A   F+E M Q  
Sbjct: 131 INGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYG-FLEEMKQRA 186

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDH 376
           G  PD  T+S++++ LCK+  + KA  LL+ MI R     +   +NTL+DGYC    +D 
Sbjct: 187 GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDR 246

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           AR+L  SM  +GC  DVV+Y+T+I+  C+  DV++  +L  +M+S+G KP VVTY  L  
Sbjct: 247 ARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVT 306

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  ++  A +L   M  +    +  TY+   DGLCK   +  A +L  +IRD     
Sbjct: 307 GLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVT 366

Query: 497 NIVSYNCLI 505
           ++V++  L+
Sbjct: 367 DVVAFETLL 375



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 173/349 (49%), Gaps = 12/349 (3%)

Query: 94  FDYMLRMHPSP---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D +  M   P   P  S +N     L K+      + + K +      PD+ T + LI 
Sbjct: 38  MDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIA 97

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             CK GR+     VL  + RS F  N VT+ +LI GL +  R  EA  +    +     P
Sbjct: 98  GLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVM---QGMTTTP 154

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D  TYN +I+G C++G    A    EEM    G     C P+T TY+ +I+GLCK   + 
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNLR 209

Query: 271 KAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           KA EL  +M   ++    VV + +++ G+C A D + A+ L   M++ G  PDVVT+S I
Sbjct: 210 KADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTI 269

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LC+ G +DK   LLE M+ RG  P+  TY  L+ G C   K+  A +L   M  +GC
Sbjct: 270 IDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGC 329

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             + V+Y+ + +  CK   ++ A  L + +  KG    VV + TL L +
Sbjct: 330 TPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV 378



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 175/333 (52%), Gaps = 12/333 (3%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           T+  L++  C    +  A  L  +  +     P    YN  ++ LC++G    A+ + + 
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M +G       CKP+ VT+NT+I GLCK G +D+A+++  +M+      ++VTY ++I G
Sbjct: 80  MKDG------ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNP 356
              A    EA    + M      PD  T++ I+   CK+G++D+A   LE M  R G +P
Sbjct: 134 LSSAGRSGEA---VLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSP 190

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           +T+TY+ LI+G C +  +  A +L   M     C   VV++NTL++ YCK +D++ A  L
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            S ML  G  P VVTY+T+  GL     V++   L ++M       D  TY   + GLCK
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +G ++EA  L + + +     N V+Y+ + DGL
Sbjct: 311 AGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 203/433 (46%), Gaps = 14/433 (3%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N+ +P  A  +F +  R       V ++N     L K  H      +F  +      P+I
Sbjct: 13  NIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNI 72

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           YT+ I++   C   +      +L  +     TP       L+  LC   ++  A  L+ K
Sbjct: 73  YTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELY-K 131

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                C  D  +YN L  GLC+      AL +F EM     E  VV  P+ +TYN ++ G
Sbjct: 132 RLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEME----ENAVV--PSLLTYNGLLYG 185

Query: 263 LCKEGFVDKAKELFLKM----KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            C+ G +++A  L  +M    K  ++ PD+ +Y +VI GFC A     A+ +   M+  G
Sbjct: 186 YCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSG 245

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P+VVTF+ ++D LC  GK+D+A+ + E M+ R   P   TY  LI G+    +ID A 
Sbjct: 246 CSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKAN 305

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             FV M   G   +V +Y  LI   C    VE+AL +   M S G +P VVTY  +   L
Sbjct: 306 DYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGAL 365

Query: 439 FEIHQVERALKLFDEMRRNHVA---ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            +  Q+ERA KLF++   +  A    D+Y Y+  I  LC+    LEA E F  + +SK  
Sbjct: 366 CKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLV 425

Query: 496 LNIVSYNCLIDGL 508
                Y  + DGL
Sbjct: 426 AKPHIYKAMADGL 438



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 183/395 (46%), Gaps = 38/395 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  IFD ML      P + ++ I+   L  +   D  L L + + S  L P  +  ++
Sbjct: 54  SKARKIFDDML-YKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNM 112

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++C CK G+V   + +  R+   C + + +++  L  GLC   +I  A A+F +    A
Sbjct: 113 LVSCLCKNGKVDAAYELYKRLSDEC-SLDRISYNMLTYGLCKADQIDRALAVFGEMEENA 171

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
             P + TYN L+ G CR G    A+ L EEM  G     VV                   
Sbjct: 172 VVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQL 231

Query: 249 --------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
                         C PN VT+NT++DGLC  G +D+A  +F  M + N  P  VTYT +
Sbjct: 232 PTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVL 291

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G   A   ++A   F++M+ +GV+P+V T++ ++  LC   K++ A  +L+ M   G 
Sbjct: 292 ITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGR 351

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLF---VSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            PN  TY  +I   C   +I+ A KLF   +   +  C  D  +Y+T+I W C+     E
Sbjct: 352 EPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLE 411

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           A   +  M+   +      Y  +  GL  + + E+
Sbjct: 412 AYEYFLRMVESKLVAKPHIYKAMADGLELVQETEK 446



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 14/308 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL----NSAGLFPDIY 143
           + AL +F  M      P  ++   +L+G   +    +  ++L + +      + + PD+Y
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYG-YCRAGRMEQAMTLLEEMIEGKKGSDVVPDMY 216

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           +++ +I+ FCK  ++     VL R+++S  +PN VTF +L+ GLC   ++ EA A+F   
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYM 276

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               CEP   TY  LI G  R      A + F +M     E      PN  TY  +I GL
Sbjct: 277 VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVE------PNVYTYTALIGGL 330

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV---Q 320
           C    V+ A E+  +M      P+VVTYT VI   C       A +LF + M       +
Sbjct: 331 CDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCK 390

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD   +S I+  LC+  K  +A      M+   +    + Y  + DG  L  + +   ++
Sbjct: 391 PDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERV 450

Query: 381 FVSMESNG 388
            +   ++G
Sbjct: 451 CLEASAHG 458



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 3/216 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L      D   ++F+ +      P   T+++LI    +  R+      
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDY 307

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR    PN  T+T+LI GLC  +++ +A  +  +      EP+V TY  +I  LC+
Sbjct: 308 FVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCK 367

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  LF    +  G     CKP++  Y+TII  LC++    +A E FL+M +  +
Sbjct: 368 GGQIERATKLFN---DAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKL 424

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
                 Y ++  G     +  + +R+ +E    G++
Sbjct: 425 VAKPHIYKAMADGLELVQETEKVERVCLEASAHGIE 460


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 212/418 (50%), Gaps = 9/418 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL + + M      P  V+ +N +   L K      V  L  ++ ++GLFP+  T++IL
Sbjct: 229 EALRLINQMGEYGCCPDNVT-YNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNIL 287

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++ +CK+  +     V+  +      P+  T+ ++++GLC E +I EA  L  K   F  
Sbjct: 288 VHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKL 347

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            PDV TYNTLI+G      +  A  L EEM A G        K N VT+N +I   C EG
Sbjct: 348 VPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG-------VKENGVTHNIMIKWFCTEG 400

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  + +KM +   +PD  TY ++I G+C A    EA ++  EM  +G++ D  T +
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  +C   ++D A  L      RG   +  TY TLI GY   ++ D A KL+  M+  
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +  +++YNT+I   C +   ++A+   +E+L KG+ P   T N +  G      VE+A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            +  ++M  + +  D +T N  + GLC+ G + + L LF         ++ V+YN +I
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIII 638



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 221/424 (52%), Gaps = 10/424 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS--LFKRLNSAGLFPDIYT 144
           P+    IF+ M R+   P  ++   +L   +  N  +  V S  +F+     G+ P++ T
Sbjct: 154 PHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNT 213

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +ILI+ +C          ++ ++      P+ VT+ +++  LC  S++ +   L  + +
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK 273

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                P+  TYN L++G C+      A  + E M  G G       P+  TYNT++ GLC
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT-GKGML-----PDVWTYNTMVRGLC 327

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK-RLFIEMMDQGVQPDV 323
            EG +D+A  L  KM+   + PDVVTY ++I G C+ +  ++A  +L  EM  +GV+ + 
Sbjct: 328 DEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENG 386

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT ++++   C  GK+D+AS ++  M+  G +P+ +TYNT+I+GYC   K+  A K+   
Sbjct: 387 VTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDE 446

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   D  + NTL++  C  K +++A +L  +   +G     VTY TL +G F+  Q
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            +RALKL++EM+   + A   TYN  I GLC SG   +A++    + +     +  + N 
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566

Query: 504 LIDG 507
           +I G
Sbjct: 567 IIHG 570



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V++FNIL      + + +  L L  ++   G  PD  T++ ++   CK  +++    +
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDL 268

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  S   PN  T+  L+ G C    + EAA +          PDV+TYNT++ GLC 
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ L ++M +    F +V  P+ VTYNT+IDG  +    D A +L  +MK   +
Sbjct: 329 EGKIDEAVRLRDKMES----FKLV--PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGV 382

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             + VT+  +I+ FC     +EA  + ++M++ G  PD  T++ +++  CK GKM +A +
Sbjct: 383 KENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYK 442

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +++ M  +G+  +T+T NTL+   CL  ++D A  L +     G + D V+Y TLI  Y 
Sbjct: 443 MMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYF 502

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K++  + AL L+ EM   GI  T++TYNT+  GL    + ++A+   +E+    +  D  
Sbjct: 503 KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T N  I G C  G V +A +    + +   + +I + N L+ GL
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGL 606



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 206/445 (46%), Gaps = 42/445 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN-CFCKMGRVSHGFV 163
           P V ++N +   L      D  + L  ++ S  L PD+ T++ LI+ CF   G  +  F 
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA-AFK 372

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++  +       N VT   +IK  C E +I EA+ +  K       PD FTYNT+ING C
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432

Query: 224 RTGHTIVALNLFEEMANG---------NGEFGVVCKP--------------------NTV 254
           + G    A  + +EM            N     +C                      + V
Sbjct: 433 KAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV 492

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY T+I G  K+   D+A +L+ +MK+  I   ++TY ++IRG C +   ++A     E+
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNEL 552

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +++G+ PD  T ++I+   C  G ++KA +    M+   + P+ +T N L+ G C    +
Sbjct: 553 LEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGML 612

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           +    LF +  S G   D V+YN +I+ +CK + +E+A  L +EM  K ++P   TYN +
Sbjct: 613 EKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAI 672

Query: 435 FLGLFEIHQVERALKL---FDEMRRNHVAADT--------YTYNNFIDGLCKSGFVLEAL 483
             GL +  + E A KL   F E  +     DT          Y+  I  LC  G   +A+
Sbjct: 673 VTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAM 732

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           +LF+        LN  +Y  L+DGL
Sbjct: 733 KLFQQAEQKGVSLNKYTYIKLMDGL 757



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 180/378 (47%), Gaps = 17/378 (4%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           + NI+          D   ++  ++  +G  PD +T++ +IN +CK G+++  + ++  +
Sbjct: 388 THNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            R     +  T  +L+  +C E ++ +A  L  K R      D  TY TLI G  +    
Sbjct: 448 GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQA 507

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L+EEM     E G+V     +TYNTII GLC  G  D+A +   ++ ++ + PD 
Sbjct: 508 DRALKLWEEMK----ETGIVA--TIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            T   +I G+C+     +A +   +M++  ++PD+ T ++++  LC+ G ++K   L   
Sbjct: 562 STSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNT 621

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
            I +G   +T TYN +I  +C   +++ A  L   ME      D  +YN ++    K   
Sbjct: 622 WISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGR 681

Query: 409 VEEALSLYSEMLSKGIK-------PTVVT----YNTLFLGLFEIHQVERALKLFDEMRRN 457
            EEA  L  +   KG +       P + T    Y+     L    + + A+KLF +  + 
Sbjct: 682 TEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQK 741

Query: 458 HVAADTYTYNNFIDGLCK 475
            V+ + YTY   +DGL K
Sbjct: 742 GVSLNKYTYIKLMDGLLK 759



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 119/271 (43%), Gaps = 22/271 (8%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N +   L  +   D  +     L   GL PD  T +I+I+ +C  G V   F    
Sbjct: 526 IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHN 585

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +++     P+  T   L++GLC E  + +   LF          D  TYN +I+  C+  
Sbjct: 586 KMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER 645

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK-------M 279
               A +L  EM   N E      P+  TYN I+ GL K G  ++A++L LK       +
Sbjct: 646 RLEDAFDLMTEMEGKNLE------PDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQV 699

Query: 280 KDENINPDVVT----YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           K ++ +P++ T    Y+  I   C    + +A +LF +   +GV  +  T+  +MD L K
Sbjct: 700 KTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759

Query: 336 NGKMDKASRLLELMIWRGV-----NPNTYTY 361
             K    + LL  M+   +     NP  Y +
Sbjct: 760 RRKSFTTTSLLPFMVSATIQFFDRNPMRYAH 790



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 3/156 (1%)

Query: 356 PNTYTYNTLIDGYCLTDK---IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           PN  T NTL++    ++    +  +R++F      G   +V ++N LI+ YC + + EEA
Sbjct: 171 PNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEA 230

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L L ++M   G  P  VTYNT+   L +  Q+ +   L  +M+ + +  +  TYN  + G
Sbjct: 231 LRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHG 290

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            CK  ++ EA E+   +       ++ +YN ++ GL
Sbjct: 291 YCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGL 326



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P + + NIL   L +    +  L+LF    S G   D  T++I+I+ FCK  R+  
Sbjct: 590 HSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLED 649

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-------RVFACEPDVF 213
            F ++  +      P+  T+ +++ GL    R  EA  L  K        +     P++ 
Sbjct: 650 AFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELG 709

Query: 214 T----YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           T    Y+  I+ LC  G    A+ LF++      + GV    N  TY  ++DGL K
Sbjct: 710 TSDMMYSEQISSLCTQGKYKDAMKLFQQAE----QKGVSL--NKYTYIKLMDGLLK 759



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 11/153 (7%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG-- 161
           P    ++NI+     K +  +    L   +    L PD YT++ ++    K GR      
Sbjct: 628 PMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEK 687

Query: 162 ----FVVLGRILRSCFTP-----NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
               F   G+ +++  T      + + ++  I  LC + +  +A  LF +        + 
Sbjct: 688 LALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNK 747

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           +TY  L++GL +   +    +L   M +   +F
Sbjct: 748 YTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQF 780


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 216/420 (51%), Gaps = 11/420 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL   + M++    P  +    ++ G L  +K  +  + + + L   G  PD + ++ +
Sbjct: 95  EALYFLEQMVKRGYKPDVILCTKLIKG-LFTSKRTEKAVRVMEILEQYG-DPDSFAYNAV 152

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FC+  R      V+ R+    F+P+ VT+  LI  LCA  ++  A  +  +     C
Sbjct: 153 ISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNC 212

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P V TY  LI      G    A+ L +EM +         +P+  TYN I+ G+CK G 
Sbjct: 213 NPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG------LQPDMYTYNVIVRGMCKRGL 266

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD+A E    +   N  P +  Y  +++G      W   +RL  +M+ +G +P++VT+SV
Sbjct: 267 VDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSV 323

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC++GK  +A  +L +M  +G+NP+ Y Y+ LI  +C   K+D A      M S G
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D+V+YNT++   CK    +EAL+++ ++   G  P   +YNT+F  L+      RAL
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRAL 443

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  EM  N V  D  TYN+ I  LC+ G V EA+ L   +  ++++  ++SYN ++ GL
Sbjct: 444 TMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGL 503



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 195/404 (48%), Gaps = 9/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N +     ++  +D    +  R+   G  PD+ T++ILI   C  G++     V
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + ++L     P  +T+T LI+       I +A  L  +      +PD++TYN ++ G+C+
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A   FE ++N N        P+   YN ++ GL  EG  +  + L   M  +  
Sbjct: 264 RGLVDRA---FEFVSNLN------TTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGC 314

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTY+ +I   C      EA  +   M ++G+ PD   +  ++   CK GK+D A  
Sbjct: 315 EPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIG 374

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            ++ MI  G  P+   YNT++   C   + D A  +F  +E  GC  +  SYNT+     
Sbjct: 375 FVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALW 434

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            + D   AL++  EMLS G+ P  +TYN+L   L     V+ A+ L  +M R        
Sbjct: 435 SSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVI 494

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +YN  + GLCK+  +++A+E+   + D+  + N  +Y  L++G+
Sbjct: 495 SYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 127/247 (51%), Gaps = 8/247 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++++L   L ++      + + + +   GL PD Y +  LI+ FCK G+V      
Sbjct: 316 PNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGF 375

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++ + + P+ V + +++  LC + R  EA  +F K     C P+  +YNT+   L  
Sbjct: 376 VDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWS 435

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +G  I AL +  EM +NG         P+ +TYN++I  LC++G VD+A  L + M+   
Sbjct: 436 SGDKIRALTMILEMLSNG-------VDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTE 488

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P V++Y  V+ G C A+   +A  +   M+D G QP+  T++++++ +   G    A 
Sbjct: 489 WQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAV 548

Query: 344 RLLELMI 350
            L + ++
Sbjct: 549 ELAKSLV 555



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 34/189 (17%)

Query: 330 MDELCKNGKMDKASRLLELMIWRGV----------------------------------N 355
           ++ LCK GK  +A   LE M+ RG                                   +
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+++ YN +I G+C +D+ D A ++ + M+  G   DVV+YN LI   C    ++ AL +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             ++L     PTV+TY  L         ++ A++L DEM    +  D YTYN  + G+CK
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 476 SGFVLEALE 484
            G V  A E
Sbjct: 264 RGLVDRAFE 272



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 1/156 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL IF  +  +   PP  SS+N +FG L  +      L++   + S G+ PD  T++ 
Sbjct: 405 DEALNIFKKLEEVG-CPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNS 463

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C+ G V     +L  + R+ + P  +++  ++ GLC   RI++A  +        
Sbjct: 464 LISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNG 523

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           C+P+  TY  L+ G+   G    A+ L + + + N 
Sbjct: 524 CQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNA 559



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           +N  CK     EAL    +M+ +G KP V+    L  GLF   + E+A+++  E+   + 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM-EILEQYG 142

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D++ YN  I G C+S     A  +   ++   +  ++V+YN LI  L
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSL 191


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 191/379 (50%), Gaps = 12/379 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +    LF+ +   G+ P +YT++ILI+ FCK G +      
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR   TPN VT+TSLI       ++ +A  LF    +   +P+V TY  LI+G C+
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 225 TGHTIVALNLFEEMANGNGEFGVV----------CK-PNTVTYNTIIDGLCKEGFVDKAK 273
            G    A  ++  M  G+ E   +          C+ PN +TY  ++DGLCK   V++A 
Sbjct: 571 AGQIDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAH 629

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           EL   M      P+ + Y ++I GFC       A+ +F++M ++G  P++ T+S +++ L
Sbjct: 630 ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSL 689

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K  ++D   ++L  M+     PN   Y  +IDG C   K + A +L + ME  GC  +V
Sbjct: 690 FKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNV 749

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++Y  +I+ + K   +E+ L LY +M SKG  P  +TY  L         ++ A +L DE
Sbjct: 750 ITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDE 809

Query: 454 MRRNHVAADTYTYNNFIDG 472
           M++ +      +Y   I+G
Sbjct: 810 MKQTYWPRHISSYRKIIEG 828



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 194/408 (47%), Gaps = 22/408 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    +   + S G  PD  T+S +I   C   +V   F++   + ++   P
Sbjct: 427 CLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVP 486

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A   F +     C P+V TY +LI+   +      A  LF
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK--------------D 281
           E M           KPN VTY  +IDG CK G +DKA +++ +M+              D
Sbjct: 547 EMMLLEGS------KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLD 600

Query: 282 ENI--NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           +N    P+++TY +++ G C AN   EA  L   M   G +P+ + +  ++D  CK GK+
Sbjct: 601 DNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKL 660

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           + A  +   M  RG  PN YTY++LI+      ++D   K+   M  N C  +VV Y  +
Sbjct: 661 ENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM 720

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  CK    EEA  L  +M   G  P V+TY  +  G  +I ++E+ L+L+ +M     
Sbjct: 721 IDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGC 780

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A +  TY   I+  C +G + EA  L   ++ + +  +I SY  +I+G
Sbjct: 781 APNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 209/433 (48%), Gaps = 27/433 (6%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD MLR + +P  V+  +++   L   K +D    LF+ +   G  P++ T++ LI+  C
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDAN-KLFEMMLLEGSKPNVVTYTALIDGHC 569

Query: 154 KMGRVSHGFVVLGRIL----------------RSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           K G++     +  R+                   C TPN +T+ +L+ GLC  +R+ EA 
Sbjct: 570 KAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAH 629

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            L     V  CEP+   Y+ LI+G C+TG    A  +F +M+    E G    PN  TY+
Sbjct: 630 ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMS----ERGYC--PNLYTYS 683

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           ++I+ L KE  +D   ++  KM + +  P+VV YT +I G C      EA RL ++M + 
Sbjct: 684 SLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV 743

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P+V+T++ ++D   K GK+++   L   M  +G  PN  TY  LI+  C T  +D A
Sbjct: 744 GCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEA 803

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            +L   M+       + SY  +I  +  N++   ++ L  E+      P    Y  L   
Sbjct: 804 HRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDN 861

Query: 438 LFEIHQVERALKLFDEMRRNH--VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             +  ++E AL L +E+  +     A+ Y Y + I+ L  +  V +A EL+ ++ +    
Sbjct: 862 FIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVV 921

Query: 496 LNIVSYNCLIDGL 508
             + ++  LI GL
Sbjct: 922 PELSTFVHLIKGL 934



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 226/512 (44%), Gaps = 77/512 (15%)

Query: 56  LRLTVKDRASLKK---FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNI 112
           +++   DR  L+K   FL ++C  +G  ++ L    E   + D+  +  P+     ++N 
Sbjct: 159 MQIRDDDRELLRKLLNFLIQKCCRNGMWNVAL---EELGRLKDFGYKASPT-----TYNA 210

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L     +    DT   + + ++++G   D  T        CK GR      +L    +  
Sbjct: 211 LIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEE 267

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY----------------- 215
           F P+ V +  ++ GLC  S   EA  +  + R  +C P+V TY                 
Sbjct: 268 FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCK 327

Query: 216 ------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
                             N+L++  C++     A  LF++M          C+P  + YN
Sbjct: 328 RILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG------CQPGYLLYN 381

Query: 258 TIIDGLCK------EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
             I  +C          ++ A++ + +M D  +  + V  ++  R  C A  +++A  + 
Sbjct: 382 IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEII 441

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EMM +G  PD  T+S ++  LC   K++KA  L E M   G+ P+ YTY  LID +C  
Sbjct: 442 CEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKA 501

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             I  AR  F  M  + C  +VV+Y +LI+ Y K + V +A  L+  ML +G KP VVTY
Sbjct: 502 GLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTY 561

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAAD----------------TYTYNNFIDGLCK 475
             L  G  +  Q+++A +++  M+ +  ++D                  TY   +DGLCK
Sbjct: 562 TALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCK 621

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  V EA EL   +  +  E N + Y+ LIDG
Sbjct: 622 ANRVEEAHELLDTMSVNGCEPNQIVYDALIDG 653



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 213/489 (43%), Gaps = 86/489 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N +   L +   +   + +  R+ S    P++ T+ IL++     G++     +
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     PN   F SL+   C       A  LF K     C+P    YN  I  +C 
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICS 389

Query: 225 T----GHTIVAL--NLFEEMAN------------------GNGEFG----VVCK------ 250
                G  ++ L    + EM +                  G G+F     ++C+      
Sbjct: 390 NEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGF 449

Query: 251 -PNTVTYNTI-----------------------------------IDGLCKEGFVDKAKE 274
            P+  TY+ +                                   ID  CK G + +A+ 
Sbjct: 450 VPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARN 509

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
            F +M  +N  P+VVTYTS+I  +  A    +A +LF  M+ +G +P+VVT++ ++D  C
Sbjct: 510 WFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHC 569

Query: 335 KNGKMDKASRLLELM----------IWRGVN------PNTYTYNTLIDGYCLTDKIDHAR 378
           K G++DKA ++   M          ++  ++      PN  TY  L+DG C  ++++ A 
Sbjct: 570 KAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAH 629

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L  +M  NGC  + + Y+ LI+ +CK   +E A  ++ +M  +G  P + TY++L   L
Sbjct: 630 ELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSL 689

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           F+  +++  LK+  +M  N    +   Y + IDGLCK G   EA  L   + +     N+
Sbjct: 690 FKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNV 749

Query: 499 VSYNCLIDG 507
           ++Y  +IDG
Sbjct: 750 ITYTAMIDG 758



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 155/390 (39%), Gaps = 52/390 (13%)

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           RVSH F++  R          + F  LI+  C       A     + + F  +    TYN
Sbjct: 152 RVSHKFLMQIRDDDRELLRKLLNF--LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYN 209

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LI    R      A  +  EM+N           +  T       LCK G    A  L 
Sbjct: 210 ALIQVFLRADKLDTAFLVHREMSNSGFRM------DGCTLGCFAYSLCKAGRCGDALSLL 263

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            K   E   PD V Y  ++ G C A+ + EA  +   M      P+VVT+ +++      
Sbjct: 264 EK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGK 320

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++ +  R+L +M+  G  PN   +N+L+  YC +    +A KLF  M   GC    + Y
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLY 380

Query: 397 NTLINWYCKNKDV-----------------------------------------EEALSL 415
           N  I   C N+++                                         ++A  +
Sbjct: 381 NIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEI 440

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             EM+SKG  P   TY+ +   L +  +VE+A  LF+EM++N +    YTY   ID  CK
Sbjct: 441 ICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCK 500

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +G + +A   F  +       N+V+Y  LI
Sbjct: 501 AGLIQQARNWFDEMLRDNCTPNVVTYTSLI 530



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 145/311 (46%), Gaps = 16/311 (5%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           ++ L     K    +    +F +++  G  P++YT+S LIN   K  R+     VL ++L
Sbjct: 647 YDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKML 706

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +  TPN V +T +I GLC   +  EA  L  K     C P+V TY  +I+G  + G   
Sbjct: 707 ENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIE 766

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             L L+ +M +        C PN +TY  +I+  C  G +D+A  L  +MK       + 
Sbjct: 767 QCLELYRDMCSKG------CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHIS 820

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +Y  +I GF    ++  +  L  E+ +    P    + +++D   K G+++ A  LLE +
Sbjct: 821 SYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI 878

Query: 350 IWRGVNP-----NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
                +P     N Y Y +LI+      K+D A +L+ SM +   + ++ ++  LI    
Sbjct: 879 ---SSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLT 935

Query: 405 KNKDVEEALSL 415
           +    +EAL L
Sbjct: 936 RVGKWQEALQL 946



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 8/219 (3%)

Query: 94  FDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +  ML+M      P V ++  +     K    +  L L++ + S G  P+  T+ +LIN 
Sbjct: 734 YRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINH 793

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            C  G +     +L  + ++ +  +  ++  +I+G   E   + +  L  +       P 
Sbjct: 794 CCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNRE--FITSIGLLDELSENESVPV 851

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
              Y  LI+   + G    ALNL EE+++       +   N   Y ++I+ L     VDK
Sbjct: 852 ESLYRILIDNFIKAGRLEGALNLLEEISSSPS----LAVANKYLYTSLIESLSHASKVDK 907

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           A EL+  M ++N+ P++ T+  +I+G      W EA +L
Sbjct: 908 AFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 94/252 (37%), Gaps = 38/252 (15%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N +I   C+ G  + A E   ++KD        TY ++I+ F  A+  + A  +  EM +
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G + D  T       LCK G+   A  LLE                             
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLE----------------------------- 264

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            ++ FV         D V YN +++  C+    +EA+ +   M S    P VVTY  L  
Sbjct: 265 -KEEFVP--------DTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLS 315

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G     Q+ R  ++   M       +   +N+ +   CKS     A +LF+ +     + 
Sbjct: 316 GCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQP 375

Query: 497 NIVSYNCLIDGL 508
             + YN  I  +
Sbjct: 376 GYLLYNIFIGSI 387


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 222/489 (45%), Gaps = 69/489 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + +  +R    P  V+ +N+    L K +  D    L K+++     P   T++ 
Sbjct: 58  DEAFSVLERAVRAGCEPDYVT-YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   K GR+     +L +++    +P   T+T +I GL    R+ EA  +F       
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 208 CEPDVFTYNTLINGL---------------------------------------CRTGHT 228
           C PD F Y  LI+GL                                       C +G+ 
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236

Query: 229 IVALNLFEEMANG--------NGEFGVVCK--------------------PNTVTYNTII 260
             AL  F+E+ +         N     +CK                    P   TY +++
Sbjct: 237 EDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLV 296

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DG  K G +D+A     +  +    PD VTYTS+I G C      E    F EM ++G +
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 356

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD VT++ ++D   K   + KA R+   M+  G   +T TYN ++DG C   ++  A   
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F++ME  GC+  VV+Y+ L++ +C   +V  A+ L+  ML +G +P +V+YN +  GL  
Sbjct: 417 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 476

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS-GFVLEALELFRAIRDSKYELNIV 499
             ++ +A   F+++ +  +  D YT+N+F+ GLC+    V + +ELF ++       N+ 
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLH 536

Query: 500 SYNCLIDGL 508
           SY+ L+DG+
Sbjct: 537 SYSILMDGI 545



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 212/425 (49%), Gaps = 17/425 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+ + D M    P  P + +F ++   L + K  D   S+ +R   AG  PD  T+++
Sbjct: 26  DRAMLLLDEM----PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNV 81

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I+  CK  RV   F +L ++      P  VT+T+L+ GL    R+ EA A+  +     
Sbjct: 82  FIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKG 141

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + TY  +I+GL + G    A  +F +M  GNG     C+P+   Y  +I GL K G
Sbjct: 142 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDML-GNG-----CRPDAFVYTALISGLAKIG 195

Query: 268 FVDKAKELFLKMKDEN-----INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            +D+A  ++L    EN     + PDVV +  VIR  C + +  +A   F E +D  +   
Sbjct: 196 KLDEAL-VYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDDSLDLT 253

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             TF+ ++  LCK  + ++A   ++ M  R   P  +TY +L+DG+    ++D A     
Sbjct: 254 HFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLK 313

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
                G + D V+Y ++I+  CK   VEE    + EM ++G +P  VTY  L  G  +  
Sbjct: 314 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 373

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            + +A +++ +M ++     T TYN  +DGLCK+G V EA   F A+ +      +V+Y+
Sbjct: 374 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 433

Query: 503 CLIDG 507
            L+DG
Sbjct: 434 ALMDG 438



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 193/392 (49%), Gaps = 43/392 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN L   L K +  +  ++  K+++    FP ++T++ L++ F K+GR+    + L   
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +   F P+AVT+TS+I GLC   R+ E    F + R    EPD  TY  LI+G  +    
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  ++ +M       G V   +TVTYN I+DGLCK G V +A   FL M++      V
Sbjct: 376 PKAHRVYRQMLQS----GTVV--STVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 429

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA------ 342
           VTY++++ GFC   + + A  LF  M+D+G +P++V++++I+  LC+ GK+ KA      
Sbjct: 430 VTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEK 489

Query: 343 ------------------------------SRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
                                           L E M+ +G +PN ++Y+ L+DG C   
Sbjct: 490 LLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAG 549

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            ++   ++F  M S G   DVV +NTLI W C    V+EAL ++ E L +   P   +Y 
Sbjct: 550 GLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYW 608

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +L   L    ++E A  L   M+    A   Y
Sbjct: 609 SLLDALSRCERMEEARLLSFHMKLQGCAPRHY 640



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 220/495 (44%), Gaps = 82/495 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ I + M+    SP  + ++ ++   L+K    +    +F  +   G  PD + ++ 
Sbjct: 128 DEAMAILEQMVEKGNSPT-LKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186

Query: 148 LINCFCKMGRVSHGFVVLGRILR-SC---FTPNAV------------------------- 178
           LI+   K+G++    V L +++   C     P+ V                         
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246

Query: 179 ---------TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                    TF  L+  LC   R  EA A   K     C P +FTY +L++G  + G   
Sbjct: 247 DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            AL   +E      E G +  P+ VTY +IIDGLCK G V++  E F +M++    PD V
Sbjct: 307 EALLQLKEAV----ERGFI--PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 360

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I GF  A    +A R++ +M+  G     VT+++I+D LCK G++ +A      M
Sbjct: 361 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 420

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             RG      TY+ L+DG+C    +  A +LF  M   GC  ++VSYN +I   C+   +
Sbjct: 421 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 480

Query: 410 EEA------------------------------------LSLYSEMLSKGIKPTVVTYNT 433
            +A                                    + L+  M+S+G  P + +Y+ 
Sbjct: 481 AKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSI 540

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G+     +E  L++F EM    VA D   +N  I  LC +G V EALE+FR + + +
Sbjct: 541 LMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERR 599

Query: 494 YELNIVSYNCLIDGL 508
              +  SY  L+D L
Sbjct: 600 SAPDAWSYWSLLDAL 614



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 157/301 (52%), Gaps = 14/301 (4%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D      L+NGLC+TG    A+ L +EM          C P+ V +  +I+GLC+E  +D
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---------CSPDMVAFTVVINGLCREKRLD 58

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +A  +  +       PD VTY   I G C A   ++A +L  +M ++   P  VT++ ++
Sbjct: 59  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALV 118

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D L K G++D+A  +LE M+ +G +P   TY  +IDG     +++ AR++FV M  NGC 
Sbjct: 119 DGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR 178

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEML----SKGIKPTVVTYNTLFLGLFEIHQVER 446
            D   Y  LI+   K   ++EAL   ++M+    ++G++P VV +N +   L     +E 
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL  FDE+  + +    +T+N  +  LCK+    EA+   + + + +    + +Y  L+D
Sbjct: 239 ALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297

Query: 507 G 507
           G
Sbjct: 298 G 298



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +T     L++G C T ++D A  L   M    C  D+V++  +IN  C+ K ++EA S+ 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
              +  G +P  VTYN    GL +  +V+ A +L  +M        T TY   +DGL K+
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G + EA+ +   + +      + +Y  +IDGL
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGL 156



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 8/124 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTV---LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P V +FN     L +    DTV   + LF+ + S G  P+++++SIL++  C+ G +   
Sbjct: 497 PDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLIN 220
             +   ++     P+ V F +LI+ LC   R+ EA  +F +  R  A  PD ++Y +L++
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA--PDAWSYWSLLD 612

Query: 221 GLCR 224
            L R
Sbjct: 613 ALSR 616


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 203/433 (46%), Gaps = 14/433 (3%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N+ +P  A  +F +  R       V ++N     L K  H      +F  +      P+I
Sbjct: 13  NIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNI 72

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           YT+ I++   C   +      +L  +     TP       L+  LC   ++  A  L+ K
Sbjct: 73  YTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELY-K 131

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                C  D  +YN L  GLC+      AL +F EM     E  VV  P+ +TYN ++ G
Sbjct: 132 RLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEME----ENAVV--PSLLTYNGLLYG 185

Query: 263 LCKEGFVDKAKELFLKM----KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            C+ G +++A  L  +M    K  ++ PD+ +Y +VI GFC A     A+ +   M+  G
Sbjct: 186 YCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSG 245

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P+VVTF+ ++D LC  GK+D+A+ + E M+ R   P   TY  LI G+    +ID A 
Sbjct: 246 CSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKAN 305

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             FV M   G   +V +Y  LI   C    VE+AL +   M S G +P VVTY  +   L
Sbjct: 306 DYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGAL 365

Query: 439 FEIHQVERALKLFDEMRRNHVA---ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            +  Q+ERA KLF++   +  A    D+Y Y+  +  LC+    LEA E F  + +SK  
Sbjct: 366 CKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLV 425

Query: 496 LNIVSYNCLIDGL 508
                Y  + DGL
Sbjct: 426 AKPHIYKAMADGL 438



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 183/395 (46%), Gaps = 38/395 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  IFD ML      P + ++ I+   L  +   D  L L + + S  L P  +  ++
Sbjct: 54  SKARKIFDDML-YKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNM 112

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++C CK G+V   + +  R+   C + + +++  L  GLC   +I  A A+F +    A
Sbjct: 113 LVSCLCKNGKVDAAYELYKRLSDEC-SLDRISYNMLTYGLCKADQIDRALAVFGEMEENA 171

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
             P + TYN L+ G CR G    A+ L EEM  G     VV                   
Sbjct: 172 VVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQL 231

Query: 249 --------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
                         C PN VT+NT++DGLC  G +D+A  +F  M + N  P  VTYT +
Sbjct: 232 PTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVL 291

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G   A   ++A   F++M+ +GV+P+V T++ ++  LC   K++ A  +L+ M   G 
Sbjct: 292 ITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGR 351

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLF---VSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            PN  TY  +I   C   +I+ A KLF   +   +  C  D  +Y+T++ W C+     E
Sbjct: 352 EPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLE 411

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           A   +  M+   +      Y  +  GL  + + E+
Sbjct: 412 AYEYFLRMVESKLVAKPHIYKAMADGLELVQETEK 446



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 14/308 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL----NSAGLFPDIY 143
           + AL +F  M      P  ++   +L+G   +    +  ++L + +      + + PD+Y
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYG-YCRAGRMEQAMTLLEEMIEGKKGSDVVPDMY 216

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           +++ +I+ FCK  ++     VL R+++S  +PN VTF +L+ GLC   ++ EA A+F   
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYM 276

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               CEP   TY  LI G  R      A + F +M     E      PN  TY  +I GL
Sbjct: 277 VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVE------PNVYTYTALIGGL 330

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV---Q 320
           C    V+ A E+  +M      P+VVTYT VI   C       A +LF + M       +
Sbjct: 331 CDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCK 390

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD   +S I+  LC+  K  +A      M+   +    + Y  + DG  L  + +   ++
Sbjct: 391 PDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERV 450

Query: 381 FVSMESNG 388
            +   ++G
Sbjct: 451 CLEASAHG 458



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 3/216 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN L   L      D   ++F+ +      P   T+++LI    +  R+      
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDY 307

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR    PN  T+T+LI GLC  +++ +A  +  +      EP+V TY  +I  LC+
Sbjct: 308 FVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCK 367

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  LF    +  G     CKP++  Y+TI+  LC++    +A E FL+M +  +
Sbjct: 368 GGQIERATKLFN---DAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKL 424

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
                 Y ++  G     +  + +R+ +E    G++
Sbjct: 425 VAKPHIYKAMADGLELVQETEKVERVCLEASAHGIE 460


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 209/422 (49%), Gaps = 9/422 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++A C+ D M       P V  ++ L     +  + D    + K +++AG+ P+  T+ 
Sbjct: 329 PDQAKCLLDEM-SCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYD 387

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI   CK+GR+     +L ++ +  +  + +T+  +I+G   +    EA  L  + R  
Sbjct: 388 NLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKG 447

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              P+V+TY+ +INGLC+ G +  A  L E+M A+G        KPN   Y  +I G C+
Sbjct: 448 GISPNVYTYSIIINGLCQIGESERASGLLEQMIADG-------LKPNAFVYAPLISGYCR 500

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG    A E   KM  EN+ PD+  Y S+I G       +EA   + EM+++G QP+  T
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT 560

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +  ++      G ++KA +LL  M+  G+NPN + Y  +++GY  +D ++       SM 
Sbjct: 561 YGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSML 620

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G M D   Y  +I+    +  ++ A+S+ S +   G+ P  + Y +L  G  +   +E
Sbjct: 621 EKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADME 680

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A+ L DEM +  +      YN  IDG CKS  +  A  +F +I       N V+Y  LI
Sbjct: 681 KAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLI 740

Query: 506 DG 507
           DG
Sbjct: 741 DG 742



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 209/436 (47%), Gaps = 23/436 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSS-----------------FNILFGCLAKNKHYDTVLSLFK 131
           +A  + D M+R +P+PP V S                  ++L     K         +  
Sbjct: 138 QANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVL 197

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
            +   GL P +   + L+    +   +   + V G +  +  +P+  T+++LI+  C   
Sbjct: 198 LMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVR 257

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
            +  A  +  + R   C  +V TYNTLI GLCR G    A    +EM     ++G+V  P
Sbjct: 258 DLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME----DYGLV--P 311

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           +  TY  II+GLCK G  D+AK L  +M    + P+VV Y+++I GF    + +EA ++ 
Sbjct: 312 DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIV 371

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM   GVQP+ +T+  ++  LCK G+M +ASR+L+ M   G   +T TYN +I+G+   
Sbjct: 372 KEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQ 431

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
              + A  L   M   G   +V +Y+ +IN  C+  + E A  L  +M++ G+KP    Y
Sbjct: 432 HNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  G         A +   +M R ++  D Y YN+ I GL   G + EA+E +  + +
Sbjct: 492 APLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE 551

Query: 492 SKYELNIVSYNCLIDG 507
             ++ N  +Y  LI G
Sbjct: 552 KGFQPNDFTYGGLIHG 567



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 196/399 (49%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N++     +  + +    L   +   G+ P++YT+SI+IN  C++G       +L ++
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     PNA  +  LI G C E     A     K       PD++ YN+LI GL   G  
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+  ++EM     E G   +PN  TY  +I G    G ++KA++L  +M +  +NP+ 
Sbjct: 540 DEAIEYYDEML----EKGF--QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y  ++ G+  +++  +       M+++G+ PD   + +++  L  +G M  A  +L +
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           +   G+ P++  Y +LI G+C    ++ A  L   M   G    +  YN LI+ +CK+ D
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDD 713

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  A ++++ ++ KG+ P  VTY TL  G  +   +  A+ L++EM    VA D + Y+ 
Sbjct: 714 ISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSV 773

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              G   SG + +AL +   +    Y + I S+N L+ G
Sbjct: 774 LAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHG 811



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 207/495 (41%), Gaps = 87/495 (17%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +G +      EA  + + M R     P V +++I+   L +    +    L +++ + GL
Sbjct: 426 EGHLRQHNKEEAFLLLNEM-RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGL 484

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P+ + ++ LI+ +C+ G  S     L ++ R   TP+   + SLI GL    ++ EA  
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------------GEF 245
            + +      +P+ FTY  LI+G    G+   A  L  +M N               G F
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYF 604

Query: 246 ------------------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                             G++  P+   Y  +I  L   G +  A  +   ++   + PD
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLM--PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + Y S+I GFC A D  +A  L  EM  +G++P +  ++ ++D  CK+  +  A  +  
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD--------------- 392
            +I +G+ PN  TY TLIDGYC    I  A  L+  M + G   D               
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSG 782

Query: 393 -------------------VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
                              + S+NTL++ +CK   ++E +     M+ K I P+++T   
Sbjct: 783 DLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVEN 842

Query: 434 LFLGLFEIHQVERALKLFDEMRR---NHVAADTYT----------------YNNFIDGLC 474
           + +GL E  ++  A  +F E+++   +H   D  +                 +N I   C
Sbjct: 843 IVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHC 902

Query: 475 KSGFVLEALELFRAI 489
           K G++ +AL L  A+
Sbjct: 903 KQGYLDKALMLHDAL 917



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 36/329 (10%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           K+ + + V S  K +   GL PD   + I+I+     G +     VL  I ++   P+++
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
            + SLI G C  + + +A  L  +      EP +  YN LI+G C++     A N+F   
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS- 723

Query: 239 ANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                   ++CK   PN VTY T+IDG CK G +  A +L+ +M  E + PD   Y+ + 
Sbjct: 724 --------IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLA 775

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G   + D  +A  +  EM+ +G    + +F+ ++   CK GK+ +  + L +M+ + + 
Sbjct: 776 AGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIV 834

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH---------------------DVV 394
           P+  T   ++ G     K+  A  +FV ++     H                     DV+
Sbjct: 835 PSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVI 894

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKG 423
             + +I  +CK   +++AL L+  +++KG
Sbjct: 895 --HNMIQSHCKQGYLDKALMLHDALVAKG 921


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           + + +L  AG+ P+    ++L+    + G+++    +   +LR    P  VTF +L+ G+
Sbjct: 230 AFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGM 289

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C  S +  A AL          PDV+TY   + GLC+ G    A+ +FEEM     E GV
Sbjct: 290 CKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMR----ERGV 345

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              PNTV + T+ID  CKEG V    EL  +M    I  D+V Y ++  G C   D   A
Sbjct: 346 --NPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +  EM + G++PD VT++ ++D  CK G++D A  + + M   GV  +  TY TLI G
Sbjct: 404 NDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISG 463

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
              + +   + ++   M   G   D  +Y  +I+ +CKN DV+    L  EM +KG KP 
Sbjct: 464 LSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPG 523

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTYN +  G   + Q++ A  L + M    V  D  TYN  +DG CK G V +A EL  
Sbjct: 524 VVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS 583

Query: 488 A 488
           A
Sbjct: 584 A 584



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 181/343 (52%), Gaps = 10/343 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD MLR    PP V +FN L   + K    ++  +L   +  AG+ PD+YT+   +   
Sbjct: 266 MFDEMLR-RGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGL 324

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR+     +   +      PN V FT+LI   C E  +     L  +      + D+
Sbjct: 325 CKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDL 384

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN L NGLCR      A ++ EEM N NG      KP+ VTY T+IDG CKEG +D A
Sbjct: 385 VAYNALANGLCRVRDLKAANDIVEEMRN-NG-----LKPDKVTYTTLIDGFCKEGELDMA 438

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+  +M DE +  D VTYT++I G   +    +++R+  EMM+ G++PD  T+++++D 
Sbjct: 439 MEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDA 498

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CKN  +    +LL+ M  +G  P   TYN +++G+C+  ++ +A  L  +M + G   D
Sbjct: 499 FCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPD 558

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            ++YN L++ +CK+  V +A  L S   +KG+      Y +L 
Sbjct: 559 DITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLI 598



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 6/315 (1%)

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA A + +       P+   +N L+  + R+G    A N+F+EM       GV   P 
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEML----RRGV--PPT 278

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VT+NT++ G+CK   ++ A  L   M    + PDV TY + ++G C A    +A  +F 
Sbjct: 279 VVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFE 338

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM ++GV P+ V F+ ++D  CK G +     L   M  RG+  +   YN L +G C   
Sbjct: 339 EMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVR 398

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A  +   M +NG   D V+Y TLI+ +CK  +++ A+ +  EM  +G+    VTY 
Sbjct: 399 DLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYT 458

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  GL +  +   + ++  EM    +  D  TY   ID  CK+  V    +L + +++ 
Sbjct: 459 TLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNK 518

Query: 493 KYELNIVSYNCLIDG 507
             +  +V+YN +++G
Sbjct: 519 GRKPGVVTYNVVMNG 533



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 128/240 (53%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A   +L++ D  + P+   +  ++R    +     A+ +F EM+ +GV P VVTF+ 
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M  +CK   ++ A+ L  LM   GV P+ YTY   + G C   +I  A ++F  M   G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V + TLI+ +CK  +V   L L+ EM ++GIK  +V YN L  GL  +  ++ A 
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + +EMR N +  D  TY   IDG CK G +  A+E+ + + D    L+ V+Y  LI GL
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 211/424 (49%), Gaps = 10/424 (2%)

Query: 87  PNEALCIFDYM--LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           P  +L +F  +  LR+HP+     +FN+L             L+    +   GL PD  T
Sbjct: 189 PQASLDVFRSLIELRLHPN---HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVT 245

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++ L+N  C+ G +     +L R+ R    P   T+ +L+        I +A  +     
Sbjct: 246 YNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT 305

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
            +  EPD+ TYN L  GLC+ G    A  L +EM     E      P+ VTYNT++D   
Sbjct: 306 AYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM-----ERLSTALPDVVTYNTLVDACF 360

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K      A  L  +M+D+ + P +VT+  V++  C      EA     ++ ++G+ PDV+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++D  CK G + KA  L++ M+ +G+  +T+T NT++   C   + + A +L  S 
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G + D VSY T++  Y K  + E AL L+ +M+ + + P++ TYNTL  GL  + ++
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A+   +E+    +  D  TYN  I   CK G +  A      + ++ ++ ++V+ N L
Sbjct: 541 KEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 505 IDGL 508
           ++GL
Sbjct: 601 MNGL 604



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 196/406 (48%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L    A+         + + + + G  PD+ T+++L    C+ G+V   F +
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRL 335

Query: 165 LGRILR-SCFTPNAVTFTSLIKGLCAESRIM-EAAALFTKHRVFACEPDVFTYNTLINGL 222
              + R S   P+ VT+ +L+   C + R   +A  L  + R    +P + T+N ++  L
Sbjct: 336 KDEMERLSTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    AL   E++A    E G+   P+ +TYNT+ID  CK G V KA  L  +M  +
Sbjct: 395 CKEGKLEEALGKLEKIA----EEGLA--PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +  D  T  +V+   C    + +A+ L      +G  PD V++  +M    K    + A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            RL + MI R + P+  TYNTLI G C  +++  A      +   G + D  +YN +I+ 
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YCK  D+E A   +++M+    KP VVT NTL  GL    ++++ALKLF+         D
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN  I  +CK G V  AL  F  +     + +  +YN ++  L
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 195/391 (49%), Gaps = 11/391 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSL---FKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P + ++N+L   L +    D    L    +RL++A   PD+ T++ L++   K    S  
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTA--LPDVVTYNTLVDACFKWRCSSDA 368

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +L  +      P  VT   ++K LC E ++ EA     K       PDV TYNTLI+ 
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G+   A  L +EM  G G      K +T T NT++  LCK    + A+EL      
Sbjct: 429 YCKAGNVAKAFTLMDEMV-GKG-----LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ 482

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               PD V+Y +V+  +    +   A RL+ +M+++ + P + T++ ++  LC+  ++ +
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A   L  ++ +G+ P+  TYN +I  YC    +++A +    M  N    DVV+ NTL+N
Sbjct: 543 AIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C +  +++AL L+   + KG K  V+TYNTL   + ++  V+ AL  FD+M    +  
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           D +TYN  +  L ++G   EA  +   + DS
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 42/407 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + NI+   L K    +  L   +++   GL PD+ T++ LI+ +CK G V+  F +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++      +  T  +++  LC   R  +A  L          PD  +Y T++    +
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   AL L+++M     E  ++  P+  TYNT+I GLC+   + +A +   ++ ++ +
Sbjct: 502 EYNPEPALRLWDQMI----ERKLI--PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGL 555

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY  +I  +C   D   A R   +M++   +PDVVT + +M+ LC +GK+DKA +
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E  + +G   +  TYNTLI   C    +D A   F  ME  G   D  +YN +++   
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675

Query: 405 KNKDVEEALSLYSEMLSKG----------IKPT--------------------------V 428
           +    EEA ++  ++   G          +KP+                          +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            TY     GL    Q++ A  + DEM +  +  D+ TY   ++GL K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 47/290 (16%)

Query: 87  PNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           P  AL ++D M+  ++ PS   +S++N L   L + +     +     L   GL PD  T
Sbjct: 505 PEPALRLWDQMIERKLIPS---ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++I+I+ +CK G + + F    +++ + F P+ VT  +L+ GLC   ++ +A  LF    
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               + DV TYNTLI  +C+ G    AL+ F++M           +P+  TYN ++  L 
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG------LQPDAFTYNVVLSALS 675

Query: 265 KEGFVDKAKELFLKMKDEN----------INPD--------------------------V 288
           + G  ++A  +  K+ D            + P                           +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            TY   + G C      EAK +  EMM +G+  D  T+  +M+ L K  K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/405 (33%), Positives = 202/405 (49%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S N     LAK    D     F+ +  AG+   ++T++I+I   CK G +     +
Sbjct: 215 PKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSL 274

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++ +   TP+ VT+ SLI G      + E+  LF + +   CEPDV TYN LIN  C+
Sbjct: 275 FHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCK 334

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +   EM N         KPN VTY+T+ID LCKE  + +A +  L M+   +
Sbjct: 335 YEQMPKAFHFLHEMKNSG------LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGL 388

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+  TYTS+I   C A   ++A +L  EM+   V  +VVT++ ++D LCK G+M +A  
Sbjct: 389 SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAED 448

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI  GV PN  TY  L+ G+    ++++A +L   ++      D++ Y T+I   C
Sbjct: 449 LFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLC 508

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
               +EE   + SEM + GI+   V Y       F+  +   AL L  EM    V     
Sbjct: 509 SQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV 568

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY-NCLIDGL 508
           T+   IDGLCK G V EA++ F  + D   + N V+    LIDGL
Sbjct: 569 TFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGL 613



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 207/420 (49%), Gaps = 8/420 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  +F  M +M  +P  V+ +N L     K    D    LF+ +   G  PD+ T++ LI
Sbjct: 271 AKSLFHQMKQMGLTPDIVT-YNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALI 329

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           NCFCK  ++   F  L  +  S   PN VT+++LI  LC E  + +A       R     
Sbjct: 330 NCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLS 389

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+ FTY +LI+  C+ G+   AL L +EM      F      N VTY T++DGLCKEG +
Sbjct: 390 PNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF------NVVTYTTLLDGLCKEGRM 443

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A++LF  M    + P++ TYT+++ G         A  L  E+ ++ ++PD++ +  I
Sbjct: 444 MEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTI 503

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LC   K+++   ++  M   G+  N+  Y   +D Y  T K   A  L   M   G 
Sbjct: 504 IWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGV 563

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL-GLFEIHQVERAL 448
              +V++  LI+  CK   VEEA+  ++ M    ++P  V   T  + GL + + +E A 
Sbjct: 564 EVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAK 623

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           KLFDEM+  ++  D   Y   IDG  K     EAL +   + +   EL++ +Y  L+ GL
Sbjct: 624 KLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL 683



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 208/409 (50%), Gaps = 16/409 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR--VSHGF 162
           P    F+ LF    +    +     F R+    +FP   + +  +    K G+  +S+ F
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 163 ---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
              +V   I +S FT N      +I  +C E  ++ A +LF + +     PD+ TYN+LI
Sbjct: 240 FRDMVGAGIAQSVFTYNI-----MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLI 294

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           +G  + G    +  LFEEM +      V C+P+ +TYN +I+  CK   + KA     +M
Sbjct: 295 DGYGKLGLLDESFCLFEEMKD------VGCEPDVITYNALINCFCKYEQMPKAFHFLHEM 348

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           K+  + P+VVTY+++I   C  +   +A +  ++M   G+ P+  T++ ++D  CK G +
Sbjct: 349 KNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYL 408

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
             A +L + M+   V  N  TY TL+DG C   ++  A  LF +M   G   ++ +Y  L
Sbjct: 409 SDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTAL 468

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           ++ + KNK VE AL L  E+  K IKP ++ Y T+  GL   +++E    +  EM+   +
Sbjct: 469 VHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGI 528

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            A++  Y   +D   K+G  +EAL L + + D   E+ IV++  LIDGL
Sbjct: 529 RANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGL 577



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 4/296 (1%)

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           F  N  +  L  +   +   ++FE + +       VC P    ++ +     + G +++A
Sbjct: 146 FDANFFLKELISSRRILPGFDVFEVLWSTRN----VCVPGFGVFDALFSVFIELGMLEEA 201

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            + F +M    + P   +  + +         + + + F +M+  G+   V T+++++  
Sbjct: 202 GQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGY 261

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           +CK G M  A  L   M   G+ P+  TYN+LIDGY     +D +  LF  M+  GC  D
Sbjct: 262 MCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPD 321

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           V++YN LIN +CK + + +A     EM + G+KP VVTY+TL   L + H +++A+K   
Sbjct: 322 VITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLL 381

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +MRR  ++ + +TY + ID  CK+G++ +AL+L   +   +   N+V+Y  L+DGL
Sbjct: 382 DMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGL 437



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 167/389 (42%), Gaps = 77/389 (19%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ L   L K       +     +   GL P+ +T++ LI+  CK G +S    +
Sbjct: 355 PNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKL 414

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF-----------------------T 201
              +L+     N VT+T+L+ GLC E R+MEA  LF                        
Sbjct: 415 ADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIK 474

Query: 202 KHRV------------FACEPDVFTYNTLINGLC-------------------------- 223
             RV               +PD+  Y T+I GLC                          
Sbjct: 475 NKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVI 534

Query: 224 ---------RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
                    +TG T+ ALNL +EM +   E  +V      T+  +IDGLCK+G V++A +
Sbjct: 535 YTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV------TFCVLIDGLCKKGLVEEAID 588

Query: 275 LFLKMKDENINPD-VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            F +M D N+ P+ V   T++I G C  N    AK+LF EM D+ + PD + ++ ++D  
Sbjct: 589 YFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGN 648

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+    +A  +   M   G+  + + Y +L+ G    + +  AR     M   G + D 
Sbjct: 649 LKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDE 708

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +    L+  Y +   ++EA+ L+ E+L K
Sbjct: 709 ILCIRLLRKYYELGSIDEAIELHDELLKK 737


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 214/435 (49%), Gaps = 38/435 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L KN   D    L   ++S G  PD  +++ LI+  CK+G+V      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R L   FTP+   + +LI G+C E    EA  L  +      +P+V +Y T+IN L  
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 225 TGHTIVALNLFEEM-ANG------------NGEF------------------GVVCKPNT 253
            G+  ++L +  +M A G             G F                  GVV  PN 
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV--PNV 351

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V YN ++ GLC +  +  A  +F +M+     P+V TY+++I G+  A D + A  ++  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  G  P+VV ++ ++D LC+N   ++A  L+E M      PNT T+NT I G C + +
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A K+F  M ++GC  +  +YN L++   K++   EA  L  +M  +GI+  +VTYNT
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G      +  AL+L  +M       D  T N  ID  CK G V  A++L   +   K
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 494 YELNIVSYNCLIDGL 508
           +  +I++Y  LI G+
Sbjct: 592 WHPDIIAYTSLISGI 606



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 200/403 (49%), Gaps = 11/403 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L     +  +  ++  +   G+ P+++T++IL+   CK  RV     +
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ V++T+LI  LC   ++ EA  L       +  P V  YN LING+C+
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCK 258

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L +EM N          PN ++Y TII+ L   G V+ +  +  KM     
Sbjct: 259 EYTFEEAFQLLDEMMNKG------IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P++ T+TS+I+GF      +EA   +  M+ +GV P+VV ++ +M  LC    +  A  
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M   G  PN  TY+ LIDGY     +D A +++  M ++GC  +VV+Y  +++  C
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +N    +A  L   M  +   P  VT+NT   GL    +V+ A+K+FD+M  +    +T 
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  +D L K     EA  L + +     ELN+V+YN +I G
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 194/405 (47%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   + K   ++    L   + + G+ P++ +++ +IN     G V     V
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++     +PN  TFTSLIKG   +    EA   + +       P+V  YN L++GLC 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 225 TGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                 A+++F +M  NG       C PN  TY+ +IDG  K G +D A E++  M    
Sbjct: 364 KRSLGDAVSVFNQMEING-------CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P+VV YT ++   C  + +N+A  L   M  +   P+ VTF+  +  LC +G++D A 
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++ + M   G  PNT TYN L+D      +   A  L   ME  G   ++V+YNT+I  Y
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    + EAL L  +M+ +G KP  +T N +     +  +V  A++L D +       D 
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y + I G+C    V EA+   R +       N+ ++N L+  L
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 30/396 (7%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T  EA  + D M+      P V S+  +   L+   + +  L++  ++ + G  P+++T 
Sbjct: 261 TFEEAFQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + LI  F   G          R++R    PN V + +L+ GLC++  + +A ++F +  +
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------------- 248
             C P+V TY+ LI+G  + G    A  ++  M        VV                 
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439

Query: 249 ------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
                       C PNTVT+NT I GLC  G VD A ++F +M +    P+  TY  ++ 
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                  + EA  L  +M  +G++ ++VT++ I+   C  G + +A  LL  M+ RG  P
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  T N +ID YC   K++ A +L   + +     D+++Y +LI+  C +  VEEA+   
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYL 619

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             MLS+GI P V T+N L   LF       A++  D
Sbjct: 620 RRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 178/371 (47%), Gaps = 15/371 (4%)

Query: 37  SISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLIT-------PNE 89
            I  N  SY T  + L ++  + +   A L K     C  +     +LI         +E
Sbjct: 276 GIDPNVISYTTIINALSDAGNVEL-SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHE 334

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL  +D M+R     P V ++N L   L   +     +S+F ++   G  P++ T+S LI
Sbjct: 335 ALDFWDRMIR-EGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALI 393

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + + K G +     V   ++     PN V +T ++  LC  S   +A  L    +V  C 
Sbjct: 394 DGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  T+NT I GLC +G    A+ +F++M N        C PNT TYN ++D L K+   
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG------CFPNTTTYNELLDSLLKDRRF 507

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  L   M+   I  ++VTY ++I G+C A    EA  L  +M+ +G +PD +T +++
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK GK++ A +L++ +     +P+   Y +LI G C    ++ A      M S G 
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627

Query: 390 MHDVVSYNTLI 400
             +V ++N L+
Sbjct: 628 SPNVATWNVLV 638



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 141/310 (45%), Gaps = 37/310 (11%)

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           +AL  F+ +AN         K   +TY  +I+ L  E  +D  + L  +MK E I+    
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            + SVI  +  A    +A + F  M D  V+P V  ++ I+D L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS-------------- 395
              G+ PN +TYN L+   C  +++D A KL V M S GC  D VS              
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 396 ----------------YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
                           YN LIN  CK    EEA  L  EM++KGI P V++Y T+   L 
Sbjct: 233 KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNI 498
           +   VE +L +  +M     + + +T+ + I G    G   EAL+ + R IR+     N+
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP-NV 351

Query: 499 VSYNCLIDGL 508
           V+YN L+ GL
Sbjct: 352 VAYNALMHGL 361


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 220/421 (52%), Gaps = 9/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+      P + +F+ L     K ++  TV+ L + + S GL P+IYT++I 
Sbjct: 212 EALEVYRRMVS-EGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTIC 270

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    + G++   + ++ R+      P+ VT+T LI  LC   ++ +A  LFTK +  + 
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH 330

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY TL++     GH      ++ EM A+G         P+ VT+  +++ LCK G
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYA-------PDVVTFTILVNALCKAG 383

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A +L   M+ + + P++ TY ++I G   AN  ++A  LF  M   GV+P   T+ 
Sbjct: 384 RINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D   K+G   KA    E M  RG+ PN    N  +       ++  A+ +F  ++S+
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YN ++  Y K   V+EA+ L SEM     +P V+  N+L   L++  +VE A
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++F  M   ++A    TYN  + GL K G + +A++LF ++       N +++N L+D 
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623

Query: 508 L 508
           L
Sbjct: 624 L 624



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 215/411 (52%), Gaps = 13/411 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+C+F  M      P  V+ +  L    +   H D V  ++  + + G  PD+ T +I
Sbjct: 316 DDAMCLFTKMKSSSHKPDKVT-YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N  CK GR++  F +L  + +    PN  T+ +LI GL   +R+ +A  LF+      
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            EP  +TY  LI+   ++GH   AL  FE+M A G         PN V  N  +  L + 
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG-------IAPNIVACNASLYSLAEM 487

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G + +AK +F ++K   + PD VTY  +++ +      +EA +L  EM     +PDV+  
Sbjct: 488 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 547

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D L K G++++A ++   M    + P   TYN L+ G     +I  A +LF SM  
Sbjct: 548 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +GC  + +++NTL++  CKN +V+ AL ++ +M +   +P V+T+NT+  G  + +Q++ 
Sbjct: 608 HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           A+ LF +M++  +  D  T    + G+ KSG + +A   FR   D  Y++ 
Sbjct: 668 AIWLFHQMKK-LLRPDHVTLCTLLPGVIKSGQIEDA---FRITEDFFYQVG 714



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 208/416 (50%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R       V ++ I+F  L          S  +++  AG   + Y+++ LI+  
Sbjct: 146 VFDLMQR-QIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFL 204

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G       V  R++     P+  TF++L+        I     L  +       P++
Sbjct: 205 LQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNI 264

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +TY   I  L R G    A  + + M +        C P+ VTY  +ID LC    +D A
Sbjct: 265 YTYTICIRVLGRDGKIDEAYRIMKRMDDDG------CGPDVVTYTVLIDALCTARKLDDA 318

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF KMK  +  PD VTY +++  F      ++ ++++ EM   G  PDVVTF+++++ 
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNA 378

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G++++A  LL+ M  +GV PN +TYNTLI G    +++D A  LF +MES G    
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPT 438

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             +Y  LI+++ K+    +AL  + +M ++GI P +V  N     L E+ ++  A  +F+
Sbjct: 439 AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFN 498

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           E++ + +A D+ TYN  +    K G V EA++L   +   + E +++  N LID L
Sbjct: 499 ELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 212/491 (43%), Gaps = 78/491 (15%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             +A+ +F+ M   H   P   +FN L  CL KN   D  L +F ++ +    PD+ T + 
Sbjct: 596  QKAVQLFESM-NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654

Query: 148  LINCFCKM----------------------------------GRVSHGFV---------- 163
            +I+ F K                                   G++   F           
Sbjct: 655  IIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVG 714

Query: 164  ----------VLGRILRSCFTPNAVTFTS----------------LIKGLCAESRIMEAA 197
                      V+G IL    T  A+ F                  +IK LC   +   A 
Sbjct: 715  SNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVAR 774

Query: 198  ALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +F K  +    +P +  YN LI+G     +  VA NLFEEM +        C P+T TY
Sbjct: 775  NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG------CAPDTFTY 828

Query: 257  NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            N++ID   K G +++  +L+ +M      P+ +TY  VI     +N  ++A  L+  ++ 
Sbjct: 829  NSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVS 888

Query: 317  QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
                P   TF  ++D L K+G++D A  + + M+  G  PN+  YN L++GY     +D 
Sbjct: 889  GDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDT 948

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            A + F  M   G   D+ SY  L++  C    V++AL  + ++   G+ P +V YN +  
Sbjct: 949  ACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMIN 1008

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            GL    + E AL LF EM+   +  D YTYN+ I  L   G + EA +++  ++    + 
Sbjct: 1009 GLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKP 1068

Query: 497  NIVSYNCLIDG 507
            N+ +YN LI G
Sbjct: 1069 NVFTYNALIRG 1079



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 169/331 (51%), Gaps = 7/331 (2%)

Query: 148  LINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I   CK  + S    V  +  +     P    +  LI G      +  A  LF + +  
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             C PD FTYN+LI+   ++G      +L++EM          CKPNT+TYN +I  L K 
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG------CKPNTITYNMVISNLVKS 873

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              +DKA +L+  +   + +P   T+  +I G   +   ++A  +F  M+  G +P+   +
Sbjct: 874  NRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIY 933

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +++++   K G +D A    + M+  G+ P+  +Y  L+D  C+  ++D A   F  ++ 
Sbjct: 934  NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   D+V+YN +IN   +++  EEALSL+ EM ++GI P + TYN+L L L  +  +E 
Sbjct: 994  AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
            A K+++E++   +  + +TYN  I G   SG
Sbjct: 1054 AGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 209/452 (46%), Gaps = 35/452 (7%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            EA  +F  M  M+ +P  V ++NIL   L K       + LF+ +N  G  P+  T + L
Sbjct: 562  EAWQMFCRMEEMNLAPT-VVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            ++C CK   V     +  ++      P+ +TF ++I G   +++I  A  LF + +    
Sbjct: 621  LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-L 679

Query: 209  EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------------------------ 244
             PD  T  TL+ G+ ++G    A  + E+     G                         
Sbjct: 680  RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739

Query: 245  -FG------VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIR 296
             FG       +CK ++V    II  LCK      A+ +F+K   E  + P +  Y  +I 
Sbjct: 740  LFGERLVCRAICKDDSVLI-PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLID 798

Query: 297  GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
            GF   ++   A  LF EM   G  PD  T++ ++D   K+GK+++   L + M+ RG  P
Sbjct: 799  GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858

Query: 357  NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
            NT TYN +I     ++++D A  L+ ++ S        ++  LI+   K+  +++A  ++
Sbjct: 859  NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF 918

Query: 417  SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
              M+  G +P    YN L  G  ++  V+ A + F  M +  +  D  +Y   +D LC +
Sbjct: 919  DGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978

Query: 477  GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G V +AL  F  ++ +  + ++V+YN +I+GL
Sbjct: 979  GRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 172/330 (52%), Gaps = 6/330 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +  +N+L     +  + +   +LF+ + SAG  PD +T++ LI+   K G+++  F +
Sbjct: 788  PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +L     PN +T+  +I  L   +R+ +A  L+         P   T+  LI+GL +
Sbjct: 848  YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            +G     L+   EM +G   +G  C+PN+  YN +++G  K G VD A E F +M  E I
Sbjct: 908  SGR----LDDAHEMFDGMVHYG--CRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             PD+ +YT ++   C A   ++A   F ++   G+ PD+V ++++++ L ++ + ++A  
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L   M  RG+ P+ YTYN+LI    +   I+ A K++  ++  G   +V +YN LI  Y 
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             + + E A  +Y +M+  G  P   T+  L
Sbjct: 1082 LSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 171/351 (48%), Gaps = 7/351 (1%)

Query: 117  LAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
            L K+K      ++F +     G+ P +  +++LI+ F ++  V   + +   +  +   P
Sbjct: 764  LCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAP 823

Query: 176  NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
            +  T+ SLI       +I E   L+ +     C+P+  TYN +I+ L ++     A++L+
Sbjct: 824  DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883

Query: 236  EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
              + +G+        P   T+  +IDGL K G +D A E+F  M      P+   Y  ++
Sbjct: 884  YNLVSGD------FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937

Query: 296  RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
             G+      + A   F  M+ +G++PD+ ++++++D LC  G++D A    E +   G++
Sbjct: 938  NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997

Query: 356  PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            P+   YN +I+G   + + + A  LF  M++ G + D+ +YN+LI        +EEA  +
Sbjct: 998  PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057

Query: 416  YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            Y E+   G+KP V TYN L  G       E A  ++ +M       +T T+
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 7/230 (3%)

Query: 103  SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
            SP P + F  L   L K+   D    +F  +   G  P+   ++IL+N + K+G V    
Sbjct: 892  SPTPCT-FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTAC 950

Query: 163  VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
                R+++    P+  ++T L+  LC   R+ +A   F K +    +PD+  YN +INGL
Sbjct: 951  EFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010

Query: 223  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
             R+  T  AL+LF EM N     G+V  P+  TYN++I  L   G +++A +++ +++  
Sbjct: 1011 GRSQRTEEALSLFHEMQNR----GIV--PDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064

Query: 283  NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             + P+V TY ++IRG+  + +   A  ++ +MM  G  P+  TF+ + ++
Sbjct: 1065 GLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPNQ 1114



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 39/297 (13%)

Query: 251 PNTV----TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
           PN V    T N +++ L     V+    +F  M+ + I  +V TY  + +         +
Sbjct: 118 PNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQ 177

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A     +M + G   +  +++ ++  L ++G   +A  +   M+  G+ P+  T++ L+ 
Sbjct: 178 APSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMV 237

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                  I     L   MES G   ++ +Y   I    ++  ++EA  +   M   G  P
Sbjct: 238 ASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGP 297

Query: 427 TVVTYNTLFLGLFEIHQVERAL-----------------------------------KLF 451
            VVTY  L   L    +++ A+                                   K++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EM  +  A D  T+   ++ LCK+G + EA +L   +R      N+ +YN LI GL
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 2/139 (1%)

Query: 368 YCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           + ++D I HA   F S+ E    +H   + N ++     ++ VE+   ++  M  + I+ 
Sbjct: 99  HSISDPI-HALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRR 157

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V TY  +F  LF    + +A    ++MR      + Y+YN  I  L +SGF  EALE++
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVY 217

Query: 487 RAIRDSKYELNIVSYNCLI 505
           R +     + ++ +++ L+
Sbjct: 218 RRMVSEGLKPSLKTFSALM 236


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 210/418 (50%), Gaps = 22/418 (5%)

Query: 101 HPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP   P  SS N L   L   K  D     F+      + PDIYT + +I+  C++G++ 
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI--MEAAALFTKHRVFA-CEPDVFTYN 216
               V   I      P+  T+ SLI G C +     M    +  K  V A   P   T+ 
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LING C+  +T  A+ +FEEM     + G+    + VTYN++I GLC EG V++  +L 
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMK----QQGIAA--SVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 277 LKMKDENINPDVVTYTSVIRGFCY------ANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            +M+D  ++P+ +T+  V++GFC       ANDW +       M ++ V+PDVV +++++
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG------MTERNVEPDVVIYNILI 376

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D   + GKM+ A  + E M  +G++PN  TYN LI G+  +     A  L   M+  G  
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DVV+YN LI   C   +V +A+ L  EM   G++P  +TYNT+  G  +   ++ A ++
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              M +    A+  TYN FI   C+ G + EA +L   + D     N ++Y  + +G+
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 185/385 (48%), Gaps = 45/385 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F   LR   SP  + +FN +   L +         + K + + GL P + T++ LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 154 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
           K G      H  ++L  ++ +  +P AVTF  LI G C  S    A  +F + +      
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
            V TYN+LI+GLC  G     + L EEM     + G+   PN +T+  ++ G CK+G + 
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMA 351

Query: 271 KAKELFLKMKDENINPDVV-----------------------------------TYTSVI 295
            A +    M + N+ PDVV                                   TY  +I
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GF  + DW  A  L  EM ++G++ DVVT++V++  LC  G++ KA +LL+ M   G+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN  TYNT+I G+C    I  A ++   ME      +VV+YN  I ++C+   ++EA  L
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDL 531

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFE 440
            +EML K + P  +TY T+  G+ E
Sbjct: 532 LNEMLDKCLVPNGITYETIKEGMME 556



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 54/122 (44%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N+L G L         + L   ++  GL P+  T++ +I  FC  G +   + +  
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+ +     N VT+   IK  C   ++ EA  L  +       P+  TY T+  G+   G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558

Query: 227 HT 228
           +T
Sbjct: 559 YT 560


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 164/279 (58%), Gaps = 6/279 (2%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V F +L+ GLC E R++EA AL  +      +P+  TY T++NG+C+ G T  ALNL 
Sbjct: 9   DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            +M   +       K + V Y  IID LCK+G   KA+ LF +M D+ I P+V+TY  +I
Sbjct: 69  RKMDESH------IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMI 122

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G C    W +A++L  +M++  V PDVVTF+ +++   K GK+ +A  L   M+ R + 
Sbjct: 123 DGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIF 182

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+T TYN+LIDG+C   ++D A+ +F  M S G   +V++ NTLI   C+ K V++ + L
Sbjct: 183 PDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKL 242

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
             EML +G+ P  V+YNTL  G  +   +  A  LF EM
Sbjct: 243 LHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C+ DV  +NTL+NGLCR G  + A  L + M   NG      +PN VTY TI++G+CK 
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVE-NGH-----QPNEVTYGTIVNGMCKM 58

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  D A  L  KM + +I  DVV YT++I   C     ++A+ LF EM D+G+ P+V+T+
Sbjct: 59  GDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  C  GK   A +LL  MI   V+P+  T+N LI+ +    KI  A +L+  M  
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
                D ++YN+LI+ +CK+  +++A  ++  M+SKG  P V+T NTL  G     +V+ 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            +KL  EM R  +  D+ +YN  I G C++G +  A +LF+ +
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 158/286 (55%), Gaps = 6/286 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G   D+   + L+N  C+ GRV     ++ R++ +   PN VT+ +++ G+C       A
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSA 64

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L  K      + DV  Y  +I+ LC+ GH   A NLF EM +  G F     PN +TY
Sbjct: 65  LNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHD-KGIF-----PNVLTY 118

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N +IDG C  G    A++L   M + N++PDVVT+ ++I  F      +EA+ L+ EM+ 
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + + PD +T++ ++D  CK+ ++D A  + +LM+ +G +PN  T NTLI G C   ++D 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
             KL   M   G + D VSYNTLI+ +C+  D+  A  L+ EM+S+
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 147/281 (52%), Gaps = 6/281 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +FN L   L +        +L  R+   G  P+  T+  ++N  CKMG       +L 
Sbjct: 10  VVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLR 69

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++  S    + V +T++I  LC +    +A  LFT+       P+V TYN +I+G C  G
Sbjct: 70  KMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYG 129

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L  +M   N        P+ VT+N +I+   KEG + +A+EL+ +M   NI P
Sbjct: 130 KWTDAEQLLRDMIESN------VDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFP 183

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D +TY S+I GFC  +  ++AK +F  M+ +G  P+V+T + ++   C+  ++D   +LL
Sbjct: 184 DTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLL 243

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             M+ RG+ P++ +YNTLI G+C    ++ A+ LF  M S 
Sbjct: 244 HEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 140/259 (54%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C+ + V +NT+++GLC+EG V +A+ L  +M +    P+ VTY +++ G C   D + A 
Sbjct: 6   CQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSAL 65

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M +  ++ DVV ++ I+D LCK+G   KA  L   M  +G+ PN  TYN +IDG 
Sbjct: 66  NLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGC 125

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K   A +L   M  +    DVV++N LIN + K   + EA  LY EML + I P  
Sbjct: 126 CSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDT 185

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TYN+L  G  +  +++ A  +FD M     + +  T N  I G C++  V + ++L   
Sbjct: 186 ITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHE 245

Query: 489 IRDSKYELNIVSYNCLIDG 507
           +       + VSYN LI G
Sbjct: 246 MLRRGLVPDSVSYNTLIHG 264



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 107/194 (55%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+++G Q DVV F+ +M+ LC+ G++ +A  L++ M+  G  PN  TY T+++G C    
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            D A  L   M+ +    DVV Y  +I+  CK+    +A +L++EM  KGI P V+TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G     +   A +L  +M  ++V  D  T+N  I+   K G + EA EL+R +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 494 YELNIVSYNCLIDG 507
              + ++YN LIDG
Sbjct: 181 IFPDTITYNSLIDG 194



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 111/229 (48%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M ++    DVV + +++ G C      EA+ L   M++ G QP+ VT+  I++ +CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            D A  LL  M    +  +   Y  +ID  C       A+ LF  M   G   +V++YN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I+  C      +A  L  +M+   + P VVT+N L     +  ++  A +L+ EM   +
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  DT TYN+ IDG CK   + +A  +F  +       N+++ N LI G
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGG 229



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 8/176 (4%)

Query: 105 PPVSSFNILF-GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P V ++N +  GC +  K  D    L + +  + + PD+ T + LIN F K G++S    
Sbjct: 113 PNVLTYNCMIDGCCSYGKWTDAE-QLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEE 171

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L     P+ +T+ SLI G C  SR+ +A  +F         P+V T NTLI G C
Sbjct: 172 LYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCC 231

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           R       + L  EM       G+V  P++V+YNT+I G C+ G ++ A++LF +M
Sbjct: 232 RAKRVDDGIKLLHEML----RRGLV--PDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%)

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ KG +  VV +NTL  GL    +V  A  L D M  N    +  TY   ++G+CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              AL L R + +S  + ++V Y  +ID L
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRL 90


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 208/447 (46%), Gaps = 75/447 (16%)

Query: 132 RLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           R  S  + P   T++ILI+C C +G ++  F  LG+I+++    NA++FT +++ LCAE 
Sbjct: 3   RAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEK 62

Query: 192 RIMEAAALFTKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           R  +A  +  +      C PDVF+Y  L+ GLC       A++L   MA    E G  C 
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMA----EDGDHCP 118

Query: 251 PNTVTY-----------------------------------NTIIDGLCKEGFVDKAKEL 275
           PN V+Y                                   N+IIDGLCK   +DKA+E+
Sbjct: 119 PNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEV 178

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +M D++I PD  TY S++ G+  +    EA R+  +M   G  P+ VT+S+++D LCK
Sbjct: 179 LRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCK 238

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC----------LTD------------- 372
            G   +A  +L  MI    NPN  TY  L+ GY           L D             
Sbjct: 239 FGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHI 298

Query: 373 ------------KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
                       ++D A   F  M   G M D++SY T+I+  CK   ++ A+S + +M+
Sbjct: 299 FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMI 358

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G+ P +V +  L  G     + E+A +LF EM    +      +   ID L K G V 
Sbjct: 359 DDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVT 418

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           EA  LF  +  +  + N+VSYN +I G
Sbjct: 419 EAKTLFDLMPIASVKPNVVSYNAIIHG 445



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 203/410 (49%), Gaps = 16/410 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF--PDIYTHSILINCFCKMGRVSHGF 162
           P V S+ +L   L   K  +  + L   +   G    P++ +++ +I+ F K   V   +
Sbjct: 82  PDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAY 141

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA----ALFTKHRVFACEPDVFTYNTL 218
            +   +L     P+ VT  S+I GLC    + +A      +F KH +    PD  TYN+L
Sbjct: 142 TLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM----PDCTTYNSL 197

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++G   +G    A+ + ++M+  +G+      PN VTY+ +ID LCK G   +A+E+   
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSR-HGQ-----PPNGVTYSMLIDCLCKFGGHTEAREILNS 251

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M     NP+V TY  ++ G+    D  E   L   M+  GV+PD   F++ +    K G+
Sbjct: 252 MIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGR 311

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D+A      M  +G+ P+  +Y T+IDG C   ++D A   F  M  +G   D+V +  
Sbjct: 312 LDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTN 371

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LI+ +      E+A  L+ EM+ +GI+PTVV + T+   LF+  +V  A  LFD M    
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIAS 431

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V  +  +YN  I G   +G + E L+L   +     + N V++N L+D +
Sbjct: 432 VKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDM 481



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 23/242 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+  F+ M R     P + S+  +   L K    D  +S F ++   GL PDI   + 
Sbjct: 313 DEAMLTFNKM-RQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTN 371

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F   G+      +   ++     P  V FT++I  L  E ++ EA  LF    + +
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIAS 431

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+V +YN +I+G    G     L L ++M        V  KPN VT+NT++D +   G
Sbjct: 432 VKPNVVSYNAIIHGYFLAGKLDEVLKLLDDM------LSVGLKPNAVTFNTLLDDMLSMG 485

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
                           + PDV T  ++I   C      +   LF EM+ +  + D VT +
Sbjct: 486 ----------------LKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTEN 529

Query: 328 VI 329
           +I
Sbjct: 530 II 531


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 210/418 (50%), Gaps = 22/418 (5%)

Query: 101 HPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP   P  SS N L   L   K  D     F+      + PDIYT + +I+  C++G++ 
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI--MEAAALFTKHRVFA-CEPDVFTYN 216
               V   I      P+  T+ SLI G C +     M    +  K  V A   P   T+ 
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG 268

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LING C+  +T  A+ +FEEM     + G+    + VTYN++I GLC EG V++  +L 
Sbjct: 269 VLINGYCKNSNTAAAVRVFEEMK----QQGIAA--SVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 277 LKMKDENINPDVVTYTSVIRGFCY------ANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            +M+D  ++P+ +T+  V++GFC       ANDW +       M ++ V+PDVV +++++
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDG------MTERNVEPDVVIYNILI 376

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D   + GKM+ A  + E M  +G++PN  TYN LI G+  +     A  L   M+  G  
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            DVV+YN LI   C   +V +A+ L  EM   G++P  +TYNT+  G  +   ++ A ++
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              M +    A+  TYN FI   C+ G + EA +L   + D     N ++Y  + +G+
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 185/385 (48%), Gaps = 45/385 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F   LR   SP  + +FN +   L +         + K + + GL P + T++ LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 154 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
           K G      H  ++L  ++ +  +P AVTF  LI G C  S    A  +F + +      
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
            V TYN+LI+GLC  G     + L EEM     + G+   PN +T+  ++ G CK+G + 
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMA 351

Query: 271 KAKELFLKMKDENINPDVV-----------------------------------TYTSVI 295
            A +    M + N+ PDVV                                   TY  +I
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GF  + DW  A  L  EM ++G++ DVVT++V++  LC  G++ KA +LL+ M   G+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           PN  TYNT+I G+C    I  A ++   ME      +VV+YN  I ++C+   ++EA  L
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDL 531

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFE 440
            +EML K + P  +TY T+  G+ E
Sbjct: 532 LNEMLDKCLVPNGITYETIKEGMME 556



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 7/195 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ + + M +   SP  V+++N L    +++  + +   L   +   G+  D+ T+++L
Sbjct: 387 DAMAVKEAMAKKGISPN-VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   C  G V     +L  +      PN +T+ ++I+G C +  I  A  + T+      
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             +V TYN  I   C+ G    A +L  EM +          PN +TY TI +G+ ++G+
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK------CLVPNGITYETIKEGMMEKGY 559

Query: 269 VDKAKELFLKMKDEN 283
               +   +    EN
Sbjct: 560 TPDIRGCTVSQASEN 574


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA   F YM++     P + + N +     K    +    L+  +    +   +YT +I
Sbjct: 174 DEAFKCF-YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNI 232

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G++      +G +    F PN V++ ++I G  +   I  A  +    RV  
Sbjct: 233 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD +TY +LI+G+C+ G    A  LF++M     E G+V  PN VTYNT+IDG C +G
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVTYNTLIDGYCNKG 346

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A     +M  + I P V TY  ++          EA  +  EM  +G+ PD +T++
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++   + G   KA  L   M+ +G+ P   TY +LI      +++  A  LF  +   
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV+ +N +++ +C N +VE A  L  EM  K + P  VT+NTL  G     +VE A
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L DEM+R  +  D  +YN  I G  + G + +A  +   +    +   +++YN LI
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 203/413 (49%), Gaps = 30/413 (7%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  ++  M R+  S   V +FNI+   L K             +   G  P++ +++ +I
Sbjct: 211 AWVLYAEMFRLRISST-VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTII 269

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +   G +     +L  +      P++ T+ SLI G+C E R+ EA+ LF K       
Sbjct: 270 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 329

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGN---------------------GEFGVV 248
           P+  TYNTLI+G C  G    A +  +EM                         GE   +
Sbjct: 330 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 389

Query: 249 CK--------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
            K        P+ +TYN +I+G  + G   KA +L  +M  + I P  VTYTS+I     
Sbjct: 390 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
            N   EA  LF +++DQGV PDV+ F+ ++D  C NG +++A  LL+ M  + V P+  T
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           +NTL+ G C   K++ AR L   M+  G   D +SYNTLI+ Y +  D+++A  +  EML
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           S G  PT++TYN L   L +  + + A +L  EM    ++ D  TY + I+G+
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L     + +  D     F  +   G+ P I T + +++ F K+ R+   +V+   + 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R   +    TF  ++  LC E ++ +A            +P+V +YNT+I+G    G+  
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  + + M     E      P++ TY ++I G+CKEG +++A  LF KM +  + P+ V
Sbjct: 280 GARRILDAMRVKGIE------PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I G+C   D   A     EM+ +G+ P V T+++++  L   G+M +A  +++ M
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ P+  TYN LI+GY        A  L   M S G     V+Y +LI    +   +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           +EA  L+ ++L +G+ P V+ +N +  G      VERA  L  EM R  V  D  T+N  
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C+ G V EA  L   ++    + + +SYN LI G
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 35/186 (18%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           ++  ++ L+   C   + D A K F  M+  G +  + + N +++ + K   +E A  LY
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 417 SEM------------------------LSK-----------GIKPTVVTYNTLFLGLFEI 441
           +EM                        L K           G KP VV+YNT+  G    
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             +E A ++ D MR   +  D+YTY + I G+CK G + EA  LF  + +     N V+Y
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 502 NCLIDG 507
           N LIDG
Sbjct: 336 NTLIDG 341


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA   F YM++     P + + N +     K    +    L+  +    +   +YT +I
Sbjct: 196 DEAFKCF-YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNI 254

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++N  CK G++      +G +    F PN V++ ++I G  +   I  A  +    RV  
Sbjct: 255 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD +TY +LI+G+C+ G    A  LF++M     E G+V  PN VTYNT+IDG C +G
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVTYNTLIDGYCNKG 368

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A     +M  + I P V TY  ++          EA  +  EM  +G+ PD +T++
Sbjct: 369 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++   + G   KA  L   M+ +G+ P   TY +LI      +++  A  LF  +   
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV+ +N +++ +C N +VE A  L  EM  K + P  VT+NTL  G     +VE A
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L DEM+R  +  D  +YN  I G  + G + +A  +   +    +   +++YN LI
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 203/413 (49%), Gaps = 30/413 (7%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  ++  M R+  S   V +FNI+   L K             +   G  P++ +++ +I
Sbjct: 233 AWVLYAEMFRLRISST-VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTII 291

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +   G +     +L  +      P++ T+ SLI G+C E R+ EA+ LF K       
Sbjct: 292 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 351

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGN---------------------GEFGVV 248
           P+  TYNTLI+G C  G    A +  +EM                         GE   +
Sbjct: 352 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 411

Query: 249 CK--------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
            K        P+ +TYN +I+G  + G   KA +L  +M  + I P  VTYTS+I     
Sbjct: 412 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
            N   EA  LF +++DQGV PDV+ F+ ++D  C NG +++A  LL+ M  + V P+  T
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           +NTL+ G C   K++ AR L   M+  G   D +SYNTLI+ Y +  D+++A  +  EML
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           S G  PT++TYN L   L +  + + A +L  EM    ++ D  TY + I+G+
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L     + +  D     F  +   G+ P I T + +++ F K+ R+   +V+   + 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R   +    TF  ++  LC E ++ +A            +P+V +YNT+I+G    G+  
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  + + M     E      P++ TY ++I G+CKEG +++A  LF KM +  + P+ V
Sbjct: 302 GARRILDAMRVKGIE------PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY ++I G+C   D   A     EM+ +G+ P V T+++++  L   G+M +A  +++ M
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             +G+ P+  TYN LI+GY        A  L   M S G     V+Y +LI    +   +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           +EA  L+ ++L +G+ P V+ +N +  G      VERA  L  EM R  V  D  T+N  
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G C+ G V EA  L   ++    + + +SYN LI G
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 35/186 (18%)

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           ++  ++ L+   C   + D A K F  M+  G +  + + N +++ + K   +E A  LY
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 417 SEM------------------------LSK-----------GIKPTVVTYNTLFLGLFEI 441
           +EM                        L K           G KP VV+YNT+  G    
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             +E A ++ D MR   +  D+YTY + I G+CK G + EA  LF  + +     N V+Y
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 502 NCLIDG 507
           N LIDG
Sbjct: 358 NTLIDG 363


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 209/405 (51%), Gaps = 6/405 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P + ++NIL               + +R+   GL PD+ T++ILI   C+MG +  
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            F +  ++L      + VT+T L+  LC   RI EA  L  +  V   +PD+ TY+ LI+
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIH 453

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G    A+ L+EEM +          PN+   + II GL ++G + +A+  F  + 
Sbjct: 454 GLCKRGAVEEAIELYEEMCSKR------IYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
             ++  +++ Y  +I G+    +  EA R + +++++G+ P +VTF+ ++   CK GK+ 
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A +LL+ +   G+ P + TY TL++GYC    +     +   ME+       ++Y  ++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
              CK   + E++ L   M ++G+ P  +TYNT+     + H +++A +L ++M ++ + 
Sbjct: 628 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 687

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
               TYN  I+GLC  G + +A  L   ++D    L  V+Y  +I
Sbjct: 688 PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 211/404 (52%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NIL   L      +  L     + + G+ PDI T++IL N F  +G +S  + V
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKV 362

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + R+L +   P+ VT+T LI G C    I E+  L  K      +  + TY  L++ LC+
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A+ L  EM        +  KP+ +TY+ +I GLCK G V++A EL+ +M  + I
Sbjct: 423 SGRIDEAVILLHEMEV------IGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRI 476

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+    +++I G       +EA+  F  +    V  +++ +++++D   K G + +A R
Sbjct: 477 YPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR 536

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + +I +G++P   T+N+LI G+C   K+  A KL  +++ +G +   V+Y TL+N YC
Sbjct: 537 SYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 596

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +  D+     +  EM +K IKPT +TY  +  GL +  ++  +++L   M    +  D  
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I   CK+  + +A +L   +     + + V+YN LI+GL
Sbjct: 657 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 207/423 (48%), Gaps = 41/423 (9%)

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
           +H D +  ++  + ++G+  + YT+ ILI+  C+  R+      L       F P+ V+F
Sbjct: 214 RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSF 273

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
            +L+ G C    +  A + F     +   PDV++YN L++GLC  G    AL    +M N
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
              E      P+ VTYN + +G    G +  A ++  +M    +NPD+VTYT +I G C 
Sbjct: 334 HGVE------PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
             +  E+ +L  +M+ QG++  +VT++V++  LCK+G++D+A  LL  M   G+ P+  T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 361 YNTLIDGYCLTDKIDHARKL-----------------------------------FVSME 385
           Y+ LI G C    ++ A +L                                   F S+ 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +    +++ YN +I+ Y K  ++ EA+  Y +++ KGI PT+VT+N+L  G  +  ++ 
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+KL D ++ + +   + TY   ++G C+ G +    ++   +     +   ++Y  ++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 506 DGL 508
            GL
Sbjct: 628 KGL 630



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++ +L   L K+   D  + L   +   GL PD+ T+S+LI+  CK G V     +  
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN+   +++I GL  +  I EA   F          ++  YN +I+G  + G
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A+  ++++     E G+   P  VT+N++I G CK+G + +A +L   +K   + P
Sbjct: 530 NIGEAVRSYKQII----EKGI--SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 583

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             VTYT+++ G+C   D +    +  EM  + ++P  +T++V++  LCK G++ ++ +LL
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  RG+ P+  TYNT+I  +C    +  A +L   M  +      V+YN LIN  C  
Sbjct: 644 KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVY 703

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++++A  L   +  + I+ T V Y T+         V+ AL  F +M           Y
Sbjct: 704 GNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDY 763

Query: 467 NNFIDGLCKSGFVLEA 482
           +  I+ LCK   + +A
Sbjct: 764 SAVINRLCKRNLITDA 779



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 166/325 (51%), Gaps = 14/325 (4%)

Query: 188 CAESR---IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNG 243
           CA SR   + +A  +  K +V   +  + TYN+L+  L    HT +  +++ E+ A+G  
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASG-- 230

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
                   N  T   +IDGLC++  +  A     +   E   P VV++ +++ GFC    
Sbjct: 231 -----VPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            + AK  F  M+  G+ PDV ++++++  LC  G M++A      M   GV P+  TYN 
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L +G+ +   I  A K+   M  NG   D+V+Y  LI  +C+  ++EE+  L  +MLS+G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           +K ++VTY  L   L +  +++ A+ L  EM    +  D  TY+  I GLCK G V EA+
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
           EL+  +   +   N    + +I GL
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGL 490



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 6/318 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +NI+    AK  +    +  +K++   G+ P I T + LI  FCK G+++    +L  I 
Sbjct: 518 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P +VT+T+L+ G C E  +     +  +    A +P   TY  ++ GLC+ G   
Sbjct: 578 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLH 637

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            ++ L + M    G F     P+ +TYNT+I   CK   + KA +L  +M   ++ P  V
Sbjct: 638 ESVQLLKYMY-ARGLF-----PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 691

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  +I G C   +  +A RL + + DQ ++   V ++ I+   C  G +  A      M
Sbjct: 692 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 751

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + RG   +   Y+ +I+  C  + I  A+  F  M ++G   D      ++N + ++ D 
Sbjct: 752 VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDP 811

Query: 410 EEALSLYSEMLSKGIKPT 427
                +++ M+  G+ P 
Sbjct: 812 NSVFEIFAMMIKCGLLPV 829


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 10/379 (2%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF  +   G   + Y+++ILI   C+   V    V+   + R   +PN   FT LI GLC
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R+ +A  LF         P V TYN +I G  + G    AL + +E+   NG     
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG----- 353

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+  TYNT+I GLC +   ++A+EL      E   P VVT+T++I G+C A  +++A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           R+  +MM    + D+  F  +++ L K  ++ +A  LL  +   G+ PN  TY ++IDGY
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C + K+D A ++   ME +GC  +  +YN+L+    K+K + +A++L ++M   GI P V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TY TL  G  + H  + A +LF+ M +N +  D + Y    D LCK+G    A E +  
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSF 589

Query: 489 IRDSKYELNIVSYNCLIDG 507
           I      L  V Y  LIDG
Sbjct: 590 IVRKGVALTKVYYTTLIDG 608



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 224/470 (47%), Gaps = 56/470 (11%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           CKS   GD  L+        FD M + +   P V ++N +    +K    +  L + + +
Sbjct: 299 CKSGRVGDARLL--------FDAMPQ-NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC----- 188
              G  PD +T++ LI   C   +      +L   ++  FTP  VTFT+LI G C     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 189 ------------------------------AESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                                          + R+ EA  L  +       P+V TY ++
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I+G C++G   +AL + + M          C+PN  TYN+++ GL K+  + KA  L  K
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDG------CQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNG 337
           M+ + I P+V+TYT++++G C  +D++ A RLF EMM+Q G++PD   ++V+ D LCK G
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           + ++A      ++ +GV      Y TLIDG+      D A  L   M   GC  D  +Y+
Sbjct: 582 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            L++  CK K + EAL +  +M  +GIK T+  Y  L   +    + + A ++++EM  +
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                  TY  FI+  CK G + +A +L   +       ++V+YN LIDG
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 179/370 (48%), Gaps = 9/370 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F  L   L K         L   +++ GL P++ T++ +I+ +CK G+V     VL  + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R    PNA T+ SL+ GL  + ++ +A AL TK +     P+V TY TL+ G C      
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  LFE M   NG      KP+   Y  + D LCK G  ++A    ++   + +    V
Sbjct: 550 NAFRLFE-MMEQNG-----LKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKV 600

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            YT++I GF  A + + A  L   M+D+G  PD  T+SV++  LCK  ++++A  +L+ M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             RG+    + Y  LID      K DHA++++  M S+G      +Y   IN YCK   +
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A  L  +M  +G+ P VVTYN L  G   +  ++RA      M       + +TY   
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 470 IDGLCKSGFV 479
           +  L K    
Sbjct: 781 LKHLLKGNLA 790



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 182/360 (50%), Gaps = 25/360 (6%)

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF------AC 208
           MGRV    V  G        P+ VT+ ++IK  C E        L T HR F        
Sbjct: 167 MGRVYSQLVQDG------LLPDTVTYNTMIKSYCKE------GDLTTAHRCFRLLLEGGL 214

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           EP+ FT N L+ G CRTG    A  LF  M        + C+ N  +Y  +I GLC+   
Sbjct: 215 EPETFTCNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYTILIQGLCEAKC 268

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A  LFL MK +  +P+V  +T +I G C +    +A+ LF  M   GV P V+T++ 
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++    K G+M+ A ++ ELM   G +P+ +TYNTLI G C   K + A +L  +    G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               VV++  LIN YC  +  ++AL + ++M+S   K  +  +  L   L +  +++ A 
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L +E+  N +  +  TY + IDG CKSG V  ALE+ + +     + N  +YN L+ GL
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 196/445 (44%), Gaps = 45/445 (10%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R+  SP     +N     LA+    + +  ++ +L   GL PD  T++ +I  +CK G +
Sbjct: 143 RLALSP---KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDL 199

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           +        +L     P   T  +L+ G C    + +A  LF    +  C+ + ++Y  L
Sbjct: 200 TTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTIL 259

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I GLC       AL LF  M          C PN   +  +I GLCK G V  A+ LF  
Sbjct: 260 IQGLCEAKCVREALVLFLMMKRDG------CSPNVRAFTFLISGLCKSGRVGDARLLFDA 313

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M    + P V+TY ++I G+      N+A ++   M   G  PD  T++ ++  LC + K
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQK 372

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID----------------------- 375
            ++A  LL   +  G  P   T+  LI+GYC+ +K D                       
Sbjct: 373 TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432

Query: 376 ------------HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
                        A++L   + +NG + +V++Y ++I+ YCK+  V+ AL +   M   G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P   TYN+L  GL +  ++ +A+ L  +M+++ +  +  TY   + G C       A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  +  +  + +  +Y  L D L
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDAL 577



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 184/423 (43%), Gaps = 54/423 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV--SHGF 162
           P V ++  L         +D    LF+ +   GL PD + +++L +  CK GR   ++ F
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 163 VV------------------------------LGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +V                              + R++    TP++ T++ L+  LC + R
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA  +  +  +   +  +F Y  LI+ + R G    A  ++ EM +         KP+
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPS 703

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
             TY   I+  CKEG ++ A++L LKM+ E + PDVVTY  +I G  +    + A     
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNG----------------KMDKASRLLELMIWRGVNP 356
            M+    +P+  T+ +++  L K                  ++D   +LLE M+  G+NP
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
              TY++LI G+C   +++ A  L   M   G   +   Y  LI   C  K  E+ALS  
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           S M   G +P + +Y  L +GL      E+   LF ++       D   +    DGL K+
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 943

Query: 477 GFV 479
           G+V
Sbjct: 944 GYV 946



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 15/326 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL I D M  +      + ++ IL   + +   +D    ++  + S+G  P   T+++
Sbjct: 651 NEALPILDQM-SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            IN +CK GR+     ++ ++ R    P+ VT+  LI G      I  A +   +    +
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 769

Query: 208 CEPDVFTYNTLINGL-------CRTGHTIVALNLFE-----EMANGNGEFGVVCKPNTVT 255
           CEP+ +TY  L+  L        R+  T    NL E     ++     + G+   P   T
Sbjct: 770 CEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL--NPTVTT 827

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+++I G CK G +++A  L   M  + ++P+   YT +I+  C    + +A      M 
Sbjct: 828 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS 887

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G QP + ++ +++  LC  G  +K   L   ++  G N +   +  L DG      +D
Sbjct: 888 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 947

Query: 376 HARKLFVSMESNGCMHDVVSYNTLIN 401
              ++   ME   C     +Y  + N
Sbjct: 948 ICFQMLSIMEKRYCCISSQTYALVTN 973


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 225/430 (52%), Gaps = 20/430 (4%)

Query: 89  EALCIFDYM---------LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           +ALC+F+ +         +  H   P    +  L   L++       L L + +   G  
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCM 285

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+ T + +I+  CK+ ++     ++ R+L   F P+ +T+  L+ GLC   ++ EA  +
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNT 258
             K     C P+    NTLING   +G    A +   E M N    FG   +P+  TYN 
Sbjct: 346 LIK---IPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMIN----FGF--QPDIFTYNI 395

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++ GLCKEG +  A++L  +M      P+V+TY  ++ G C A    EA  +  EM  +G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +  + V ++ ++  LC+  K+  A  LL  M  +G  P+ +TYN+LI G C  D+ID A 
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LF +M  +G + + V+YNTLI+   +    ++AL+L ++ML +G     +TYN L    
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++  +E+ L+L+++M  + + ADT + N  I+GLCK G V  A E  R   +  +  +I
Sbjct: 576 CKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDI 635

Query: 499 VSYNCLIDGL 508
           V+YN +++GL
Sbjct: 636 VTYNSVLNGL 645



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 225/456 (49%), Gaps = 51/456 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +EAL + + M  M    P V +FN ++ G    NK +D    L  R+   G +PD  T+ 
Sbjct: 270 SEALKLLEEMFVMG-CMPDVQTFNDVIHGLCKVNKIHDAT-KLVDRMLLRGFYPDNMTYG 327

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV- 205
            L++  C++G+++    +L +I   C  PN     +LI G     ++ EA +   +  + 
Sbjct: 328 FLLHGLCRIGKLNEARKILIKI--PC--PNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F  +PD+FTYN L++GLC+ G    A +L  EM+         C+PN +TY  +++GLCK
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCK 437

Query: 266 EGFVDKA----------------------------KE-------LFLKMKDENINPDVVT 290
            G +++A                            KE       L  +M  +   PD+ T
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S+I G C  +  +EA RLF  M+  G   + VT++ ++  L + G   KA  L+  M+
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
           +RG   +  TYN LI  +C    I+   +L+  M  +G   D +S N +IN  CK   V+
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            A     + +++G  P +VTYN++  GL ++ +++ AL LFD ++   V  D +TYN FI
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 471 DGLCKSGFVLEA-LELFRAIRDSKYELNIVSYNCLI 505
              CK G V +A L  +R I +     N+ ++N L+
Sbjct: 678 SWQCKEGMVNDACLFFYRGIENGFVPSNL-TWNVLV 712



 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 227/461 (49%), Gaps = 23/461 (4%)

Query: 51  KLKESLRLTVKD-----RASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPP 105
           KL + L + +K+     R S+   + +    +GQ       P +A+ +   M  ++   P
Sbjct: 129 KLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQ-------PGQAIRLLLDMRAVYLCEP 181

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
              S++++   L          ++F  + S G+ P ++T  I++   C    V     +L
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
             + +    PN++ + +LI  L  ++++ EA  L  +  V  C PDV T+N +I+GLC+ 
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                A  L + M    G +     P+ +TY  ++ GLC+ G +++A+++ +K+      
Sbjct: 302 NKIHDATKLVDRMLL-RGFY-----PDNMTYGFLLHGLCRIGKLNEARKILIKIP----C 351

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           P+     ++I G+  +    EA+    E M++ G QPD+ T++++M  LCK G +  A  
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  M  RG  PN  TY  L++G C    ++ A  +   M + G   + V YN LI   C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           + + V  AL+L SEM +KG KP + TYN+L  GL ++ +++ A +LF  M  +   A+  
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TYN  I  L + G   +AL L   +      L+ ++YN LI
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLI 572



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 172/353 (48%), Gaps = 12/353 (3%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PDI+T++IL++  CK G +S    ++  + R    PN +T+  L+ GLC    + EA
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +  +        +   YN LI  LCR     VALNL  EM          CKP+  TY
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG------CKPDLFTY 498

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N++I GLCK   +D+A  LF  M  +    + VTY ++I        + +A  L  +M+ 
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G   D +T++ ++   CK G ++K   L E MI  G+  +T + N +I+G C   K+D+
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A +      + G + D+V+YN+++N  CK   ++EAL+L+  +  +G++P   TYNT   
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG------FVLEAL 483
              +   V  A   F     N       T+N  +  L K        FVL+ L
Sbjct: 679 WQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 136/328 (41%), Gaps = 39/328 (11%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y   IN L   G   +   L  +M     E G+V + +   +  I+    K G   +A 
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMK----EEGIVFRESI--FMIIMKHYGKAGQPGQAI 167

Query: 274 ELFLKMKDENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            L L M+   +  P   +Y  V+      N    A  +F +M+ +GV P V TF ++M  
Sbjct: 168 RLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKA 227

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC   ++D A  LL  M   G  PN+  Y TLI      +++  A KL   M   GCM D
Sbjct: 228 LCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD 287

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF- 451
           V ++N +I+  CK   + +A  L   ML +G  P  +TY  L  GL  I ++  A K+  
Sbjct: 288 VQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347

Query: 452 -------------------------------DEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                                          + M       D +TYN  + GLCK G + 
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            A +L   +     E N+++Y  L++GL
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGL 435



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 50/116 (43%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S NI+   L K    D      +   + G  PDI T++ ++N  CK+GR+     +  R+
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                 P+A T+ + I   C E  + +A   F +       P   T+N L+  L +
Sbjct: 662 QVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 44/87 (50%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L K       L+LF RL   G+ PD +T++  I+  CK G V+   + 
Sbjct: 633 PDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLF 692

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAES 191
             R + + F P+ +T+  L+  L  +S
Sbjct: 693 FYRGIENGFVPSNLTWNVLVYTLLKQS 719


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 225/430 (52%), Gaps = 20/430 (4%)

Query: 89  EALCIFDYM---------LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           +ALC+F+ +         +  H   P    +  L   L++       L L + +   G  
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCM 285

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+ T + +I+  CK+ ++     ++ R+L   F P+ +T+  L+ GLC   ++ EA  +
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNT 258
             K     C P+    NTLING   +G    A +   E M N    FG   +P+  TYN 
Sbjct: 346 LIK---IPC-PNNAILNTLINGYVMSGQLKEAQSFLNETMIN----FGF--QPDIFTYNI 395

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++ GLCKEG +  A++L  +M      P+V+TY  ++ G C A    EA  +  EM  +G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +  + V ++ ++  LC+  K+  A  LL  M  +G  P+ +TYN+LI G C  D+ID A 
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LF +M  +G + + V+YNTLI+   +    ++AL+L ++ML +G     +TYN L    
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++  +E+ L+L+++M  + + ADT + N  I+GLCK G V  A E  R   +  +  +I
Sbjct: 576 CKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDI 635

Query: 499 VSYNCLIDGL 508
           V+YN +++GL
Sbjct: 636 VTYNSVLNGL 645



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 224/456 (49%), Gaps = 51/456 (11%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           +EAL + + M  M    P V +FN ++ G    NK +D    L  R+   G +PD  T+ 
Sbjct: 270 SEALKLLEEMFVMG-CMPDVQTFNDVIHGLCKVNKIHDAT-KLVDRMLLRGFYPDNMTYG 327

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV- 205
            L++  C++G+++    +L +I   C  PN     +LI G     ++ EA +   +  + 
Sbjct: 328 FLLHGLCRIGKLNEARKILIKI--PC--PNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F  +PD+FTYN L++GLC+ G    A +L  EM+         C+PN +TY  +++GLCK
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCK 437

Query: 266 EGFVDKA----------------------------KE-------LFLKMKDENINPDVVT 290
            G +++A                            KE       L  +M  +   PD+ T
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S+I G C  +  +EA RLF  M+  G   + VT++ ++  L + G   KA  L+  M+
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
           +RG   +  TYN LI  +C    I+   +L+  M  +G   D +S N +IN  CK   V+
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            A     + +++G  P +VTYN++  GL ++ +++ AL LFD ++   V  D +TYN FI
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 471 DGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLI 505
              CK G V +A   F R I +     N+ ++N L+
Sbjct: 678 SWQCKEGMVNDACSFFYRGIENGFVPSNL-TWNVLV 712



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 227/461 (49%), Gaps = 23/461 (4%)

Query: 51  KLKESLRLTVKD-----RASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPP 105
           KL + L + +K+     R S+   + +    +GQ       P +A+ +   M  ++   P
Sbjct: 129 KLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQ-------PGQAIRLLLDMRAVYLCEP 181

Query: 106 PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
              S++++   L          ++F  + S G+ P ++T  I++   C    V     +L
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
             + +    PN++ + +LI  L  ++++ EA  L  +  V  C PDV T+N +I+GLC+ 
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                A  L + M    G +     P+ +TY  ++ GLC+ G +++A+++ +K+      
Sbjct: 302 NKIHDATKLVDRMLL-RGFY-----PDNMTYGFLLHGLCRIGKLNEARKILIKIP----C 351

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           P+     ++I G+  +    EA+    E M++ G QPD+ T++++M  LCK G +  A  
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  M  RG  PN  TY  L++G C    ++ A  +   M + G   + V YN LI   C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           + + V  AL+L SEM +KG KP + TYN+L  GL ++ +++ A +LF  M  +   A+  
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TYN  I  L + G   +AL L   +      L+ ++YN LI
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLI 572



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 172/353 (48%), Gaps = 12/353 (3%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  PDI+T++IL++  CK G +S    ++  + R    PN +T+  L+ GLC    + EA
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +  +        +   YN LI  LCR     VALNL  EM          CKP+  TY
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG------CKPDLFTY 498

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N++I GLCK   +D+A  LF  M  +    + VTY ++I        + +A  L  +M+ 
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G   D +T++ ++   CK G ++K   L E MI  G+  +T + N +I+G C   K+D+
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A +      + G + D+V+YN+++N  CK   ++EAL+L+  +  +G++P   TYNT   
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG------FVLEAL 483
              +   V  A   F     N       T+N  +  L K        FVL+ L
Sbjct: 679 WQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 136/328 (41%), Gaps = 39/328 (11%)

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y   IN L   G   +   L  +M     E G+V + +   +  I+    K G   +A 
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMK----EEGIVFRESI--FMIIMKHYGKAGQPGQAI 167

Query: 274 ELFLKMKDENI-NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            L L M+   +  P   +Y  V+      N    A  +F +M+ +GV P V TF ++M  
Sbjct: 168 RLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKA 227

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC   ++D A  LL  M   G  PN+  Y TLI      +++  A KL   M   GCM D
Sbjct: 228 LCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD 287

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF- 451
           V ++N +I+  CK   + +A  L   ML +G  P  +TY  L  GL  I ++  A K+  
Sbjct: 288 VQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347

Query: 452 -------------------------------DEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                                          + M       D +TYN  + GLCK G + 
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            A +L   +     E N+++Y  L++GL
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGL 435



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 51/116 (43%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S NI+   L K    D      +   + G  PDI T++ ++N  CK+GR+     +  R+
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                 P+A T+ + I   C E  + +A + F +       P   T+N L+  L +
Sbjct: 662 QVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N +   L K       L+LF RL   G+ PD +T++  I+  CK G V+     
Sbjct: 633 PDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSF 692

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAES 191
             R + + F P+ +T+  L+  L  +S
Sbjct: 693 FYRGIENGFVPSNLTWNVLVYTLLKQS 719


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 209/420 (49%), Gaps = 45/420 (10%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   L K +     L L   + + G    + T++ LI+  CK G +     +L ++ 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   PN VT+T+LI GLC   R  +A     +     CEPD+ TYN+LI+GLC      
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  + +E+   +G       P+ VTYNT I GLCK G +DK  E+  +M    I+PDVV
Sbjct: 133 DAGLVLQELMIESGRI-----PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T+ S+I G C AN  ++A ++F  M+++G  PD +T+S+++D L +  ++D    +LE M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 350 I----------------------------W-------RGVNPNTYTYNTLIDGYCLTDKI 374
           +                            W        G     YT+N  I   C + K 
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNT 433
             A+ + + M  +G + +++SYN +I+  CK+ +V++A  L  +ML  G  KP V+ +NT
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNT 367

Query: 434 LFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFIDGLCKSGFVLEA---LELFRAI 489
           L  G  +  ++ +A +L  EM+ +N    D  TYN  IDG  K G + +A   LE  +A+
Sbjct: 368 LISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAV 427



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 170/337 (50%), Gaps = 7/337 (2%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F  +A  + +LI GLC   +   A  L         +  V TY TLI+GLC++G    A 
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L ++MA+        C PN VTY  +IDGLCK      A +   +M      PD+VTY 
Sbjct: 66  ALLQKMADAG------CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYN 119

Query: 293 SVIRGFCYANDWNEAKRLFIEMM-DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           S+I G C AN  ++A  +  E+M + G  PDVVT++  +  LCK GK+DK   +LE M  
Sbjct: 120 SLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR 179

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G++P+  T+ ++I G C  ++ID A ++F  M   GC+ D ++Y+ +++   +   ++ 
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
              +   M+  G      TY  L   L     +E A   +++        + YT+N FI 
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            LC+SG    A  +   + +S    N++SYN +IDGL
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGL 336



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 175/354 (49%), Gaps = 9/354 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K +     +   KR+  +G  PD+ T++ LI+  C   R+    +V
Sbjct: 78  PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 137

Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L  ++  S   P+ VT+ + I GLC   ++ +   +  +       PDV T+ ++I+GLC
Sbjct: 138 LQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLC 197

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +      A  +F+ M     E G  C P+++TY+ ++D L +   +D  +E+   M    
Sbjct: 198 KANRIDDAFQVFKGML----ERG--CVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
                 TY  +I     A D   A   + + M+ G   +V T +  +  LC++GK   A 
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINW 402
            +L  MI  G  PN  +YN +IDG C +  +D A KL   M  +GC   DV+ +NTLI+ 
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 403 YCKNKDVEEALSLYSEMLSKGI-KPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +CK   + +A  L  EM +K I  P VVTYNT+  G  +   +++A  L +EM+
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 175/339 (51%), Gaps = 8/339 (2%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++A+     MLR    P  V+  +++ G    N+  D  L L + +  +G  PD+ T++
Sbjct: 96  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYN 155

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
             I+  CK G++  G  +L  + R   +P+ VTF S+I GLC  +RI +A  +F      
Sbjct: 156 TFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 215

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PD  TY+ +++ L R         + E M   +G + +     + TY  +I  L + 
Sbjct: 216 GCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVK-SGHYAL-----SATYAPLIHALIRA 269

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++ A   + +  +     +V T+ + I   C +  +  AK + + M++ G  P+++++
Sbjct: 270 GDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY 329

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           + ++D LCK+G +D A +L   M+  G   P+   +NTLI G+C   ++  A++L   M+
Sbjct: 330 NFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMK 389

Query: 386 S-NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           + N C+ DVV+YNT+I+   K   +++A  L  EM + G
Sbjct: 390 AKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 1/231 (0%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M   +   D   Y ++I G C A     A  L   M   G    VVT++ ++D LCK+G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D A  LL+ M   G  PN  TY  LIDG C   +   A +    M  +GC  D+V+YN+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 399 LINWYCKNKDVEEA-LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           LI+  C    +++A L L   M+  G  P VVTYNT   GL +  ++++ L++ +EM R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++ D  T+ + I GLCK+  + +A ++F+ + +     + ++Y+ ++D L
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL 231


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 214/435 (49%), Gaps = 38/435 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++NIL   L KN   D    L   ++S G  PD  +++ LI+  CK+G+V      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--- 235

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R L   FTP+   + +LI G+C E    EA  L  +      +P+V +Y T+IN L  
Sbjct: 236 --RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 225 TGHTIVALNLFEEM-ANG------------NGEF------------------GVVCKPNT 253
            G+  ++L +  +M A G             G F                  GVV  PN 
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV--PNV 351

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V YN ++ GLC +  +  A  +F +M+     P+V TY+++I G+  A D + A  ++  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  G  P+VV ++ ++D LC+N   ++A  L+E M      PNT T+NT I G C + +
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A K+F  M ++GC  +  +YN L++   K++   EA  L  +M  +GI+  +VTYNT
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G      +  AL+L  +M       D  T N  ID  CK G V  A++L   +   K
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 494 YELNIVSYNCLIDGL 508
           +  +I++Y  LI G+
Sbjct: 592 WHPDIIAYTSLISGI 606



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 208/422 (49%), Gaps = 12/422 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           +  +AL  F Y ++     P V  +N +   L     +  +  ++  +   G+ P+++T+
Sbjct: 126 SSEQALKTF-YRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +IL+   CK  RV     +L  +      P+ V++T+LI  LC   ++ EA  L      
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----A 239

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
            +  P V  YN LING+C+      A  L +EM N          PN ++Y TII+ L  
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKG------IDPNVISYTTIINALSD 293

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G V+ +  +  KM     +P++ T+TS+I+GF      +EA   +  M+ +GV P+VV 
Sbjct: 294 AGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVA 353

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ +M  LC    +  A  +   M   G  PN  TY+ LIDGY     +D A +++  M 
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           ++GC  +VV+Y  +++  C+N    +A  L   M  +   P  VT+NT   GL    +V+
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A+K+FD+M  +    +T TYN  +D L K     EA  L + +     ELN+V+YN +I
Sbjct: 474 WAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTII 533

Query: 506 DG 507
            G
Sbjct: 534 YG 535



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 194/405 (47%), Gaps = 8/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   + K   ++    L   + + G+ P++ +++ +IN     G V     V
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++     +PN  TFTSLIKG   +    EA   + +       P+V  YN L++GLC 
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363

Query: 225 TGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                 A+++F +M  NG       C PN  TY+ +IDG  K G +D A E++  M    
Sbjct: 364 KRSLGDAVSVFNQMEING-------CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +P+VV YT ++   C  + +N+A  L   M  +   P+ VTF+  +  LC +G++D A 
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++ + M   G  PNT TYN L+D      +   A  L   ME  G   ++V+YNT+I  Y
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    + EAL L  +M+ +G KP  +T N +     +  +V  A++L D +       D 
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             Y + I G+C    V EA+   R +       N+ ++N L+  L
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 196/410 (47%), Gaps = 7/410 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T  EA  + D M+      P V S+  +   L+   + +  L++  ++ + G  P+++T 
Sbjct: 261 TFEEAFQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           + LI  F   G          R++R    PN V + +L+ GLC++  + +A ++F +  +
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             C P+V TY+ LI+G  + G    A  ++  M          C PN V Y  ++D LC+
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG------CHPNVVAYTCMVDVLCR 433

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
               ++A  L   M+ EN  P+ VT+ + I+G C +   + A ++F +M + G  P+  T
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++D L K+ +  +A  L++ M  RG+  N  TYNT+I GYC    +  A +L   M 
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   D ++ N +I+ YCK   V  A+ L   + +    P ++ Y +L  G+     VE
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVE 613

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            A+     M    ++ +  T+N  +  L  +     A++   A+  S +E
Sbjct: 614 EAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 141/310 (45%), Gaps = 37/310 (11%)

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           +AL  F+ +AN         K   +TY  +I+ L  E  +D  + L  +MK E I+    
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            + SVI  +  A    +A + F  M D  V+P V  ++ I+D L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS-------------- 395
              G+ PN +TYN L+   C  +++D A KL V M S GC  D VS              
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 396 ----------------YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
                           YN LIN  CK    EEA  L  EM++KGI P V++Y T+   L 
Sbjct: 233 KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNI 498
           +   VE +L +  +M     + + +T+ + I G    G   EAL+ + R IR+     N+
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP-NV 351

Query: 499 VSYNCLIDGL 508
           V+YN L+ GL
Sbjct: 352 VAYNALMHGL 361


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 223/451 (49%), Gaps = 31/451 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ I+DY++ ++ S P V + N L   L K++       ++  +   G   D Y+  I
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210

Query: 148 LINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           L+   C  G+V  G  ++ GR  + C  PN V + ++I G C    I  A  +F + ++ 
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------ 248
              P + T+ T+ING C+ G  + +  L  E+        V                   
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329

Query: 249 -----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                      CKP+  TYN +I+ LCKEG  + A     +   + + P+ ++Y  +I+ 
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C + +++ A +L ++M ++G +PD+VT+ +++  L  +G MD A  +   +I RGV+P+
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
              YN L+ G C T +   A+ LF  M     + D   Y TLI+ + ++ D +EA  ++S
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             + KG+K  VV +N +  G      ++ AL   + M   H+  D +TY+  IDG  K  
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  A+++FR +  +K + N+V+Y  LI+G 
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 165/349 (47%), Gaps = 21/349 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ IL   L  + H D  +++  +L   G+ PD   +++L++  CK GR     ++
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+A  + +LI G        EA  +F+       + DV  +N +I G CR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    AL     M   N E  V   P+  TY+TIIDG  K+  +  A ++F  M+    
Sbjct: 533 SGMLDEALACMNRM---NEEHLV---PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK-MDKAS 343
            P+VVTYTS+I GFC   D+  A+  F EM  + + P+VVT++ ++  L K    ++KA 
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLT---------DKIDHAR-----KLFVSMESNGC 389
              ELM+     PN  T+N L+ G+            D  +H +     + F  M+S+G 
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
                +YN+ +   C +  V+ A     +M+ KG  P  V++  +  G 
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 174/384 (45%), Gaps = 21/384 (5%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L     K+K YD    L  ++   G  PDI T+ ILI+     G +     +  ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+A  +  L+ GLC   R + A  LF++       PD + Y TLI+G  R+G  
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  +F        E GV  K + V +N +I G C+ G +D+A     +M +E++ PD 
Sbjct: 502 DEARKVFSLSV----EKGV--KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY+++I G+    D   A ++F  M     +P+VVT++ +++  C  G    A    + 
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615

Query: 349 MIWRGVNPNTYTYNTLIDGYCL-TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK-- 405
           M  R + PN  TY TLI      +  ++ A   +  M +N C+ + V++N L+  + K  
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675

Query: 406 -NKDVEE-------ALSLYSE----MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
             K + E         SL+SE    M S G       YN+  + L     V+ A    D+
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDK 735

Query: 454 MRRNHVAADTYTYNNFIDGLCKSG 477
           M +   + D  ++   + G C  G
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVG 759



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 148/370 (40%), Gaps = 58/370 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  + +N+L   L K   +     LF  +    + PD Y ++ LI+ F + G       V
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +      + V   ++IKG C    + EA A   +       PD FTY+T+I+G  +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F  M          CKPN VTY ++I+G C +G    A+E F +M+  ++
Sbjct: 568 QQDMATAIKIFRYMEKNK------CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVTFSVIMDE----------- 332
            P+VVTYT++IR     +   E    + E MM     P+ VTF+ ++             
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681

Query: 333 --------------------------------------LCKNGKMDKASRLLELMIWRGV 354
                                                 LC +G +  A    + M+ +G 
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKL-FVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           +P+  ++  ++ G+C+       R + F ++   G +   V Y+ ++  +     + EA 
Sbjct: 742 SPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKG-LEVAVRYSQVLEQHLPQPVICEAS 800

Query: 414 SLYSEMLSKG 423
           ++   M+ K 
Sbjct: 801 TILHAMVEKA 810



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 121/242 (50%), Gaps = 5/242 (2%)

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDVVTF 326
           ++ +++   +++EN+       + V+  +  +   ++A  ++   +E+ D    PDV+  
Sbjct: 116 NEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIAC 173

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  L K+ ++  A ++ + M  RG + + Y+   L+ G C   K++  RKL      
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC+ ++V YNT+I  YCK  D+E A  ++ E+  KG  PT+ T+ T+  G  +      
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           + +L  E++   +    +  NN ID   + G+ ++  E    I  +  + ++ +YN LI+
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353

Query: 507 GL 508
            L
Sbjct: 354 RL 355


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 211/424 (49%), Gaps = 14/424 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+  ++ ML  H   P +   N+L   L +    D  +++F+ +  +   P + T +I
Sbjct: 20  GEAVECYNQMLERH-CVPNLRDINLLLASLCQAGKMDQAMAIFRGIQCS---PSVITLNI 75

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LIN FC++  +     +   + ++    P A T+T++IK  C   R+ +A  L  +    
Sbjct: 76  LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESS-- 133

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C  DV    ++  G C+      A  L  +M           KP+ V +N II G CK 
Sbjct: 134 CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKA 188

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF--IEMMDQGVQPDVV 324
           G V +A E+   +      P+ VTYT++I GFC + + +EA +LF  +   D   +P+VV
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF+ ++  LCK  +++ A  L++ M  R +  +T+TY TL+DG C   +     ++F  M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              GC   VV+Y TL++ +CK   +++A  +   M++KGI P V TY  L  GLFE  +V
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A + F+++ R         Y+  + G CK+  V EA++ +  + D +   +  +   L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 505 IDGL 508
           ++ L
Sbjct: 429 VEML 432



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 200/409 (48%), Gaps = 24/409 (5%)

Query: 81  DINLITP--------NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR 132
           DINL+          ++A+ IF    R     P V + NIL     + +  D  L LF  
Sbjct: 40  DINLLLASLCQAGKMDQAMAIF----RGIQCSPSVITLNILINGFCELQLLDKALELFHE 95

Query: 133 LNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           +     L P+  T++ +I C+CKM R+     +L     SC + + +  TS+ +G C   
Sbjct: 96  MEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQ 153

Query: 192 RIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           R+ EA  L        + +PD+  +N +I+G C+ G    A  + E + +        C 
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG------CV 207

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELF--LKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           PN VTY T+IDG CK G + +A +LF  L  +D +  P+VVT+ ++I G C A+    A 
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M  + ++ D  T++ +MD LCK G+  + SR+ E M+  G NP+  TY TL+  +
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    +  A+++  SM + G   DV +Y  L+    +N  V  A   + ++L +   P  
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCA 387

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           V Y+ L  G  +   V+ A+K + EM    +A D  T    ++ LCK G
Sbjct: 388 VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 190/372 (51%), Gaps = 13/372 (3%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+ +T S+LI   CK GR+        ++L     PN      L+  LC   ++ +A A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F   R   C P V T N LING C       AL LF EM      F +V  P   TY  I
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN---FALV--PEATTYTAI 112

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QG 318
           I   CK   +D+A++L    +    + DV+  TSV RGFC A   +EA +L ++M++ + 
Sbjct: 113 IKCYCKMDRLDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +PD+V ++VI+   CK G++ +A  +LE ++  G  PN  TY TLIDG+C +  +  A 
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 379 KLF--VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           +LF  +S   +    +VV++N LI+  CK   +E A  L  +M ++ ++    TY TL  
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  +     ++F+EM R        TY   +   CK+G + +A ++ R++       
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP 350

Query: 497 NIVSYNCLIDGL 508
           ++ +Y  L++GL
Sbjct: 351 DVTTYTVLLEGL 362



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 10/291 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +   M+    + P + ++N++     K         + + L S G  P+  T++ 
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215

Query: 148 LINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           LI+ FCK G +S    +  ++L S      PN VTF +LI GLC   R+  A  L  + +
Sbjct: 216 LIDGFCKSGNLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                 D FTY TL++GLC+ G T     +FEEM          C P+ VTY T++   C
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG------CNPSVVTYTTLVHAHC 328

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G +  A+++   M  + I PDV TYT ++ G         A   F +++ +   P  V
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAV 388

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +S ++   CK   +D+A +    M+ R + P+  T   L++  C   + D
Sbjct: 389 VYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 208/420 (49%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F + LR     P   S  +L   L K K +   +++F  +  +   P  + +  
Sbjct: 499 SEAADLF-FALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I    K+  V  G  +  R+     +P    +  LI GLC   ++ +A  LF +     
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + TYNTLI+G C+ G+   +  + E M   N E      P+ +T+NT++ GL K G
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIE------PSLITFNTLLKGLFKAG 671

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+ A+ +  +MKD+   PD  T++ +  G+   +  + A  ++   +D G++ +  T S
Sbjct: 672 MVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCS 731

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++++ LCK G+++KA  +L   + +G+ PN   YNT+IDGY     +  AR    +ME  
Sbjct: 732 ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++YN LI  +C+  D+E A    ++M  KG+ P+V TYN L  G    ++ ++ 
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 851

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L  EM  N    +  +Y   I+ LCK   +LEA  + R + D     N+  YN LIDG
Sbjct: 852 FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 210/429 (48%), Gaps = 7/429 (1%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           Q  + L    + L +F+ M     SP  V  +N+L   L K +       LF  + +  L
Sbjct: 560 QAAVKLSDVGKGLELFNRMKHDRISPT-VFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P + T++ LI+ +CK G     F V  R+      P+ +TF +L+KGL     + +A  
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           + T+ +     PD FT++ L +G         AL ++E   +         K N  T + 
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSG------LKMNAYTCSI 732

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +++ LCKEG ++KA+E+  +   + + P+ V Y ++I G+    D   A+     M  QG
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++PD + ++ ++   C+ G M+ A + +  M  +GV+P+  TYN LI GY    + D   
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L   ME NG M +VVSY TLIN  CK   + EA  +  +M  +G+ P V  YN L  G 
Sbjct: 853 DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
               ++E A +  +EM +  +  +  TYN  IDGL  +G + EA ++   I     + ++
Sbjct: 913 CSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDV 972

Query: 499 VSYNCLIDG 507
            +YN LI G
Sbjct: 973 FTYNSLISG 981



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 181/376 (48%), Gaps = 6/376 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + +FN L   L K    +   ++   +   G  PD +T SIL + +    +      V
Sbjct: 655  PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGV 714

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                + S    NA T + L+  LC E +I +A  +  +       P+   YNT+I+G  R
Sbjct: 715  YETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSR 774

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G  + A    + M           KP+ + YN +I   C+ G ++ A++   KMK + +
Sbjct: 775  KGDLVGARMKIDAMEKQG------MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            +P V TY  +I G+    ++++   L  EM D G  P+VV++  +++ LCK  K+ +A  
Sbjct: 829  SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +   M  RGV+PN   YN LIDG C   KI+ A +    M   G   ++V+YNTLI+   
Sbjct: 889  VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             N  + EA  +  E+  KG+KP V TYN+L  G      V+R + L++EM+ + +     
Sbjct: 949  MNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLK 1008

Query: 465  TYNNFIDGLCKSGFVL 480
            TY+  I    K G  L
Sbjct: 1009 TYHLLISLCTKEGIEL 1024



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 210/470 (44%), Gaps = 72/470 (15%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   +F+ILF   + N   D  L +++    +GL  + YT SIL+N  CK G++     +
Sbjct: 690  PDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI 749

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRI---------MEAAALFTKHRVFAC------- 208
            LGR +     PN V + ++I G   +  +         ME   +   H  + C       
Sbjct: 750  LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809

Query: 209  -------------------EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                P V TYN LI G  R        +L +EM + NG      
Sbjct: 810  LGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMED-NGTM---- 864

Query: 250  KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             PN V+Y T+I+ LCK   + +A+ +   M+D  ++P+V  Y  +I G C      +A R
Sbjct: 865  -PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFR 923

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
               EM  +G++ ++VT++ ++D L  NGK+ +A  +L  +  +G+ P+ +TYN+LI GY 
Sbjct: 924  FSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYR 983

Query: 370  LTDKIDHARKLFVSMESNGC-------------------------------MHDVVSYNT 398
                +     L+  M+++G                                  D++ YN 
Sbjct: 984  FAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNG 1043

Query: 399  LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
            +++ Y  + D+++A +L  +M+ K I     TYN+L LG  ++ ++     L DEM+   
Sbjct: 1044 VLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKARE 1103

Query: 459  VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +  TY+  + G C+    + A   +R +++    L++   + L+ GL
Sbjct: 1104 MEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGL 1153



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 10/357 (2%)

Query: 98   LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
            +++    P V ++NIL G   +   +D    L K +   G  P++ ++  LINC CK  +
Sbjct: 823  MKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSK 882

Query: 158  VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
            +    +V   +     +PN   +  LI G C++ +I +A     +      E ++ TYNT
Sbjct: 883  LLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNT 942

Query: 218  LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            LI+GL   G    A ++  E++          KP+  TYN++I G    G V +   L+ 
Sbjct: 943  LIDGLSMNGKLAEAEDMLLEISRKG------LKPDVFTYNSLISGYRFAGNVQRCIALYE 996

Query: 278  KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            +MK   I P + TY  +I   C        K++F EM    +QPD++ ++ ++     +G
Sbjct: 997  EMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHG 1052

Query: 338  KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             MDKA  L + MI + +  +  TYN+LI G     K+   R L   M++     +  +Y+
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYD 1112

Query: 398  TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
             ++  +C+ KD   A   Y EM  KG+   V   + L  GL E  + + A  +  EM
Sbjct: 1113 IIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 209/432 (48%), Gaps = 43/432 (9%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L ++++++   S ++++     F +  + S L+ C+ +M +    F VL  +L+  
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F  N      L+KGLC      +A +L  + R  +  PDVF+YNT+I G C       AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM  G+G     C  + VT+  +ID  CK G +D+A     +MK   +  D+V YT
Sbjct: 198 ELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+IRGFC   + +  K LF E++++G  P  +T++ ++   CK G++ +AS + E MI R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV PN YTY  LIDG C   K   A +    M       + V+YN +IN  CK+  V +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN--HVAADTYTYNNFI 470
           + +   M  +  +P  +TYN L  GL     ++ A KL   M ++  +   D  +YN  I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 471 DGLC-----------------------------------KSGFVLEALELFRAIRDSKYE 495
            GLC                                   K+G V +A+EL++ I DSK  
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 496 LNIVSYNCLIDG 507
            N  +Y  +IDG
Sbjct: 492 RNSDTYTAMIDG 503



 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 205/405 (50%), Gaps = 10/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NIL   L +N      +SL + +    L PD+++++ +I  FC+   +     +  
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  S  + + VT+  LI   C   ++ EA     + +    E D+  Y +LI G C  G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 227 HTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                  LF+E +  G+        P  +TYNT+I G CK G + +A E+F  M +  + 
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+V TYT +I G C      EA +    M+++  +P+ VT+++I+++LCK+G +  A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWY 403
           +ELM  R   P+  TYN L+ G C    +D A KL   M  +S+    DV+SYN LI+  
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   + +AL +Y  ++ K      VT N L     +   V +A++L+ ++  + +  ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   IDG CK+G +  A  L   +R S+ + ++  YNCL+  L
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 198/400 (49%), Gaps = 8/400 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ IL     K    D  +   K +   GL  D+  ++ LI  FC  G +  G  +   +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L    +P A+T+ +LI+G C   ++ EA+ +F         P+V+TY  LI+GLC  G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL     M   + E      PN VTYN II+ LCK+G V  A E+   MK     PD 
Sbjct: 334 KEALQPLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +TY  ++ G C   D +EA +L   M+       PDV++++ ++  LCK  ++ +A  + 
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           +L++ +    +  T N L++       ++ A +L+  +  +  + +  +Y  +I+ +CK 
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +  A  L  +M    ++P+V  YN L   L +   +++A +LF+EM+R++   D  ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           N  IDG  K+G +  A  L   +  +    ++ +Y+ LI+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 197/413 (47%), Gaps = 10/413 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R +   P V S+N +     + K  +  L L   +  +G    + T  ILI+ FCK G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +      L  +       + V +TSLI+G C    +    ALF +       P   TYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI G C+ G    A  +FE M     E GV  +PN  TY  +IDGLC  G   +A +   
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMI----ERGV--RPNVYTYTGLIDGLCGVGKTKEALQPLN 341

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M +++  P+ VTY  +I   C      +A  +   M  +  +PD +T+++++  LC  G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401

Query: 338 KMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            +D+AS+LL LM+      +P+  +YN LI G C  +++  A  ++  +       D V+
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            N L+N   K  DV +A+ L+ ++    I     TY  +  G  +   +  A  L  +MR
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDG 507
            + +    + YN  +  LCK G + +A  LF  + RD+ +  ++VS+N +IDG
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMIDG 573



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 190/438 (43%), Gaps = 40/438 (9%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD +L    SP  ++ +N L     K         +F+ +   G+ P++YT++ LI+  
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C +G+       L  ++     PNAVT+  +I  LC +  + +A  +    +     PD 
Sbjct: 328 CGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE------ 266
            TYN L+ GLC  G    A  L   M   +        P+ ++YN +I GLCKE      
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443

Query: 267 -----------------------------GFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                                        G V+KA EL+ ++ D  I  +  TYT++I G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC     N AK L  +M    +QP V  ++ ++  LCK G +D+A RL E M      P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             ++N +IDG      I  A  L V M   G   D+ +Y+ LIN + K   ++EA+S + 
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           +M+  G +P     +++        + ++  +L  ++    +  D       +D +C S 
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683

Query: 478 FVLEALELFRAIRDSKYE 495
             ++  +    + D K E
Sbjct: 684 ANMDLAKRLLRVTDDKEE 701



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 139/257 (54%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N   +N ++ GLC+     KA  L  +M+  ++ PDV +Y +VIRGFC   +  +A  L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM   G    +VT+ +++D  CK GKMD+A   L+ M + G+  +   Y +LI G+C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            ++D  + LF  +   G     ++YNTLI  +CK   ++EA  ++  M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L  GL  + + + AL+  + M       +  TYN  I+ LCK G V +A+E+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 492 SKYELNIVSYNCLIDGL 508
            +   + ++YN L+ GL
Sbjct: 381 RRTRPDNITYNILLGGL 397


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 149/469 (31%), Positives = 218/469 (46%), Gaps = 34/469 (7%)

Query: 20  LRCNFSSSFPHTRK-------PTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKE 72
           L+C+  S FP+             + SENE  Y +   +LK+ L            +LK 
Sbjct: 26  LQCSSWSHFPYKDHNLLCEIFEAINDSENEKDYYSKNPRLKQIL-----------PYLKP 74

Query: 73  RCKSSGQGDINLITPNEALCIFDYMLRM--HPSPPPVSSFNILFGCLAKNK--HYDTVLS 128
           R  S      NLIT N         L    H  P PV     L   + + +    +   +
Sbjct: 75  RHVS------NLITLNPLSLSPSSFLSFFNHLFPVPVQGCENLLRRVVRLRPVELERSWA 128

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
            +  +  +G  P+ +  ++L++ FCK+G V    +V   I +    P  V+F +LI G C
Sbjct: 129 FYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCC 188

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
               + E   L          PDVFT++ LINGLC+ G       LF+EM       G+V
Sbjct: 189 KAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK----GLV 244

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             PN VT+  +IDG CK G VD A + F  M  + + PD+VTY ++I G C   D  EA+
Sbjct: 245 --PNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           RL  EM   G++PD +TF+ ++D  CK G M+ A  +   M+  G+  +   +  LI G 
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   ++  A ++   M S G   D  +Y  +++ +CK  +V     L  EM S G  P V
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           VTYN L  GL +  QV+ A  L D M    VA +  TYN  ++G  K G
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+ F +N L++G C+ G    A  +F+E+           +P  V++NT+I G CK G V
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRG------LRPTVVSFNTLISGCCKAGAV 193

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++   L   M+ E + PDV T++++I G C     +E   LF EM  +G+ P+ VTF+V+
Sbjct: 194 EEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVL 253

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK GK+D A +  ++M+ +GV P+  TYN LI+G C    +  AR+L   M ++G 
Sbjct: 254 IDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGL 313

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D +++ TLI+  CK  D+E AL +   M+ +GI+   V +  L  GL    +V  A +
Sbjct: 314 RPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAER 373

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +M       D  TY   +D  CK G V    +L + ++   +   +V+YN L++GL
Sbjct: 374 MLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGL 432



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 174/340 (51%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L S + PN   F  L+ G C    +  A  +F +       P V ++NTLI+G C+ G 
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L      G  E   VC P+  T++ +I+GLCKEG +D+   LF +M  + + P+
Sbjct: 193 VEEGFRL-----KGVMESERVC-PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPN 246

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            VT+T +I G C     + A + F  M+ QGV+PD+VT++ +++ LCK G + +A RL+ 
Sbjct: 247 GVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 306

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+  T+ TLIDG C    ++ A ++   M   G   D V++  LI+  C++ 
Sbjct: 307 EMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDG 366

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V +A  +  +MLS G KP   TY  +     +   V    KL  EM+ +       TYN
Sbjct: 367 RVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYN 426

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++GLCK G V  A  L  A+ +     N ++YN L++G
Sbjct: 427 ALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEG 466



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 134/240 (55%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++++   +L++ D    P+   +  ++ GFC       A+ +F E+  +G++P VV+F+ 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   CK G +++  RL  +M    V P+ +T++ LI+G C   ++D    LF  M   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + + V++  LI+  CK   V+ AL  +  ML++G++P +VTYN L  GL ++  ++ A 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +L +EM  + +  D  T+   IDG CK G +  ALE+ R + +   EL+ V++  LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +F +L   L ++        + + + SAG  PD  T++++++CFCK G V  GF +L  +
Sbjct: 354 AFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 P  VT+ +L+ GLC + ++  A  L          P+  TYN L+ G  + G +
Sbjct: 414 QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSS 473

Query: 229 I 229
           +
Sbjct: 474 V 474



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%)

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++E + + Y E+L  G  P    +N L  G  ++  V  A  +FDE+ +  +     ++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I G CK+G V E   L   +   +   ++ +++ LI+GL
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGL 222


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 210/424 (49%), Gaps = 10/424 (2%)

Query: 87  PNEALCIFDYM--LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           P  +L +F  +  LR+HP+     +FN+L             L+    +   GL PD  T
Sbjct: 189 PQASLDVFRSLIELRLHPN---HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVT 245

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++ L+N  C+ G +     +L R+ R    P   T+ +L+        I +A  +     
Sbjct: 246 YNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT 305

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
            +  EPD+ TYN L  GLC+ G    A  L +EM       G    P+ VTYNT++D   
Sbjct: 306 AYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER----LGTAL-PDVVTYNTLVDACF 360

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K      A  L  +M+D+ + P +VT+  V++  C      EA     ++ ++G+ PDV+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++D  CK G + KA  L++ M+ +G+  +T+T NT++   C   + + A +L  S 
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G + D VSY T++  Y K  + E AL L+ +M+ + + P++ TYNTL  GL  + ++
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A+   +E     +  D  TYN  I   CK G +  A      + ++ ++ ++V+ N L
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 505 IDGL 508
           ++GL
Sbjct: 601 MNGL 604



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 193/391 (49%), Gaps = 11/391 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSL---FKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P + ++N+L   L +    D    L    +RL +A   PD+ T++ L++   K    S  
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTA--LPDVVTYNTLVDACFKWRCSSDA 368

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +L  +      P  VT   ++K LC E ++ EA     K       PDV TYNTLI+ 
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G+   A  L +EM  G G      K +T T NT++  LCK    + A+EL      
Sbjct: 429 YCKAGNVAKAFTLMDEMV-GKG-----LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ 482

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               PD V+Y +V+  +    +   A RL+ +M+++ + P + T++ ++  LC+  ++ +
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A   L   + +G+ P+  TYN +I  YC    +++A +    M  N    DVV+ NTL+N
Sbjct: 543 AIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C +  +++AL L+   + KG K  V+TYNTL   + ++  V+ AL  FD+M    +  
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           D +TYN  +  L ++G   EA  +   + DS
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 183/407 (44%), Gaps = 42/407 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + NI+   L K    +  L   +++   GL PD+ T++ LI+ +CK G V+  F +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++      +  T  +++  LC   R  +A  L          PD  +Y T++    +
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   AL L+++M     E  ++  P+  TYNT+I GLC+   + +A +   +  ++ +
Sbjct: 502 EYNPEPALRLWDQMI----ERKLI--PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGL 555

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY  +I  +C   D   A R   +M++   +PDVVT + +M+ LC +GK+DKA +
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E  + +G   +  TYNTLI   C    +D A   F  ME  G   D  +YN +++   
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675

Query: 405 KNKDVEEALSLYSEMLSKG----------IKPT--------------------------V 428
           +    EEA ++  ++   G          +KP+                          +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            TY     GL    Q++ A  + DEM +  +  D  TY   ++GL K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 47/290 (16%)

Query: 87  PNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           P  AL ++D M+  ++ PS   +S++N L   L + +     +         GL PD  T
Sbjct: 505 PEPALRLWDQMIERKLIPS---ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++I+I+ +CK G + + F    +++ + F P+ VT  +L+ GLC   ++ +A  LF    
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
               + DV TYNTLI  +C+ G    AL+ F++M           +P+  TYN ++  L 
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG------LQPDAFTYNVVLSALS 675

Query: 265 KEGFVDKAKELFLKMKDEN----------INPD--------------------------V 288
           + G  ++A  +  K+ D            + P                           +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            TY   + G C      EAK +  EMM +G+  D  T+  +M+ L K  K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 195/428 (45%), Gaps = 43/428 (10%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L   L + +  + ++ +F+R+ S    P+  ++  L+   C+ G++      +  + R
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+  T+  +I  LC   RI  A   F        EPDV TYNTL+ GLC+ G    
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQ 119

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A +LF  M       G    P+ VTY T+ID  CK    + A  L   M     +P V +
Sbjct: 120 ACSLFGSME------GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYS 173

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y S+I G C     ++A +LF EM   G +PD VT++ ++  LC   ++ +A  LL +M+
Sbjct: 174 YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV 233

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G  P+  T+  LI+G C TD+I  A  LF  M   GC  D+V++  L++  C  + + 
Sbjct: 234 ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLR 293

Query: 411 EALS---------------------------------LYSEMLSKGIKPTVVTYNTLFLG 437
            ALS                                 L  +M  +G+ P VVTY   F G
Sbjct: 294 PALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKG 353

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  +  RA + F  M    +  D   YN  +DG CK+  +  A ++ R +  S    N
Sbjct: 354 LGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPN 413

Query: 498 IVSYNCLI 505
           IV+YN L+
Sbjct: 414 IVTYNTLV 421



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 192/411 (46%), Gaps = 78/411 (18%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N++   L K +     +  F+ +      PD+ T++ L+   CK GRV+    +
Sbjct: 68  PDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSL 123

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G +  +  TP+ VT+T+LI   C   +   A  L        C P V++Y ++INGLC+
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LFEEM          CKP+ VTYNT+I GLC +  + +AK+L   M +   
Sbjct: 184 NRKVDQAYQLFEEMKLAG------CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF 237

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC---------- 334
            PD +T+T++I G C  +   EA  LF  M  QG  PD+VT +V++ +LC          
Sbjct: 238 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALS 297

Query: 335 -----------------------KNGKMDKASRLLELMIWRGVNPN--TYT--------- 360
                                  +    D+A+RLL+ M  RGV PN  TYT         
Sbjct: 298 VVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDW 357

Query: 361 ------------------------YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
                                   YN L+DG+C  D++D A K+   M+ +G   ++V+Y
Sbjct: 358 KEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTY 417

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           NTL+  +C+   VE    L   M+S+G +P V T++TL  GLF + Q + A
Sbjct: 418 NTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 180/397 (45%), Gaps = 43/397 (10%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T + L++   +  R     VV  RI      PNA+++  L+K LC   +I +A +   + 
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 PDVFTYN +I+ LC+      A+  FE M           +P+ VTYNT++ GL
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----------EPDVVTYNTLLGGL 111

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G V +A  LF  M+   I P  VTYT++I  FC    +  A  L   M  +   P V
Sbjct: 112 CKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTV 171

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            ++  I++ LCKN K+D+A +L E M   G  P+  TYNTLI G C+  ++  A+ L   
Sbjct: 172 YSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTV 231

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT------------- 430
           M  NG   D +++  LI   C    ++EA  L+  M  +G  P +VT             
Sbjct: 232 MVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRK 291

Query: 431 --------------------YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
                               Y  +F  L      +RA +L  +M R  V  +  TY  F 
Sbjct: 292 LRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFF 351

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            GL      + A   FR + +   E ++V+YN L+DG
Sbjct: 352 KGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDG 388



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 193/437 (44%), Gaps = 43/437 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+  L   L +    D   S    +    L PD++T++++I+  CK  R+S     
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI-- 90

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                 +   P+ VT+ +L+ GLC   R+ +A +LF         P   TY TLI+  C+
Sbjct: 91  --EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 148

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L + MA+        C P   +Y +II+GLCK   VD+A +LF +MK    
Sbjct: 149 MCQFETAYGLLQLMASRK------CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY ++I G C     +EAK L   M++ G QPD +TF+ +++ LC   ++ +A  
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKI------------------------------ 374
           L + M  +G  P+  T+  L+   C+  K+                              
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRR 322

Query: 375 ---DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
              D A +L   M   G   +VV+Y          K+   A   +  ML +GI+P +V Y
Sbjct: 323 RGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAY 382

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N L  G  +  +++ A K+   M ++ +  +  TYN  +   C+ G V    EL   +  
Sbjct: 383 NVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVS 442

Query: 492 SKYELNIVSYNCLIDGL 508
              + ++ +++ L+ GL
Sbjct: 443 RGRQPDVATWSTLVAGL 459



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 160/322 (49%), Gaps = 14/322 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+  +   L KN+  D    LF+ +  AG  PD  T++ LI+  C   R+     +
Sbjct: 169 PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDL 228

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ + F P+ +TFT+LI+GLC   RI EA  LF       C PD+ T+  L++ LC 
Sbjct: 229 LTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCI 288

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++              C    + Y  I   L +    D+A  L  KM    +
Sbjct: 289 LRKLRPALSVVRNYP--------ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 340

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIE---MMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            P+VVTYT+  +G     DW E  R + E   M++QG++PD+V ++V++D  CK  ++D 
Sbjct: 341 PPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDM 397

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +++  M   G+ PN  TYNTL+  +C   K++   +L  +M S G   DV +++TL+ 
Sbjct: 398 AEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVA 457

Query: 402 WYCKNKDVEEALSLYSEMLSKG 423
                   + A S  +  +S+G
Sbjct: 458 GLFMVGQADAAYSFLNLAMSQG 479



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 156/312 (50%), Gaps = 14/312 (4%)

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFA--CEPDVFTYNTLINGLCRTGHTIVALNLF 235
           VT  +L+  L    R  +   +F   R+F+  C+P+  +Y  L+  LCRTG    A +  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVF--RRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTI 58

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            EMA           P+  TYN +ID LCK   + +A E F  M +    PDVVTY +++
Sbjct: 59  AEMAREK------LVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLL 108

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G C      +A  LF  M   G+ P  VT++ ++D  CK  + + A  LL+LM  R  +
Sbjct: 109 GGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCS 168

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P  Y+Y ++I+G C   K+D A +LF  M+  GC  D V+YNTLI+  C  + + EA  L
Sbjct: 169 PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDL 228

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
            + M+  G +P  +T+  L  GL    +++ A  LF  M +   A D  T+   +  LC 
Sbjct: 229 LTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCI 288

Query: 476 SGFVLEALELFR 487
              +  AL + R
Sbjct: 289 LRKLRPALSVVR 300



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 4/255 (1%)

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           VT N ++D L +    ++   +F ++  ++  P+ ++Y  +++  C     ++A     E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  + + PDV T++V++D LCK  ++ +A    E M      P+  TYNTL+ G C   +
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM----PEPDVVTYNTLLGGLCKNGR 116

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A  LF SME  G     V+Y TLI+ +CK    E A  L   M S+   PTV +Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL +  +V++A +LF+EM+      D  TYN  I GLC    + EA +L   + ++ 
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 494 YELNIVSYNCLIDGL 508
           ++ + +++  LI+GL
Sbjct: 237 FQPDKITFTALIEGL 251



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 1/140 (0%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++   F  L   K        F+R+   G+ PD+  +++L++ FCK  R+     
Sbjct: 341 PPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEK 400

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++  + +S   PN VT+ +L+   C + ++     L         +PDV T++TL+ GL 
Sbjct: 401 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 460

Query: 224 RTGHTIVALNLFEEMANGNG 243
             G    A + F  +A   G
Sbjct: 461 MVGQADAAYS-FLNLAMSQG 479


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 208/399 (52%), Gaps = 10/399 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +FN++   + K    D  + +F+ +      PD+YT+  L++  CK  R+     +
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256

Query: 165 LGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           L  + +  CF P+ VTF  LI GLC +  +  AA L     +  C P+  TYNTLI+GLC
Sbjct: 257 LDEMQIDGCF-PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G    A++L + M +        C PN VTY TII+GL K+G       +   M++  
Sbjct: 316 LKGKLEKAISLLDRMVSSK------CVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              +   Y+++I G        EA  LF EM  +G + + + +S ++D LC++GK D A 
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M  +G  PN YT ++L+ G+        A +++  M  +    + V Y+ LI+  
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAA 461
           CK+  V+EA+ ++++ML KG KP VV Y+++  GL     VE A++L++EM  +      
Sbjct: 490 CKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP 549

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
           D  TYN  ++ LCK   +  A++L  ++ D   + ++V+
Sbjct: 550 DVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 6/336 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +PN +TF  +IK +C    + +A  +F    +  CEPDV+TY TL++GLC+      A+
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
           +L +EM          C P+ VT+N +I+GLCK+G + +A +L   M  +   P+ VTY 
Sbjct: 255 SLLDEMQIDG------CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYN 308

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G C      +A  L   M+     P+VVT+  I++ L K G+    + +L LM  R
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G   N Y Y+TLI G     K   A  LF  M   G   + + Y+ +I+  C++   ++A
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           + + SEM +KG  P   T ++L  G FE     RA++++ +M +++   +   Y+  I G
Sbjct: 429 VEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHG 488

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G V EA+ ++  +     + ++V+Y+ +I+GL
Sbjct: 489 LCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 181/368 (49%), Gaps = 18/368 (4%)

Query: 148 LINCFCKMGRVSHGFVVLGR-------ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           LIN +  +G       VL R       I   CF    V F +  K    E    +A  LF
Sbjct: 96  LINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFI---VIFKAYGKAHLPE----KAVDLF 148

Query: 201 TKHRV-FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
            +    F C+    ++N+++N + + G    AL  +  +    G  GV   PN +T+N +
Sbjct: 149 DRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVI---GAKGVSISPNVLTFNLV 205

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I  +CK G VD A ++F  M      PDV TY +++ G C A+  +EA  L  EM   G 
Sbjct: 206 IKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGC 265

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P  VTF+V+++ LCK G + +A++L++ M  +G  PN  TYNTLI G CL  K++ A  
Sbjct: 266 FPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAIS 325

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M S+ C+ +VV+Y T+IN   K     +   + + M  +G       Y+TL  GLF
Sbjct: 326 LLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLF 385

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +  + + A+ LF EM       +T  Y+  IDGLC+ G   +A+E+   + +     N  
Sbjct: 386 KEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAY 445

Query: 500 SYNCLIDG 507
           + + L+ G
Sbjct: 446 TCSSLMKG 453



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 18/258 (6%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L ++   D  + +   + + G  P+ YT S L+  F + G       V   + +  FT N
Sbjct: 419 LCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQN 478

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V ++ LI GLC + ++ EA  ++T+     C+PDV  Y+++INGL   G    A+ L+ 
Sbjct: 479 EVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYN 538

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM       G   +P+ VTYN +++ LCK+  + +A +L   M D   +PD+VT T  +R
Sbjct: 539 EMLCQ----GPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLR 594

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                 D  +  R F++ +              +  L K  ++  AS+++E+M+ + + P
Sbjct: 595 MLREKLDPPQDGREFLDEL--------------VVRLLKRQRVLGASKIVEVMLQKLLPP 640

Query: 357 NTYTYNTLIDGYCLTDKI 374
              T+  +++  C   K+
Sbjct: 641 KHSTWARVVENLCKPKKV 658


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 192/382 (50%), Gaps = 7/382 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           ++F  +   G+ PD  ++ ++   +C+MGR+S     L  ++R  F  +  T T +I   
Sbjct: 217 NVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTF 276

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C +         F K      +P++  + +LINGLC+ G    A  + EEM         
Sbjct: 277 CEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW---- 332

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNE 306
             KPN  T+  +IDGLCK+G+ +KA  LFLK+ + ++  P+V TYTS+I G+C  +  N 
Sbjct: 333 --KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNR 390

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+ L   M +QG+ P+  T++ ++D   K G  +KA  L++LM   G + N +TYN  ID
Sbjct: 391 AEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFID 450

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
             C   +   A KL       G   D V+Y  LI+  C+  D  EAL  +S+M   G++P
Sbjct: 451 SLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQP 510

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            + TYNTL        ++E + KLF E     +     TY + I G C+   V  AL+ F
Sbjct: 511 DMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFF 570

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             + D     + ++Y  LI GL
Sbjct: 571 NRMSDHGCTPDSLTYGALISGL 592



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 184/397 (46%), Gaps = 10/397 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L K         + + +   G  P++YTH+ LI+  CK G     F +
Sbjct: 299 PNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRL 358

Query: 165 LGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             +++RS  + PN  T+TS+I G C E ++  A  L ++ +     P+  TY  LI+G  
Sbjct: 359 FLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHS 418

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+   A  L + M  G   F      N  TYN  ID LCK+G   +A +L  K     
Sbjct: 419 KAGNFEKAYELMDLM--GKEGFSA----NIFTYNAFIDSLCKKGRFLEACKLLKKGFRLG 472

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  D VTYT +I   C   D  EA   F +M   GVQPD+ T++ ++    +  +M+++ 
Sbjct: 473 LQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESE 532

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L    +  G+ P   TY ++I GYC    +  A K F  M  +GC  D ++Y  LI+  
Sbjct: 533 KLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGL 592

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   ++EA  LY  M+ KG+ P  VT  TL     +      A+ + + + +       
Sbjct: 593 CKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLW---I 649

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
            T N  I  LC    V  A+  F  + D    ++ V+
Sbjct: 650 RTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVT 686



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 16/307 (5%)

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
           H V  C   VF            G    A+N+  EM N     G+V    T+   T + G
Sbjct: 161 HEVMDCMVRVFA---------EIGKFQEAVNMVIEMEN----HGLVLTVRTLNCVTGVAG 207

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             + G V  A+ +F +M+   + PD V+Y  +   +C     ++  R   +M+ +G   D
Sbjct: 208 --EMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVD 265

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             T ++++   C+ G   +     +  +  G+ PN   + +LI+G C    I  A ++  
Sbjct: 266 NATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLE 325

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEI 441
            M   G   +V ++  LI+  CK    E+A  L+ +++ S   KP V TY ++  G  + 
Sbjct: 326 EMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKE 385

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            ++ RA  L   M+   +  +T TY   IDG  K+G   +A EL   +    +  NI +Y
Sbjct: 386 DKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTY 445

Query: 502 NCLIDGL 508
           N  ID L
Sbjct: 446 NAFIDSL 452



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 90/221 (40%), Gaps = 27/221 (12%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ IL   L +       L  F ++  AG+ PD++T++ LI  F +  R+     +    
Sbjct: 479 TYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEA 538

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     P   T+TS+I G C +  +  A   F +     C PD  TY  LI+GLC+    
Sbjct: 539 VGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKL 598

Query: 229 IVALNLFEEMANGNGEFGVV---------CKPNTV-----------------TYNTIIDG 262
             A  L+E M +       V         CK +                   T NT+I  
Sbjct: 599 DEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRK 658

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           LC E  V  A   F K+ D++ N D VT T+     CY ++
Sbjct: 659 LCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTA-CYESN 698


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 211/421 (50%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F+ M +   + P +S++NIL   L +    D    L   +  AGLFP++ T +I
Sbjct: 360 DEALRVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNI 417

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK  ++     +  ++     TP+ +TF SLI GL    R+ +A  ++ K     
Sbjct: 418 MVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD 477

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C  +   Y +LI      G       ++++M N N      C P+    NT +D + K G
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQN------CSPDLQLLNTYMDCMFKAG 531

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +K + +F ++K     PD  +Y+ +I G   A   NE   LF  M +QG   D   ++
Sbjct: 532 EPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK GK++KA +LLE M  +G  P   TY ++IDG    D++D A  LF   +S 
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +VV Y++LI+ + K   ++EA  +  E++ KG+ P V T+N+L   L +  ++  A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEA 711

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L  F  M+      +  TY   I+GLCK     +A   ++ ++    + + +SY  +I G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771

Query: 508 L 508
           L
Sbjct: 772 L 772



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 211/421 (50%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F++ L  +   P   ++N +         +D   SL +R  + G  P +  ++ 
Sbjct: 290 DEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ C  KMG+V     V   + +    PN  T+  LI  LC   ++  A  L    +   
Sbjct: 349 ILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAG 407

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +++ LC++     A  +FE+M         VC P+ +T+ ++IDGL K G
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK------VCTPDEITFCSLIDGLGKVG 461

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A +++ KM D +   + + YTS+I+ F       +  +++ +M++Q   PD+   +
Sbjct: 462 RVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLN 521

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+ +K   + E +  R   P+  +Y+ LI G       +   +LF SM+  
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YN +I+ +CK   V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E +   +  +   Y++ IDG  K G + EA  +   +       N+ ++N L+D 
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDA 701

Query: 508 L 508
           L
Sbjct: 702 L 702



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 204/440 (46%), Gaps = 30/440 (6%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P  S++  L G  +   H D +L+LF+++   G  P ++  + LI  F K GR
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     +L  +  S    + V +   I       ++  A   F +      +PD  TY +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278

Query: 218 LINGLCRTGHTIVALNLFEE---------------MANGNGEFGVVCK------------ 250
           +I  LC+      A+ +FE                M  G G  G   +            
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 251 --PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P+ + YN I+  L K G VD+A  +F +MK ++  P++ TY  +I   C A   + A 
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAF 397

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L   M   G+ P+V T ++++D LCK+ K+D+A  + E M ++   P+  T+ +LIDG 
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGL 457

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
               ++D A K++  M  + C  + + Y +LI  +  +   E+   +Y +M+++   P +
Sbjct: 458 GKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDL 517

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
              NT    +F+  + E+   +F+E++      D  +Y+  I GL K+GF  E  ELF +
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +++    L+  +YN +IDG 
Sbjct: 578 MKEQGCVLDTRAYNIVIDGF 597



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 193/418 (46%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F +  R    P    S+N L   +A+ +++D +  +   ++ AG  P + T   
Sbjct: 79  NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++    K  ++  GF V+  + +  F P    +T+LI    A +       LF + +   
Sbjct: 139 MVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP V  + TLI G  + G    AL+L +EM + +         + V YN  ID   K G
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS------LDADIVLYNVCIDSFGKVG 252

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A + F +++   + PD VTYTS+I   C AN  +EA  +F  +      P    ++
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++      GK D+A  LLE    +G  P+   YN ++       K+D A ++F  M+ +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKD 372

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               ++ +YN LI+  C+   ++ A  L   M   G+ P V T N +   L +  +++ A
Sbjct: 373 AA-PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             +F++M       D  T+ + IDGL K G V +A +++  + DS    N + Y  LI
Sbjct: 432 CAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLI 489



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 171/364 (46%), Gaps = 6/364 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           ++K + +    PD+   +  ++C  K G    G  +   I    F P+A +++ LI GL 
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                 E   LF   +   C  D   YN +I+G C+ G    A  L EEM     E    
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE---- 619

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P  VTY ++IDGL K   +D+A  LF + K + I  +VV Y+S+I GF      +EA 
Sbjct: 620 --PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  E+M +G+ P+V T++ ++D L K  ++++A    + M      PN  TY  LI+G 
Sbjct: 678 LILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K + A   +  M+  G     +SY T+I+   K  ++ EA +L+    + G  P  
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
             YN +  GL   ++   A  LF+E RR  +     T    +D L K+  + +A  +   
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAV 857

Query: 489 IRDS 492
           +R++
Sbjct: 858 LRET 861



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +EGF     ++   M+     P    YT++I  F   N  +    LF +M + G +P V 
Sbjct: 150 REGF-----DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            F+ ++    K G++D A  LL+ M    ++ +   YN  ID +    K+D A K F  +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E+NG   D V+Y ++I   CK   ++EA+ ++  +      P    YNT+ +G     + 
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A  L +  R          YN  +  L K G V EAL +F  ++      N+ +YN L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNIL 383

Query: 505 IDGL 508
           ID L
Sbjct: 384 IDML 387



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 97/218 (44%)

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +Y S++       +++   ++  EM   G  P V T   ++    K  K+ +   +++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
                 P    Y TLI  +   +  D    LF  M+  G    V  + TLI  + K   V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           + ALSL  EM S  +   +V YN       ++ +V+ A K F E+  N +  D  TY + 
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           I  LCK+  + EA+E+F  +  ++      +YN +I G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 211/424 (49%), Gaps = 14/424 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+  ++ ML  H   P +   N+L   L +    D  +++F+ +  +   P + T +I
Sbjct: 20  GEAVECYNQMLERH-CVPNLRDINLLLASLCQAGTMDQAMAIFRGIQCS---PSVITLNI 75

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LIN FC++  +     +   + ++    P A T+T++IK  C   R+ +A  L  +    
Sbjct: 76  LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESS-- 133

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C  DV    ++  G C+      A  L  +M           KP+ V +N II G CK 
Sbjct: 134 CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKA 188

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF--IEMMDQGVQPDVV 324
           G V +A E+   +      P+ VTYT++I GFC + + +EA +LF  +   D   +P+VV
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF+ ++  LCK  +++ A  L++ M  R +  +T+TY TL+DG C   +     ++F  M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              GC   VV+Y TL++ +CK   +++A  +   M++KGI P V TY  L  GLFE  +V
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A + F+++ R         Y+  + G CK+  V EA++ +  + D +   +  +   L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 505 IDGL 508
           ++ L
Sbjct: 429 VEML 432



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 201/409 (49%), Gaps = 24/409 (5%)

Query: 81  DINLI--------TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR 132
           DINL+        T ++A+ IF    R     P V + NIL     + +  D  L LF  
Sbjct: 40  DINLLLASLCQAGTMDQAMAIF----RGIQCSPSVITLNILINGFCELQLLDKALELFHE 95

Query: 133 LNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
           +     L P+  T++ +I C+CKM R+     +L     SC + + +  TS+ +G C   
Sbjct: 96  MEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQ 153

Query: 192 RIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           R+ EA  L        + +PD+  +N +I+G C+ G    A  + E + +        C 
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMG------CV 207

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELF--LKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           PN VTY T+IDG CK G + +A +LF  L  +D +  P+VVT+ ++I G C A+    A 
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  +M  + ++ D  T++ +MD LCK G+  + SR+ E M+  G NP+  TY TL+  +
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    +  A+++  SM + G   DV +Y  L+    +N  V  A   + ++L +   P  
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCA 387

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           V Y+ L  G  +   V+ A+K + EM    +A D  T    ++ LCK G
Sbjct: 388 VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 189/372 (50%), Gaps = 13/372 (3%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+ +T S+LI   CK GR+        ++L     PN      L+  LC    + +A A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F   R   C P V T N LING C       AL LF EM      F +V  P   TY  I
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN---FALV--PEATTYTAI 112

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QG 318
           I   CK   +D+A++L    +    + DV+  TSV RGFC A   +EA +L ++M++ + 
Sbjct: 113 IKCYCKMDRLDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +PD+V ++VI+   CK G++ +A  +LE ++  G  PN  TY TLIDG+C +  +  A 
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 379 KLF--VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           +LF  +S   +    +VV++N LI+  CK   +E A  L  +M ++ ++    TY TL  
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  +     ++F+EM R        TY   +   CK+G + +A ++ R++       
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP 350

Query: 497 NIVSYNCLIDGL 508
           ++ +Y  L++GL
Sbjct: 351 DVTTYTVLLEGL 362



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 10/291 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +   M+    + P + ++N++     K         + + L S G  P+  T++ 
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215

Query: 148 LINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           LI+ FCK G +S    +  ++L S      PN VTF +LI GLC   R+  A  L  + +
Sbjct: 216 LIDGFCKSGNLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                 D FTY TL++GLC+ G T     +FEEM          C P+ VTY T++   C
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG------CNPSVVTYTTLVHAHC 328

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G +  A+++   M  + I PDV TYT ++ G         A   F +++ +   P  V
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAV 388

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +S ++   CK   +D+A +    M+ R + P+  T   L++  C   + D
Sbjct: 389 VYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 199/408 (48%), Gaps = 47/408 (11%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           K    D    L   +   G+  D+  HS LI   C+ GR+         +   C +PN +
Sbjct: 11  KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC-SPNVI 69

Query: 179 TFTSLIKGLCAESRIMEAAALFTK-----HRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           T+ +++ GLC  +RI E   LF            CEPDV +Y+T+I+ LC+      A  
Sbjct: 70  TYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 129

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
            F+ M        V C PN VTY+++IDGLCK   VD+A  L +++K E++ P  + Y +
Sbjct: 130 YFKRMR------AVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183

Query: 294 VIRGF----------------------------------CYANDWNE-AKRLFIEMMDQG 318
           V+ GF                                   + ND  E A + F  ++  G
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
            +P+VVT++V +  LCK GK+D+A R+L  M+   V P+  TY+++IDG+C   ++D A 
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +F  M  + C+   V++ TL++ + ++K   EA  ++ +M++ G  P + TYN L   +
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
                VE AL+++ +M+R     D  TY   I  LC++  V EA E  
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFL 411



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 199/399 (49%), Gaps = 37/399 (9%)

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++ +IN FCK G+V   F +L  +       + +  ++LI+GLC + RI EA   F K  
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KSM 60

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+V TYNT++NGLC+       L LF++M     E    C+P+ ++Y+T+ID LC
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEK-RYEASHGCEPDVISYSTVIDALC 119

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA----------------- 307
           K   VDKA E F +M+     P+VVTY+S+I G C  +  +EA                 
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 308 ---------KR---------LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
                    KR         L + M ++G   +++ F+ ++  L KN + +KA +  E +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           +  G  PN  TYN  + G C   K+D A ++ + M  +    DV++Y+++I+ +CK   +
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A  +++ M+     P  VT+ TL  G  E  +   A ++ ++M          TYN  
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +D +C +  V  ALE++  ++  K + +  +Y  LI  L
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCL 398



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 184/383 (48%), Gaps = 11/383 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLN-----SAGLFPDIYTHSILINCFCKMGRVS 159
           P V ++N +   L K    D  L LF  +      S G  PD+ ++S +I+  CK  RV 
Sbjct: 66  PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 125

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
             +    R+      PN VT++SLI GLC   R+ EA +L  + +     P    YN ++
Sbjct: 126 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVV 185

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NG  R G     L L   M      FG+    N + +N ++  L K    +KA + F ++
Sbjct: 186 NGFKRQGKPSECLELLLHMKEKG--FGI----NIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
                 P+VVTY   + G C A   +EA R+ +EM++  V PDV+T+S I+D  CK G+M
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           DKA  +   M+     P+  T+ TL+ G+    K   A ++   M + G +  + +YN L
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           ++  C    VE AL +Y +M  K  +P   TY  L   L    +V+ A +  D M  ++V
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNV 419

Query: 460 AADTYTYNNFIDGLCKSGFVLEA 482
             +    +  ++ LCK G V EA
Sbjct: 420 VPNGAICHALVEVLCKQGEVDEA 442



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 166/347 (47%), Gaps = 25/347 (7%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  FN +   L KN   +     F+RL  +G  P++ T+++ ++  CK G+V   + +L 
Sbjct: 213 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILL 272

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++ S  TP+ +T++S+I G C   R+ +A  +FT+  V  C P   T+ TL++G     
Sbjct: 273 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 332

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +  A  + E+M N     G +  P   TYN ++D +C    V+ A E++ KMK +   P
Sbjct: 333 KSREAFRVHEDMVNA----GFI--PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP 386

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--------------- 331
           D  TY  +I+  C A   +EAK     M    V P+      +++               
Sbjct: 387 DANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVL 446

Query: 332 ----ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
               E+CK G+ D+A  ++E M+ +GV P+  TY  ++   C  D++D A   F  M S 
Sbjct: 447 DNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASR 506

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           GC   +V+Y  LI   C     ++A  ++  M++ G  P   T  TL
Sbjct: 507 GCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 14/261 (5%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M+     P PV+   +L G  +++K       + + + +AG  P + T+++L++C 
Sbjct: 305 VFTRMMVHECIPHPVTFMTLLHG-FSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C    V     +  ++ R    P+A T+  LI+ LC   R+ EA             P+ 
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 423

Query: 213 FTYNTLINGLCRTGHTIVAL----NLFEEMANGNGEFGVVC---------KPNTVTYNTI 259
              + L+  LC+ G    A     N+ E    G  +  V           +P+  TY  +
Sbjct: 424 AICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAV 483

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +  LC    VD A   F KM      P +VTYT +I   C A+  ++A R+F  M+  G 
Sbjct: 484 LRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGF 543

Query: 320 QPDVVTFSVIMDELCKNGKMD 340
            P   T   +   L   G  D
Sbjct: 544 TPQAQTMRTLSSCLRDAGYQD 564


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 190/351 (54%), Gaps = 18/351 (5%)

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS--CFTPNAV 178
           +H+D  L L      A   PD+ +++ LIN  CK+GRV   F +  +++ +  C  PNA 
Sbjct: 31  EHFDASLEL------AHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC-RPNAF 83

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           T+ +L+ GLC + R+  A A+  + R     PDV TYNTL+  L + G    AL  F +M
Sbjct: 84  TYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                E G V  P  V++N II GLC+   +  A E+F +M D + +P++VTY+ VI G 
Sbjct: 144 T----EEGYV--PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGL 197

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C ++  +EA++L   M+ +G +PD+V ++ ++      G++D A  LL  M+ +G  P+ 
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TY  +ID  C   ++D A ++F  + +N C  +VV+Y+ LI  YC+   V+E   +  E
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE 317

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           M     +P VVTYNT+  GL  + + E A  +F EM       D  TY   
Sbjct: 318 M---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 189/366 (51%), Gaps = 22/366 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSI 147
           +AL  FD  L +  + P V S+  L   L K    D    LF+++ +A G  P+ +T++ 
Sbjct: 28  QALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 87

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK  R+     V+    +  F P+ VT+ +L+  L    R+ EA A FT+     
Sbjct: 88  LVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 147

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P + ++N +I GLCR      AL +F EM + +        PN VTY+ +IDGLCK  
Sbjct: 148 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD------FHPNLVTYSVVIDGLCKSD 201

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A++L  +M  E   PD+V YT ++ GF  A   + A  L   M+ QG  PDVVT++
Sbjct: 202 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 261

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D+LCK G++D A  +   ++    +PN  TY+ LI GYC   ++D   K+   M   
Sbjct: 262 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREM 318

Query: 388 GCMHDVVSYNTLINWYCKNKDV-EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            C  +VV+YNT+I W     D  EEA  ++ EM   G  P   TY  L          +R
Sbjct: 319 ACRPNVVTYNTMI-WGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL----------KR 367

Query: 447 ALKLFD 452
           AL++ D
Sbjct: 368 ALRMID 373



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 183/334 (54%), Gaps = 9/334 (2%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNL 234
           N  T + +++GLC   R+ +A   F      A  +PDV +Y TLINGLC+ G    A +L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F +M    G     C+PN  TYN ++DGLCK+  +D A+ +  + +  +  PDVVTY ++
Sbjct: 69  FRKMVAAGG-----CRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +         +EA   F +M ++G  P +V+F+ I+  LC+  ++  A  +   MI R  
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +PN  TY+ +IDG C +D++D A++L   M S GC  D+V+Y  L+  +     ++ AL 
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L   M+S+G  P VVTY  +   L ++ +V+ A ++F E+  N  + +  TY+  I G C
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++  V E     + +R+     N+V+YN +I GL
Sbjct: 304 RASRVDEG---GKVMREMACRPNVVTYNTMIWGL 334



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 9/272 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L +    D  L+ F ++   G  P + + + +I   C+  R++    V
Sbjct: 115 PDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEV 174

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++   F PN VT++ +I GLC   ++ EA  L  +     C PD+  Y  L+ G   
Sbjct: 175 FNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 234

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL L   M +        C P+ VTY  +ID LCK G VD A E+F ++     
Sbjct: 235 AGRLDSALGLLRRMVSQG------CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 288

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+VVTY+++I G+C A+  +E  ++  EM     +P+VVT++ ++  L    + ++A  
Sbjct: 289 SPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYG 345

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +   M   G  P+  TY  L     + D   H
Sbjct: 346 MFREMSECGFVPDARTYRGLKRALRMIDHPPH 377



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 2/194 (1%)

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKID 375
           +G+Q +  T S+I+  LC+ G++ +A    +  +      P+  +Y TLI+G C   ++D
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 376 HARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            A  LF  M  + GC  +  +YN L++  CK   ++ A ++ +E   +   P VVTYNTL
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
              LF++ +V+ AL  F +M          ++N  I GLC++  + +ALE+F  + D  +
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 495 ELNIVSYNCLIDGL 508
             N+V+Y+ +IDGL
Sbjct: 184 HPNLVTYSVVIDGL 197



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 10/239 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL  F  M       P + SFN +   L + +     L +F  +      P++ T+S+
Sbjct: 134 DEALATFTQMTE-EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSV 192

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  CK  ++     +L R++     P+ V +T L+ G  A  R+  A  L  +     
Sbjct: 193 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 252

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDV TY  +I+ LC+ G    A  +F E+          C PN VTY+ +I G C+  
Sbjct: 253 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK------CSPNVVTYSALIGGYCRAS 306

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            VD+  ++   M++    P+VVTY ++I G    +   EA  +F EM + G  PD  T+
Sbjct: 307 RVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 10/379 (2%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF  +   G   + Y+++ILI   C    V    V+   + R   +PN   FT LI GLC
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R+ +A  LF         P V TYN +I G  + G    AL + +E+   NG     
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG----- 353

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+  TYNT+I GLC +   ++A+EL      E   P VVT+T++I G+C A  +++A 
Sbjct: 354 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           R+  +MM    + D+  F  +++ L K  ++ +A  LL  +   G+ PN  TY ++IDGY
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C + K+D A ++   ME +GC  +  +YN+L+    K+K + +A++L ++M   GI P V
Sbjct: 473 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 532

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TY TL  G  + H  + A +LF+ M +N +  D + Y    D LCK+G    A E +  
Sbjct: 533 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSF 589

Query: 489 IRDSKYELNIVSYNCLIDG 507
           I      L  V Y  LIDG
Sbjct: 590 IVRKGVALTKVYYTTLIDG 608



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 224/470 (47%), Gaps = 56/470 (11%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           CKS   GD  L+        FD M + +   P V ++N +    +K    +  L + + +
Sbjct: 299 CKSGRVGDARLL--------FDAMPQ-NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC----- 188
              G  PD +T++ LI   C   +      +L   ++  FTP  VTFT+LI G C     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 189 ------------------------------AESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                                          + R+ EA  L  +       P+V TY ++
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I+G C++G   +AL + + M          C+PN  TYN+++ GL K+  + KA  L  K
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDG------CQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNG 337
           M+ + I P+V+TYT++++G C  +D++ A RLF EMM+Q G++PD   ++V+ D LCK G
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           + ++A      ++ +GV      Y TLIDG+      D A  L   M   GC  D  +Y+
Sbjct: 582 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            L++  CK K + EAL +  +M  +GIK T+  Y  L   +    + + A ++++EM  +
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                  TY  FI+  CK G + +A +L   +       ++V+YN LIDG
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 179/370 (48%), Gaps = 9/370 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F  L   L K         L   +++ GL P++ T++ +I+ +CK G+V     VL  + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R    PNA T+ SL+ GL  + ++ +A AL TK +     P+V TY TL+ G C      
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  LFE M   NG      KP+   Y  + D LCK G  ++A    ++   + +    V
Sbjct: 550 NAFRLFE-MMEQNG-----LKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKV 600

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            YT++I GF  A + + A  L   M+D+G  PD  T+SV++  LCK  ++++A  +L+ M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             RG+    + Y  LID      K DHA++++  M S+G      +Y   IN YCK   +
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A  L  +M  +G+ P VVTYN L  G   +  ++RA      M       + +TY   
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780

Query: 470 IDGLCKSGFV 479
           +  L K    
Sbjct: 781 LKHLLKGNLA 790



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 179/354 (50%), Gaps = 13/354 (3%)

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
           MGRV    V  G        P+ VT+ ++IK  C E  +  A   F        EP+ FT
Sbjct: 167 MGRVYSQLVQDG------LLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFT 220

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
            N L+ G CRTG    A  LF  M        + C+ N  +Y  +I GLC    V KA  
Sbjct: 221 CNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYTILIQGLCDAKCVRKALV 274

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           LFL MK +  +P+V  +T +I G C +    +A+ LF  M   GV P V+T++ ++    
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G+M+ A ++ ELM   G +P+ +TYNTLI G C   K + A +L  +    G    VV
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 393

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           ++  LIN YC  +  ++AL + ++M+S   K  +  +  L   L +  +++ A +L +E+
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             N +  +  TY + IDG CKSG V  ALE+ + +     + N  +YN L+ GL
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 196/445 (44%), Gaps = 45/445 (10%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R+  SP     +N     LA+    + +  ++ +L   GL PD  T++ +I  +CK G +
Sbjct: 143 RLALSP---KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDL 199

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           +        +L     P   T  +L+ G C    + +A  LF    +  C+ + ++Y  L
Sbjct: 200 TTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTIL 259

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I GLC       AL LF  M          C PN   +  +I GLCK G V  A+ LF  
Sbjct: 260 IQGLCDAKCVRKALVLFLMMKRDG------CSPNVRAFTFLISGLCKSGRVGDARLLFDA 313

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M    + P V+TY ++I G+      N+A ++   M   G  PD  T++ ++  LC + K
Sbjct: 314 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQK 372

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID----------------------- 375
            ++A  LL   +  G  P   T+  LI+GYC+ +K D                       
Sbjct: 373 TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432

Query: 376 ------------HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
                        A++L   + +NG + +V++Y ++I+ YCK+  V+ AL +   M   G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P   TYN+L  GL +  ++ +A+ L  +M+++ +  +  TY   + G C       A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  +  +  + +  +Y  L D L
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDAL 577



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 184/423 (43%), Gaps = 54/423 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV--SHGF 162
           P V ++  L         +D    LF+ +   GL PD + +++L +  CK GR   ++ F
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589

Query: 163 VV------------------------------LGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +V                              + R++    TP++ T++ L+  LC + R
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA  +  +  +   +  +F Y  LI+ + R G    A  ++ EM +         KP+
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPS 703

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
             TY   I+  CKEG ++ A++L LKM+ E + PDVVTY  +I G  +    + A     
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNG----------------KMDKASRLLELMIWRGVNP 356
            M+    +P+  T+ +++  L K                  ++D   +LLE M+  G+NP
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
              TY++LI G+C   +++ A  L   M   G   +   Y  LI   C  K  E+ALS  
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           S M   G +P + +Y  L +GL      E+   LF ++       D   +    DGL K+
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 943

Query: 477 GFV 479
           G+V
Sbjct: 944 GYV 946



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 15/326 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL I D M  +      + ++ IL   + +   +D    ++  + S+G  P   T+++
Sbjct: 651 NEALPILDQM-SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            IN +CK GR+     ++ ++ R    P+ VT+  LI G      I  A +   +    +
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 769

Query: 208 CEPDVFTYNTLINGL-------CRTGHTIVALNLFE-----EMANGNGEFGVVCKPNTVT 255
           CEP+ +TY  L+  L        R+  T    NL E     ++     + G+   P   T
Sbjct: 770 CEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL--NPTVTT 827

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+++I G CK G +++A  L   M  + ++P+   YT +I+  C    + +A      M 
Sbjct: 828 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS 887

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G QP + ++ +++  LC  G  +K   L   ++  G N +   +  L DG      +D
Sbjct: 888 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 947

Query: 376 HARKLFVSMESNGCMHDVVSYNTLIN 401
              ++   ME   C     +Y  + N
Sbjct: 948 ICFQMLSIMEKRYCCISSQTYALVTN 973


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 227/474 (47%), Gaps = 21/474 (4%)

Query: 33  KPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALC 92
           K  S ++E E  Y      +K  +R T+    +    +  RCK    G         A+ 
Sbjct: 183 KDKSMVNEVEEVYSVM---IKCQIRPTI---VTFNTMMDSRCKEGEVG--------RAVE 228

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M RM    P   S+N+L   L+    +D    L ++++  GL    +T++ LI  F
Sbjct: 229 VLDVM-RMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGF 287

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK         +   +L     P  VT+ +++  LC   R+ +A             PD+
Sbjct: 288 CKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDL 347

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            +YNTLI G  R G+   AL LF E+ + N        P+ VTYNT+IDG C+ G +D A
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSKN------LVPSVVTYNTLIDGGCRTGNLDIA 401

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K +   M    + PDVVT+T ++RGFC   +   AK LF EM+ +G++PD + ++  +  
Sbjct: 402 KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
             K G   KA  + E M   G  P+  TYN LI+G C     D A +L   M   G + D
Sbjct: 462 ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPD 521

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            V+Y ++I+ +  +  + +A  ++S+ML KGI P+VVTY  L        +++ A K FD
Sbjct: 522 HVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFD 581

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           EM+   V+ +  TYN  I GLCK   +  A  LF  +       N  +Y  LI+
Sbjct: 582 EMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 8/347 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N L    ++  ++   L LF  L S  L P + T++ LI+  C+ G +     +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+ VTFT L++G C    +  A  LF +      +PD   Y T I G  +
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G+   A  + EEM A G         P+ +TYN +I+GLCK G  D A EL  KM+ E 
Sbjct: 465 LGNPSKAFGMKEEMKAEG-------FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD VTYTS+I     +    +A+ +F +M+ +G+ P VVT++V++      G++D A 
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +  + M  +GV+PN  TYN LI G C  + +D A  LF  MES G   +  +Y  LIN  
Sbjct: 578 KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINEN 637

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
              +  ++AL LY +ML + IKP   T++ L   L + +++   L+L
Sbjct: 638 SNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 198/399 (49%), Gaps = 6/399 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V   ++L    AK    +  L +F ++ + GL PD+   + ++        V+    V  
Sbjct: 137 VKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYS 196

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +++    P  VTF +++   C E  +  A  +    R+F C+P+  +YN L+NGL   G
Sbjct: 197 VMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKG 256

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L E+M+       +  K +  TYN +I G CK+   ++A +L  +M      P
Sbjct: 257 EFDRAKELIEQMSM------LGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            VVTY +++   C     ++A+R    M+++ + PD+V+++ ++    + G   +A  L 
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +  + + P+  TYNTLIDG C T  +D A+ +   M  +G   DVV++  L+  +C+ 
Sbjct: 371 SELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQM 430

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++  A  L+ EMLS+G+KP  + Y T  +G  ++    +A  + +EM+      D  TY
Sbjct: 431 GNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITY 490

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N  I+GLCK G   +A EL + +R      + V+Y  +I
Sbjct: 491 NVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 192/402 (47%), Gaps = 8/402 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N +   L      + V  ++  +    + P I T + +++  CK G V     V
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV 229

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN V++  L+ GL  +     A  L  +  +   +    TYN LI G C+
Sbjct: 230 LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCK 289

Query: 225 TGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                    +FEE  +   E  G    P  VTYNTI+  LC+ G V  A+     M +E+
Sbjct: 290 K-------EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED 342

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD+V+Y ++I G+    ++ EA  LF E+  + + P VVT++ ++D  C+ G +D A 
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAK 402

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            + + MI  G+ P+  T+  L+ G+C    +  A++LF  M S G   D ++Y T I   
Sbjct: 403 GMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGE 462

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +  +A  +  EM ++G  P ++TYN L  GL ++   + A +L  +MR   +  D 
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDH 522

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            TY + I     SG + +A E+F  +       ++V+Y  LI
Sbjct: 523 VTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 184/362 (50%), Gaps = 6/362 (1%)

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI  F K   +    +V  +++ +   P+      ++K L  +S + E   +++     
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC 201

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P + T+NT+++  C+ G    A+ + + M      FG  C PN V+YN +++GL  +
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRM----FG--CDPNDVSYNVLVNGLSGK 255

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  D+AKEL  +M    +     TY  +IRGFC    + EA  L  EM+ +G  P VVT+
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + IM  LC+ G++  A R L++M+   + P+  +YNTLI GY        A  LF  + S
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
              +  VV+YNTLI+  C+  +++ A  +  +M+  G+ P VVT+  L  G  ++  +  
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A +LFDEM    +  D   Y   I G  K G   +A  +   ++   +  ++++YN LI+
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 507 GL 508
           GL
Sbjct: 496 GL 497



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 7/253 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD ML     P  ++    + G L K  +      + + + + G  PD+ T+++LIN  
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGEL-KLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK+G       ++ ++      P+ VT+TS+I        + +A  +F+        P V
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY  LI+     G    A   F+EM +          PN +TYN +I GLCKE  +D A
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKG------VSPNVITYNALIYGLCKENMMDVA 611

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF +M+ + ++P+  TYT +I        W +A +L+ +M+D+ ++PD  T S +M  
Sbjct: 612 YNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKH 671

Query: 333 LCKNGKMDKASRL 345
           L K+ K+    RL
Sbjct: 672 LSKDYKLLAVLRL 684



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 17/200 (8%)

Query: 325 TFSVIMDELCKNGKMDKA-------------SRLLELMIWRGVNPNTYT----YNTLIDG 367
            F  I+D L KNG M  A               +L++++  G   N+       + LI  
Sbjct: 87  AFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQV 146

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +     ++    +F  M +NG + DV + N ++        V E   +YS M+   I+PT
Sbjct: 147 FAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPT 206

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +VT+NT+     +  +V RA+++ D MR      +  +YN  ++GL   G    A EL  
Sbjct: 207 IVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIE 266

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +     +++  +YN LI G
Sbjct: 267 QMSMLGLKVSAHTYNPLIRG 286


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 217/421 (51%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  IF+       +P  V+  +++ G L K    D    LF+++  AG   +   ++ 
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDG-LGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  F   GR   G  +   ++R    P+     + +  +     + +  A+F   + F 
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDV +Y+ LI+GL + G      N+F+ M+     F +    +   YN ++DGLCK G
Sbjct: 556 FLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG--FAL----DARAYNAVVDGLCKSG 609

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VDKA E+  +MK ++++P V TY S++ G    +  +EA  LF E   +G++ +V+ +S
Sbjct: 610 KVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYS 669

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K G++D+A  +LE M+ +G+ PN YT+N+L+D    T++ID A   F SM+  
Sbjct: 670 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEM 729

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            C  +  +Y+ LIN  C+ +   +A   + EM  +G+ P VVTY T+  GL ++  +  A
Sbjct: 730 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDA 789

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+  + N    D+ ++N  I+G+  +   +EA ++F   R     LN+ +   L+D 
Sbjct: 790 YSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDA 849

Query: 508 L 508
           L
Sbjct: 850 L 850



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 206/402 (51%), Gaps = 7/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  F  L   LA+    +  L+L   +  + L PDI  +++ I+CF K G V   +    
Sbjct: 211 VPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFH 270

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ V++TS++  LC   R+ EA  LF +       P  + YNT+I G     
Sbjct: 271 ELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L E +     E G  C P+ V++N+I+  L K+  VD+A  LF  MK ++  P
Sbjct: 331 RFDDAYKLLERLR----ERG--CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKP 383

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++ TY  +I   C A   NEA ++  EM   G+ P++++ ++++D LCK  ++++A R+ 
Sbjct: 384 NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF 443

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E    RG NPN+ TY +LIDG     KID A +LF  M   G   + + Y +LI  +  +
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMH 503

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              E+   +Y EM+ +G +P +   NT    +F+  +VE+   +F++M+      D  +Y
Sbjct: 504 GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSY 563

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  I GL K+G   E   +F+A+    + L+  +YN ++DGL
Sbjct: 564 SILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 195/404 (48%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N+   C  K    D     F  L + GL PD  +++ ++   CK GR+     +
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G++      P A  + ++I G  +  R  +A  L  + R   C P V ++N+++  L +
Sbjct: 304 FGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGK 363

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL LF+ M           KPN  TYN IID LC  G V++A ++  +M+   +
Sbjct: 364 KRKVDEALTLFDVMKKD-------AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++++   ++   C AN   EA R+F    ++G  P+ VT+  ++D L K GK+D A R
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M+  G + N   Y +LI  + +  + +   K++  M   G   D+   NT ++   
Sbjct: 477 LFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVF 536

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +VE+  +++ +M S G  P V +Y+ L  GL +  Q      +F  M +   A D  
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDAR 596

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  +DGLCKSG V +A E+   ++       + +Y  ++DGL
Sbjct: 597 AYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 173/348 (49%), Gaps = 6/348 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           ++K +   G  PD+   +  ++C  K G V  G  +   +    F P+  +++ LI GL 
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              +  E + +F          D   YN +++GLC++G    A  + EEM   +      
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH------ 625

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P   TY +I+DGL K   +D+A  LF + K + I  +V+ Y+S+I GF      +EA 
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  EMM +G+ P+V T++ +MD L K  ++D+A    + M     +PNTYTY+ LI+G 
Sbjct: 686 LILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K + A   +  M+  G + +VV+Y T+I+   K  ++ +A SL+    + G  P  
Sbjct: 746 CRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDS 805

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            ++N L  G+   ++   A ++F+E R      +  T  + +D L K+
Sbjct: 806 ASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKT 853



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 200/440 (45%), Gaps = 79/440 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP S++ +L G LA+ +  +  L L +++   G     Y  S+ +               
Sbjct: 174 PPFSAYTVLIGALAEARQPERALELLRQMQDVG-----YEVSVPL--------------- 213

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                          FT+L++ L  E ++  A AL  + +    EPD+  YN  I+   +
Sbjct: 214 ---------------FTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGK 258

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G   +A   F E+ A+G        +P+ V+Y +++  LCK G + +A+ELF +M+ E 
Sbjct: 259 AGSVDMAWKFFHELKAHG-------LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAER 311

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P    Y ++I G+  A  +++A +L   + ++G  P VV+F+ I+  L K  K+D+A 
Sbjct: 312 DVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 371

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L ++M  +   PN  TYN +ID  C+  +++ A K+   ME  G   +++S N +++  
Sbjct: 372 TLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD----------- 452
           CK   +EEA  ++     +G  P  VTY +L  GL +  +++ A +LF+           
Sbjct: 431 CKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490

Query: 453 ------------------------EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
                                   EM R     D    N ++D + K+G V +   +F  
Sbjct: 491 IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFED 550

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           ++   +  ++ SY+ LI GL
Sbjct: 551 MKSFGFLPDVRSYSILIHGL 570



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 166/356 (46%), Gaps = 13/356 (3%)

Query: 158 VSHGFVVLGRILRSCF-----TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           +SH    L ++L          PN     +L+  L    R+ +A  +    R     P  
Sbjct: 118 LSHDLAALEKVLEEMSHLGYGLPNPAC-AALVATLVRSRRLEDAFRVIGAMRHLKFRPPF 176

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y  LI  L        AL L  +M +   E  V        + T++  L +EG ++ A
Sbjct: 177 SAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPL------FTTLVRALAREGQMEPA 230

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L  ++K   + PD+V Y   I  F  A   + A + F E+   G++PD V+++ ++  
Sbjct: 231 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWV 290

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G++ +A  L   M      P  Y YNT+I GY   ++ D A KL   +   GC+  
Sbjct: 291 LCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPS 350

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VVS+N+++    K + V+EAL+L+ +++ K  KP + TYN +   L    +V  A K+ D
Sbjct: 351 VVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRD 409

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM    +  +  + N  +D LCK+  + EA  +F +  +     N V+Y  LIDGL
Sbjct: 410 EMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGL 465



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 7/355 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I+  M+R     P ++  N    C+ K    +   ++F+ + S G  PD+ ++SILI+  
Sbjct: 512 IYKEMIR-RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G+      +   + +  F  +A  + +++ GLC   ++ +A  +  + +V    P V
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY ++++GL +      A  LFEE  +   E       N + Y+++IDG  K G +D+A
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIEL------NVILYSSLIDGFGKVGRIDEA 684

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +  +M  + + P+V T+ S++       + +EA   F  M +    P+  T+S++++ 
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILING 744

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC+  K +KA    + M  +G+ PN  TY T+I G      I  A  LF   ++NG + D
Sbjct: 745 LCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPD 804

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             S+N LI          EA  ++ E   +G +  V T  +L   L +   +E+A
Sbjct: 805 SASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 6/239 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+++  +   LAK    D    LF+   S G+  ++  +S LI+ F K+GR+   +++
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +++   TPN  T+ SL+  L     I EA   F   +   C P+ +TY+ LINGLCR
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A   ++EM       G++  PN VTY T+I GL K G +  A  LF + K    
Sbjct: 748 VQKYNKAFVFWQEMQKQ----GLI--PNVVTYTTMISGLAKVGNITDAYSLFERFKTNGG 801

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            PD  ++ ++I G   AN   EA ++F E   +G + +V T   ++D L K   +++A+
Sbjct: 802 IPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAA 860


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 33/444 (7%)

Query: 97  MLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           M +M  S   P + ++N +     K   +   + L   + S G+  D+ T+++LI+  C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
             R++ G+++L  + +    PN VT+ +LI G   E +++ A+ L  +   F   P+  T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 215 YNTLINGLCRTGHTIVALNLFEEM-ANG-----------------NGEFGV--------- 247
           +N LI+G    G+   AL +F  M A G                 N EF +         
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 248 ---VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
              VC    +TY  +IDGLCK GF+D+A  L  +M  + I+PD+VTY+++I GFC    +
Sbjct: 396 RNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             AK +   +   G+ P+ + +S ++   C+ G + +A R+ E MI  G   + +T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +   C   K+  A +    M S+G + + VS++ LIN Y  + +  +A S++ EM   G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            PT  TY +L  GL +   +  A K    +     A DT  YN  +  +CKSG + +A+ 
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF  +       +  +Y  LI GL
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGL 658



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++L IF  M  ++   P V + N + G + K+    +V S  K +    + PD+ T +I
Sbjct: 140 QDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  G       ++ ++ +S + P  VT+ +++   C + R   A  L    +   
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + DV TYN LI+ LCR+        L  +M         +  PN VTYNT+I+G   EG
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR------MIHPNEVTYNTLINGFSNEG 312

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A +L  +M    ++P+ VT+ ++I G     ++ EA ++F  M  +G+ P  V++ 
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCKN + D A      M   GV     TY  +IDG C    +D A  L   M  +
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+V+Y+ LIN +CK    + A  +   +   G+ P  + Y+TL      +  ++ A
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++++ M       D +T+N  +  LCK+G V EA E  R +       N VS++CLI+G
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 207/457 (45%), Gaps = 31/457 (6%)

Query: 83  NLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           +++   E + ++ ++  M      P V++FNIL   L     ++    L +++  +G  P
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 226

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
            I T++ +++ +CK GR      +L  +       +  T+  LI  LC  +RI +   L 
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 286

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN------------------GN 242
              R     P+  TYNTLING    G  ++A  L  EM +                    
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346

Query: 243 GEFGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           G F    K           P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T +I G C     +EA  L  EM   G+ PD+VT+S +++  CK G+   A  ++  +  
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G++PN   Y+TLI   C    +  A +++ +M   G   D  ++N L+   CK   V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A      M S GI P  V+++ L  G     +  +A  +FDEM +       +TY + + 
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G + EA +  +++      ++ V YN L+  +
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 7/352 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+ S  F  L    R C   N   +  LI+    E  I ++  +F    ++   P V+T 
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N ++  + ++G  +   +  +EM         +C P+  T+N +I+ LC EG  +K+  L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             KM+     P +VTY +V+  +C    +  A  L   M  +GV  DV T+++++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + ++ K   LL  M  R ++PN  TYNTLI+G+    K+  A +L   M S G   + V+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +N LI+ +    + +EAL ++  M +KG+ P+ V+Y  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           RN V     TY   IDGLCK+GF+ EA+ L   +     + +IV+Y+ LI+G
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 189/421 (44%), Gaps = 10/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +F YM+      P   S+ +L   L KN  +D     + R+   G+     T++ +
Sbjct: 351 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G +    V+L  + +    P+ VT+++LI G C   R   A  +  +      
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P+   Y+TLI   CR G    A+ ++E M   G+         +  T+N ++  LCK G
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFNVLVTSLCKAG 522

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+E    M  + I P+ V++  +I G+  + +  +A  +F EM   G  P   T+ 
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK G + +A + L+ +       +T  YNTL+   C +  +  A  LF  M   
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVER 446
             + D  +Y +LI+  C+      A+    E  ++G + P  V Y     G+F+  Q + 
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +   ++M       D  T N  IDG  + G + +  +L   + +     N+ +YN L+ 
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 507 G 507
           G
Sbjct: 763 G 763



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 45/457 (9%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            +A  +FD M ++   P   +  ++L G L K  H        K L++     D   ++ L
Sbjct: 561  KAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            +   CK G ++    + G +++    P++ T+TSLI GLC + + +  A LF K      
Sbjct: 620  LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV-IAILFAKEAEARG 678

Query: 209  E--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               P+   Y   ++G+ + G     +   E+M N      +   P+ VT N +IDG  + 
Sbjct: 679  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRM 732

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            G ++K  +L  +M ++N  P++ TY  ++ G+    D + +  L+  ++  G+ PD +T 
Sbjct: 733  GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA-------RK 379
              ++  +C++  ++   ++L+  I RGV  + YT+N LI   C   +I+ A         
Sbjct: 793  HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852

Query: 380  LFVSMESNGC-------------------MHDVV---------SYNTLINWYCKNKDVEE 411
            L +S++ + C                   +H++           Y  LIN  C+  D++ 
Sbjct: 853  LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912

Query: 412  ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            A  +  EM++  I P  V  + +   L +  + + A  L   M +  +     ++   + 
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972

Query: 472  GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              CK+G V+EALEL   + +   +L++VSYN LI GL
Sbjct: 973  LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 18/317 (5%)

Query: 209 EPDVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 251
           +P + T + ++  +C T H +V       A ++ +E++  +G+    FG +      C  
Sbjct: 63  QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 121

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N   Y+ +I    +EG +  + E+F  M     NP V T  +++     + +        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM+ + + PDV TF+++++ LC  G  +K+S L++ M   G  P   TYNT++  YC  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            +   A +L   M+S G   DV +YN LI+  C++  + +   L  +M  + I P  VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G     +V  A +L +EM    ++ +  T+N  IDG    G   EAL++F  +  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 492 SKYELNIVSYNCLIDGL 508
                + VSY  L+DGL
Sbjct: 362 KGLTPSEVSYGVLLDGL 378



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 180/451 (39%), Gaps = 79/451 (17%)

Query: 96   YMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            ++  +H  P  V +  +N L   + K+ +    +SLF  +    + PD YT++ LI+  C
Sbjct: 600  FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659

Query: 154  KMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G+     +       R    PN V +T  + G+    +         +       PD+
Sbjct: 660  RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             T N +I+G  R G      +L  EM N NG       PN  TYN ++ G  K   V  +
Sbjct: 720  VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG------GPNLTTYNILLHGYSKRKDVSTS 773

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
              L+  +    I PD +T  S++ G C +N      ++    + +GV+ D  TF++++ +
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 333  LCKNGKMDKASRLLELMIW-----------------------------------RGVNPN 357
             C NG+++ A  L+++M                                     +G++P 
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 358  TYTYNTLIDGYCLTDKI-----------------------------------DHARKLFV 382
            +  Y  LI+G C    I                                   D A  L  
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 383  SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             M     +  + S+ TL++  CKN +V EAL L   M + G+K  +V+YN L  GL    
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 443  QVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             +  A +L++EM+ +   A+  TY   I GL
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 87   PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
             +EA  +  +ML+M    P ++SF  L     KN +    L L   +++ GL  D+ +++
Sbjct: 945  ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            +LI   C  G ++  F +   +    F  NA T+ +LI+GL A       A +  K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/305 (38%), Positives = 167/305 (54%), Gaps = 9/305 (2%)

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGL 263
           ++  EP++ TYN+LI+G C T      L L EEM A G       C P+  TYNT+IDGL
Sbjct: 3   IWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATG-------CLPDINTYNTLIDGL 55

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G V +   LF +MK +  NPDV+TY+ +I GFC  +  N A  LF +M+ Q   PDV
Sbjct: 56  CKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDV 115

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VTF  +++  C  G +D A RLLE ++    +P+ YTY +L+DG+C   ++  A ++   
Sbjct: 116 VTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKR 175

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M    C  +VV Y  LI+ +C       A  L  EM+  G++P  +TY +L  G      
Sbjct: 176 MAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGD 235

Query: 444 VERALKLFDEMRRN-HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +E A K+ + + RN +  AD + Y   +DGLC++G +  ALEL  AI+ S        Y 
Sbjct: 236 LEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 295

Query: 503 CLIDG 507
            LI G
Sbjct: 296 ALIRG 300



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 7/311 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++ T++ LI+ FC    V    +++  +  +   P+  T+ +LI GLC   R+ E 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             LF + +   C PDV TY+ LI G C+     +A  LF++M            P+ VT+
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDM------LKQAALPDVVTF 118

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            T+++G C  G VD A+ L  ++   + +PDV TYTS++ GFC      EA R+   M  
Sbjct: 119 PTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAK 178

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
              QP+VV ++ ++D  C  GK   A +LLE M+  GV PN  TY +LI G+C T  ++ 
Sbjct: 179 GECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEE 238

Query: 377 ARKLFVSMESN-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           A K+   +E N  C  D+ +Y  +++  C+   +  AL L   +   G  P    Y  L 
Sbjct: 239 AHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 298

Query: 436 LGLFEIHQVER 446
            G   + +  R
Sbjct: 299 RGEMTLSRKGR 309



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L          D+ L L + + + G  PDI T++ LI+  CK GRV     +
Sbjct: 8   PNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNRL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G +      P+ +T++ LI G C   RI  A  LF      A  PDV T+ TL+ G C 
Sbjct: 68  FGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCN 127

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L EE+   +      C P+  TY +++DG CK   + +A  +  +M     
Sbjct: 128 AGLVDDAERLLEEIVASD------CSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGEC 181

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV YT++I  FC A     A +L  EM+  GVQP+ +T+  ++   C  G +++A +
Sbjct: 182 QPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHK 241

Query: 345 LLE-LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC--MHDVVSYNTLIN 401
           +LE L        + + Y  ++DG C T ++  A +L  +++ +G    HD+  Y  LI 
Sbjct: 242 MLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI--YVALIR 299

Query: 402 WYCKNKDVEEALSLYSEM-LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
                           EM LS+  +P    Y  +   L    + E+A  L DE+  N  +
Sbjct: 300 ---------------GEMTLSRKGRPNAKVYEAVIQELAREGRHEKANALSDELLGNKAS 344

Query: 461 ADTYTYNN 468
              +   N
Sbjct: 345 KTRFVITN 352



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 1/160 (0%)

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           + IW G+ PN  TYN+LI G+C+T+ +D    L   M + GC+ D+ +YNTLI+  CK  
Sbjct: 1   MTIW-GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTG 59

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V E   L+ EM +K   P V+TY+ L  G  ++ ++  A  LFD+M +     D  T+ 
Sbjct: 60  RVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFP 119

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++G C +G V +A  L   I  S    ++ +Y  L+DG
Sbjct: 120 TLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDG 159


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 209/406 (51%), Gaps = 7/406 (1%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP   +  +++ G   K+   D+ L +F ++   G  P+  T+S LIN  C  GRV+  F
Sbjct: 417 SPDTFTYTSMILGHCRKHD-LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 475

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            ++  ++     P A T T  I  LC      +A  LF   +   CEP+V+TY  LI+GL
Sbjct: 476 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 535

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C +G   VA+ LF  M+  +G F     PNTVTYN +I+ L +   +  A  +   M   
Sbjct: 536 CVSGLLKVAIGLFHRMSR-DGVF-----PNTVTYNALINILVENRRIKYAFVVLNLMGRN 589

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            +  ++VTY  +I+G+C   D  +A  +   M+ +G   ++VT++ I+   C +G    A
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R+L+LM   G  P+ ++Y  LI G+C   K++ A  LF  M  +G   + V+Y  LI+ 
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YCK++ ++ A SL   M   G +P V TYN L  GL + +    A +L   M    +  +
Sbjct: 710 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY   IDGLCK+G    ALE+F  + +     N+++Y+ LI  L
Sbjct: 770 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 196/384 (51%), Gaps = 6/384 (1%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
            V+  + R+ S G+ P++  ++ +IN  CK G V+    ++ ++  S  +P+  T+TS+I
Sbjct: 368 AVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI 427

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            G C +  +  A  +F +     CEP+  TY+TLINGLC +G    A +L  EM      
Sbjct: 428 LGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----L 483

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
            G++  P   T    I  LC  G  + A  LF+ MK++   P+V TYT++I G C +   
Sbjct: 484 HGIL--PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 541

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A  LF  M   GV P+ VT++ +++ L +N ++  A  +L LM   G+  N  TYN +
Sbjct: 542 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEM 601

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I GYC+      A  +  +M   G   ++V+YNT+I  YC + +   AL +   M   G 
Sbjct: 602 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 661

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP   +Y  L  G  +I ++E A  LF+EM  + +  +  TY   IDG CK   +  A  
Sbjct: 662 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 721

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   ++ S    N+ +YN LI GL
Sbjct: 722 LLEHMKRSGCRPNVQTYNVLIHGL 745



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 194/383 (50%), Gaps = 10/383 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           +S    L+ +GL   ++ +S L+    ++G  +       R+L     PN + + ++I  
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394

Query: 187 LCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           LC +  + +A  +  K  VF  E  PD FTY ++I G CR      AL +F +MA     
Sbjct: 395 LCKDGNVADAETIMKK--VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-- 450

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
               C+PNTVTY+T+I+GLC  G V++A +L  +M    I P   T T  I   C    +
Sbjct: 451 ----CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            +A RLF++M ++G +P+V T++ ++  LC +G +  A  L   M   GV PNT TYN L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+      +I +A  +   M  NG   ++V+YN +I  YC   D ++A+ + + ML +G 
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
              +VTYNT+  G  +      AL++ D MR      D ++Y   I G CK   +  A  
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
           LF  + D     N V+Y  LIDG
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDG 709



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 143/338 (42%), Gaps = 23/338 (6%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++N+L   L K  ++     L K +   G+FP++ T++ +I+  CK G  S    +
Sbjct: 733  PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++     PN +T++SLI+ L  E ++ EA  LF +       PD  TY  +I     
Sbjct: 793  FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            +G    A N    M          C+P   TY  +I GL  E  +   +   L       
Sbjct: 853  SGKVEHAFNFLGRMIKAG------CQPTLWTYGVLIKGLKNEYLLADQRLAAL------- 899

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             PDVV   S    F Y     +A  +    +  +D G+   V   + ++  L   G+  +
Sbjct: 900  -PDVVPNCS----FGYQTTDQDAVSVMSAKLAELDPGLSVQVQ--NALVSNLSTAGRWFE 952

Query: 342  ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            A+ LL  MI +G+ P+   YN+L+        +D A  +F  M + GC   +  Y  LI 
Sbjct: 953  ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 1012

Query: 402  WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
              C+    +EA   +  ML +   P  V    L  GL 
Sbjct: 1013 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLL 1050



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 23/393 (5%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   ++  L     K++  DT  SL + +  +G  P++ T+++LI+   K    S    +
Sbjct: 698  PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               ++     PN VT+T++I GLC       A  +F K     C P++ TY++LI  L +
Sbjct: 758  CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G    A NLF E+       G++  P+ +TY  +I+     G V+ A     +M     
Sbjct: 818  EGKVEEAENLFAELE----RHGLI--PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 871

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV-TFSVIMDELCKNGKMDKAS 343
             P + TY  +I+G    N++  A +    +      PDVV   S       ++     ++
Sbjct: 872  QPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCSFGYQTTDQDAVSVMSA 923

Query: 344  RLLELMIWRGVNP--NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            +L EL      +P  +    N L+       +   A +L  SM S G   D  +YN+L+ 
Sbjct: 924  KLAEL------DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLC 977

Query: 402  WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
               + ++V+ A+ ++  M ++G +  +  Y  L   L ++H+ + A   F+ M       
Sbjct: 978  SLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP 1037

Query: 462  DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            D       IDGL + G+    +E    +   +Y
Sbjct: 1038 DDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 1070



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 299 CYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGK----MDKASRLLELMIWRG 353
           C++ +       F++M+ Q G++  +  +S ++  L + G     MD+  R+L      G
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS----EG 380

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V PN   YN +I+  C    +  A  +   +  +    D  +Y ++I  +C+  D++ AL
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++++M  +G +P  VTY+TL  GL +  +V  A  L  EM  + +    +T    I  L
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C  G   +A  LF  +++   E N+ +Y  LI GL
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 535



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 6/155 (3%)

Query: 142  IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
            +   + L++     GR      +LG ++     P+   + SL+  L     +  A  +F 
Sbjct: 934  VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 993

Query: 202  KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                  CE  +  Y  LI  LC+      A   FE M            P+ V    +ID
Sbjct: 994  HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM------LMRTWNPDDVVQAVLID 1047

Query: 262  GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
            GL ++G+ D   E    M+     P    YT + R
Sbjct: 1048 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 1082


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 191/401 (47%), Gaps = 10/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+  L     +    D  + LF  ++     PD++ ++ L+   CK GR   G ++L 
Sbjct: 81  VVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLR 136

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+    + P+   + +++   C E +  EA  +  +       P V T   +IN  C+ G
Sbjct: 137 RMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 196

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL + E M          CKPN  TYN ++ G C EG V KA  L  KM+   +NP
Sbjct: 197 RMSDALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNP 250

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY  +IRG C       A RL   M   G+  D  T++ +++ LCK+G+ D+A  L 
Sbjct: 251 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 310

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  RG+ PN  T+N+LI+G C + K+D A K    M S GC  D  +Y++ I   CK 
Sbjct: 311 DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K  +E LS   EML K +KP+ V Y  +   L +        + + EM  +    D  TY
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +   C  G + EA  +   +  +   ++ ++YN L+DG
Sbjct: 431 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 471



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 10/400 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N +   L +     + L     +  +G  PD YT + LI  +C+  +V     +  ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
               F  + V++ +LI+G C   RI EA  LF +      +PD+  Y  L+ GLC+ G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
              L +   M     E G   +P+T  Y  ++D  C E    +A+E+  +M ++ + P V
Sbjct: 129 EEGLLMLRRMK----ELG--WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VT T+VI  +C     ++A R+   M  +G +P+V T++ ++   C  GK+ KA  LL  
Sbjct: 183 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   GVNP+  TYN LI G C+   I+ A +L   ME +G + D  +YN LIN  CK+  
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 302

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
            ++A SL+  + ++GIKP  VT+N+L  GL +  +V+ A K  ++M       DTYTY++
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FI+ LCK     E L     +     + + V+Y  +I  L
Sbjct: 363 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 402



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 189/424 (44%), Gaps = 48/424 (11%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGL 187
           + + +   GL P + T + +IN +CK GR+S    VL  + LR C  PN  T+ +L++G 
Sbjct: 169 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC-KPNVWTYNALVQGF 227

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG------ 241
           C E ++ +A AL  K RV    PD  TYN LI G C  GH   A  L   M         
Sbjct: 228 CNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 287

Query: 242 ---NGEFGVVCK--------------------PNTVTYNTIIDGLCKEGFVDKAKELFLK 278
              N     +CK                    PN VT+N++I+GLCK G VD A +   K
Sbjct: 288 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEK 347

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M      PD  TY+S I   C      E      EM+ + V+P  V +++++ +L K   
Sbjct: 348 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 407

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
               +R    M+  G NP+  TY T +  YC+  +++ A  + + M  NG   D ++YNT
Sbjct: 408 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK--------- 449
           L++ +      + A+S+  +M S    P   TY  L   L  +  VE  L          
Sbjct: 468 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 527

Query: 450 --------LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
                   LFD M++N    ++ TY++ ++G  + G   EA  L   +++    LN   Y
Sbjct: 528 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 587

Query: 502 NCLI 505
             L+
Sbjct: 588 TALV 591



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 202/473 (42%), Gaps = 59/473 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL + + M ++    P V ++N L             ++L  ++   G+ PD  T+++
Sbjct: 199 SDALRVLELM-KLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNL 257

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C  G +   F +L  +       +  T+ +LI  LC + R  +A +LF       
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+  T+N+LINGLC++G   +A    E+M +        C P+T TY++ I+ LCK  
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG------CTPDTYTYSSFIEHLCKMK 371

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +      +M  +++ P  V YT VI       ++    R + EM+  G  PDVVT++
Sbjct: 372 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 431

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             M   C  G++++A  +L  M   GV  +T  YNTL+DG+    + DHA  +   M S 
Sbjct: 432 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 491

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-----------------PTVVT 430
             + +  +Y  L+    + + VE+ L L    + K I+                 P   T
Sbjct: 492 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 551

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVA--ADTYT----------------------- 465
           Y+++  G  E  + E A  L   M+ + ++   D YT                       
Sbjct: 552 YSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMI 611

Query: 466 ----------YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                     Y + + GL   G   +A E+F   R   Y  + + +  +IDGL
Sbjct: 612 QHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 664



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 20/349 (5%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  +   F++  CK  G          E L     ML+    P  V+ + I+   L K +
Sbjct: 356 DTYTYSSFIEHLCKMKGS--------QEGLSFIGEMLQKDVKPSTVN-YTIVIHKLLKER 406

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           +Y  V   +  + S+G  PD+ T++  +  +C  GR++    VL  + ++  T + + + 
Sbjct: 407 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 466

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE----- 236
           +L+ G  +  +   A ++  +    A  P+ FTY  L+  L R       L L       
Sbjct: 467 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 526

Query: 237 --EMANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
             E+ +  G F V+ K    PN+ TY++I++G  ++G  ++A  L   MK+++I+ +   
Sbjct: 527 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 586

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YT+++  FC +  + +A  L   M+  G  P ++++  ++  L   G+ DKA  +     
Sbjct: 587 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSR 646

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           W+  +P+   +  +IDG       D +R++ + +E   C     +Y  L
Sbjct: 647 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 695



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 156/395 (39%), Gaps = 51/395 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD  L      P   +FN L   L K+   D      +++ SAG  PD YT+S 
Sbjct: 304 DQACSLFDS-LETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   CKM     G   +G +L+    P+ V +T +I  L  E      A  + +     
Sbjct: 363 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 422

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFG------ 246
           C PDV TY T +   C  G    A N+  EM+               +G+   G      
Sbjct: 423 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 482

Query: 247 --------VVCKPNTVTYNTIIDGLCKEGFVD-----------KAKEL------FLKMKD 281
                   V   PN  TY  ++  L +   V+           KA EL      F  MK 
Sbjct: 483 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 542

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+  TY+S++ GF       EA  L   M +  +  +   ++ ++   CK+ +   
Sbjct: 543 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 602

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L+  MI  G  P+  +Y  L+ G     + D A+++F++        D + +  +I+
Sbjct: 603 AWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 662

Query: 402 WYCK--NKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
              K  + D+   + +  E ++   +P+  TY  L
Sbjct: 663 GLIKKGHSDISREMIIMLERMN--CRPSHQTYAML 695



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 27/244 (11%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---------- 158
           ++N L    A     D  +S+ K++ S    P+ +T+ IL+    +M  V          
Sbjct: 464 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 523

Query: 159 -------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--KHRVFACE 209
                  +  F +   + ++ F PN+ T++S+++G   + R  EA +L +  K    +  
Sbjct: 524 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 583

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D++T   L+   C++   + A  L   M     + G +  P+ ++Y  ++ GL  EG  
Sbjct: 584 EDIYT--ALVTCFCKSKRYLDAWVLVCSMI----QHGFI--PHLMSYQHLLSGLICEGQT 635

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DKAKE+F+  + ++ +PD + +  +I G       + ++ + I +     +P   T++++
Sbjct: 636 DKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 695

Query: 330 MDEL 333
            +EL
Sbjct: 696 TEEL 699


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 189/379 (49%), Gaps = 11/379 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +    LF+ +   G+ PD+YT++ L++ FCK+G +      
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    PN VT+T+LI       ++  A  +F       C P++ TY  LI+G C+
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 225 TGHTIVALNLFEEMANGNGE-------FGVV----CKPNTVTYNTIIDGLCKEGFVDKAK 273
            G T  A  ++  M N   +       F +V     +PN VTY  ++DGLCK   V +A+
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  E   P+ + Y ++I GFC     +EA+ +F +M+  G  P+V T+S ++D+L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K+ ++D A ++L  M+     PN   Y  ++DG C   K D A +L + ME  GC  +V
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + K   V+  L L   M SKG  P  +TY  L         ++ A KL +E
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479

Query: 454 MRRNHVAADTYTYNNFIDG 472
           M++ +       Y   I+G
Sbjct: 480 MKQTYWPKHIGMYRKVIEG 498



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 207/418 (49%), Gaps = 26/418 (6%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F     C+ K   ++   ++ + + S G  PD  T+S +I   C   +V   F +  
Sbjct: 90  VCNFTRCLCCIGK---FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQ 146

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R+  TP+  T+T+L+   C    I +A   F + +   C P+V TY  LI+   +T 
Sbjct: 147 EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN- 285
               A  +FE M + NG     C PN VTY  +IDG CK G  +KA +++ +MK++ ++ 
Sbjct: 207 KLSRANEIFEMMLS-NG-----CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDI 260

Query: 286 ----------------PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
                           P+VVTY +++ G C A+   EA+ L   M  +G +P+ + +  +
Sbjct: 261 PDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDAL 320

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  CK GK+D+A  +   M+  G +PN YTY++LID      ++D A K+   M  N C
Sbjct: 321 IDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSC 380

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +VV Y  +++  CK    +EA  L   M  KG  P VVTY  +  G  +  +V+R L+
Sbjct: 381 APNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLE 440

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L   M     A +  TY   I+  C +G + +A +L   ++ + +  +I  Y  +I+G
Sbjct: 441 LLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEG 498



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 200/431 (46%), Gaps = 64/431 (14%)

Query: 135 SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC------ 188
           + G +P     + L++ +C+ G   + + +L +++   + P  V +  LI G+C      
Sbjct: 4   TEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLP 63

Query: 189 ----------AESRIMEAAALFTK------HRVFAC-------------------EPDVF 213
                     A + ++E   +  K       R   C                    PD  
Sbjct: 64  SMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSS 123

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TY+ +I  LC       A  LF+EM   NG       P+  TY T++D  CK G +++A+
Sbjct: 124 TYSKVIGYLCNASKVEKAFQLFQEMKR-NG-----ITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
             F +M+ +   P+VVTYT++I  +      + A  +F  M+  G  P++VT++ ++D  
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 334 CKNGKMDKASRLLELM------------IWRGVN-----PNTYTYNTLIDGYCLTDKIDH 376
           CK G+ +KA ++   M             +R V+     PN  TY  L+DG C   K+  
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKE 297

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           AR L  +M   GC  + + Y+ LI+ +CK   ++EA  ++++ML  G  P V TY++L  
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            LF+  +++ ALK+  +M  N  A +   Y   +DGLCK G   EA  L   + +     
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 497 NIVSYNCLIDG 507
           N+V+Y  +IDG
Sbjct: 418 NVVTYTAMIDG 428



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 203/432 (46%), Gaps = 27/432 (6%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M +     P V ++  L     K +       +F+ + S G  P+I T++ LI+  C
Sbjct: 180 FDEM-QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238

Query: 154 KMGRVSHGFVVLGRILRSCF-----------------TPNAVTFTSLIKGLCAESRIMEA 196
           K G       +  R+                       PN VT+ +L+ GLC   ++ EA
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L     +  CEP+   Y+ LI+G C+ G    A  +F +M  G+G     C PN  TY
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML-GHG-----CSPNVYTY 352

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           +++ID L K+  +D A ++  KM + +  P+VV YT ++ G C     +EA RL + M +
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G  P+VVT++ ++D   K G++D+   LL+LM  +G  PN  TY  LI+  C    +D 
Sbjct: 413 KGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDD 472

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A KL   M+       +  Y  +I  +  + +   +L L +E+   G  P +  Y  L  
Sbjct: 473 AHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLID 530

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
              +  ++E AL+L +E+  +  AA   TY + I+ L  +  V +A +L+  +    +  
Sbjct: 531 NFIKAGRLEMALELHEEL-SSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVP 589

Query: 497 NIVSYNCLIDGL 508
            +    CLI GL
Sbjct: 590 ELSMLVCLIKGL 601



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 169/360 (46%), Gaps = 22/360 (6%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           I   C+ P+ + F SL+   C       A  L  K  +   +P    YN LI G+C T  
Sbjct: 3   ITEGCY-PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 228 --TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
             ++  + L E   N   E GVV   N V        LC  G  +KA  +  +M  +   
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVL--NKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFI 119

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PD  TY+ VI   C A+   +A +LF EM   G+ PDV T++ ++D  CK G +++A   
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + M   G  PN  TY  LI  Y  T K+  A ++F  M SNGC+ ++V+Y  LI+ +CK
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 406 NKDVEEALSLYSEMLSKGI-----------------KPTVVTYNTLFLGLFEIHQVERAL 448
             + E+A  +Y+ M +  +                 +P VVTY  L  GL + H+V+ A 
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L + M       +   Y+  IDG CK G + EA E+F  +       N+ +Y+ LID L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 166/358 (46%), Gaps = 40/358 (11%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F+ ++S    P++ T+  L++  CK  +V     +L  +      PN + + +LI G C 
Sbjct: 267 FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCK 326

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
             ++ EA  +FTK     C P+V+TY++LI+ L +     +AL +  +M   +      C
Sbjct: 327 VGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS------C 380

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN V Y  ++DGLCK G  D+A  L L M+++   P+VVTYT++I GF  A   +    
Sbjct: 381 APNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLE 440

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM----------IWR------- 352
           L   M  +G  P+ +T+ V+++  C  G +D A +LLE M          ++R       
Sbjct: 441 LLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFS 500

Query: 353 ----------------GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
                           G  P    Y  LID +    +++ A +L   + S    +   +Y
Sbjct: 501 HEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TY 559

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +LI        V++A  LYS+M  +G  P +     L  GL  + + E AL+L D +
Sbjct: 560 VSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 58/288 (20%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN-- 336
           M  E   P  + + S++  +C + D+  A +L  +M+  G QP  V +++++  +C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 337 ---------------------------------------GKMDKASRLLELMIWRGVNPN 357
                                                  GK +KA  ++  M+ +G  P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           + TY+ +I   C   K++ A +LF  M+ NG   DV +Y TL++ +CK   +E+A + + 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           EM   G  P VVTY  L     +  ++ RA ++F+ M  N    +  TY   IDG CK+G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 478 FVLEALELFRAIRDSKYEL-----------------NIVSYNCLIDGL 508
              +A +++  +++ K ++                 N+V+Y  L+DGL
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGL 289



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 132/329 (40%), Gaps = 47/329 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  ML  H   P V +++ L   L K+K  D  L +  ++      P++  ++ 
Sbjct: 331 DEAQEVFTKMLG-HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTE 389

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK+G+    + ++  +      PN VT+T++I G     R+     L        
Sbjct: 390 MVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG 449

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TY  LIN  C  G                                         
Sbjct: 450 CAPNFITYRVLINHCCAAG----------------------------------------- 468

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +L  +MK       +  Y  VI GF  ++++  +  L  E+ + G  P +  + 
Sbjct: 469 LLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYK 526

Query: 328 VIMDELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +++D   K G+++ A  L  EL  +     NTY   +LI+   L  K+D A KL+  M  
Sbjct: 527 LLIDNFIKAGRLEMALELHEELSSFSAAYQNTYV--SLIESLTLACKVDKAFKLYSDMTR 584

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            G + ++     LI    +    EEAL L
Sbjct: 585 RGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 41/199 (20%)

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           +MI  G  P+   +N+L+  YC +    +A KL   M   G     V YN LI   C  +
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 408 DV-----------------------------------------EEALSLYSEMLSKGIKP 426
           D+                                         E+A ++  EM+SKG  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              TY+ +   L    +VE+A +LF EM+RN +  D YTY   +D  CK G + +A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 487 RAIRDSKYELNIVSYNCLI 505
             ++      N+V+Y  LI
Sbjct: 181 DEMQQDGCAPNVVTYTALI 199


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 218/468 (46%), Gaps = 60/468 (12%)

Query: 95  DYMLRMHPSPPPVSSFNILFGCLAK---NKHYDTVLSLFK----------------RLNS 135
           +YML        V     +F  + K   N++ +T L++FK                ++  
Sbjct: 126 NYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQ 185

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           AG   + Y+++ LI    + G       V  R++     P+  T+++L+  L        
Sbjct: 186 AGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGT 245

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
              L  +       P+++TY   I  L R G    A  + + M +        C P+ VT
Sbjct: 246 IMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG------CGPDVVT 299

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  +ID LC  G +DKAKEL+ KM+  +  PD+VTY +++  F    D    KR + EM 
Sbjct: 300 YTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEME 359

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G  PDVVT++++++ LCK+GK+D+A  +L++M  RG+ PN +TYNTLI G     ++D
Sbjct: 360 ADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLD 419

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV------- 428
            A +LF +MES G      SY   I++Y K  D E+AL  + +M  +GI P++       
Sbjct: 420 EALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASL 479

Query: 429 ----------------------------VTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
                                       VTYN +     +  Q+++A KL  EM      
Sbjct: 480 YSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCE 539

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D    N+ ID L K+G V EA ++F  ++D K    +V+YN LI GL
Sbjct: 540 PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGL 587



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 219/421 (52%), Gaps = 9/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+      P + +++ L   L + +   T++ L + + + GL P+IYT++I 
Sbjct: 210 EALKVYKRMIS-EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTIC 268

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    + GR+   + +L  +      P+ VT+T LI  LCA  ++ +A  L+TK R  + 
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD+ TY TL++     G        + EM A+G         P+ VTY  +++ LCK G
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYA-------PDVVTYTILVEALCKSG 381

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A ++   M+   I P++ TY ++I G       +EA  LF  M   GV P   ++ 
Sbjct: 382 KVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYV 441

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           + +D   K G  +KA    E M  RG+ P+    N  +       +I  A+ +F  + + 
Sbjct: 442 LFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YN ++  Y K   +++A  L +EMLS+G +P ++  N+L   L++  +V+ A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++F  ++   +A    TYN  I GL K G +L+AL+LF ++++S    N V++N L+D 
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621

Query: 508 L 508
           L
Sbjct: 622 L 622



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 194/388 (50%), Gaps = 7/388 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P + ++  L          +TV   +  + + G  PD+ T++IL+   CK G+
Sbjct: 323 MRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGK 382

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   F +L  +      PN  T+ +LI GL    R+ EA  LF         P  ++Y  
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            I+   + G    AL+ FE+M     + G++  P+    N  +  L + G + +AK++F 
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMK----KRGIM--PSIAACNASLYSLAEMGRIREAKDIFN 496

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            + +  ++PD VTY  +++ +  A   ++A +L  EM+ +G +PD++  + ++D L K G
Sbjct: 497 DIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAG 556

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++D+A ++   +    + P   TYN LI G     K+  A  LF SM+ +GC  + V++N
Sbjct: 557 RVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFN 616

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            L++  CKN  V+ AL ++  M      P V+TYNT+  GL +  +   A   + +M++ 
Sbjct: 617 ALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK- 675

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALEL 485
            ++ D  T    + G+ K G V +A+++
Sbjct: 676 FLSPDHVTLYTLLPGVVKDGRVEDAIKI 703



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 175/343 (51%), Gaps = 7/343 (2%)

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFT-PNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI   CK  +      +  +  +S  T P   ++  L+ GL   +    A  LF + +  
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             C P++FTYN L++   ++        L+ EM          CKPN +T+N II  L K 
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRG------CKPNIITHNIIISALVKS 871

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              ++KA +L+ ++   + +P   TY  +I G   A    EA ++F EM D   +P+   +
Sbjct: 872  NSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIY 931

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +++++   K G ++ A  L + MI  G+ P+  +Y  L++   +T ++D A   F  ++ 
Sbjct: 932  NILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL 991

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   D VSYN +IN   K++ +EEALSL+SEM ++GI P + TYN L L       V++
Sbjct: 992  TGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQ 1051

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            A K+F+E++   +  + +TYN  I G  KSG    A  +F+ +
Sbjct: 1052 AGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 192/415 (46%), Gaps = 7/415 (1%)

Query: 94   FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            F + ++   SP  V+ + +L G +   +  D +  + + ++ +GL         L+ C  
Sbjct: 669  FYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECIL 728

Query: 154  KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDV 212
                +         ++ +    +      LI+ LC + + ++A  LF K  +     P  
Sbjct: 729  IEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTP 788

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             +YN L++GL     T  AL LF EM N        C PN  TYN ++D   K   +D+ 
Sbjct: 789  ESYNCLMDGLLGCNITEAALKLFVEMKNAG------CCPNIFTYNLLLDAHGKSKRIDEL 842

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             EL+ +M      P+++T+  +I     +N  N+A  L+ E++     P   T+  ++  
Sbjct: 843  FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            L K G+ ++A ++ E M      PN   YN LI+G+     ++ A  LF  M   G   D
Sbjct: 903  LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962

Query: 393  VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + SY  L+        V++A+  + E+   G+ P  V+YN +  GL +  ++E AL LF 
Sbjct: 963  LKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS 1022

Query: 453  EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            EM+   ++ + YTYN  I     +G V +A ++F  ++    E N+ +YN LI G
Sbjct: 1023 EMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRG 1077



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 174/342 (50%), Gaps = 11/342 (3%)

Query: 94   FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            F   L  HP+P    S+N L   L      +  L LF  + +AG  P+I+T+++L++   
Sbjct: 778  FTKSLGTHPTP---ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHG 834

Query: 154  KMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K  R+   F +   +L R C  PN +T   +I  L   + I +A  L+ +       P  
Sbjct: 835  KSKRIDELFELYNEMLCRGC-KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             TY  LI GL + G +  A+ +FEEM +        CKPN   YN +I+G  K G V+ A
Sbjct: 894  CTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ------CKPNCAIYNILINGFGKAGNVNIA 947

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +LF +M  E I PD+ +YT ++         ++A   F E+   G+ PD V+++++++ 
Sbjct: 948  CDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMING 1007

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            L K+ ++++A  L   M  RG++P  YTYN LI  +     +D A K+F  ++  G   +
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPN 1067

Query: 393  VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            V +YN LI  + K+ + + A S++ +M+  G  P   T+  L
Sbjct: 1068 VFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 149/297 (50%), Gaps = 6/297 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + ++N+L     K+K  D +  L+  +   G  P+I TH+I+I+   K   ++    +
Sbjct: 821  PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               I+   F+P   T+  LI GL    R  EA  +F +   + C+P+   YN LING  +
Sbjct: 881  YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G+  +A +LF+ M           +P+  +Y  +++ L   G VD A   F ++K   +
Sbjct: 941  AGNVNIACDLFKRMIKEG------IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            +PD V+Y  +I G   +    EA  LF EM ++G+ P++ T++ ++      G +D+A +
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            + E + + G+ PN +TYN LI G+  +   D A  +F  M   GC  +  ++  L N
Sbjct: 1055 MFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 191/469 (40%), Gaps = 65/469 (13%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +   N L   L K    D    +F RL    L P + T++ILI    K G++     +
Sbjct: 540  PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDL 599

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT------- 217
             G +  S   PN VTF +L+  LC    +  A  +F +  +  C PDV TYNT       
Sbjct: 600  FGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIK 659

Query: 218  ---------------------------LINGLCRTGHTIVALNLFEEMANGNG------- 243
                                       L+ G+ + G    A+ +  E  + +G       
Sbjct: 660  EGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719

Query: 244  --------------------EFGVVCKPNTVTYNTI---IDGLCKEGFVDKAKELFLKM- 279
                                  G+VC       N I   I  LCK+     AK+LF K  
Sbjct: 720  WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFT 779

Query: 280  KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            K    +P   +Y  ++ G    N    A +LF+EM + G  P++ T+++++D   K+ ++
Sbjct: 780  KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839

Query: 340  DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            D+   L   M+ RG  PN  T+N +I     ++ I+ A  L+  + S        +Y  L
Sbjct: 840  DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPL 899

Query: 400  INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
            I    K    EEA+ ++ EM     KP    YN L  G  +   V  A  LF  M +  +
Sbjct: 900  IGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI 959

Query: 460  AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              D  +Y   ++ L  +G V +A+  F  ++ +  + + VSYN +I+GL
Sbjct: 960  RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGL 1008



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 7/211 (3%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVV----TFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +D N A   F +M+ Q   P++V    T + +++ L  +G+++  + + +LM  + +N N
Sbjct: 100 SDPNSALSYF-KMVSQ--LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRN 156

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             TY T+     +   I  A      M   G + +  SYN LI +  +    +EAL +Y 
Sbjct: 157 PNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYK 216

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
            M+S+G+KP++ TY+ L + L         + L +EM    +  + YTY   I  L ++G
Sbjct: 217 RMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAG 276

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + +A  + + + D     ++V+Y  LID L
Sbjct: 277 RIDDAYGILKTMEDEGCGPDVVTYTVLIDAL 307



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 58/123 (47%)

Query: 98   LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
            L++    P   S+N++   L K++  +  LSLF  + + G+ P++YT++ LI  F   G 
Sbjct: 989  LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048

Query: 158  VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
            V     +   +      PN  T+ +LI+G         A ++F K  +  C P+  T+  
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQ 1108

Query: 218  LIN 220
            L N
Sbjct: 1109 LPN 1111


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 222/435 (51%), Gaps = 11/435 (2%)

Query: 74  CKSS-GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR 132
           CK + G+ DI+     +A  I + M R   SP  V+    ++G L +  + ++ L   + 
Sbjct: 260 CKGNFGEADID---TRQATEILEEMERNGESPTVVTYSTYIYG-LCRVGYVESALDFVRS 315

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           L SA    ++Y ++ +I+  CK G +     VL  +     +P+  T++ LI G C +  
Sbjct: 316 LISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGD 375

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + +   L  + +    EP + +Y++L +GLC+   + ++L++F ++     ++      +
Sbjct: 376 VEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKY------D 429

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
              Y+ +I G C +G +D A +L  +M   N+ PD   + S++ GFC    W  A   F 
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M++ G+ P + T +VI+D  C+ G++++A  L+  M  +G+ PN +TYN +I+  C   
Sbjct: 490 MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER 549

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           K + A +LF  M     +  VV Y+TLI+ + K  + ++AL LY+ ML  G+ P +V Y 
Sbjct: 550 KSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYT 609

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L   L    ++  A  LF +M  N +  D  +Y + I G C+ G + +A  LF  +   
Sbjct: 610 ILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQR 669

Query: 493 KYELNIVSYNCLIDG 507
            +   +V+Y  L+DG
Sbjct: 670 GHLPTVVTYTSLVDG 684



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S++ LF  L K +  D  L +F+ L +AG   D   +SILI  FC  G +     +
Sbjct: 393 PSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKL 452

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++R+   P+   F SL+ G C     + A   F         P + T N +I+  CR
Sbjct: 453 MEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCR 512

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    ALNL  EM    G F     PN  TYN +I+ LCKE   ++A ELF  M   N+
Sbjct: 513 EGRVEEALNLMNEMQT-QGIF-----PNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P VV Y+++I GF   ++  +A  L+  M+  GV PD+V ++++++ LC   +M +A  
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M   G+ P+  +Y ++I G+C    +  A  LF  M   G +  VV+Y +L++ YC
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYC 686

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   ++ A  L  EM  KGI P VVTYN L         +++AL++ +EM+ N V  D  
Sbjct: 687 KMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHM 746

Query: 465 TY 466
           TY
Sbjct: 747 TY 748



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 207/421 (49%), Gaps = 41/421 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N +   L K    D  L + + + S G+ PD+YT+SILI+ FCK G V  G  ++ 
Sbjct: 325 VYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIE 384

Query: 167 RILRSCFTPNAVTFTSLIKGLCAES---------RIMEAAA------------------- 198
            +  S   P+ V+++SL  GLC +          R + AA                    
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG 444

Query: 199 -LFTKHRVFA------CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
            L + H++          PD   + +L++G C+ G  + AL  F  M  G    G++  P
Sbjct: 445 DLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG----GIL--P 498

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           +  T N IID  C+EG V++A  L  +M+ + I P++ TY +VI   C       A  LF
Sbjct: 499 SIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELF 558

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
             M+ + V P VV +S ++D   K     KA  L   M+  GV P+   Y  LI+  C  
Sbjct: 559 PLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHR 618

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            ++  A  LF  M  NG   D +SY ++I  +C+  D+ +A +L++EML +G  PTVVTY
Sbjct: 619 SRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTY 678

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
            +L  G  ++++++ A  L DEM+R  +  D  TYN  I    + G + +ALE+   +++
Sbjct: 679 TSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKE 738

Query: 492 S 492
           +
Sbjct: 739 N 739



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 168/366 (45%), Gaps = 47/366 (12%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG------HTIVALNLFE 236
           L+K L   +R     +LF + +     P+VFTY  ++N  C+         T  A  + E
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM   NGE      P  VTY+T I GLC+ G+V+ A +    +   N   +V  Y ++I 
Sbjct: 280 EMER-NGE-----SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIH 333

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C   + +EA ++  EM   G+ PDV T+S+++   CK G ++K   L+E M +  + P
Sbjct: 334 GLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEP 393

Query: 357 NTYTYNT-----------------------------------LIDGYCLTDKIDHARKLF 381
           +  +Y++                                   LI G+C+   +D A KL 
Sbjct: 394 SLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLM 453

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M  N    D  ++ +L++ +CK      AL  ++ ML  GI P++ T N +       
Sbjct: 454 EEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCRE 513

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +VE AL L +EM+   +  + +TYN  I+ LCK      ALELF  +       ++V Y
Sbjct: 514 GRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVY 573

Query: 502 NCLIDG 507
           + LIDG
Sbjct: 574 STLIDG 579



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 133/262 (50%), Gaps = 6/262 (2%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           + + ++ +I        ++ A ++FL+ K   +     +   +++    AN     + LF
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKN--GKMD----KASRLLELMIWRGVNPNTYTYNTLI 365
            EM   G  P+V T++++M+  CK   G+ D    +A+ +LE M   G +P   TY+T I
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G C    ++ A     S+ S   + +V  YN +I+  CK  +++EAL +  EM S GI 
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P V TY+ L  G  +   VE+ L L +EM+ +++     +Y++   GLCK      +L++
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
           FR +  + Y+ +  +Y+ LI G
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKG 439



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 46/229 (20%)

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID-HARKLF- 381
           + FS  M +   +  +D    ++ ++   G++   Y    L D  C  +K++  A +LF 
Sbjct: 109 IKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYA--LLRDIVCYYNKVNLDAFELFP 166

Query: 382 VSMES-NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           + +ES       V+ ++ LI  +  N  +E A+ ++ +    G++ +  + N L   L E
Sbjct: 167 ILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAE 226

Query: 441 IHQVERALKLFDEMR-----------------------------------------RNHV 459
            ++ E    LF+EM+                                         RN  
Sbjct: 227 ANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGE 286

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +    TY+ +I GLC+ G+V  AL+  R++  +   +N+  YN +I GL
Sbjct: 287 SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 200/417 (47%), Gaps = 41/417 (9%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L L +    AG  P +  +++LI+ +C+ G +  G ++LG +    F P  VT+ SLI  
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           L  +  + +  +LF + R     P+V  YN++I+ LC+      A+ + ++M      F 
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM------FA 337

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
             C P+ +T+NT+I GLC EG V KA+    +     +NP+ ++YT +I GFC   +   
Sbjct: 338 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMA 397

Query: 307 AKRLFIEMMDQGVQPDVVTFS-----------------------------------VIMD 331
           A  L +EMM +G  PDVVTF                                    V++ 
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK   +  A  +LE M+ + V P+ + Y TLIDG+  ++ +  ARK+F  ME  G   
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+VS N +I  YC+   + EA+   S M   G  P   TY T+  G  +   +  AL+  
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +M +     +  TY++ I+G CK+G    A  LF  ++      N+V+Y  LI  L
Sbjct: 578 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 634



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 194/399 (48%), Gaps = 31/399 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  L  CL K    + + SLF  +   GL P++  ++ +I+  CK    +   V+
Sbjct: 272 PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVI 331

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  S   P+ +TF +LI GLC E  + +A     +       P+  +Y  LI+G C 
Sbjct: 332 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 391

Query: 225 TGHTIVALNLFEEMANGNGE------FGVVCK------------------------PNTV 254
            G  + A +L  EM  G G       FG +                          P+  
Sbjct: 392 RGELMAASDLLMEMM-GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVN 450

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YN +I GLCK+  +  AK +  +M ++N+ PD   Y ++I GF  + +  +A+++F  M
Sbjct: 451 IYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 510

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             +GV+PD+V+ + ++   C+ G M +A   +  M   G  P+ +TY T+I GY     +
Sbjct: 511 EHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 570

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A +    M    C  +VV+Y++LIN YCK  D + A  L++ M ++ + P VVTY  L
Sbjct: 571 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 630

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
              LF+  +V RA   F+ M  NH + +  T +  ++GL
Sbjct: 631 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 160/362 (44%), Gaps = 27/362 (7%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M R H   P V +F  L   L         L + +++    +FPD+  +++LI+  
Sbjct: 402 LMEMMGRGHT--PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK   +     +L  +L     P+   + +LI G      + +A  +F         PD+
Sbjct: 460 CKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDI 519

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            + N +I G C+ G    A+     M        V C P+  TY T+I G  K+G ++ A
Sbjct: 520 VSCNAMIKGYCQFGMMSEAILCMSNMRK------VGCIPDEFTYTTVISGYAKQGNLNGA 573

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
                 M      P+VVTY+S+I G+C   D + A+ LF  M  + + P+VVT+++++  
Sbjct: 574 LRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGS 633

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY------------CLTDKIDHARKL 380
           L K  K+ +A    E M+    +PN  T + L++G             C T ++     L
Sbjct: 634 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL 693

Query: 381 FVSMESNGCMHDV-----VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            V  +    + D+      +YN +I   C++  + EAL   + M  KG  P  +T+ +L 
Sbjct: 694 LVVFKK--LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 751

Query: 436 LG 437
            G
Sbjct: 752 YG 753



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V   N L+  L        A  L++EM       G     +  +   ++ GLC EG V
Sbjct: 167 PEVTHCNRLLKLLVEQRRWDDARKLYDEM------LGEDSGADNYSTCVLVRGLCLEGRV 220

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++  +L          P VV Y  +I G+C   D      L  EM  +G  P +VT+  +
Sbjct: 221 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSL 280

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ L K G ++K   L   M  RG++PN   YN++ID  C       A  +   M ++GC
Sbjct: 281 INCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGC 340

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D++++NTLI   C    V +A     E + + + P  ++Y  L  G     ++  A  
Sbjct: 341 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASD 400

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L  EM       D  T+   I GL  +G V EAL +   + + +   ++  YN LI GL
Sbjct: 401 LLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 1/259 (0%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P  + ++T++  L +    D   +    M      P      +++  +  A    +A  +
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 311 FIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
              + +Q G  P+V   + ++  L +  + D A +L + M+      + Y+   L+ G C
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLC 215

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           L  +++   KL  +    GC+  VV YN LI+ YC+  D+   L L  EM +KG  PT+V
Sbjct: 216 LEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLV 275

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY +L   L +   +E+   LF EMR+  ++ +   YN+ ID LCK     +A+ + + +
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335

Query: 490 RDSKYELNIVSYNCLIDGL 508
             S  + +I+++N LI GL
Sbjct: 336 FASGCDPDIITFNTLITGL 354



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 129/319 (40%), Gaps = 56/319 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+ +N+L   L K        ++ + +    + PD + ++ LI+ F +   +     +
Sbjct: 447 PDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 506

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+ V+  ++IKG C    + EA    +  R   C PD FTY T+I+G  +
Sbjct: 507 FEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 566

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL    +M          CKPN VTY+++I+G CK G  D A+ LF  M+ E +
Sbjct: 567 QGNLNGALRWLCDMIKRK------CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 620

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT------------------- 325
           +P+VVTYT +I      +    A   F  M+     P+ VT                   
Sbjct: 621 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 680

Query: 326 -------------------------------FSVIMDELCKNGKMDKASRLLELMIWRGV 354
                                          ++ I+  LC++  + +A      M  +G 
Sbjct: 681 CCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGY 740

Query: 355 NPNTYTYNTLIDGYCLTDK 373
            PN  T+ +L+ G+C   K
Sbjct: 741 VPNPITFLSLLYGFCSVGK 759


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 33/444 (7%)

Query: 97  MLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           M +M  S   P + ++N +     K   +   + L   + S G+  D+ T+++LI+  C+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
             R++ G+++L  + +    PN VT+ +LI G   E +++ A+ L  +   F   P+  T
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 215 YNTLINGLCRTGHTIVALNLFEEM-ANG-----------------NGEFGV--------- 247
           +N LI+G    G+   AL +F  M A G                 N EF +         
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 248 ---VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
              VC    +TY  +IDGLCK GF+D+A  L  +M  + I+PD+VTY+++I GFC    +
Sbjct: 436 RNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             AK +   +   G+ P+ + +S ++   C+ G + +A R+ E MI  G   + +T+N L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +   C   K+  A +    M S+G + + VS++ LIN Y  + +  +A S++ EM   G 
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            PT  TY +L  GL +   +  A K    +     A DT  YN  +  +CKSG + +A+ 
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF  +       +  +Y  LI GL
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGL 698



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++L IF  M  ++   P V + N + G + K+    +V S  K +    + PD+ T +I
Sbjct: 180 QDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  G       ++ ++ +S + P  VT+ +++   C + R   A  L    +   
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + DV TYN LI+ LCR+        L  +M         +  PN VTYNT+I+G   EG
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK------RMIHPNEVTYNTLINGFSNEG 352

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A +L  +M    ++P+ VT+ ++I G     ++ EA ++F  M  +G+ P  V++ 
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCKN + D A      M   GV     TY  +IDG C    +D A  L   M  +
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+V+Y+ LIN +CK    + A  +   +   G+ P  + Y+TL      +  ++ A
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++++ M       D +T+N  +  LCK+G V EA E  R +       N VS++CLI+G
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 207/457 (45%), Gaps = 31/457 (6%)

Query: 83  NLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           +++   E + ++ ++  M      P V++FNIL   L     ++    L +++  +G  P
Sbjct: 207 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 266

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
            I T++ +++ +CK GR      +L  +       +  T+  LI  LC  +RI +   L 
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN------------------GN 242
              R     P+  TYNTLING    G  ++A  L  EM +                    
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386

Query: 243 GEFGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           G F    K           P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T +I G C     +EA  L  EM   G+ PD+VT+S +++  CK G+   A  ++  +  
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G++PN   Y+TLI   C    +  A +++ +M   G   D  ++N L+   CK   V E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A      M S GI P  V+++ L  G     +  +A  +FDEM +       +TY + + 
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G + EA +  +++      ++ V YN L+  +
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 7/352 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+ S  F  L    R C   N   +  LI+    E  I ++  +F    ++   P V+T 
Sbjct: 143 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 201

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N ++  + ++G  +   +  +EM         +C P+  T+N +I+ LC EG  +K+  L
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 255

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             KM+     P +VTY +V+  +C    +  A  L   M  +GV  DV T+++++ +LC+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + ++ K   LL  M  R ++PN  TYNTLI+G+    K+  A +L   M S G   + V+
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +N LI+ +    + +EAL ++  M +KG+ P+ V+Y  L  GL +  + + A   +  M+
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           RN V     TY   IDGLCK+GF+ EA+ L   +     + +IV+Y+ LI+G
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 189/421 (44%), Gaps = 10/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +F YM+      P   S+ +L   L KN  +D     + R+   G+     T++ +
Sbjct: 391 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G +    V+L  + +    P+ VT+++LI G C   R   A  +  +      
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P+   Y+TLI   CR G    A+ ++E M   G+         +  T+N ++  LCK G
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFNVLVTSLCKAG 562

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+E    M  + I P+ V++  +I G+  + +  +A  +F EM   G  P   T+ 
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK G + +A + L+ +       +T  YNTL+   C +  +  A  LF  M   
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVER 446
             + D  +Y +LI+  C+      A+    E  ++G + P  V Y     G+F+  Q + 
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +   ++M       D  T N  IDG  + G + +  +L   + +     N+ +YN L+ 
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802

Query: 507 G 507
           G
Sbjct: 803 G 803



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 45/457 (9%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            +A  +FD M ++   P   +  ++L G L K  H        K L++     D   ++ L
Sbjct: 601  KAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            +   CK G ++    + G +++    P++ T+TSLI GLC + + +  A LF K      
Sbjct: 660  LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV-IAILFAKEAEARG 718

Query: 209  E--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               P+   Y   ++G+ + G     +   E+M N      +   P+ VT N +IDG  + 
Sbjct: 719  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRM 772

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            G ++K  +L  +M ++N  P++ TY  ++ G+    D + +  L+  ++  G+ PD +T 
Sbjct: 773  GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA-------RK 379
              ++  +C++  ++   ++L+  I RGV  + YT+N LI   C   +I+ A         
Sbjct: 833  HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892

Query: 380  LFVSMESNGC-------------------MHDVV---------SYNTLINWYCKNKDVEE 411
            L +S++ + C                   +H++           Y  LIN  C+  D++ 
Sbjct: 893  LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952

Query: 412  ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            A  +  EM++  I P  V  + +   L +  + + A  L   M +  +     ++   + 
Sbjct: 953  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012

Query: 472  GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              CK+G V+EALEL   + +   +L++VSYN LI GL
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 18/317 (5%)

Query: 209 EPDVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 251
           +P + T + ++  +C T H +V       A ++ +E++  +G+    FG +      C  
Sbjct: 103 QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 161

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N   Y+ +I    +EG +  + E+F  M     NP V T  +++     + +        
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM+ + + PDV TF+++++ LC  G  +K+S L++ M   G  P   TYNT++  YC  
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            +   A +L   M+S G   DV +YN LI+  C++  + +   L  +M  + I P  VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G     +V  A +L +EM    ++ +  T+N  IDG    G   EAL++F  +  
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 492 SKYELNIVSYNCLIDGL 508
                + VSY  L+DGL
Sbjct: 402 KGLTPSEVSYGVLLDGL 418



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 180/451 (39%), Gaps = 79/451 (17%)

Query: 96   YMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            ++  +H  P  V +  +N L   + K+ +    +SLF  +    + PD YT++ LI+  C
Sbjct: 640  FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699

Query: 154  KMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G+     +       R    PN V +T  + G+    +         +       PD+
Sbjct: 700  RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             T N +I+G  R G      +L  EM N NG       PN  TYN ++ G  K   V  +
Sbjct: 760  VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG------GPNLTTYNILLHGYSKRKDVSTS 813

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
              L+  +    I PD +T  S++ G C +N      ++    + +GV+ D  TF++++ +
Sbjct: 814  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873

Query: 333  LCKNGKMDKASRLLELMIW-----------------------------------RGVNPN 357
             C NG+++ A  L+++M                                     +G++P 
Sbjct: 874  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933

Query: 358  TYTYNTLIDGYCLTD-----------------------------------KIDHARKLFV 382
            +  Y  LI+G C                                      K D A  L  
Sbjct: 934  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993

Query: 383  SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             M     +  + S+ TL++  CKN +V EAL L   M + G+K  +V+YN L  GL    
Sbjct: 994  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053

Query: 443  QVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             +  A +L++EM+ +   A+  TY   I GL
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 87   PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
             +EA  +  +ML+M    P ++SF  L     KN +    L L   +++ GL  D+ +++
Sbjct: 985  ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            +LI   C  G ++  F +   +    F  NA T+ +LI+GL A       A +  K
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 216/448 (48%), Gaps = 33/448 (7%)

Query: 87  PNEALCIFDYMLRMH------------------PSPPPVSSFNILFGCL----AKNKHYD 124
           P+ A  IF+ M R+H                  PS P V     +F  +     KNK  +
Sbjct: 151 PHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSE 210

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCF--CKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
            +  L  ++     FPD  +++ +++    C+ G+       L  +L S   P+ +T+ +
Sbjct: 211 AI-GLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNT 269

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           +I G C E ++ +A     K    + +PD+FT N L+ GLC  G    AL LF    +  
Sbjct: 270 IIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKG 329

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                    + VTYNTII GLCKEG  ++A +L  +M+++ + PD  TY +++     A 
Sbjct: 330 KAI------DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAE 383

Query: 303 DWNEAKRLFI-EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              E    F  +M+++  +PD+ T ++++  LC  G +D A +L    I +G   +  TY
Sbjct: 384 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 443

Query: 362 NTLIDGYCLTDKIDHARKLFVSMES-NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           NT+I G C   + + A  L   ME  NG + D  +YNT+I  YC+   VE+A    ++M+
Sbjct: 444 NTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMV 503

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            K  KP + T N L  GL     + +ALKLF+       A D  TYN  I GLCK G   
Sbjct: 504 EKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 563

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EA +L   +++ K   +  +YN ++  L
Sbjct: 564 EAFDLLAEMKEKKLGPDCYTYNAILCAL 591



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 192/393 (48%), Gaps = 24/393 (6%)

Query: 114 FGCLAKNKHYDTVLSLF------------KRLNS---AGLFPDIYTHSILINCFCKMGRV 158
           F C   N  Y+T+L +              +LN    +GL P   T++ +I+ +C+ G+V
Sbjct: 221 FSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQV 280

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
              F    +++   F P+  T   L++GLC E  +  A  LF          D  TYNT+
Sbjct: 281 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTI 340

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC-KEGFVDKAKELFL 277
           I+GLC+ G    A +L  EM     + G    P+  TYN I+  L   EG V+KA +   
Sbjct: 341 ISGLCKEGRFEEAFDLLAEMEEK--KLG----PDCYTYNAILCALADAEGQVEKAFQFRN 394

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           KM +++  PD+ T   ++RG C     + A +LF   + +G   D VT++ I+  LCK G
Sbjct: 395 KMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEG 454

Query: 338 KMDKASRLL-ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           + ++A  LL E+    G+ P+  TYNT+I GYC   +++ A +    M       D+ + 
Sbjct: 455 RFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 514

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N L+   C+   + +AL L++  +SKG     VTYNT+  GL +  + E A  L  EM+ 
Sbjct: 515 NILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKE 574

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
             +  D YTYN  +  L  +G  +EA E    I
Sbjct: 575 KKLGPDCYTYNAILCALADAG-RMEAEEFMSKI 606



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 28/324 (8%)

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           +R   AA +F + +    +P++ T NTLIN L R                         K
Sbjct: 149 NRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVR----------------------YPSK 186

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKE---LFLKMKDENINPDVVTYTSV--IRGFCYANDWN 305
           P+      I   + K G  +K  E   L  KMKD +  PD  +Y ++  +   C +   +
Sbjct: 187 PSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTD 246

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           ++     E+++ G+ P  +T++ I+   C+ G+++KA +    M+ +   P+ +T N L+
Sbjct: 247 QSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILL 306

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G C    +D+A KLF +  S G   D V+YNT+I+  CK    EEA  L +EM  K + 
Sbjct: 307 RGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLG 366

Query: 426 PTVVTYNTLFLGLFEIH-QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           P   TYN +   L +   QVE+A +  ++M       D +T N  + GLC  G +  AL+
Sbjct: 367 PDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK 426

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF         ++ V+YN +I GL
Sbjct: 427 LFNTWISKGKAIDAVTYNTIISGL 450



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 61/207 (29%)

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN-------------------- 401
           +T I  Y   ++  HA ++F  M+      ++++ NTLIN                    
Sbjct: 139 DTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTN 198

Query: 402 ---WYCKNKDVEEALSLYSEM-------------------------------------LS 421
              +  KNK + EA+ L  +M                                     L 
Sbjct: 199 VIKFGVKNK-LSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLE 257

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G+ P  +TYNT+  G     QVE+A +  ++M       D +T N  + GLC  G +  
Sbjct: 258 SGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDN 317

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           AL+LF         ++ V+YN +I GL
Sbjct: 318 ALKLFNTWISKGKAIDAVTYNTIISGL 344


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 33/444 (7%)

Query: 97  MLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           M +M  S   P + ++N +     K   +   + L   + S G+  D+ T+++LI+  C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
             R++ G+++L  + +    PN VT+ +LI G   E +++ A+ L  +   F   P+  T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 215 YNTLINGLCRTGHTIVALNLFEEM-ANG-----------------NGEFGV--------- 247
           +N LI+G    G+   AL +F  M A G                 N EF +         
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 248 ---VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
              VC    +TY  +IDGLCK GF+D+A  L  +M  + I+PD+VTY+++I GFC    +
Sbjct: 396 RNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             AK +   +   G+ P+ + +S ++   C+ G + +A R+ E MI  G   + +T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +   C   K+  A +    M S+G + + VS++ LIN Y  + +  +A S++ EM   G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            PT  TY +L  GL +   +  A K    +     A DT  YN  +  +CKSG + +A+ 
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF  +       +  +Y  LI GL
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGL 658



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++L IF  M  ++   P V + N + G + K+    +V S  K +    + PD+ T +I
Sbjct: 140 QDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  G       ++ ++ +S + P  VT+ +++   C + R   A  L    +   
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + DV TYN LI+ LCR+        L  +M         +  PN VTYNT+I+G   EG
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK------RMIHPNEVTYNTLINGFSNEG 312

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A +L  +M    ++P+ VT+ ++I G     ++ EA ++F  M  +G+ P  V++ 
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCKN + D A      M   GV     TY  +IDG C    +D A  L   M  +
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+V+Y+ LIN +CK    + A  +   +   G+ P  + Y+TL      +  ++ A
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++++ M       D +T+N  +  LCK+G V EA E  R +       N VS++CLI+G
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 207/457 (45%), Gaps = 31/457 (6%)

Query: 83  NLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
           +++   E + ++ ++  M      P V++FNIL   L     ++    L +++  +G  P
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 226

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
            I T++ +++ +CK GR      +L  +       +  T+  LI  LC  +RI +   L 
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 286

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN------------------GN 242
              R     P+  TYNTLING    G  ++A  L  EM +                    
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346

Query: 243 GEFGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           G F    K           P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T +I G C     +EA  L  EM   G+ PD+VT+S +++  CK G+   A  ++  +  
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            G++PN   Y+TLI   C    +  A +++ +M   G   D  ++N L+   CK   V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A      M S GI P  V+++ L  G     +  +A  +FDEM +       +TY + + 
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           GLCK G + EA +  +++      ++ V YN L+  +
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 7/352 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+ S  F  L    R C   N   +  LI+    E  I ++  +F    ++   P V+T 
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N ++  + ++G  +   +  +EM         +C P+  T+N +I+ LC EG  +K+  L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             KM+     P +VTY +V+  +C    +  A  L   M  +GV  DV T+++++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + ++ K   LL  M  R ++PN  TYNTLI+G+    K+  A +L   M S G   + V+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +N LI+ +    + +EAL ++  M +KG+ P+ V+Y  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           RN V     TY   IDGLCK+GF+ EA+ L   +     + +IV+Y+ LI+G
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 189/421 (44%), Gaps = 10/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +F YM+      P   S+ +L   L KN  +D     + R+   G+     T++ +
Sbjct: 351 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G +    V+L  + +    P+ VT+++LI G C   R   A  +  +      
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            P+   Y+TLI   CR G    A+ ++E M   G+         +  T+N ++  LCK G
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFNVLVTSLCKAG 522

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V +A+E    M  + I P+ V++  +I G+  + +  +A  +F EM   G  P   T+ 
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++  LCK G + +A + L+ +       +T  YNTL+   C +  +  A  LF  M   
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVER 446
             + D  +Y +LI+  C+      A+    E  ++G + P  V Y     G+F+  Q + 
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            +   ++M       D  T N  IDG  + G + +  +L   + +     N+ +YN L+ 
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 507 G 507
           G
Sbjct: 763 G 763



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 45/457 (9%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            +A  +FD M ++   P   +  ++L G L K  H        K L++     D   ++ L
Sbjct: 561  KAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            +   CK G ++    + G +++    P++ T+TSLI GLC + + +  A LF K      
Sbjct: 620  LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV-IAILFAKEAEARG 678

Query: 209  E--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               P+   Y   ++G+ + G     +   E+M N      +   P+ VT N +IDG  + 
Sbjct: 679  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRM 732

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            G ++K  +L  +M ++N  P++ TY  ++ G+    D + +  L+  ++  G+ PD +T 
Sbjct: 733  GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA-------RK 379
              ++  +C++  ++   ++L+  I RGV  + YT+N LI   C   +I+ A         
Sbjct: 793  HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852

Query: 380  LFVSMESNGC-------------------MHDVV---------SYNTLINWYCKNKDVEE 411
            L +S++ + C                   +H++           Y  LIN  C+  D++ 
Sbjct: 853  LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912

Query: 412  ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
            A  +  EM++  I P  V  + +   L +  + + A  L   M +  +     ++   + 
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972

Query: 472  GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              CK+G V+EALEL   + +   +L++VSYN LI GL
Sbjct: 973  LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 18/317 (5%)

Query: 209 EPDVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 251
           +P + T + ++  +C T H +V       A ++ +E++  +G+    FG +      C  
Sbjct: 63  QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 121

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N   Y+ +I    +EG +  + E+F  M     NP V T  +++     + +        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM+ + + PDV TF+++++ LC  G  +K+S L++ M   G  P   TYNT++  YC  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            +   A +L   M+S G   DV +YN LI+  C++  + +   L  +M  + I P  VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G     +V  A +L +EM    ++ +  T+N  IDG    G   EAL++F  +  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 492 SKYELNIVSYNCLIDGL 508
                + VSY  L+DGL
Sbjct: 362 KGLTPSEVSYGVLLDGL 378



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 180/451 (39%), Gaps = 79/451 (17%)

Query: 96   YMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            ++  +H  P  V +  +N L   + K+ +    +SLF  +    + PD YT++ LI+  C
Sbjct: 600  FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659

Query: 154  KMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G+     +       R    PN V +T  + G+    +         +       PD+
Sbjct: 660  RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             T N +I+G  R G      +L  EM N NG       PN  TYN ++ G  K   V  +
Sbjct: 720  VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG------GPNLTTYNILLHGYSKRKDVSTS 773

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
              L+  +    I PD +T  S++ G C +N      ++    + +GV+ D  TF++++ +
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 333  LCKNGKMDKASRLLELMIW-----------------------------------RGVNPN 357
             C NG+++ A  L+++M                                     +G++P 
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 358  TYTYNTLIDGYCLTDKI-----------------------------------DHARKLFV 382
            +  Y  LI+G C    I                                   D A  L  
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 383  SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             M     +  + S+ TL++  CKN +V EAL L   M + G+K  +V+YN L  GL    
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 443  QVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             +  A +L++EM+ +   A+  TY   I GL
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 87   PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
             +EA  +  +ML+M    P ++SF  L     KN +    L L   +++ GL  D+ +++
Sbjct: 945  ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            +LI   C  G ++  F +   +    F  NA T+ +LI+GL A       A +  K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 192/390 (49%), Gaps = 7/390 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R H  P  V + N +     +   +     +F  +  AG+ PD  +   L+   C+ G+
Sbjct: 129 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 188

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     +L  + R  F+ +  T T +++ LC + R  + +  F +       P+V  Y  
Sbjct: 189 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTA 248

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            I+GLC+  +   A ++ EEM  G G      KPN  T+ T+IDGLCK G+ ++A  LFL
Sbjct: 249 WIDGLCKRRYVKQAFHVLEEMV-GRG-----LKPNVYTHTTLIDGLCKIGWTERAFRLFL 302

Query: 278 KM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
           K+ K  +  P+V TYT +I G+C       A+ L + M++QG++P+  T++ ++   CK 
Sbjct: 303 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG 362

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G  D+A  L+  M   G  PN YTYN +IDG+C   KI  A K+     S G   D ++Y
Sbjct: 363 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 422

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
             LI  +CK   +  AL L+  M+  G  P +  Y +L     +  Q+E + K FD+   
Sbjct: 423 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 482

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             +     TY + I G CK G    AL +F
Sbjct: 483 IGLLPTKQTYTSMIAGYCKVGRSTMALRVF 512



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 190/371 (51%), Gaps = 6/371 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R    P    SF  L     +    + V +L   +   G   D  T ++++   
Sbjct: 160 VFDGMTRAGVCPDE-RSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 218

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ GR         R+L     PN V +T+ I GLC    + +A  +  +      +P+V
Sbjct: 219 CEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 278

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +T+ TLI+GLC+ G T  A  LF ++   +       KPN  TY  +I G C+EG + +A
Sbjct: 279 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSY-----KPNVHTYTVMIGGYCREGKLARA 333

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           + L ++M ++ + P+  TYT++I G C    ++ A  L  +M  +G  P++ T++ ++D 
Sbjct: 334 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 393

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK GK+ +A ++L +   +G+  +  TY  LI  +C    I +A  LF  M  NGC  D
Sbjct: 394 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 453

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y +LI+ YC+ + +EE+   + + L  G+ PT  TY ++  G  ++ +   AL++F+
Sbjct: 454 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFE 513

Query: 453 EMRRNHVAADT 463
            M +N   AD+
Sbjct: 514 RMVQNGCFADS 524



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 8/302 (2%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F  ML M  +PP V ++      L K ++      + + +   GL P++YTH+ LI+  C
Sbjct: 231 FRRMLEMG-TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 289

Query: 154 KMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           K+G     F +  ++++S  + PN  T+T +I G C E ++  A  L  +      +P+ 
Sbjct: 290 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY TLI G C+ G    A  L  +M     + G +  PN  TYN +IDG CK+G + +A
Sbjct: 350 NTYTTLIGGHCKGGSFDRAFELMNKMK----QEGFL--PNIYTYNAVIDGFCKKGKIQEA 403

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++      + +  D +TYT +I   C       A  LF  M++ G  PD+  ++ ++  
Sbjct: 404 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 463

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+  +M+++ +  +  +  G+ P   TY ++I GYC   +   A ++F  M  NGC  D
Sbjct: 464 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFAD 523

Query: 393 VV 394
            +
Sbjct: 524 SI 525



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 139/298 (46%), Gaps = 7/298 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD  ++  L+   CR G       L   M      +G      T T   ++  LC++G  
Sbjct: 171 PDERSFRALVVVCCREGKVEEVDALLAAMWR----YGFSLDNATCT--VVVRSLCEKGRF 224

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
               E F +M +    P+VV YT+ I G C      +A  +  EM+ +G++P+V T + +
Sbjct: 225 KDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 284

Query: 330 MDELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +D LCK G  ++A RL L+L+      PN +TY  +I GYC   K+  A  L V M   G
Sbjct: 285 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 344

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              +  +Y TLI  +CK    + A  L ++M  +G  P + TYN +  G  +  +++ A 
Sbjct: 345 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 404

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           K+        +  D  TY   I   CK G +  AL+LF  + ++    +I +Y  LI 
Sbjct: 405 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 1/238 (0%)

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A+++F  M    + PD  ++ +++   C      E   L   M   G   D  T +V++ 
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 216

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LC+ G+    S     M+  G  PN   Y   IDG C    +  A  +   M   G   
Sbjct: 217 SLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 276

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           +V ++ TLI+  CK    E A  L+ +++ S   KP V TY  +  G     ++ RA  L
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 336

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              M    +  +T TY   I G CK G    A EL   ++   +  NI +YN +IDG 
Sbjct: 337 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGF 394



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 3/251 (1%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++    + G + +A ++ L+M+   +   V T   V+R       +  A+++F  M   G
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHA 377
           V PD  +F  ++   C+ GK+++   LL  M WR G + +  T   ++   C   +    
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAM-WRYGFSLDNATCTVVVRSLCEKGRFKDV 227

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            + F  M   G   +VV+Y   I+  CK + V++A  +  EM+ +G+KP V T+ TL  G
Sbjct: 228 SEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDG 287

Query: 438 LFEIHQVERALKLFDEM-RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           L +I   ERA +LF ++ + +    + +TY   I G C+ G +  A  L   + +   + 
Sbjct: 288 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 347

Query: 497 NIVSYNCLIDG 507
           N  +Y  LI G
Sbjct: 348 NTNTYTTLIGG 358



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 6/237 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             A  +F  +++     P V ++ ++ G   +         L  R+   GL P+  T++ 
Sbjct: 295 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 354

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   CK G     F ++ ++ +  F PN  T+ ++I G C + +I EA  +        
Sbjct: 355 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 414

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + D  TY  LI   C+ GH   AL+LF+ M   NG     C P+   Y ++I   C++ 
Sbjct: 415 LKFDKITYTILITEHCKQGHITYALDLFDRMVE-NG-----CCPDIEAYTSLISTYCQQR 468

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            ++++++ F K     + P   TYTS+I G+C       A R+F  M+  G   D +
Sbjct: 469 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSI 525



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 73/172 (42%)

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G++ +A+ ++  M   G+     T N ++     T    +ARK+F  M   G   D  S+
Sbjct: 117 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 176

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
             L+   C+   VEE  +L + M   G      T   +   L E  + +   + F  M  
Sbjct: 177 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 236

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                +   Y  +IDGLCK  +V +A  +   +     + N+ ++  LIDGL
Sbjct: 237 MGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 221/447 (49%), Gaps = 30/447 (6%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           ALC+FD M +     P + S N L   L +N      L +++++ + G+ PDI++++I++
Sbjct: 205 ALCVFDNMGKCG-RVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMV 263

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N +CK GRV   F  +  + RSC  PN VT+ SLI G  +   +  A  +          
Sbjct: 264 NAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIP 323

Query: 210 PDVFTYNTLINGLCRTGHT---------IVALNLF-EEMANG------------------ 241
            +  TY  LI G C+ G           ++  NLF +E   G                  
Sbjct: 324 ENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRI 383

Query: 242 -NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
            +    V  K NTV  N++I+G CK G V+KA E+ + MKD N+ PD   Y +++ GFC 
Sbjct: 384 RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCK 443

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
             D+ +A +L  EM ++GV   VVT++ ++  L   G ++ A  +  LM  RGV PN  T
Sbjct: 444 QEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVT 503

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           Y TL+D +      D A  ++    S G    +  YNT+I  +CK + + +A  ++ +M 
Sbjct: 504 YCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMK 563

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G  P  +TY TL  G  ++  +  ALKL D   R+ +++ T  YN+ I G+ +S  + 
Sbjct: 564 ELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQ 623

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           +   L   +++ +   N+V+Y  LI G
Sbjct: 624 KLNGLLAEMKNRELSPNVVTYGSLIAG 650



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 214/439 (48%), Gaps = 45/439 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N L   L    H +  L ++  ++  G+ P+  T+  L++ F K+G      ++  
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
             L   FT +   + ++I G C   ++++A  +F K +     PD  TY TLI+G C+ G
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           + + AL L ++M+  +G        +T  YN++I G+ +   + K   L  +MK+  ++P
Sbjct: 586 NLVEALKL-KDMSERDG-----ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VVTY S+I G+C     ++A   + +M+D+G+ P+++  S I+  L ++GK+D+A+ +L
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 347 ELMIWRGVNP-------------------------------------NTYTYNTLIDGYC 369
             +    ++P                                     N   YN  I G C
Sbjct: 700 HQIA--DIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLC 757

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            +  ID  R++   +   G   D  +Y +LI+       V EA  L  +M++ G+ P +V
Sbjct: 758 KSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIV 817

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            YN L  GL +   ++RA +LF+++ R  ++    TYN  IDG CK G   EALEL   +
Sbjct: 818 VYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877

Query: 490 RDSKYELNIVSYNCLIDGL 508
           R+     + ++Y+ LI GL
Sbjct: 878 REEGICPSSITYSTLIHGL 896



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 11/385 (2%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           +D ++S+++  + +   P ++   +++  F + G       V   + +    P+  +  S
Sbjct: 172 WDELVSVYREFSFS---PTVF--DMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNS 226

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           L+  L       +A  ++ +       PD+F+Y  ++N  C+ G    A N  +EM    
Sbjct: 227 LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS- 285

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                 C+PN VTYN++IDG    G V  AK++   M ++ I  +  TYT +I+G+C   
Sbjct: 286 -----CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRG 340

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              +A++L   MM++ +  D   + V++   C  G++D A R+ + M+  G+  NT   N
Sbjct: 341 QMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICN 400

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +LI+GYC    ++ A ++ VSM+      D   YNTL++ +CK +D  +A  L  EM +K
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G+  TVVTYNTL   LF +  VE AL +++ M +  VA +  TY   +D   K G    A
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
           + +++      +  +I  YN +I G
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICG 545



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F+++    A+       L +F  +   G  P + + + L++   + G      +V  +++
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+  ++T ++   C E R+ EA     +     CEP+V TYN+LI+G    G   
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  +   M+    E G+    N+ TY  +I G CK G +++A++L   M ++N+  D  
Sbjct: 309 GAKKVLALMS----EKGI--PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEH 362

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y  +I  +C A   ++A R+   M+  G++ + V  + +++  CK G ++KA+ +L  M
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSM 422

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
               + P++Y YNTL+DG+C  +    A KL   M + G    VV+YNTL+        V
Sbjct: 423 KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHV 482

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E AL +++ M  +G+ P  VTY TL    F++   +RA+ ++ +            YN  
Sbjct: 483 EHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTM 542

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           I G CK   +++A E+F  +++  +  + ++Y  LIDG
Sbjct: 543 ICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 6/388 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P    ++ +L     K    +    L   +    LF D + + +LI+ +C  GRV     
Sbjct: 323 PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L+     N V   SLI G C    + +AA +    + +  +PD + YNTL++G C
Sbjct: 383 IRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFC 442

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +    I A  L +EM N    F VV      TYNT++  L   G V+ A  ++  M    
Sbjct: 443 KQEDFIKAFKLCDEMHNKGVNFTVV------TYNTLLKNLFHVGHVEHALHIWNLMHKRG 496

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+ VTY +++  F     ++ A  ++ + + +G    +  ++ ++   CK  K+ +A 
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +   M   G  P+  TY TLIDGYC    +  A KL    E +G       YN+LI   
Sbjct: 557 EIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGV 616

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            +++++++   L +EM ++ + P VVTY +L  G  +   +++A   + +M    +A + 
Sbjct: 617 FRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNI 676

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRD 491
              +  +  L + G + EA  +   I D
Sbjct: 677 IIGSKIVSSLYRHGKIDEANLILHQIAD 704



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 176/387 (45%), Gaps = 45/387 (11%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           ++ +N +     K +       +F ++   G  PD  T+  LI+ +CK+G +     +  
Sbjct: 536 ITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD 595

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
              R   + +   + SLI G+     + +   L  + +     P+V TY +LI G C  G
Sbjct: 596 MSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKG 655

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A N + +M +     G+   PN +  + I+  L + G +D+A  +  ++ D  I+P
Sbjct: 656 MMDKAYNAYFKMIDK----GIA--PNIIIGSKIVSSLYRHGKIDEANLILHQIAD--IDP 707

Query: 287 -------------------------------------DVVTYTSVIRGFCYANDWNEAKR 309
                                                + + Y   I G C + + ++ +R
Sbjct: 708 IAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRR 767

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  +++ +G  PD  T+  ++      GK+++A  L + MI  G+ PN   YN LI+G C
Sbjct: 768 ILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLC 827

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            +  +D AR+LF  +   G    VV+YNTLI+ YCK     EAL L  +M  +GI P+ +
Sbjct: 828 KSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSI 887

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRR 456
           TY+TL  GL+   + E+++ L +EM +
Sbjct: 888 TYSTLIHGLYMEGKSEQSVGLLNEMMK 914



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 10/324 (3%)

Query: 187 LCAESRIMEAA--ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           LC  + I  A    L + +R F+  P VF  + ++      G T  AL +F+ M    G+
Sbjct: 161 LCKNNYIASAVWDELVSVYREFSFSPTVF--DMILKVFAEKGMTKFALCVFDNM----GK 214

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
            G V  P+  + N+++  L + G   KA  ++ +M    I PD+ +YT ++  +C     
Sbjct: 215 CGRV--PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRV 272

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           +EA     EM     +P+VVT++ ++D     G +  A ++L LM  +G+  N+ TY  L
Sbjct: 273 DEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLL 332

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I GYC   +++ A KL   M       D   Y  LI+ YC    V++AL +   ML  G+
Sbjct: 333 IKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGL 392

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           K   V  N+L  G  ++  V +A ++   M+  ++  D+Y YN  +DG CK    ++A +
Sbjct: 393 KMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFK 452

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L   + +      +V+YN L+  L
Sbjct: 453 LCDEMHNKGVNFTVVTYNTLLKNL 476



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 150/322 (46%), Gaps = 10/322 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L   + +++    +  L   + +  L P++ T+  LI  +C  G +   +    +++
Sbjct: 609 YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMI 668

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT--LINGLCRTGH 227
                PN +  + ++  L    +I EA  +   H++   +P     ++  L     R   
Sbjct: 669 DKGIAPNIIIGSKIVSSLYRHGKIDEANLIL--HQIADIDPIAAHAHSVELPKSDLRHLE 726

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           T   ++ F + A        +   N + YN  I GLCK   +D  + +   +  +   PD
Sbjct: 727 TQKIVDSFGKKAMS------IPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPD 780

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             TY S+I         NEA  L  +M++ G+ P++V ++ +++ LCK+G +D+A RL  
Sbjct: 781 NYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFN 840

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +  +G++P   TYNTLIDGYC   +   A +L   M   G     ++Y+TLI+      
Sbjct: 841 KLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEG 900

Query: 408 DVEEALSLYSEMLSKGIKPTVV 429
             E+++ L +EM+  G   +V+
Sbjct: 901 KSEQSVGLLNEMMKAGKGSSVM 922


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 196/418 (46%), Gaps = 26/418 (6%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VSSF     CL     Y+   S+ + +   G  PD  T+S ++   C   ++   F++  
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFE 507

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R     +  T+T ++   C    I +A   F + R   C P+V TY  LI+   +  
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM------- 279
               A  LFE M +        C PN VTY+ +IDG CK G ++KA ++F +M       
Sbjct: 568 KVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVP 621

Query: 280 ----------KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
                      D +  P+VV Y +++ GFC  +   EA++L   M  +G +P+ + +  +
Sbjct: 622 DVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDAL 681

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D LCK GK+D+A  +   M   G     YTY++LID Y    + D A K+   M  N C
Sbjct: 682 IDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 741

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +VV Y  +I+  CK    +EA  L   M  KG +P VVTY  +  G   I ++E  L+
Sbjct: 742 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLE 801

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L + M    VA +  TY   ID  CK+G +  A  L   ++ + +  +   Y  +I+G
Sbjct: 802 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEG 859



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 190/415 (45%), Gaps = 13/415 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+++ + G L      +    LF+ +   GL  D+YT++I+++ FCK G +      
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +     TPN VT+T+LI       ++  A  LF       C P++ TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------KPNTVTYNTIIDGLCKEGFVDKAK 273
            G    A  +FE M        V             +PN V Y  ++DG CK   V++A+
Sbjct: 601 AGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEAR 660

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +L   M  E   P+ + Y ++I G C     +EA+ +  EM + G    + T+S ++D  
Sbjct: 661 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRY 720

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K  + D AS++L  M+     PN   Y  +IDG C   K D A KL   ME  GC  +V
Sbjct: 721 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 780

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+ + +   +E  L L   M SKG+ P  VTY  L     +   ++ A  L +E
Sbjct: 781 VTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 840

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M++ H       Y   I+G  K    +E+L L   I        +  Y  L+D L
Sbjct: 841 MKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSLYRLLVDNL 893



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 219/475 (46%), Gaps = 68/475 (14%)

Query: 94  FDYMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D++ RM  +   P  V+   +L GCL K K       +   +   G +P     + L++
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE----------------SRIM 194
            +C  G  S+ + +L ++++   TP  V +  LI  +C +                S ++
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEML 440

Query: 195 EAAALFTKHRVFA-----CE--------------------PDVFTYNTLINGLCRTGHTI 229
               +  K  V +     C                     PD  TY+ ++  LC      
Sbjct: 441 ATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           +A  LFEEM  G    G+V   +  TY  ++D  CK G +++A++ F +M++    P+VV
Sbjct: 501 LAFLLFEEMKRG----GLV--ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYT++I  +  A   + A  LF  M+ +G  P++VT+S ++D  CK G+M+KA ++ E M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM 614

Query: 350 IW-----------------RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
                                  PN   Y  L+DG+C   +++ ARKL  +M   GC  +
Sbjct: 615 CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPN 674

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + Y+ LI+  CK   ++EA  + +EM   G   T+ TY++L    F++ + + A K+  
Sbjct: 675 QIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +M  N  A +   Y   IDGLCK G   EA +L + + +   + N+V+Y  +IDG
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 789



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 197/462 (42%), Gaps = 67/462 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++N L     K    D+   + + ++ A L  D +T        CK+G+      +
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
           +       F P+ V +T LI GLC  S   EA     + R  +C P+V TY         
Sbjct: 293 MET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                     N+L++  C +G    A  L ++M           
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------ 403

Query: 250 KPNTVTYNTIIDGLCKEG------FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
            P  V YN +I  +C +        ++ A++ + +M    +  + +  +S  R  C A  
Sbjct: 404 TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK 463

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
           + +A  +  EM+ QG  PD  T+S ++  LC   KM+ A  L E M   G+  + YTY  
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           ++D +C    I+ ARK F  M   GC  +VV+Y  LI+ Y K K V  A  L+  MLS+G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTY---------------TY 466
             P +VTY+ L  G  +  Q+E+A ++F+ M   ++    D Y                Y
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIY 643

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +DG CK   V EA +L  A+     E N + Y+ LIDGL
Sbjct: 644 GALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 685



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 179/429 (41%), Gaps = 81/429 (18%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K K       LF+ + S G  P+I T+S LI+  CK G++     +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQI 610

Query: 165 LGRILRS-----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
             R+  S                    PN V + +L+ G C   R+ EA  L     +  
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEG 670

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFGV------- 247
           CEP+   Y+ LI+GLC+ G    A  +  EM+               +  F V       
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 730

Query: 248 ---------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                     C PN V Y  +IDGLCK G  D+A +L   M+++   P+VVTYT++I GF
Sbjct: 731 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM--------- 349
                      L   M  +GV P+ VT+ V++D  CKNG +D A  LLE M         
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHA 850

Query: 350 -----IWRGVN-------------------PNTYTYNTLIDGYCLTDKIDHARKLF--VS 383
                +  G N                   P    Y  L+D      +++ A +L   V+
Sbjct: 851 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVA 910

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
             S   +    +YN+LI   C    V++A  L+SEM  KG+ P + T+ +L  GLF   +
Sbjct: 911 TFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSK 970

Query: 444 VERALKLFD 452
           +  AL L D
Sbjct: 971 ISEALLLLD 979



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 195/434 (44%), Gaps = 36/434 (8%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKH----YDTVLSLFKRLNSAGLFPDIYTH------- 145
           +LR+   P  V SF +  G     KH    Y+ ++ L  R +   +  ++          
Sbjct: 138 VLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKE 197

Query: 146 ------SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
                 ++L+  +C+ G  S     LGR+    F P+  T+  LI+    ++  +++A+L
Sbjct: 198 VFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF-LKADCLDSASL 256

Query: 200 FTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
             +    A    D FT       LC+ G    AL L E        F     P+TV Y  
Sbjct: 257 VHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLME-----TENF----VPDTVFYTK 307

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I GLC+    ++A +   +M+  +  P+VVTY++++ G          KR+   MM +G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK----- 373
             P    F+ ++   C +G    A +LL+ M+  G  P    YN LI   C  DK     
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSIC-GDKDSLSC 426

Query: 374 --IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
             ++ A K +  M + G + + ++ ++     C     E+A S+  EM+ +G  P   TY
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           + +   L    ++E A  LF+EM+R  + AD YTY   +D  CK+G + +A + F  +R+
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 492 SKYELNIVSYNCLI 505
                N+V+Y  LI
Sbjct: 547 VGCTPNVVTYTALI 560



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 153/330 (46%), Gaps = 11/330 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA  + D M  M    P    ++ L   L K    D    +   ++  G    +YT+S 
Sbjct: 657 EEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ + K+ R      VL ++L +   PN V +T +I GLC   +  EA  L        
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+V TY  +I+G  R G     L L E M    G  GV   PN VTY  +ID  CK G
Sbjct: 776 CQPNVVTYTAMIDGFGRIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNG 829

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  L  +MK  +       Y  VI GF    ++ E+  L  E+      P +  + 
Sbjct: 830 ALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYR 887

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTY--TYNTLIDGYCLTDKIDHARKLFVSME 385
           +++D L K  +++ A RLLE +         Y  TYN+LI+  CL +K+D A +LF  M 
Sbjct: 888 LLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMS 947

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             G + ++ ++ +LI    +N  + EAL L
Sbjct: 948 KKGVIPEMQTFCSLIKGLFRNSKISEALLL 977



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 3/259 (1%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K  +  YN ++D + ++      +EL  +++D++          ++R +C +  ++ A  
Sbjct: 162 KHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALE 221

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
               + D   +P   T++ ++    K   +D AS +   M    +  + +T        C
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLC 281

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K+   R+    ME+   + D V Y  LI+  C+    EEA+   + M +    P VV
Sbjct: 282 ---KVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+TL  G     Q+ R  ++ + M           +N+ +   C SG    A +L + +
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 490 RDSKYELNIVSYNCLIDGL 508
               +    V YN LI  +
Sbjct: 399 VKCGHTPGYVVYNILIGSI 417


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 212/456 (46%), Gaps = 46/456 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F+ + +    P   +  +++ G   +N+  D    +F R+   G  P+  T+S 
Sbjct: 214 QEAVLVFNKIFQFDLCPDAFTYTSLILG-HCRNRKLDKAFEVFDRMVKDGCNPNSVTYST 272

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  GR+     +L  +      P   T+T  I  LC   R+ +A  L        
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P V TY  +I+GL R G   +A+ ++ +M       G+V  PNTVTYN +I+ LC EG
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE----GLV--PNTVTYNALINELCTEG 386

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
               A ++F  M+      +  TY  +I+G    +D  +A  +F +M+  G  P VVT++
Sbjct: 387 RFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYN 446

Query: 328 VIMDE-----------------------------------LCKNGKMDKASRLLELMIWR 352
            ++ E                                    CK GK+D A+     M+  
Sbjct: 447 TLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC 506

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G++PN +TY  +IDGYC   KID A  LF  ME NGC   + +YN +I+   K     EA
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
               ++M  +G++P  +TY +L  GL +      A K+F EM + +   + +TY + I G
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYG 626

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LC+ G V  A  L     ++  E  I +Y+ L+ GL
Sbjct: 627 LCQEGKVDAAERL----TENGCEPTIDTYSTLVSGL 658



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 41/435 (9%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           SFN L   L K     +  +++ ++ S+G+ P + T + +IN  CK G+V    +V  +I
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +    P+A T+TSLI G C   ++ +A  +F +     C P+  TY+TLINGLC  G  
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+++ EEM     E G+  +P   TY   I  LC  G VD A  L   M  +  +P V
Sbjct: 284 GEAMDMLEEMT----EKGI--EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TYT++I G   A     A  ++ +M+ +G+ P+ VT++ +++ELC  G+   A ++ + 
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT---------- 398
           M   G   N  TYN +I G    D I+ A  +F  M  +G    VV+YNT          
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 399 -------------------------LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
                                    LI+ +CK   ++ A S + EML  GI P   TY  
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G  +  +++ AL LF+ M  N  +A   TYN  I GL K     EA +    + +  
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 494 YELNIVSYNCLIDGL 508
            + N ++Y  LI+GL
Sbjct: 578 LQPNTITYTSLINGL 592



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 201/411 (48%), Gaps = 42/411 (10%)

Query: 134 NSAGLFP-DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           + +GLF   +Y+ + L+    K   V+    V  +I  S   P+ +TF ++I  LC + +
Sbjct: 153 SDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGK 212

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA  +F K   F   PD FTY +LI G CR      A  +F+ M          C PN
Sbjct: 213 VQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG------CNPN 266

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
           +VTY+T+I+GLC EG + +A ++  +M ++ I P V TYT  I   C     ++A  L  
Sbjct: 267 SVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVR 326

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M  +G  P V T++ I+  L + GKM+ A  +   M+  G+ PNT TYN LI+  C   
Sbjct: 327 SMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEG 386

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +   A K+F  ME +G + +  +YN +I       D+E+A+ ++++ML  G  PTVVTYN
Sbjct: 387 RFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYN 446

Query: 433 TLFL-----------------------------------GLFEIHQVERALKLFDEMRRN 457
           TL +                                   G  +  +++ A   F EM + 
Sbjct: 447 TLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC 506

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++ + +TY   IDG CK G +  AL LF  + ++    +I +YN +I GL
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL 557



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 206/419 (49%), Gaps = 11/419 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ ++  ML+    P  V+ +N L   L     +   L +F  +   G   +  T++ +I
Sbjct: 356 AIGMYHKMLKEGLVPNTVT-YNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII 414

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
                M  +    VV  ++L+   +P  VT+ +LI        +  A       +   CE
Sbjct: 415 KGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCE 474

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD  TY  LI+G C+ G    A + F EM     + G+   PN  TY  +IDG CKEG +
Sbjct: 475 PDERTYCELISGFCKGGKLDSATSFFYEML----KCGI--SPNQWTYTAMIDGYCKEGKI 528

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D A  LF +M++   +  + TY ++I G    N ++EA++   +M +QG+QP+ +T++ +
Sbjct: 529 DVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSL 588

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ LCKN   + A ++   M  +   PN +TY +LI G C   K+D A +L      NGC
Sbjct: 589 INGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGC 644

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              + +Y+TL++  C+     EA  L   M  KG+ P++  Y +L +   +  +V+ AL+
Sbjct: 645 EPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALE 704

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +F+ M         + Y   I  LC      EAL +F+++   ++  +++ +  L+DGL
Sbjct: 705 IFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGL 763



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 198/433 (45%), Gaps = 34/433 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD M++   +P  V+ ++ L   L         + + + +   G+ P +YT+++
Sbjct: 249 DKAFEVFDRMVKDGCNPNSVT-YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I+  C +GRV     ++  + +   +P+  T+T++I GL    ++  A  ++ K     
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM------ANGN-------GEFGV------- 247
             P+  TYN LIN LC  G   +AL +F+ M      AN         G FG+       
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427

Query: 248 ---------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                       P  VTYNT+I    K G+++ A      MK+ N  PD  TY  +I GF
Sbjct: 428 VVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C     + A   F EM+  G+ P+  T++ ++D  CK GK+D A  L E M   G + + 
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASI 547

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN +I G    ++   A K    M   G   + ++Y +LIN  CKN     A  ++ E
Sbjct: 548 ETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M  K   P   TY +L  GL +  +V+ A    + +  N       TY+  + GLC+ G 
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGR 663

Query: 479 VLEALELFRAIRD 491
             EA +L   +++
Sbjct: 664 SNEASQLVENMKE 676



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 193/389 (49%), Gaps = 11/389 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +F+ ML+  PSP  V ++N L     K  + +        +  +   PD  T+  L
Sbjct: 425 KAMVVFNKMLKDGPSPT-VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ FCK G++         +L+   +PN  T+T++I G C E +I  A +LF +     C
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
              + TYN +I+GL +      A     +M     E G+  +PNT+TY ++I+GLCK   
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMT----EQGL--QPNTITYTSLINGLCKNTA 597

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            + A ++F +M+ +N  P+  TYTS+I G C     + A+RL     + G +P + T+S 
Sbjct: 598 TNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYST 653

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC+ G+ ++AS+L+E M  +G++P+   Y +L+  +C + K+D A ++F  M   G
Sbjct: 654 LVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKG 713

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               +  Y  LI   C     EEAL+++  +L K     ++ +  L  GL +    +  +
Sbjct: 714 FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCM 773

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           K    M   +     +TY      L K G
Sbjct: 774 KFLYLMESRNCTPSLHTYIILARELSKVG 802



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 11/309 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A   F  ML+   SP   + +  +     K    D  LSLF+R+   G    I T++ 
Sbjct: 494 DSATSFFYEMLKCGISPNQWT-YTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+   K  R S       ++      PN +T+TSLI GLC  +    A  +F +     
Sbjct: 553 IISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TY +LI GLC+ G    A  L E     NG     C+P   TY+T++ GLC+EG
Sbjct: 613 CLPNAHTYTSLIYGLCQEGKVDAAERLTE-----NG-----CEPTIDTYSTLVSGLCREG 662

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A +L   MK++ ++P +  Y S++   C +   + A  +F  M  +G QP +  + 
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++  LC   + ++A  + + ++ +  N +   +  L+DG       D   K    MES 
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782

Query: 388 GCMHDVVSY 396
            C   + +Y
Sbjct: 783 NCTPSLHTY 791



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 34/278 (12%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +F+ M   +     + ++N +   L+K   +        ++   GL P+  T++ LI
Sbjct: 531 ALSLFERM-EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLI 589

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N  CK    +  F +   + +    PNA T+TSLI GLC E ++ +AA   T++    CE
Sbjct: 590 NGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV-DAAERLTEN---GCE 645

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGN----------------GEFGVVC---- 249
           P + TY+TL++GLCR G +  A  L E M                        V C    
Sbjct: 646 PTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEI 705

Query: 250 ---------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                    +P+   Y  +I  LC     ++A  +F  +  +  N D++ +T ++ G   
Sbjct: 706 FNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQ 765

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
             D +   +    M  +   P + T+ ++  EL K GK
Sbjct: 766 EGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 110/210 (52%), Gaps = 16/210 (7%)

Query: 311 FIEMMDQGVQPDVVT----FSVIMDELCKNGKMDKASRLLELMIWRGVNPNT-------- 358
           F+ M+++ V+  ++       ++M + C+N   D+  R+ + +   G++ +         
Sbjct: 107 FVSMLNRLVKDKILAPADHVRILMIKACRNE--DELKRVTDFL--HGISSSDSGLFGFTL 162

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           Y++NTL+      D +  A+ ++  + S+G    ++++NT+IN  CK   V+EA+ ++++
Sbjct: 163 YSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +    + P   TY +L LG     ++++A ++FD M ++    ++ TY+  I+GLC  G 
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + EA+++   + +   E  + +Y   I  L
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSL 312


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 205/400 (51%), Gaps = 8/400 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNIL-FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +FD M  +    P  SS+ ++  GC    K  +    L   +   G  PD  T ++++  
Sbjct: 204 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 261

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            C+ G V+       +++   F PN + FTSLI GLC +  I +A  +  +      +P+
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V+T+  LI+GLC+ G T  A  LF ++   +       KPN  TY ++I G CKE  +++
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNR 376

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A+ LF +MK++ + P+V TYT++I G C A  +  A  L   M D+G  P++ T++  +D
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LCK  +  +A  LL      G+  +  TY  LI   C  + I+ A   F  M   G   
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+   N LI  +C+ K ++E+  L+  ++S G+ PT  TY ++     +   ++ ALK F
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             M+R+    D++TY + I GLCK   V EA +L+ A+ D
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 596



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 8/348 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F  M+ +   P  ++ F  L   L K         + + +   G  P++YTH+ 
Sbjct: 269 NRAIWYFRKMIDLGFKPNLIN-FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327

Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           LI+  CK G     F +  +++RS  + PN  T+TS+I G C E ++  A  LF++ +  
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+V TY TLING C+ G    +     E+ N  G+ G +  PN  TYN  ID LCK+
Sbjct: 388 GLFPNVNTYTTLINGHCKAG----SFGRAYELMNLMGDEGFM--PNIYTYNAAIDSLCKK 441

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
               +A EL  K     +  D VTYT +I+  C  ND N+A   F  M   G + D+   
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++   C+  KM ++ RL +L++  G+ P   TY ++I  YC    ID A K F +M+ 
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           +GC+ D  +Y +LI+  CK   V+EA  LY  M+ +G+ P  VT  TL
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 170/355 (47%), Gaps = 7/355 (1%)

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           F ++GR++    ++  +     TP+++T   +++       I  A  +F +  V    PD
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             +Y  ++ G  R G    A    +    G  + G +  P+  T   I+  LC+ G V++
Sbjct: 217 SSSYKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENGLVNR 270

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A   F KM D    P+++ +TS+I G C      +A  +  EM+  G +P+V T + ++D
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330

Query: 332 ELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
            LCK G  +KA RL L+L+      PN +TY ++I GYC  DK++ A  LF  M+  G  
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V +Y TLIN +CK      A  L + M  +G  P + TYN     L +  +   A +L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            ++     + AD  TY   I   CK   + +AL  F  +  + +E ++   N LI
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 165/355 (46%), Gaps = 19/355 (5%)

Query: 173 FTPNAVTF---TSLIKGLCAESRIMEA------AALFTKHRVFACEPDVFTYNTLINGLC 223
           F  N++T     +++  L +ES  M A      A  F K R F     V   + L NG  
Sbjct: 84  FDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNL 143

Query: 224 RTGHTIVALNL--FEEMANGNGEFGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKE 274
           +  H ++   L  F E+   N   G+V         P+++T N +++   + G ++ A+ 
Sbjct: 144 QKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN 203

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           +F +M    + PD  +Y  ++ G        EA R    M+ +G  PD  T ++I+  LC
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           +NG +++A      MI  G  PN   + +LIDG C    I  A ++   M  NG   +V 
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323

Query: 395 SYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++  LI+  CK    E+A  L+ +++ S   KP V TY ++  G  +  ++ RA  LF  
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M+   +  +  TY   I+G CK+G    A EL   + D  +  NI +YN  ID L
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 10/379 (2%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF  +   G   + Y+++ILI   C    V    V+   + R   +PN   FT LI GLC
Sbjct: 125 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 184

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R+ +A  LF         P V TYN +I G  + G    AL + +E+   NG     
Sbjct: 185 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG----- 238

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+  TYNT+I GLC +   ++A+EL      E   P VVT+T++I G+C A  +++A 
Sbjct: 239 CHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 297

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           R+  +MM    + D+  F  +++ L K  ++ +A  LL  +   G+ PN  TY ++IDGY
Sbjct: 298 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 357

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C + K+D A ++   ME +GC  +  +YN+L+    K+K + +A++L ++M   GI P V
Sbjct: 358 CKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV 417

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +TY TL  G  + H  + A +LF+ M +N +  D + Y    D LCK+G    A E +  
Sbjct: 418 ITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSF 474

Query: 489 IRDSKYELNIVSYNCLIDG 507
           I      L  V Y  LIDG
Sbjct: 475 IVRKGVALTKVYYTTLIDG 493



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 224/470 (47%), Gaps = 56/470 (11%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           CKS   GD  L+        FD M + +   P V ++N +    +K    +  L + + +
Sbjct: 184 CKSGRVGDARLL--------FDAMPQ-NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 234

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC----- 188
              G  PD +T++ LI   C   +      +L   ++  FTP  VTFT+LI G C     
Sbjct: 235 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 293

Query: 189 ------------------------------AESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                                          + R+ EA  L  +       P+V TY ++
Sbjct: 294 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 353

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I+G C++G   +AL + + M          C+PN  TYN+++ GL K+  + KA  L  K
Sbjct: 354 IDGYCKSGKVDIALEVLKMMERDG------CQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNG 337
           M+ + I P+V+TYT++++G C  +D++ A RLF EMM+Q G++PD   ++V+ D LCK G
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EMMEQNGLKPDEHAYAVLTDALCKAG 466

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           + ++A      ++ +GV      Y TLIDG+      D A  L   M   GC  D  +Y+
Sbjct: 467 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            L++  CK K + EAL +  +M  +GIK T+  Y  L   +    + + A ++++EM  +
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                  TY  FI+  CK G + +A +L   +       ++V+YN LIDG
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 185/392 (47%), Gaps = 15/392 (3%)

Query: 94  FDYMLRMH------PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           FD  LRM            +  F  L   L K         L   +++ GL P++ T++ 
Sbjct: 293 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 352

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ +CK G+V     VL  + R    PNA T+ SL+ GL  + ++ +A AL TK +   
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY TL+ G C       A  LFE M   NG      KP+   Y  + D LCK G
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEHAYAVLTDALCKAG 466

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A    ++   + +    V YT++I GF  A + + A  L   M+D+G  PD  T+S
Sbjct: 467 RAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++  LCK  ++++A  +L+ M  RG+    + Y  LID      K DHA++++  M S+
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G      +Y   IN YCK   +E+A  L  +M  +G+ P VVTYN L  G   +  ++RA
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
                 M       + +TY   +  L K    
Sbjct: 644 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 675



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 180/354 (50%), Gaps = 13/354 (3%)

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
           MGRV    V  G +      P+ VT+ ++IK  C E  +  A   F        EP+ FT
Sbjct: 52  MGRVYSQLVQDGLL------PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFT 105

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
            N L+ G CRTG    A  LF  M        + C+ N  +Y  +I GLC    V KA  
Sbjct: 106 CNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYTILIQGLCDAKCVRKALV 159

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           LFL MK +  +P+V  +T +I G C +    +A+ LF  M   GV P V+T++ ++    
Sbjct: 160 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 219

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G+M+ A ++ ELM   G +P+ +TYNTLI G C   K + A +L  +    G    VV
Sbjct: 220 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 278

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           ++  LIN YC  +  ++AL + ++M+S   K  +  +  L   L +  +++ A +L +E+
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             N +  +  TY + IDG CKSG V  ALE+ + +     + N  +YN L+ GL
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 392



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 196/445 (44%), Gaps = 45/445 (10%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R+  SP     +N     LA+    + +  ++ +L   GL PD  T++ +I  +CK G +
Sbjct: 28  RLALSP---KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDL 84

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           +        +L     P   T  +L+ G C    + +A  LF    +  C+ + ++Y  L
Sbjct: 85  TTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTIL 144

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I GLC       AL LF  M          C PN   +  +I GLCK G V  A+ LF  
Sbjct: 145 IQGLCDAKCVRKALVLFLMMKRDG------CSPNVRAFTFLISGLCKSGRVGDARLLFDA 198

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M    + P V+TY ++I G+      N+A ++   M   G  PD  T++ ++  LC + K
Sbjct: 199 MPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQK 257

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID----------------------- 375
            ++A  LL   +  G  P   T+  LI+GYC+ +K D                       
Sbjct: 258 TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 317

Query: 376 ------------HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
                        A++L   + +NG + +V++Y ++I+ YCK+  V+ AL +   M   G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P   TYN+L  GL +  ++ +A+ L  +M+++ +  +  TY   + G C       A 
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            LF  +  +  + +  +Y  L D L
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDAL 462



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 184/423 (43%), Gaps = 54/423 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV--SHGF 162
           P V ++  L         +D    LF+ +   GL PD + +++L +  CK GR   ++ F
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474

Query: 163 VV------------------------------LGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +V                              + R++    TP++ T++ L+  LC + R
Sbjct: 475 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA  +  +  +   +  +F Y  LI+ + R G    A  ++ EM +         KP+
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPS 588

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
             TY   I+  CKEG ++ A++L LKM+ E + PDVVTY  +I G  +    + A     
Sbjct: 589 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 648

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNG----------------KMDKASRLLELMIWRGVNP 356
            M+    +P+  T+ +++  L K                  ++D   +LLE M+  G+NP
Sbjct: 649 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 708

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
              TY++LI G+C   +++ A  L   M   G   +   Y  LI   C  K  E+ALS  
Sbjct: 709 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 768

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           S M   G +P + +Y  L +GL      E+   LF ++       D   +    DGL K+
Sbjct: 769 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 828

Query: 477 GFV 479
           G+V
Sbjct: 829 GYV 831



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 15/326 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL I D M  +      + ++ IL   + +   +D    ++  + S+G  P   T+++
Sbjct: 536 NEALPILDQM-SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 594

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            IN +CK GR+     ++ ++ R    P+ VT+  LI G      I  A +   +    +
Sbjct: 595 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 654

Query: 208 CEPDVFTYNTLINGL-------CRTGHTIVALNLFE-----EMANGNGEFGVVCKPNTVT 255
           CEP+ +TY  L+  L        R+  T    NL E     ++     + G+   P   T
Sbjct: 655 CEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL--NPTVTT 712

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+++I G CK G +++A  L   M  + ++P+   YT +I+  C    + +A      M 
Sbjct: 713 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS 772

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G QP + ++ +++  LC  G  +K   L   ++  G N +   +  L DG      +D
Sbjct: 773 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 832

Query: 376 HARKLFVSMESNGCMHDVVSYNTLIN 401
              ++   ME   C     +Y  + N
Sbjct: 833 ICFQMLSIMEKRYCCISSQTYALVTN 858


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 202/402 (50%), Gaps = 7/402 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S++N+L   L +  H+D V  +F  + S G  PD      L+    +         +L  
Sbjct: 74  STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +       N+  + +L+  L  ++++ EA  LF ++ V    PD +T+N LI GLCR G 
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-NINP 286
              A  +F++M +    FG  C P+ VTYNT+I+GLCK   V +  ELF +++   + +P
Sbjct: 194 VDRAFEVFKDMES----FG--CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D+VTYTS+I GFC +    EA  LF EMM  G+QP+V+TF+V++D   K G + +A  + 
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M +   + +  T+ +LIDGYC   +++H  K +  M++      V +Y  LIN  CK 
Sbjct: 308 RKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + EA     ++ +  I P    YN +  G  +   V+    +  EM       D  T+
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTF 427

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I G C  G + EA+ +F  +  ++   + ++ N LI  L
Sbjct: 428 TILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCL 469



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 188/393 (47%), Gaps = 6/393 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FDYM       P       L   +A+   +D V  L   +    +  + + ++ L++  
Sbjct: 95  VFDYM-GSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVL 153

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K  +V     +    L     P+  TF  LI+GLC    +  A  +F     F C PDV
Sbjct: 154 VKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDV 213

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNTLINGLC+         LF+E+ + +      C P+ VTY +II G CK G + +A
Sbjct: 214 VTYNTLINGLCKANEVQRGCELFKEIQSRSD-----CSPDIVTYTSIISGFCKSGKMKEA 268

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF +M    I P+V+T+  +I GF    +  EA+ ++ +M       DVVTF+ ++D 
Sbjct: 269 SNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDG 328

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+ G+++   +   +M  R V+P  YTY  LI+  C  ++++ AR     ++++  +  
Sbjct: 329 YCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPK 388

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
              YN +I+ +CK  +V+E   +  EM  K   P  VT+  L +G     ++  A+ +F+
Sbjct: 389 PFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFN 448

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            M     A D  T N+ I  L K+G   EA  +
Sbjct: 449 RMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 142/328 (43%), Gaps = 66/328 (20%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNIL----------------------FGCLAKNKHYDT 125
           +EA+ +F   L M  SPP   +FNIL                      FGCL     Y+T
Sbjct: 160 HEAIYLFKEYLVMQ-SPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNT 218

Query: 126 VLS-------------LFKRLNS-AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           +++             LFK + S +   PDI T++ +I+ FCK G++     +   ++RS
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
              PN +TF  LI G      I EA A++ K   F C  DV T+ +LI+G CR G     
Sbjct: 279 GIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHG 338

Query: 232 LNLFEEMANGNGE---------FGVVCK--------------------PNTVTYNTIIDG 262
           L  +  M   N              +CK                    P    YN +IDG
Sbjct: 339 LKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDG 398

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            CK G VD+   +  +M+++  +PD VT+T +I G C      EA  +F  M+     PD
Sbjct: 399 FCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPD 458

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMI 350
            +T + ++  L K G  ++A R+ ++ +
Sbjct: 459 NITVNSLISCLLKAGMPNEAYRIRKMAL 486



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+N    TY  ++R  C     +    +F  M   G  PD      ++  + +    D  
Sbjct: 68  NVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +LL  +  + V  N++ YN L+      +++  A  LF          D  ++N LI  
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRG 187

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAA 461
            C+   V+ A  ++ +M S G  P VVTYNTL  GL + ++V+R  +LF E++ R+  + 
Sbjct: 188 LCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TY + I G CKSG + EA  LF  +  S  + N++++N LIDG 
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGF 294


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++NI+   L K    D   SL   + + G+ P++ +++ +I   C+ G +     V   +
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L     PN VT++ LI G   +    +A  LF +       P  FT+NT+INGLC+ G  
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A +  +       E G +  P+ +TYN+I+DG  KEG +D A  ++ +M +  ++P+V
Sbjct: 591 SEARDKLKNFL----EEGFI--PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 644

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYTS+I GFC +N  + A +   EM ++G++ DV  +S ++D  CK   M+ A  L   
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 704

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G++PN   YN++I G+   + ++ A   +  M ++    D+ +Y TLI+   K   
Sbjct: 705 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 764

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  A  LY EMLSKGI P ++T++ L  GL    Q+E A K+ +EM R ++      YN 
Sbjct: 765 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 824

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G  + G + EA  L   + D     + V+Y+ LI+G
Sbjct: 825 LIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 209/419 (49%), Gaps = 40/419 (9%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D+ L+LF ++   GLFP+  T+S+LI   C  G +     +  ++  +   P+     SL
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 184 IKG----------------------------------LCAESRIMEAAALFTKHRVFACE 209
           ++G                                  LC   ++ EA +L          
Sbjct: 442 LRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 501

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V +YN +I G CR G+  +A ++F +M   +       KPN VTY+ +IDG  K+G  
Sbjct: 502 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARD------LKPNVVTYSILIDGNFKKGDS 555

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +KA +LF +M   NI P   T+ ++I G C     +EA+      +++G  P  +T++ I
Sbjct: 556 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 615

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K G +D A  +   M   GV+PN  TY +LI+G+C +++ID A K    M   G 
Sbjct: 616 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 675

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DV +Y+ LI+ +CK +D+E A  L+ E+L  G+ P  + YN++  G  +++ +E AL 
Sbjct: 676 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 735

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + +M  + +  D  TY   IDGL K G ++ A +L+  +       +I++++ L++GL
Sbjct: 736 WYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 794



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 192/385 (49%), Gaps = 7/385 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M+     P  VS  +++ G   K  + D   S+F  + +  L P++ T+SI
Sbjct: 486 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKG-NMDMASSVFSDMLARDLKPNVVTYSI 544

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K G       +  ++L     P   TF ++I GLC   ++ EA           
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   TYN++++G  + G+   AL ++ EM     EFGV   PN VTY ++I+G CK  
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMC----EFGV--SPNVVTYTSLINGFCKSN 658

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +   +M+++ +  DV  Y+++I GFC   D   A+ LF E+++ G+ P+ + ++
Sbjct: 659 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 718

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++        M+ A    + MI   +  +  TY TLIDG     ++  A  L++ M S 
Sbjct: 719 SMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 778

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+++++ L+N  C    +E A  +  EM  K + P+V+ YNTL  G F    ++ A
Sbjct: 779 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 838

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDG 472
             L DEM    +  D  TY+  I+G
Sbjct: 839 FTLHDEMLDRGLVPDDVTYDILING 863



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 183/431 (42%), Gaps = 29/431 (6%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGR 157
           ++H    P+S  +++   L       + L  FKR  +  G    +  + +L++   +   
Sbjct: 90  QIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPE 149

Query: 158 V-SHGFVVLGRILRSCFTPNAVTFTS--------------------LIKGLCAESRIMEA 196
              H   +L R +     P+ V F                      L+      +RI  A
Sbjct: 150 THGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENA 209

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
              F         P V   N L+  L R        +L+ +M    G +G     +  T 
Sbjct: 210 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV-LRGIYG-----DHFTV 263

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + ++    KEG V++A+E F + K+  +  D   Y+ +I+  C   + N    L  EM +
Sbjct: 264 HVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKE 323

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G  P   TF+ ++      G M +A RL E MI  G   N     +L+ GYC    +D 
Sbjct: 324 RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 383

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  LF  +  +G   + V+Y+ LI   C + ++E+A  LY++M   GI P+V   N+L  
Sbjct: 384 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 443

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  +    E A KLFDE     V A+ +TYN  +  LCK G + EA  L   + +     
Sbjct: 444 GYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 502

Query: 497 NIVSYNCLIDG 507
           N+VSYN +I G
Sbjct: 503 NVVSYNDMILG 513


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 205/400 (51%), Gaps = 8/400 (2%)

Query: 93   IFDYMLRMHPSPPPVSSFNIL-FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
            +FD M  +    P  SS+ ++  GC    K  +    L   +   G  PD  T ++++  
Sbjct: 805  VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 862

Query: 152  FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
             C+ G V+       +++   F PN + FTSLI GLC +  I +A  +  +      +P+
Sbjct: 863  LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 922

Query: 212  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
            V+T+  LI+GLC+ G T  A  LF ++   +       KPN  TY ++I G CKE  +++
Sbjct: 923  VYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNR 977

Query: 272  AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
            A+ LF +MK++ + P+V TYT++I G C A  +  A  L   M D+G  P++ T++  +D
Sbjct: 978  AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 1037

Query: 332  ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             LCK  +  +A  LL      G+  +  TY  LI   C  + I+ A   F  M   G   
Sbjct: 1038 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 1097

Query: 392  DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            D+   N LI  +C+ K ++E+  L+  ++S G+ PT  TY ++     +   ++ ALK F
Sbjct: 1098 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 1157

Query: 452  DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
              M+R+    D++TY + I GLCK   V EA +L+ A+ D
Sbjct: 1158 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 1197



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 179/348 (51%), Gaps = 8/348 (2%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            N A+  F  M+ +   P  ++ F  L   L K         + + +   G  P++YTH+ 
Sbjct: 870  NRAIWYFRKMIDLGFKPNLIN-FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 928

Query: 148  LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+  CK G     F +  +++RS  + PN  T+TS+I G C E ++  A  LF++ +  
Sbjct: 929  LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 988

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               P+V TY TLING C+ G    A     E+ N  G+ G +  PN  TYN  ID LCK+
Sbjct: 989  GLFPNVNTYTTLINGHCKAGSFGRAY----ELMNLMGDEGFM--PNIYTYNAAIDSLCKK 1042

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
                +A EL  K     +  D VTYT +I+  C  ND N+A   F  M   G + D+   
Sbjct: 1043 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 1102

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            ++++   C+  KM ++ RL +L++  G+ P   TY ++I  YC    ID A K F +M+ 
Sbjct: 1103 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 1162

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            +GC+ D  +Y +LI+  CK   V+EA  LY  M+ +G+ P  VT  TL
Sbjct: 1163 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 1210



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 172/359 (47%), Gaps = 7/359 (1%)

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            ++  F ++GR++    ++  +     TP+++T   +++       I  A  +F +  V  
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              PD  +Y  ++ G  R G    A    +    G  + G +  P+  T   I+  LC+ G
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENG 867

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             V++A   F KM D    P+++ +TS+I G C      +A  +  EM+  G +P+V T +
Sbjct: 868  LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 927

Query: 328  VIMDELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++D LCK G  +KA RL L+L+      PN +TY ++I GYC  DK++ A  LF  M+ 
Sbjct: 928  ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 987

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   +V +Y TLIN +CK      A  L + M  +G  P + TYN     L +  +   
Sbjct: 988  QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 1047

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A +L ++     + AD  TY   I   CK   + +AL  F  +  + +E ++   N LI
Sbjct: 1048 AYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 1106



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 165/355 (46%), Gaps = 19/355 (5%)

Query: 173  FTPNAVTFT---SLIKGLCAESRIMEA------AALFTKHRVFACEPDVFTYNTLINGLC 223
            F  N++T     +++  L +ES  M A      A  F K R F     V   + L NG  
Sbjct: 685  FDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNL 744

Query: 224  RTGHTIV--ALNLFEEMANGNGEFGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKE 274
            +  H ++   L  F E+   N   G+V         P+++T N +++   + G ++ A+ 
Sbjct: 745  QKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN 804

Query: 275  LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
            +F +M    + PD  +Y  ++ G        EA R    M+ +G  PD  T ++I+  LC
Sbjct: 805  VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 864

Query: 335  KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
            +NG +++A      MI  G  PN   + +LIDG C    I  A ++   M  NG   +V 
Sbjct: 865  ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 924

Query: 395  SYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            ++  LI+  CK    E+A  L+ +++ S   KP V TY ++  G  +  ++ RA  LF  
Sbjct: 925  THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 984

Query: 454  MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M+   +  +  TY   I+G CK+G    A EL   + D  +  NI +YN  ID L
Sbjct: 985  MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 1039


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 210/408 (51%), Gaps = 19/408 (4%)

Query: 105 PPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHG 161
           P V ++N+L    CLA+    +   ++ + +    G+ P + TH+++++  CK G+V   
Sbjct: 152 PDVETWNVLITGYCLAREP--EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
                 + RS    +A TF+ LI GL     +++A +L  +     C  D+ TY  ++N 
Sbjct: 210 MDHFEAVRRS-MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNW 268

Query: 222 LCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           L +      A+ L E++ ANG       C P   TYN +++GLCK G +++A +L  K+ 
Sbjct: 269 LAKNKKIQEAVALMEKITANG-------CTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 321

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           D    PDVVTYTS+I G        EA +LF EM  +G+  D V ++ ++  L + GK+ 
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +AS + + M   G  P+  T +T+IDG     +I  A ++F SME+ G   + V Y+ LI
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 441

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  CK + ++ AL + ++M      P  +TYN L  GL +   VE A   FDEM      
Sbjct: 442 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 501

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D YTYN  I GLCK+G    A  +   +  S++      Y+ L+DGL
Sbjct: 502 PDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGL 544



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 216/485 (44%), Gaps = 71/485 (14%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA  +   M       P + + N++   L K+      +  F+ +  + +     T S
Sbjct: 170 PEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFS 228

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILIN   K G +     +      +  T +  T+T+++  L    +I EA AL  K    
Sbjct: 229 ILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITAN 288

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ VTY ++IDGL KE
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGKE 342

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
               +A +LF +M    +  D V YT++IRG        +A  ++  M   G  PDVVT 
Sbjct: 343 KRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTL 402

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S ++D L K G++  A R+ + M  RG+ PN   Y+ LI G C   K+D A ++   M+ 
Sbjct: 403 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 462

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY--------------- 431
             C  D ++YN LI+  CK+ DVE A + + EML  G KP V TY               
Sbjct: 463 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDA 522

Query: 432 ---------------NTLFLGLFEIHQVERALKLFDEMRRNHVAADT------------- 463
                          ++L  GL +  ++E    LF EM R+ VA                
Sbjct: 523 ACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKAN 582

Query: 464 --------------------YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
                               Y YN+ I  L KSG V E   +++ +    ++ + V+YN 
Sbjct: 583 RVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNA 641

Query: 504 LIDGL 508
           L++G+
Sbjct: 642 LLNGM 646



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 212/427 (49%), Gaps = 34/427 (7%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSA--GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +F CL   K  D    LF+ L+S   G    ++T + L++ F +  R      +L   L 
Sbjct: 91  IFQCL---KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELA 147

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTI 229
           + F P+  T+  LI G C      EA A+  +    F   P + T+N +++GLC++G  +
Sbjct: 148 TIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVL 207

Query: 230 VALNLFEE--------------MANGNGEFGVVCKPNTV--------------TYNTIID 261
            A++ FE               + NG  + G++ + +++              TY  I++
Sbjct: 208 AAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVN 267

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            L K   + +A  L  K+      P + TY +++ G C      EA  L  +++D G  P
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           DVVT++ ++D L K  +  +A +L + M  RG+  +T  Y  LI G   T KI  A  ++
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
            +M S+GC+ DVV+ +T+I+   K   +  A+ ++  M ++G+ P  V Y+ L  GL + 
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +++ AL++  +M++     DT TYN  IDGLCKSG V  A   F  + ++  + ++ +Y
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 502 NCLIDGL 508
           N LI GL
Sbjct: 508 NILISGL 514



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 196/417 (47%), Gaps = 82/417 (19%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  +   LAKNK     ++L +++ + G  P I T++ L+N  CKMGR+     +L 
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFA----------------- 207
           +I+ +  TP+ VT+TSLI GL  E R  EA  LF +   R  A                 
Sbjct: 319 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG 378

Query: 208 ----------------CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK 250
                           C PDV T +T+I+GL + G    A+ +F+ M A G         
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG-------LA 431

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           PN V Y+ +I GLCK   +D A E+  +MK     PD +TY  +I G C + D   A+  
Sbjct: 432 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 491

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F EM++ G +PDV T+++++  LCK G  D A  +L+ M     + + + Y++L+DG C 
Sbjct: 492 FDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCK 546

Query: 371 TDKIDHARKLFVSMESNGC---------------------------------MHDVVSYN 397
           + K++    LF  ME +G                                  M    +YN
Sbjct: 547 SGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYN 606

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           ++I+   K+  V E  ++Y EM ++  KP  VTYN L  G+   ++++RA   + EM
Sbjct: 607 SIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEM 662



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 148/288 (51%), Gaps = 14/288 (4%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V + + +   L+K       + +FK + + GL P+   +S LI+  CK  ++  
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L ++ ++  TP+ +T+  LI GLC    +  A A F +     C+PDV+TYN LI+
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 512

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GLC+ G+T  A  + ++M++           +   Y++++DGLCK G ++    LF +M+
Sbjct: 513 GLCKAGNTDAACGVLDDMSS-----------SRFVYSSLVDGLCKSGKLEGGCMLFHEME 561

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              +  +  T T +I   C AN  +EA  LF  +  +G+ P    ++ I+  L K+GK++
Sbjct: 562 RSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVN 619

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +   + + M  R   P+  TYN L++G    +++D A   ++ M   G
Sbjct: 620 EGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+N +    +   + +    +   +   G+ PD YT+  LI+  CK GR+     +
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 265

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PNAVT+ +LI G C +  +  A +   +       P V TYN L++ L  
Sbjct: 266 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 325

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A ++ +EM       G++  P+ +TYN +I+G  + G   +A +L  +M  + I
Sbjct: 326 EGRMGEADDMIKEMRKK----GII--PDAITYNILINGYSRCGNAKRAFDLHNEMLSKGI 379

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P  VTYTS+I      N   EA  LF +++DQGV PDV+ F+ ++D  C NG +++A  
Sbjct: 380 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFM 439

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M  + V P+  T+NTL+ G C   K++ AR L   M+  G   D +SYNTLI+ Y 
Sbjct: 440 LLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYG 499

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +  D+++A  +  EMLS G  PT++TYN L   L +  + + A +L  EM    ++ D  
Sbjct: 500 RRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 559

Query: 465 TYNNFIDGL 473
           TY + I+G+
Sbjct: 560 TYLSLIEGM 568



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 200/399 (50%), Gaps = 12/399 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L G L K + +         +   G  P++ +++ +I+ +   G +     +L  + 
Sbjct: 182 FDLLEGKLKKAREF------IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR 235

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P++ T+ SLI G+C E R+ EA+ LF K       P+  TYNTLI+G C  G   
Sbjct: 236 VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 295

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A +  +EM       G++  P+  TYN ++  L  EG + +A ++  +M+ + I PD +
Sbjct: 296 RAFSYRDEMVKK----GIM--PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 349

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  +I G+    +   A  L  EM+ +G++P  VT++ ++  L +  +M +A  L E +
Sbjct: 350 TYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + +GV+P+   +N +IDG+C    ++ A  L   M+      D V++NTL+   C+   V
Sbjct: 410 LDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 469

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           EEA  L  EM  +GIKP  ++YNTL  G      ++ A  + DEM          TYN  
Sbjct: 470 EEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNAL 529

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I  LCK+     A EL + + +     +  +Y  LI+G+
Sbjct: 530 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 7/346 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I D M R+    P   ++  L   + K    +    LF ++   GL P+  T++ LI+ +
Sbjct: 230 ILDAM-RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 288

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G +   F     +++    P+  T+  L+  L  E R+ EA  +  + R     PD 
Sbjct: 289 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 348

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LING  R G+   A +L  EM +   E      P  VTY ++I  L +   + +A
Sbjct: 349 ITYNILINGYSRCGNAKRAFDLHNEMLSKGIE------PTHVTYTSLIYVLSRRNRMKEA 402

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +LF K+ D+ ++PDV+ + ++I G C   +   A  L  EM  + V PD VTF+ +M  
Sbjct: 403 DDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 462

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+ GK+++A  LL+ M  RG+ P+  +YNTLI GY     I  A  +   M S G    
Sbjct: 463 RCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT 522

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +++YN LI   CKN++ + A  L  EM++KGI P   TY +L  G+
Sbjct: 523 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F+  L  +   P   ++N +         +D    L +R  + G  P +  ++ 
Sbjct: 317 DEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 375

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ C  K  RV     +   + R    PN  T+  LI  LC E ++  A  +        
Sbjct: 376 ILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAG 434

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +I+ LC+      A ++FE M +       VC PN VT++++IDGL K G
Sbjct: 435 LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK------VCTPNAVTFSSLIDGLGKCG 488

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A  L+ KM D    P  + YTS+IR F       +  +++ EM+  G  PD+   +
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+ +K   L   +   G  P+  +Y+ LI G       +   +LF +M+  
Sbjct: 549 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YN +I+ +CK+  V +A  L  EM  KG  PTVVTY ++  GL +I +++ A
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E + N +  +   Y++ IDG  K G + EA  +   +       N+ ++NCL+D 
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728

Query: 508 L 508
           L
Sbjct: 729 L 729



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 221/485 (45%), Gaps = 68/485 (14%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL IF+ M R   + P V ++NIL   L +    +  L +   +  AGLFP++ T +I+
Sbjct: 388 EALRIFEEMKR--DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 445

Query: 149 INCFCKM-----------------------------------GRVSHGFVVLGRILRSCF 173
           I+  CK                                    GRV   + +  ++L    
Sbjct: 446 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 505

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            P A+ +TSLI+      R  +   ++ +     C PD+   NT ++ + + G T     
Sbjct: 506 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 565

Query: 234 LFEEMANGNGEF-----------GVV-------------------CKPNTVTYNTIIDGL 263
           LF E+ N +G             G+V                   C  +T  YN +IDG 
Sbjct: 566 LFREI-NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 624

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G V+KA +L  +MK +   P VVTY SVI G    +  +EA  LF E    G++ +V
Sbjct: 625 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 684

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V +S ++D   K G++D+A  ++E ++ +G+ PN YT+N L+D     ++I+ A   F S
Sbjct: 685 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQS 744

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+   C  + ++Y+ LIN  C+ +   +A   + EM   G+KP  +TY T+  GL +   
Sbjct: 745 MKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGN 804

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A  LF   + N    D+ +YN  I+GL  +   ++A  LF   R     ++  +   
Sbjct: 805 ILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVV 864

Query: 504 LIDGL 508
           L+D L
Sbjct: 865 LLDAL 869



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 201/450 (44%), Gaps = 29/450 (6%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+  L +F  M  +      V  F  L    A+    D  LSL   + S  L  DI  ++
Sbjct: 211 PDPMLILFHQMQELG-YEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYN 269

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           + I+CF K G+V   +     +      P+ VT+TS+I  LC  +R+ EA  LF +    
Sbjct: 270 VCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQN 329

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFE-EMANGN----------------------- 242
              P  + YNT+I G    G    A  L E + A G+                       
Sbjct: 330 RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 389

Query: 243 ----GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                E      PN  TYN +ID LC+EG ++ A E+   M+   + P+V+T   +I   
Sbjct: 390 LRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 449

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A    EA  +F  M D+   P+ VTFS ++D L K G++D A  L E M+  G  P  
Sbjct: 450 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 509

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             Y +LI  +    + +   K++  M   GC  D+   NT ++   K  + E+  +L+ E
Sbjct: 510 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 569

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           + + G  P   +Y+ L  GL +        +LF  M+      DT+ YN  IDG CKSG 
Sbjct: 570 INAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK 629

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V +A +L   ++   +   +V+Y  +IDGL
Sbjct: 630 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 189/404 (46%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++ IL G L++ +  D +L LF ++   G   +++  + LI  F + GRV     +
Sbjct: 193 PAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSL 252

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +    + V +   I       ++  +   F + +     PD  TY ++I  LC+
Sbjct: 253 LDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCK 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ LFE++            P    YNT+I G    G  D+A  L  + K +  
Sbjct: 313 ANRLDEAVELFEQLEQNRK------VPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P V+ Y  ++          EA R+F EM    V P+V T+++++D LC+ GK++ A  
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALE 425

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M   G+ PN  T N +ID  C   K++ A  +F  M+   C  + V++++LI+   
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   V++A SLY +ML  G  P  + Y +L    F+  + E   K++ EM     + D  
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             N ++D + K+G   +   LFR I    +  +  SY+ LI GL
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 181/393 (46%), Gaps = 15/393 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPV---SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  +++ ML     P  +   S     F C  K   +     ++K +   G  PD+  
Sbjct: 491 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH----KIYKEMVHTGCSPDLTL 546

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +  ++C  K G    G  +   I    F P+A +++ LI GL       E   LF   +
Sbjct: 547 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 606

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGL 263
              C  D   YN +I+G C++G    A  L EEM   G+        P  VTY ++IDGL
Sbjct: 607 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH-------PPTVVTYGSVIDGL 659

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K   +D+A  LF + K   I  +VV Y+S+I GF      +EA  +  E+M +G+ P+V
Sbjct: 660 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 719

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++D L K  ++++A    + M      PN  TY+ LI+G C   K + A   +  
Sbjct: 720 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 779

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  G   + ++Y T+I+   K  ++ EA  L+S   + G  P   +YN +  GL   ++
Sbjct: 780 MQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 839

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
              A  LF+E R       T T    +D L K+
Sbjct: 840 AMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 872



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 6/343 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P ++  N    C+ K    +   +LF+ +N+ G  PD  ++SILI+   K G  +  + +
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 601

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       +   + ++I G C   ++ +A  L  + +V    P V TY ++I+GL +
Sbjct: 602 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LFEE A  NG      K N V Y+++IDG  K G +D+A  +  ++  + +
Sbjct: 662 IDRLDEAYMLFEE-AKSNG-----IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 715

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V T+  ++     A + NEA   F  M D    P+ +T+S++++ LC+  K +KA  
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + M   G+ PNT TY T+I G      I  A  LF   ++NG + D  SYN +I    
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLS 835

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                 +A +L+ E   KG      T   L   L +   +E+A
Sbjct: 836 SANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 182/397 (45%), Gaps = 7/397 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L   +A+N  +D +  + + ++ +G  P       L+    K  ++   F ++  +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +  F P    +T LI  L           LF + +    E +V  + TLI    R G  
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL+L +EM + +         + V YN  ID   K G VD + + F +MK   + PD 
Sbjct: 247 DAALSLLDEMKSNS------LDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYTS+I   C AN  +EA  LF ++      P    ++ ++      GK D+A  LLE 
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
              +G  P+   YN ++       +++ A ++F  M+ +  + +V +YN LI+  C+   
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGK 419

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  AL +  +M   G+ P V+T N +   L +  ++E A  +F+ M       +  T+++
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 479

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            IDGL K G V +A  L+  + D  +    + Y  LI
Sbjct: 480 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 516



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 7/256 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  + + M ++   PP V ++  +   LAK    D    LF+   S G+  ++  +S 
Sbjct: 631 NKAYQLLEEM-KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F K+GR+   ++++  +++   TPN  T+  L+  L     I EA   F   +   
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C P+  TY+ LINGLCR      A   ++EM     + G+  KPNT+TY T+I GL K G
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTITYTTMISGLAKAG 803

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A  LF + K     PD  +Y ++I G   AN   +A  LF E   +G      T  
Sbjct: 804 NILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 863

Query: 328 VIMDELCKNGKMDKAS 343
           V++D L K   +++A+
Sbjct: 864 VLLDALHKAECLEQAA 879



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 1/259 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P    Y  +I  L +    D    LF +M++     +V  +T++IR F      + A  
Sbjct: 192 RPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALS 251

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM    +  D+V ++V +D   K GK+D + +    M   G+ P+  TY ++I   C
Sbjct: 252 LLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLC 311

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             +++D A +LF  +E N  +    +YNT+I  Y      +EA  L     +KG  P+V+
Sbjct: 312 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 371

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            YN +   L +  +VE AL++F+EM+R+ V  +  TYN  ID LC+ G +  ALE+   +
Sbjct: 372 AYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDM 430

Query: 490 RDSKYELNIVSYNCLIDGL 508
             +    N+++ N +ID L
Sbjct: 431 ERAGLFPNVLTVNIMIDRL 449


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 197/390 (50%), Gaps = 8/390 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   SFN++   L +  + D  + +F+ ++      D YT+S L++  C  GR+     +
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN V F  LI  LC +  +  A+ L     +  C P+  TYN+L++GLC 
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++L   M          C PN +T+ T++DG  K G       + + ++++  
Sbjct: 293 KGKLDKAMSLLNRMVANK------CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 346

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +  +Y+S+I G           +L+ EM+++G +P+ + +S ++D LC+ GK D+A  
Sbjct: 347 RGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 406

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M  +G  PN++TY++L+ GY     I  A  ++  M  N C H  V Y+ LIN  C
Sbjct: 407 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 466

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAAD 462
           KN  ++EAL ++ +MLS+GIK  VV Y+++  G      VE+ +KLF++M      +  D
Sbjct: 467 KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPD 526

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             TYN  ++  C    V  A+++   + D 
Sbjct: 527 VVTYNILLNAFCTKNSVSRAIDILNTMLDQ 556



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M      P PV+ FN+L   L K         L   +   G  P+  T++ 
Sbjct: 227 DEAVSLLDEMQVEGTFPNPVA-FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  C  G++     +L R++ +   PN +TF +L+ G     R ++   +        
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              + F+Y++LI+GL + G     + L++EM          CKPNT+ Y+ +IDGLC+EG
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG------CKPNTIVYSALIDGLCREG 399

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+AKE  ++MK++   P+  TY+S++ G+  A D ++A  ++ EM D       V +S
Sbjct: 400 KPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYS 459

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--E 385
           ++++ LCKNGK+ +A  + + M+ RG+  +   Y+++I G+C    ++   KLF  M   
Sbjct: 460 ILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCH 519

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           +     DVV+YN L+N +C    V  A+ + + ML +G  P  +T
Sbjct: 520 NPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 192/394 (48%), Gaps = 24/394 (6%)

Query: 114 FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF 173
           F C    K ++TVL++  +     L  + Y H I  N F                  S  
Sbjct: 130 FHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSF------------------SNI 171

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            PN ++F  +IK LC    + +A  +F       C  D +TY+TL++GLC  G    A++
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVS 231

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L +EM    G F     PN V +N +I  LCK+G + +A +L   M  +   P+ VTY S
Sbjct: 232 LLDEM-QVEGTF-----PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 285

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++ G C     ++A  L   M+     P+ +TF  ++D   K+G+     R+L  +  +G
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
              N ++Y++LI G     K +H  +L+  M   GC  + + Y+ LI+  C+    +EA 
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
               EM +KG  P   TY++L  G FE   + +A+ ++ EM  N        Y+  I+GL
Sbjct: 406 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 465

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK+G + EAL +++ +     +L++V+Y+ +I G
Sbjct: 466 CKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHG 499



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 172/317 (54%), Gaps = 5/317 (1%)

Query: 194 MEAAALFTKHRV---FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
           +   AL   HR+   F C+  V ++NT++N + + G   +AL  +  + + N    +  +
Sbjct: 115 LPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNI--Q 172

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           PN +++N +I  LC+ G VD+A E+F  M D N   D  TY++++ G C     +EA  L
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             EM  +G  P+ V F+V++  LCK G + +AS+L++ M  +G  PN  TYN+L+ G CL
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+D A  L   M +N C+ + +++ TL++ + K+    + + +   +  KG +    +
Sbjct: 293 KGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS 352

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y++L  GLF+  + E  ++L+ EM       +T  Y+  IDGLC+ G   EA E    ++
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 412

Query: 491 DSKYELNIVSYNCLIDG 507
           +  +  N  +Y+ L+ G
Sbjct: 413 NKGHTPNSFTYSSLMWG 429



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 164/338 (48%), Gaps = 15/338 (4%)

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV---ALNL 234
           ++F SLI+     S  ++  +L        CE  VF   + I      G   +   AL+L
Sbjct: 66  LSFYSLIENF---SNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDL 122

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN----INPDVVT 290
           F  M     EF   CK    ++NT+++ + +EG  D A E +  + D N    I P+ ++
Sbjct: 123 FHRMG---AEFH--CKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLS 177

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           +  VI+  C   + ++A  +F  M D+    D  T+S +M  LC  G++D+A  LL+ M 
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G  PN   +N LI   C    +  A KL  +M   GC+ + V+YN+L++  C    ++
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 297

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A+SL + M++    P  +T+ TL  G  +  +    +++   +       + ++Y++ I
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 357

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            GL K G     ++L++ + +   + N + Y+ LIDGL
Sbjct: 358 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 395



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 9/324 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L      D  +SL  R+ +    P+  T   L++ F K GR   G  V
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 337

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +    +  N  +++SLI GL  E +      L+ +     C+P+   Y+ LI+GLCR
Sbjct: 338 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 397

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A     EM N          PN+ TY++++ G  + G + KA  ++ +M D + 
Sbjct: 398 EGKPDEAKEYLIEMKNKGH------TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDC 451

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           N   V Y+ +I G C      EA  ++ +M+ +G++ DVV +S ++   C    +++  +
Sbjct: 452 NHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMK 511

Query: 345 LLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           L   M+     + P+  TYN L++ +C  + +  A  +  +M   GC  D ++ +  +  
Sbjct: 512 LFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKT 571

Query: 403 YCKNKD-VEEALSLYSEMLSKGIK 425
              N D  ++      E++ + IK
Sbjct: 572 LRDNMDPPQDGREFLDELVVRLIK 595


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 211/421 (50%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F+ M +   + P +S++NIL   L +    DT   L   +  AGLFP++ T +I
Sbjct: 360 DEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK  ++     +   +     TP+ +TF SLI GL    R+ +A  ++ K     
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C  +   Y +LI      G       ++++M N N      C P+    NT +D + K G
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN------CSPDLQLLNTYMDCMFKAG 531

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +K + +F ++K     PD  +Y+ +I G   A   NE   LF  M +QG   D   ++
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++D  CK GK++KA +LLE M  +G  P   TY ++IDG    D++D A  LF   +S 
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               +VV Y++LI+ + K   ++EA  +  E++ KG+ P + T+N+L   L +  ++  A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L  F  M+      +  TY   I+GLCK     +A   ++ ++    + + +SY  +I G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771

Query: 508 L 508
           L
Sbjct: 772 L 772



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 211/421 (50%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F++ L  +   P   ++N +         +D   SL +R  + G  P +  ++ 
Sbjct: 290 DEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ C  KMG+V     V   + +    PN  T+  LI  LC   ++  A  L    +   
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V T N +++ LC++     A  +FEEM         VC P+ +T+ ++IDGL K G
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDEITFCSLIDGLGKVG 461

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A +++ KM D +   + + YTS+I+ F       +  +++ +M++Q   PD+   +
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+ +K   + E +  R   P+  +Y+ LI G       +   +LF SM+  
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC+ D  +YN +I+ +CK   V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E +   +  +   Y++ IDG  K G + EA  +   +       N+ ++N L+D 
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701

Query: 508 L 508
           L
Sbjct: 702 L 702



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 206/441 (46%), Gaps = 30/441 (6%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R     P  S++  L G  +   H D +L+LF+++   G  P ++  + LI  F K G
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           RV     +L  +  S    + V +   I       ++  A   F +      +PD  TY 
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277

Query: 217 TLINGLCRTGHTIVALNLFEE---------------MANGNGEFGVVCK----------- 250
           ++I  LC+      A+ +FE                M  G G  G   +           
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337

Query: 251 ---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P+ + YN I+  L K G VD+A ++F +MK ++  P++ TY  +I   C A   + A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTA 396

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             L   M   G+ P+V T ++++D LCK+ K+D+A  + E M ++   P+  T+ +LIDG
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                ++D A K++  M  + C  + + Y +LI  +  +   E+   +Y +M+++   P 
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +   NT    +F+  + E+   +F+E++      D  +Y+  I GL K+GF  E  ELF 
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
           ++++    L+  +YN +IDG 
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGF 597



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 193/418 (46%), Gaps = 7/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A+  F +  R    P    S+N L   +A+ +++D +  +   ++ AG  P + T   
Sbjct: 79  NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++    K  ++  G+ V+  + +  F P    +T+LI    A +       LF + +   
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP V  + TLI G  + G    AL+L +EM + +         + V YN  ID   K G
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS------LDADIVLYNVCIDSFGKVG 252

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A + F +++   + PD VTYTS+I   C AN  +EA  +F  +      P    ++
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++      GK D+A  LLE    +G  P+   YN ++       K+D A K+F  M+ +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               ++ +YN LI+  C+   ++ A  L   M   G+ P V T N +   L +  +++ A
Sbjct: 373 AA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             +F+EM       D  T+ + IDGL K G V +A +++  + DS    N + Y  LI
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 171/364 (46%), Gaps = 6/364 (1%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           ++K + +    PD+   +  ++C  K G    G  +   I    F P+A +++ LI GL 
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                 E   LF   +   C  D   YN +I+G C+ G    A  L EEM     E    
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE---- 619

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P  VTY ++IDGL K   +D+A  LF + K + I  +VV Y+S+I GF      +EA 
Sbjct: 620 --PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +  E+M +G+ P++ T++ ++D L K  ++++A    + M      PN  TY  LI+G 
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   K + A   +  M+  G     +SY T+I+   K  ++ EA +L+    + G  P  
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
             YN +  GL   ++   A  LF+E RR  +     T    +D L K+  + +A  +   
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAV 857

Query: 489 IRDS 492
           +R++
Sbjct: 858 LRET 861



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 46/372 (12%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F P       +++ L   +R +E    + +       P+ +    L+   CR        
Sbjct: 61  FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN------- 113

Query: 233 NLFEEMANGNGEFGVVC-KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             F+ +    GE  V    P+  T   ++ G  K   + +  ++   M+     P    Y
Sbjct: 114 --FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T++I  F   N  +    LF +M + G +P V  F+ ++    K G++D A  LL+ M  
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
             ++ +   YN  ID +    K+D A K F  +E+NG   D V+Y ++I   CK   ++E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLG---------------------------------- 437
           A+ ++  +      P    YNT+ +G                                  
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351

Query: 438 -LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L ++ +V+ ALK+F+EM+++  A +  TYN  ID LC++G +  A EL  +++ +    
Sbjct: 352 CLRKMGKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410

Query: 497 NIVSYNCLIDGL 508
           N+ + N ++D L
Sbjct: 411 NVRTVNIMVDRL 422


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           + + +L  AGL P+    ++L+    ++G ++    V   +         V+F ++I G+
Sbjct: 226 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 285

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    +  A  L  +       PDV+TY  LI GLCR G    A  +FE+M  G G    
Sbjct: 286 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC-GRG---- 340

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
             KPN V +  +ID  CK+G  +   EL  +M++  + PD VTY +++ G C A D   A
Sbjct: 341 -MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 399

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             + +EM   G++PD VT++ ++D  CK  ++D A  + + M+  GV  +  TY  LI G
Sbjct: 400 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 459

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                +   A ++   M   G   D  +Y  +I+ +C+  DV+  L L  EM +KG KP 
Sbjct: 460 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 519

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTYN +  G  ++ Q++ A  L + M    V+ D  TYN  +DG CK G V +  EL  
Sbjct: 520 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 579

Query: 488 A 488
           A
Sbjct: 580 A 580



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 172/328 (52%), Gaps = 9/328 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V SFN +   + +    D   +L +R++ AG+ PD+YT+  LI   C++GR+     V  
Sbjct: 275 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 334

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++      PNAV FT LI   C +        L  + R     PD  TYN ++NGLCR  
Sbjct: 335 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 394

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +  EM +         +P+TVTY T+IDG CKE  +D A E+   M  E +  
Sbjct: 395 DLKSASGIVVEMRSAG------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 448

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTYT++I G   A    +A+R+  EMM+ G++PD  T+++++D  C+ G +    RLL
Sbjct: 449 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 508

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  +G  P   TYN +++G+C   ++ +A  L  +M + G   D ++YN L++ +CK+
Sbjct: 509 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 568

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             V +   L S   +KG  P +  Y ++
Sbjct: 569 GKVTDIEELKS---AKGTVPDLGVYTSI 593



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 166/313 (53%), Gaps = 6/313 (1%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA A + +       P+   +N L+  L R G    A N+F+EM +     GV  +   V
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVV 276

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           ++NT+I G+C+ G +D A+ L  +M +  + PDV TY ++I+G C      +A+ +F +M
Sbjct: 277 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             +G++P+ V F++++D  CK G  +    L   M  RGV P+  TYN +++G C    +
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  + V M S G   D V+Y TLI+ YCK ++++ A+ +   M+++G+    VTY  L
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 456

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  +   A ++  EM    +  D  TY   ID  C+ G V   L L + +++   
Sbjct: 457 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 516

Query: 495 ELNIVSYNCLIDG 507
           +  +V+YN +++G
Sbjct: 517 KPGVVTYNVIMNG 529



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 92  CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           C F   L     PP    FN+L   L +     +  ++F  + S G+   + + + +I+ 
Sbjct: 225 CAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISG 284

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            C+ G +     +  R+  +  TP+  T+ +LI+GLC   RI +A  +F K      +P+
Sbjct: 285 MCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 344

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
              +  LI+  C+ G     L L  EM     E GV  +P+ VTYN I++GLC+   +  
Sbjct: 345 AVVFTILIDAHCKKGDAETMLELHREMR----ERGV--RPDAVTYNAIVNGLCRARDLKS 398

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A  + ++M+   + PD VTYT++I G+C   + + A  +   M+ +GV  D VT++ ++ 
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            L K G+   A R+L  M+  G+ P+  TY  +ID +C    +    +L   M++ G   
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            VV+YN ++N +CK   ++ A  L + M++ G+ P  +TYN L  G
Sbjct: 519 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 564



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 120/233 (51%)

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           +L++ D  + P+   +  ++R      +   A+ +F EM  +GV+  VV+F+ ++  +C+
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G +D A  L   M   GV P+ YTY  LI G C   +I+ AR +F  M   G   + V 
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +  LI+ +CK  D E  L L+ EM  +G++P  VTYN +  GL     ++ A  +  EMR
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +  DT TY   IDG CK   +  A+E+ + +      L+ V+Y  LI GL
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/120 (19%), Positives = 60/120 (50%), Gaps = 3/120 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +++ ++     +     T L L K + + G  P + T+++++N FCK+G++ +  ++
Sbjct: 483 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 542

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++    +P+ +T+  L+ G C   ++ +   L +        PD+  Y +++  + +
Sbjct: 543 LNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTV---PDLGVYTSIVGEIVK 599


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 201/431 (46%), Gaps = 46/431 (10%)

Query: 98  LRMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           LR H  P  V + N +L   L +  H+      F   +  G+ PD  +   L+   C+ G
Sbjct: 139 LRSHGLPLVVETANWVLRVGLRQRHHFAHARQAF---DGMGVRPDARSFRALVLGCCQEG 195

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           R      +L  + R  F+ ++ T T +++  C + R  +   LF +       P+V  Y 
Sbjct: 196 RFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYT 255

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
             ++GLC+ G+   A ++ EEM  G G      KPN  T+ ++IDGLCK G+ ++A  LF
Sbjct: 256 AWVDGLCKRGYVKQAFHVLEEMV-GKG-----LKPNVYTHTSLIDGLCKIGWTERAFRLF 309

Query: 277 LKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           LK+ K  +  P+V TYT +I G+C       A+ L   M++QG+ P+  T++ ++D  C+
Sbjct: 310 LKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCR 369

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G  D+A  L+  M   G  PN YTYN +I G+C   KI  A K+     S G   D V+
Sbjct: 370 GGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVT 429

Query: 396 YNTLINWYCKNKDVEEALSLYSEM-----------------------------------L 420
           Y  LI  +CK   +  AL L+++M                                   L
Sbjct: 430 YTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCL 489

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           S G+ PT  TY ++  G   + +   ALK+F+ M ++    D  TY   I GLCK   + 
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLE 549

Query: 481 EALELFRAIRD 491
           EA  LF  + D
Sbjct: 550 EARALFETMLD 560



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 200/419 (47%), Gaps = 19/419 (4%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M+ M  +PP V ++      L K  +      + + +   GL P++YTH+ LI+  
Sbjct: 238 LFGRMVEM-GNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 153 CKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           CK+G     F +  ++++S  + PN  T+T +I G C E ++  A  L  +       P+
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             TY TLI+G CR G    A  L  +M    G       PN  TYN II G CK+G + +
Sbjct: 357 TNTYTTLIDGHCRGGSFDRAFELMNKM-KLEGFL-----PNIYTYNAIIGGFCKKGKIQQ 410

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A ++      + + PD VTYT +I   C       A  LF +M +    PD+ T++ I+ 
Sbjct: 411 AYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIA 470

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             C+  +M+++ +L +  +  G+ P   TY ++I GYC   K   A K+F  M  +GC+ 
Sbjct: 471 MYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLP 530

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D ++Y  LI+  CK   +EEA +L+  ML K + P  VT  TL        +   A+   
Sbjct: 531 DPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFL 590

Query: 452 DEM--RRNHVAADTYTYN-NFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLID 506
           D +  R+   AAD      + +D        L+A  LF + + D  Y ++  +Y   I+
Sbjct: 591 DGLDKRQQAHAADALVRKLSAVDN-------LDAASLFLKNVLDKHYAVDHATYTSFIN 642



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 169/342 (49%), Gaps = 7/342 (2%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           +   +  V  LF R+   G  P++  ++  ++  CK G V   F VL  ++     PN  
Sbjct: 228 RQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVY 287

Query: 179 TFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           T TSLI GLC       A  LF K  +  + +P+V TY  +I G C+ G    A  L   
Sbjct: 288 THTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 347

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M     E G+   PNT TY T+IDG C+ G  D+A EL  KMK E   P++ TY ++I G
Sbjct: 348 MV----EQGLA--PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGG 401

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC      +A ++      QG+ PD VT+++++ E CK G +  A  L   M     +P+
Sbjct: 402 FCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPD 461

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
             TY T+I  YC   +++ +++LF    S G +    +Y ++I  YC+      AL ++ 
Sbjct: 462 IDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFE 521

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
            M+  G  P  +TY  L  GL +  ++E A  LF+ M   H+
Sbjct: 522 RMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHM 563



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 140/278 (50%), Gaps = 2/278 (0%)

Query: 230 VALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
           V L      A+    F G+  +P+  ++  ++ G C+EG  ++A  L   M  E  + D 
Sbjct: 157 VGLRQRHHFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDS 216

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            T T V+R FC    + +   LF  M++ G  P+VV ++  +D LCK G + +A  +LE 
Sbjct: 217 ATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEE 276

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNK 407
           M+ +G+ PN YT+ +LIDG C     + A +LF+ + +S+    +V +Y  +I  YCK  
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  A  L   M+ +G+ P   TY TL  G       +RA +L ++M+      + YTYN
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYN 396

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             I G CK G + +A ++ R         + V+Y  LI
Sbjct: 397 AIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLI 434



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 6/286 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             A  +F  +++     P V ++ ++ G   K         L  R+   GL P+  T++ 
Sbjct: 303 ERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 362

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C+ G     F ++ ++    F PN  T+ ++I G C + +I +A  +        
Sbjct: 363 LIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQG 422

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  TY  LI   C+ GH   AL+LF +MA  +      C P+  TY TII   C++ 
Sbjct: 423 LCPDKVTYTMLITEHCKQGHITYALDLFNQMAENS------CHPDIDTYTTIIAMYCQQR 476

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++++++LF K     + P   TYTS+I G+C       A ++F  M+  G  PD +T+ 
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYG 536

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            ++  LCK  ++++A  L E M+ + + P   T  TL   YC  DK
Sbjct: 537 ALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDK 582


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 205/425 (48%), Gaps = 41/425 (9%)

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
            K+    T   ++KR+   G+ P++ T++ILI   C+ GR+   F + G+IL+    P+ 
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           VT++SLI G C    +    AL+         PDV  Y  L++GL + G  + A+    +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M       G   + N V +N++IDG C+    D+A ++F  M    I PDV T+T+V+R 
Sbjct: 487 M------LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK------------------- 338
                   EA  LF  M   G++PD + +  ++D  CK+ K                   
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600

Query: 339 ----------------MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
                           ++ AS+    +I   + P+  TYNT+I GYC   ++D A ++F 
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ++      + V+   LI+  CKN D++ A+ ++S M  KG KP  VTY  L     +  
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            +E + KLF+EM+   ++    +Y+  IDGLCK G V EA  +F    D+K   ++V+Y 
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780

Query: 503 CLIDG 507
            LI G
Sbjct: 781 ILIRG 785



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 210/437 (48%), Gaps = 41/437 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
           P V +F  L     K    D    LFK +   G+ PD+  +S LI+ + K G +  G   
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 163 ---------------------------------VVLGRILRSCFTPNAVTFTSLIKGLCA 189
                                            VV  R+L    +PN VT+T LIKGLC 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           + RI EA  ++ +      EP + TY++LI+G C+ G+      L+E+M        +  
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK------MGY 457

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ V Y  ++DGL K+G +  A    +KM  ++I  +VV + S+I G+C  N ++EA +
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F  M   G++PDV TF+ +M      G++++A  L   M   G+ P+   Y TLID +C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K     +LF  M+ N    D+   N +I+   K   +E+A   ++ ++   ++P +V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYNT+  G   + +++ A ++F+ ++      +T T    I  LCK+  +  A+ +F  +
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697

Query: 490 RDSKYELNIVSYNCLID 506
            +   + N V+Y CL+D
Sbjct: 698 AEKGSKPNAVTYGCLMD 714



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 230/517 (44%), Gaps = 77/517 (14%)

Query: 59  TVKDR---ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG 115
           +++DR   A + KFL E C   G  D       +AL IF Y  ++    P  S + +L  
Sbjct: 138 SIRDRSLDADVCKFLMECCCRYGMVD-------KALEIFVYSTQLGVVIPQDSVYRMLNS 190

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPD-IYTHSILINC-FCKMGRVS-----------HGF 162
            +  ++  D +   F +L   G+ P  +  H  +++  FCK G V+            GF
Sbjct: 191 LIGSDR-VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGF 248

Query: 163 VV-----------------------LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
            V                       L  +L     PN VTF +LI G C    +  A  L
Sbjct: 249 RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------- 248
           F        EPD+  Y+TLI+G  + G   +   LF +  +   +  VV           
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368

Query: 249 ---------------CK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
                          C+   PN VTY  +I GLC++G + +A  ++ ++    + P +VT
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y+S+I GFC   +      L+ +M+  G  PDVV + V++D L K G M  A R    M+
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            + +  N   +N+LIDG+C  ++ D A K+F  M   G   DV ++ T++        +E
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EAL L+  M   G++P  + Y TL     +  +    L+LFD M+RN ++AD    N  I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L K   + +A + F  + + K E +IV+YN +I G
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 41/417 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ IL   L ++        ++ ++   G+ P I T+S LI+ FCK G +  GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++  + P+ V +  L+ GL  +  ++ A     K    +   +V  +N+LI+G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL +F  M    G +G+  KP+  T+ T++     EG +++A  LF +M    +
Sbjct: 509 LNRFDEALKVFRLM----GIYGI--KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562

Query: 285 NPDVVTYTSVIRGFCY-----------------------------------ANDWNEAKR 309
            PD + Y ++I  FC                                     +   +A +
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            F  +++  ++PD+VT++ ++   C   ++D+A R+ EL+      PNT T   LI   C
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             + +D A ++F  M   G   + V+Y  L++W+ K+ D+E +  L+ EM  KGI P++V
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +Y+ +  GL +  +V+ A  +F +     +  D   Y   I G CK G ++EA  L+
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 7/373 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
              +++ M++M   PP V  + +L   L+K       +    ++    +  ++   + LI
Sbjct: 445 GFALYEDMIKMG-YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +C++ R      V   +      P+  TFT++++    E R+ EA  LF +      E
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD   Y TLI+  C+     + L LF+ M             +    N +I  L K   +
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK------ISADIAVCNVVIHLLFKCHRI 617

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A + F  + +  + PD+VTY ++I G+C     +EA+R+F  +      P+ VT +++
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LCKN  MD A R+  +M  +G  PN  TY  L+D +  +  I+ + KLF  M+  G 
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              +VSY+ +I+  CK   V+EA +++ + +   + P VV Y  L  G  ++ ++  A  
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797

Query: 450 LFDEMRRNHVAAD 462
           L++ M RN V  D
Sbjct: 798 LYEHMLRNGVKPD 810



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 8/292 (2%)

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT-YNTIIDGLCKEGFVDKAKELF 276
           ++N L  +    +  + F+++  G  E      P+ V+ +  ++D L  +G V KA +  
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFH 240

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             + +      +V+   V++G    +    A RL   ++D G  P+VVTF  +++  CK 
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G+MD+A  L ++M  RG+ P+   Y+TLIDGY     +    KLF      G   DVV +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           ++ I+ Y K+ D+  A  +Y  ML +GI P VVTY  L  GL +  ++  A  ++ ++ +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +     TY++ IDG CK G +     L+  +    Y  ++V Y  L+DGL
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 24/434 (5%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF--------KRLNSAGL 138
           PN AL  F +       P    SF  +   L +N  +D    +F        K  N  G 
Sbjct: 83  PNSALKYFRWAEISGKDP----SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGS 138

Query: 139 FPDIYTHS----ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
             D    +     L+ C C+ G V     +     +        +   ++  L    R+ 
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198

Query: 195 EAAALFTKHRVFACEPD-VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
             A  F K      EP  V  +  +++ L   G    AL+    +       G+V     
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV----- 253

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
            + N ++ GL  +  ++ A  L   + D    P+VVT+ ++I GFC   + + A  LF  
Sbjct: 254 -SCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G++PD++ +S ++D   K G +    +L    + +GV  +   +++ ID Y  +  
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A  ++  M   G   +VV+Y  LI   C++  + EA  +Y ++L +G++P++VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +   +     L+++M +     D   Y   +DGL K G +L A+     +    
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 494 YELNIVSYNCLIDG 507
             LN+V +N LIDG
Sbjct: 492 IRLNVVVFNSLIDG 505


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 199/398 (50%), Gaps = 8/398 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D ML      P V ++NIL     K + Y   L L   + + G  P+  T++++
Sbjct: 181 DALVVLDGML-CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVI 239

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C+ G V     +L  +      PN V + +++KG C+  R ++A  +  +     C
Sbjct: 240 IDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENC 299

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T N +IN LCR G  +  + L+ E  + +G     C  N VTYN +I G+C++G 
Sbjct: 300 PPNEATLNVIINTLCRKG-LLQKVTLYLEKMSKHG-----CTANVVTYNAVISGMCEQGN 353

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A EL   M+     PD+VTY +V++G C A+ W +A+ L I+M      PD  TF+ 
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNT 413

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+   C+ G + +A  + + M  +G NPN+ TY+T+I G     K++ A +L   M + G
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D + Y  L     K   +EE + +  ++   GI P  V YNT+ LGL    + + A+
Sbjct: 474 FNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAI 532

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +  +M       D  TY   I+GL   G+  EA EL 
Sbjct: 533 DVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 204/454 (44%), Gaps = 50/454 (11%)

Query: 94  FDYMLRM---HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D  LR+    P PP V   N L   L +         + +   + G      T+  L++
Sbjct: 80  LDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVD 136

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +C+ G +     V+G +       +A     LI  LC   R+ +A  +        C P
Sbjct: 137 GYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAP 196

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           DV TYN L+   C+      AL L + M A G       C+PN VTYN IID +C+EG V
Sbjct: 197 DVVTYNILLQAACKGRGYRQALELIDFMRAEG-------CEPNNVTYNVIIDAMCREGDV 249

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A+EL   +      P+ V Y +V++GFC    W +A  +  EM+ +   P+  T +VI
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ LC+ G + K +  LE M   G   N  TYN +I G C    +D A +L  +M+S GC
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 390 MHDVVSY-----------------------------------NTLINWYCKNKDVEEALS 414
             D+V+Y                                   NT+I+++C+   + +A  
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++ +M  KG  P   TY+T+  GL +  ++E+AL+L +EM       D   Y    + L 
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLN 488

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K   + E +++   ++DS      V YN ++ GL
Sbjct: 489 KEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGL 522



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 7/256 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N +   + +  + D+ L L   + S G  PDI T++ ++   C   R      ++ 
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++ ++   P+  TF ++I   C +  I++A  +F +     C P+  TY+T+I GL + G
Sbjct: 398 KMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAG 457

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL L  EMAN    F          Y  + + L KE  +++  ++  K++D  I+P
Sbjct: 458 KMEQALELLNEMANKG--FNT-----DKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISP 510

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             V Y +V+ G C     + A  +  +M+  G  PD  T+ ++++ L   G   +A  LL
Sbjct: 511 QTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570

Query: 347 ELMIWRGVNPNTYTYN 362
             +  R V  N+   N
Sbjct: 571 SRLCSRDVLSNSLIKN 586


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           + + +L  AGL P+    ++L+    ++G ++    V   +         V+F ++I G+
Sbjct: 102 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 161

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C    +  A  L  +       PDV+TY  LI GLCR G    A  +FE+M  G G    
Sbjct: 162 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC-GRG---- 216

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
             KPN V +  +ID  CK+G  +   EL  +M++  + PD VTY +++ G C A D   A
Sbjct: 217 -MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 275

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             + +EM   G++PD VT++ ++D  CK  ++D A  + + M+  GV  +  TY  LI G
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 335

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                +   A ++   M   G   D  +Y  +I+ +C+  DV+  L L  EM +KG KP 
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           VVTYN +  G  ++ Q++ A  L + M    V+ D  TYN  +DG CK G V +  EL  
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 455

Query: 488 A 488
           A
Sbjct: 456 A 456



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 172/329 (52%), Gaps = 9/329 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V SFN +   + +    D   +L +R++ AG+ PD+YT+  LI   C++GR+     V  
Sbjct: 151 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 210

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++      PNAV FT LI   C +        L  + R     PD  TYN ++NGLCR  
Sbjct: 211 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 270

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +  EM +         +P+TVTY T+IDG CKE  +D A E+   M  E +  
Sbjct: 271 DLKSASGIVVEMRSAG------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 324

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTYT++I G   A    +A+R+  EMM+ G++PD  T+++++D  C+ G +    RLL
Sbjct: 325 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 384

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  +G  P   TYN +++G+C   ++ +A  L  +M + G   D ++YN L++ +CK+
Sbjct: 385 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 444

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
             V +   L S   +KG  P +  Y ++ 
Sbjct: 445 GKVTDIEELKS---AKGTVPDLGVYTSIV 470



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 166/313 (53%), Gaps = 6/313 (1%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA A + +       P+   +N L+  L R G    A N+F+EM +     GV  +   V
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVV 152

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           ++NT+I G+C+ G +D A+ L  +M +  + PDV TY ++I+G C      +A+ +F +M
Sbjct: 153 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
             +G++P+ V F++++D  CK G  +    L   M  RGV P+  TYN +++G C    +
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A  + V M S G   D V+Y TLI+ YCK ++++ A+ +   M+++G+    VTY  L
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  +   A ++  EM    +  D  TY   ID  C+ G V   L L + +++   
Sbjct: 333 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392

Query: 495 ELNIVSYNCLIDG 507
           +  +V+YN +++G
Sbjct: 393 KPGVVTYNVIMNG 405



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 92  CIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           C F   L     PP    FN+L   L +     +  ++F  + S G+   + + + +I+ 
Sbjct: 101 CAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISG 160

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
            C+ G +     +  R+  +  TP+  T+ +LI+GLC   RI +A  +F K      +P+
Sbjct: 161 MCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 220

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
              +  LI+  C+ G     L L  EM     E GV  +P+ VTYN I++GLC+   +  
Sbjct: 221 AVVFTILIDAHCKKGDAETMLELHREMR----ERGV--RPDAVTYNAIVNGLCRARDLKS 274

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A  + ++M+   + PD VTYT++I G+C   + + A  +   M+ +GV  D VT++ ++ 
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            L K G+   A R+L  M+  G+ P+  TY  +ID +C    +    +L   M++ G   
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            VV+YN ++N +CK   ++ A  L + M++ G+ P  +TYN L  G
Sbjct: 395 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDG 440



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 120/233 (51%)

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           +L++ D  + P+   +  ++R      +   A+ +F EM  +GV+  VV+F+ ++  +C+
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G +D A  L   M   GV P+ YTY  LI G C   +I+ AR +F  M   G   + V 
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +  LI+ +CK  D E  L L+ EM  +G++P  VTYN +  GL     ++ A  +  EMR
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +  DT TY   IDG CK   +  A+E+ + +      L+ V+Y  LI GL
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/116 (19%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +++ ++     +     T L L K + + G  P + T+++++N FCK+G++ +  ++
Sbjct: 359 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 418

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           L  ++    +P+ +T+  L+ G C   ++ +   L +        PD+  Y +++ 
Sbjct: 419 LNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAKGTV---PDLGVYTSIVG 471


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 207/403 (51%), Gaps = 6/403 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V + N++   + K+K  + V SLF+ ++  G+ P++ T +ILIN  C  G +     +
Sbjct: 947  PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 1006

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L ++  + F P  VT+ +L+   C + R   A  L         E DV TYN  I+ LC 
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 1066

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               +  A  L ++M         +  PN VTYNT+I+G  KEG +  A ++F +M   ++
Sbjct: 1067 NHRSAKAYLLLKKMRKE------MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            +P+ VTY ++I G C+  D+ EA RL   M   G++ + VT+  +++ LCK+ K + A R
Sbjct: 1121 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 1180

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            LLE M    +      Y  LIDG C    +D A +L  +M  +G   DV++Y++LIN +C
Sbjct: 1181 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +  +++ A  +   M   G+    + Y+TL     +   V  A+K++  M  N   AD +
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300

Query: 465  TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            T N  +  LC+ G + EA +    +       N ++Y+C+I+G
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 1343



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 209/469 (44%), Gaps = 65/469 (13%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + ++N L     K   Y   + L   +   G+  D+ T+++ I+  C   R +  +++
Sbjct: 1017 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 1076

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L ++ +   +PN VT+ +LI G   E +I  AA +F +   F   P+  TYN LI G C 
Sbjct: 1077 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 1136

Query: 225  TGHTIVALNLFEEMANGNGEFGVV---------CKPNT--------------------VT 255
             G    AL L + M         V         CK                       + 
Sbjct: 1137 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 1196

Query: 256  YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
            Y  +IDGLCK G +D+A +L   M  + +NPDV+TY+S+I GFC   +   AK +   M 
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 1256

Query: 316  DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              G+  + + +S ++   C++G + +A ++  +M   G   + +T N L+   C   K+ 
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316

Query: 376  HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
             A K    M   G + + ++Y+ +IN Y    D   A S + +M+  G  P+  TY +L 
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 1376

Query: 436  LGLFE-------------IHQV----------------------ERALKLFDEMRRNHVA 460
             GL +             +H +                        A+ LFD+M +N+V 
Sbjct: 1377 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 1436

Query: 461  ADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDGL 508
             D+YTY++ + GLC+ G  + A+ LF  A+       N V Y CL+DGL
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 1485



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 195/393 (49%), Gaps = 29/393 (7%)

Query: 117  LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
            L K + YD+  S+ + L                   C+MG  S    + G ++ +    N
Sbjct: 873  LVKARMYDSAKSILRHL-------------------CQMGIGSKS--IFGALMDTYPLCN 911

Query: 177  AV--TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
            ++   F  LI+    E  I  A   F    +   +P V+T N ++  + +   T +  +L
Sbjct: 912  SIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL 971

Query: 235  FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            F EM++       +C PN  T+N +I+GLC EG + KA  L  +M++    P +VTY ++
Sbjct: 972  FREMSDKG-----IC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 1025

Query: 295  IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
            +  +C    +  A  L   M+ +G++ DV T++V +D LC N +  KA  LL+ M    +
Sbjct: 1026 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 1085

Query: 355  NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            +PN  TYNTLI+G+    KI  A ++F  M       + V+YN LI  +C   D EEAL 
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145

Query: 415  LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
            L   M + G++   VTY TL  GL +  + E A +L + MR N +      Y   IDGLC
Sbjct: 1146 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 1205

Query: 475  KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            K+G + EA++L   +       ++++Y+ LI+G
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLING 1238



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 190/416 (45%), Gaps = 9/416 (2%)

Query: 96   YMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            ++ R+H  P  V S  +N L     K+ +    ++LF ++    + PD YT+S L+   C
Sbjct: 1391 FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 1450

Query: 154  KMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G+      + G  + R    PN V +T L+ GL        A   F +       PD 
Sbjct: 1451 RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 1510

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
              +N +I+   R G  + A + F  M      +  VC PN  TYN ++ G  K+  + + 
Sbjct: 1511 VAFNAIIDSCSRRGQMMKANDFFSTM-----RWWGVC-PNLATYNILLHGFSKKQALLRY 1564

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
              L+  M  E I PD +T+ S+I G   +   +   +L  +M+ +G   D  TF++++++
Sbjct: 1565 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 1624

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              ++GKM KA  L+  M   GV P+  TYN + +G         +  +   M  NG +  
Sbjct: 1625 YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 1684

Query: 393  VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
               Y TLIN  C+  D++ A  L  EM + G     V  + +  GL    + E A+ + D
Sbjct: 1685 HAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 1744

Query: 453  EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             M R  +     T+   +   C+   + EAL+L   +     +L++V+YN LI G+
Sbjct: 1745 HMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 1800



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 215/482 (44%), Gaps = 24/482 (4%)

Query: 38   ISENEPSYPTTTSKLKESLRLTVKDRA--SLKKF-LKERCKSSGQ---GDINLITPNEAL 91
            IS NE +Y T  +   +  ++ V  +    + KF L   C +      G  ++    EAL
Sbjct: 1085 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 1144

Query: 92   CIFDYM----LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             + D+M    LR++       ++  L   L K++ ++    L +R+    +      +++
Sbjct: 1145 RLLDHMEAAGLRLNEV-----TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 1199

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI+  CK G +     ++G + +    P+ +T++SLI G C    I  A  +  +     
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               +   Y+TLI   C+ G+   A+ ++  M  NG+G     C       N ++  LC++
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC-------NVLVSSLCRD 1312

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            G + +A++    M    + P+ +TY  +I G+    D   A   F +M+  G  P   T+
Sbjct: 1313 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 1372

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
              ++  LCK G + +A + L  + +     ++  YNTL+   C +  +  A  LF  M  
Sbjct: 1373 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 1432

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVE 445
            N  + D  +Y++L+   C+      A+ L+   + +G + P  V Y  L  GL +    +
Sbjct: 1433 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 1492

Query: 446  RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             A   F+EM +     DT  +N  ID   + G +++A + F  +R      N+ +YN L+
Sbjct: 1493 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 1552

Query: 506  DG 507
             G
Sbjct: 1553 HG 1554



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 141/299 (47%), Gaps = 8/299 (2%)

Query: 210  PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            P VF  + LI    + G    A+  FE +    G  G   KP+  T N I+  + K+   
Sbjct: 914  PSVF--DLLIRVYLKEGMIDYAVETFELV----GLVGF--KPSVYTCNMILASMVKDKRT 965

Query: 270  DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +    LF +M D+ I P+V T+  +I G C   +  +A  L  +M + G  P +VT++ +
Sbjct: 966  ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 1025

Query: 330  MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
            ++  CK G+   A  L++ MI +G+  +  TYN  ID  C   +   A  L   M     
Sbjct: 1026 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 1085

Query: 390  MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              + V+YNTLIN + K   +  A  +++EM    + P  VTYN L  G   +   E AL+
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145

Query: 450  LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L D M    +  +  TY   ++GLCK      A  L   +R +   +  ++Y  LIDGL
Sbjct: 1146 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 1204



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 161/370 (43%), Gaps = 7/370 (1%)

Query: 87   PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
            P  A   F+ M++    P  V+ FN +    ++          F  +   G+ P++ T++
Sbjct: 1491 PKAAFYFFEEMMKKGTCPDTVA-FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 1549

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            IL++ F K   +     +   ++R    P+ +TF SLI GL           L  K  + 
Sbjct: 1550 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 1609

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
                D FT+N LIN    +G    A +L   M N  G F     P+  TYN I +GL K+
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFM-NTLGVF-----PDRDTYNHIFNGLNKK 1663

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
                ++  +  +M +  + P    Y ++I G C   D   A +L  EM   G     V  
Sbjct: 1664 SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 1723

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            S ++  L   GK + A  +L+ M+   + P   T+ TL+  +C   KI  A KL   ME 
Sbjct: 1724 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1783

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   DVV+YN LI   C N D   A  LY EM  + + P + TY  L   +   + + +
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843

Query: 447  ALKLFDEMRR 456
              KL  +++ 
Sbjct: 1844 GEKLLTDLQE 1853



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 6/320 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P ++++NIL    +K +     LSL+  +   G+FPD  T   LI    K G    G  +
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 1602

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            LG+++      +  TF  LI       ++ +A  L          PD  TYN + NGL +
Sbjct: 1603 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 1662

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  +  +  EM     E GV+  P    Y T+I+G+C+ G +  A +L  +M+    
Sbjct: 1663 KSAFRESTVVLHEML----ENGVI--PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                V  ++++RG  +     +A  +   M+   + P + TF+ +M   C++ K+ +A +
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  +M   G+  +   YN LI G C       A +L+  M       ++ +Y  L++   
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1836

Query: 405  KNKDVEEALSLYSEMLSKGI 424
               ++ +   L +++  +G+
Sbjct: 1837 AANNLIQGEKLLTDLQERGL 1856



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%)

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            I+  LC+ G   K+     +  +   N     ++ LI  Y     ID+A + F  +   G
Sbjct: 885  ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVG 944

Query: 389  CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                V + N ++    K+K  E   SL+ EM  KGI P V T+N L  GL     +++A 
Sbjct: 945  FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAG 1004

Query: 449  KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             L  +M  N       TYN  ++  CK G    A+EL   +     E ++ +YN  ID L
Sbjct: 1005 NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL 1064


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 208/430 (48%), Gaps = 26/430 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F+  L  +   P   ++N +         +D    L +R  + G  P +  ++ 
Sbjct: 72  DEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 130

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI---------MEAAA 198
           ++ C  K  RV     +   + R    PN  T+  LI  LC E ++         ME A 
Sbjct: 131 ILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAG 189

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           LF         P+V T N +I+ LC+      A ++FE M +       VC PN VT+++
Sbjct: 190 LF---------PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK------VCTPNAVTFSS 234

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +IDGL K G VD A  L+ KM D    P  + YTS+IR F       +  +++ EM+  G
Sbjct: 235 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 294

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD+   +  MD + K G+ +K   L   +   G  P+  +Y+ LI G       +   
Sbjct: 295 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETY 354

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LF +M+  GC+ D  +YN +I+ +CK+  V +A  L  EM  KG  PTVVTY ++  GL
Sbjct: 355 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +I +++ A  LF+E + N +  +   Y++ IDG  K G + EA  +   +       N+
Sbjct: 415 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474

Query: 499 VSYNCLIDGL 508
            ++NCL+D L
Sbjct: 475 YTWNCLLDAL 484



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 221/485 (45%), Gaps = 68/485 (14%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL IF+ M R   + P V ++NIL   L +    +  L +   +  AGLFP++ T +I+
Sbjct: 143 EALRIFEEMKR--DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 149 INCFCKM-----------------------------------GRVSHGFVVLGRILRSCF 173
           I+  CK                                    GRV   + +  ++L    
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            P A+ +TSLI+      R  +   ++ +     C PD+   NT ++ + + G T     
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320

Query: 234 LFEEMANGNGEF-----------GVV-------------------CKPNTVTYNTIIDGL 263
           LF E+ N +G             G+V                   C  +T  YN +IDG 
Sbjct: 321 LFREI-NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G V+KA +L  +MK +   P VVTY SVI G    +  +EA  LF E    G++ +V
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V +S ++D   K G++D+A  ++E ++ +G+ PN YT+N L+D     ++I+ A   F S
Sbjct: 440 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQS 499

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+   C  + ++Y+ LIN  C+ +   +A   + EM   G+KP  +TY T+  GL +   
Sbjct: 500 MKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGN 559

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A  LF   + N    D+ +YN  I+GL  +   ++A  LF   R     ++  +   
Sbjct: 560 ILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVV 619

Query: 504 LIDGL 508
           L+D L
Sbjct: 620 LLDAL 624



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 18/416 (4%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN----------CF 152
            P    S  ++  C+ K++       + + +      P    ++ILI             
Sbjct: 7   GPSSNISIELVANCV-KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVL 65

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK  R+     +  ++ ++   P A  + ++I G  +  +  EA  L  + +     P V
Sbjct: 66  CKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSV 125

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN ++  L +      AL +FEEM            PN  TYN +ID LC+EG ++ A
Sbjct: 126 IAYNCILTCLGKKRRVEEALRIFEEMKRD-------AVPNVPTYNILIDMLCREGKLNAA 178

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+   M+   + P+V+T   +I   C A    EA  +F  M D+   P+ VTFS ++D 
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L K G++D A  L E M+  G  P    Y +LI  +    + +   K++  M   GC  D
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +   NT ++   K  + E+  +L+ E+ + G  P   +Y+ L  GL +        +LF 
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M+      DT+ YN  IDG CKSG V +A +L   ++   +   +V+Y  +IDGL
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 414



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 181/393 (46%), Gaps = 15/393 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPV---SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  +++ ML     P  +   S     F C  K   +     ++K +   G  PD+  
Sbjct: 246 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH----KIYKEMVHTGCSPDLTL 301

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +  ++C  K G    G  +   I    F P+A +++ LI GL       E   LF   +
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGL 263
              C  D   YN +I+G C++G    A  L EEM   G+        P  VTY ++IDGL
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH-------PPTVVTYGSVIDGL 414

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K   +D+A  LF + K   I  +VV Y+S+I GF      +EA  +  E+M +G+ P+V
Sbjct: 415 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++D L K  ++++A    + M      PN  TY+ LI+G C   K + A   +  
Sbjct: 475 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 534

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M+  G   + ++Y T+I+   K  ++ EA  L+S   + G  P   +YN +  GL   ++
Sbjct: 535 MQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 594

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
              A  LF+E R       T T    +D L K+
Sbjct: 595 AMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 627



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 6/343 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P ++  N    C+ K    +   +LF+ +N+ G  PD  ++SILI+   K G  +  + +
Sbjct: 297 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 356

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       +   + ++I G C   ++ +A  L  + +V    P V TY ++I+GL +
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LFEE A  NG      K N V Y+++IDG  K G +D+A  +  ++  + +
Sbjct: 417 IDRLDEAYMLFEE-AKSNG-----IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 470

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V T+  ++     A + NEA   F  M D    P+ +T+S++++ LC+  K +KA  
Sbjct: 471 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 530

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + M   G+ PNT TY T+I G      I  A  LF   ++NG + D  SYN +I    
Sbjct: 531 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLS 590

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                 +A +L+ E   KG      T   L   L +   +E+A
Sbjct: 591 SANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 6/246 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +++   PP V ++  +   LAK    D    LF+   S G+  ++  +S LI+ F K+GR
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 454

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   ++++  +++   TPN  T+  L+  L     I EA   F   +   C P+  TY+ 
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LINGLCR      A   ++EM     + G+  KPNT+TY T+I GL K G + +A  LF 
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTITYTTMISGLAKAGNILEASGLFS 568

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           + K     PD  +Y ++I G   AN   +A  LF E   +G      T  V++D L K  
Sbjct: 569 RFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 628

Query: 338 KMDKAS 343
            +++A+
Sbjct: 629 CLEQAA 634


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 205/438 (46%), Gaps = 41/438 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L K        +L   ++ +GL P+I  +  L++ F K G+ +  F +
Sbjct: 311 PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDI 370

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL------ 218
           L  ++ +   PN + + +LI+GLC   ++  A+ L  +       PD FTYN L      
Sbjct: 371 LKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQ 430

Query: 219 -----------------------------INGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                        INGLC+ G +  A NL EEM +         
Sbjct: 431 QHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG------L 484

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KPN   Y  +I G  KEG +  A E   KM   N++PD+  Y S+I+G        EA+ 
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            + ++  +G+ PD  T+S ++   CK G ++KA +LL  M+  G+ PN  TY  L++GY 
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            ++  +    +  SM  +G   D   Y  +I    +++++E A  + +E+   G+ P + 
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            Y++L  GL +I  +E+A+ L DEM +  +      YN  IDG C+SG +  A  +F +I
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724

Query: 490 RDSKYELNIVSYNCLIDG 507
                  N V+Y  LIDG
Sbjct: 725 LAKGLVPNCVTYTALIDG 742



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 190/389 (48%), Gaps = 7/389 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+ I+   L +N       +L + + S GL P+ + ++ LI    K G +S     
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ ++   P+   + SLIKGL    R+ EA   + + +     PD FTY+ LI+G C+
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           TG+   A  L  +M N         KPN  TY  +++G  K    +K   +   M     
Sbjct: 571 TGNLEKADQLLRQMLNSG------LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   Y  VIR    + +   A  +  E+   G+ PD+  +S ++  LCK   M+KA  
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G+ P    YN LIDG+C +  I  AR +F S+ + G + + V+Y  LI+  C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN D+ +A  LY EML +GI P    YN L  G  +   +E+AL L +EM  N   A+  
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYANVS 803

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSK 493
            +N  + G CK G + E  +L   + D +
Sbjct: 804 LFNTLVHGFCKRGKLQETEKLLHVMMDRE 832



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 215/473 (45%), Gaps = 76/473 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++       K + +D    +F+ +       +  T++++I+  C+ G V   F  
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++    +P+A T+ +L+ GLC  SR+ EA AL  +      +P++  Y TL++G  +
Sbjct: 301 KEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMK 360

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A ++ +EM +         +PN + Y+ +I GLCK G + +A +L  +M    +
Sbjct: 361 EGKTAEAFDILKEMISAG------VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL 414

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY  +++G    +D + A  L  EM + G+ P+V ++ ++++ LC+NG+  +A  
Sbjct: 415 RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGN 474

Query: 345 LLELMIWRGVNPNTYT-----------------------------------YNTLIDGYC 369
           LLE MI  G+ PN +                                    YN+LI G  
Sbjct: 475 LLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLS 534

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +++ A + +  ++  G + D  +Y+ LI+ YCK  ++E+A  L  +ML+ G+KP   
Sbjct: 535 TVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNAD 594

Query: 430 TYNTLFLGLFEIHQVER-----------------------------------ALKLFDEM 454
           TY  L  G F+ +  E+                                   A  +  E+
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +N +  D + Y++ I GLCK   + +A+ L   +     E  IV YN LIDG
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 179/375 (47%), Gaps = 6/375 (1%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +  AG+ PD+YT+S  I   CK         V   + R     N VT+  +I GLC    
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA     +   +   PD FTY  L+NGLC+      A  L +EM+          KPN
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG------LKPN 347

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            V Y T++DG  KEG   +A ++  +M    + P+ + Y ++IRG C       A +L  
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM+  G++PD  T++ +M    +    D A  LL  M   G+ PN Y+Y  +I+G C   
Sbjct: 408 EMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNG 467

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +   A  L   M S G   +   Y  LI  + K  ++  A     +M    + P +  YN
Sbjct: 468 ESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYN 527

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +L  GL  + ++E A + + ++++  +  D +TY+  I G CK+G + +A +L R + +S
Sbjct: 528 SLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNS 587

Query: 493 KYELNIVSYNCLIDG 507
             + N  +Y  L++G
Sbjct: 588 GLKPNADTYTDLLEG 602



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 190/407 (46%), Gaps = 49/407 (12%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P      +L++ + K G V +   V+  +      P       L+K L       +A  L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR----ADAMEL 226

Query: 200 FTKHRVF----ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
             K + F       PDV+TY+T I   C+      A  +FEEM   +      C  N VT
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD------CAMNEVT 280

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I GLC+ G V++A     +M D  ++PD  TY +++ G C  +   EAK L  EM 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 316 DQGVQPDVVTFSVIMD-----------------------------------ELCKNGKMD 340
             G++P++V +  ++D                                    LCK G++ 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +AS+LL+ MI  G+ P+T+TYN L+ G+      D A +L   M ++G + +V SY  +I
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           N  C+N + +EA +L  EM+S+G+KP    Y  L +G  +   +  A +  ++M + +V 
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH 520

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            D + YN+ I GL   G + EA E +  ++      +  +Y+ LI G
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHG 567



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 181/357 (50%), Gaps = 9/357 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L+     +     + ++   GL PD +T+S LI+ +CK G +     +
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQL 580

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L S   PNA T+T L++G    +   + +++         +PD   Y  +I  L R
Sbjct: 581 LRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 640

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           + +  VA  +  E+       G+V  P+   Y+++I GLCK   ++KA  L  +M  E +
Sbjct: 641 SENMEVAFMVLTEVEKN----GLV--PDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +V Y ++I GFC + D + A+ +F  ++ +G+ P+ VT++ ++D  CKNG +  A  
Sbjct: 695 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFD 754

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES-NGCMHDVVSYNTLINWY 403
           L + M+ RG+ P+ + YN L  G   +D  D  + LF++ E  N    +V  +NTL++ +
Sbjct: 755 LYKEMLDRGIAPDAFVYNVLATG--CSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGF 812

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           CK   ++E   L   M+ + I P   T   +     +  ++  A ++F E+++   +
Sbjct: 813 CKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKAS 869



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 22/322 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L     K+  Y+ V S+ + +  +G  PD + + I+I    +   +   F+V
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + ++   P+   ++SLI GLC  + + +A  L  +      EP +  YN LI+G CR
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 710

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A N+F+ +       G+V  PN VTY  +IDG CK G +  A +L+ +M D  I
Sbjct: 711 SGDISRARNVFDSILAK----GLV--PNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   Y  +  G   A D  +A  L  EM ++G   +V  F+ ++   CK GK+ +  +
Sbjct: 765 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEK 823

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL +M+ R + PN  T   ++  +    K+  A ++F  ++            +L     
Sbjct: 824 LLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSL----- 878

Query: 405 KNKDVEEALSLYSEMLSKGIKP 426
                     L+++M++KG+ P
Sbjct: 879 ----------LFTDMINKGLIP 890



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 12/223 (5%)

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P    +  +    C A+ + +A  L  +M+     P +V  S+      +    D   R 
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASI------QRAIQDTDHR- 165

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
                 R  +P+T   + L+D Y  T  + +A ++ + M   G        N L+    +
Sbjct: 166 -----SRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR 220

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
              +E    L   M   GI P V TY+T      +    + A K+F+EMRR   A +  T
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YN  I GLC+SG V EA      + D     +  +Y  L++GL
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 323


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 215/421 (51%), Gaps = 9/421 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF-KRLNSAGLFPDIYTHS 146
           ++AL +FD M     +P  V+ +NIL     K K +   + L+ K L  + ++P++ TH+
Sbjct: 201 DDALELFDEMSERRVAPD-VTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHN 259

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+I+   K GRV     +  R+ ++    +  T++SLI GLC E  + +A ++F +    
Sbjct: 260 IMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVER 319

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               DV TYNT++ G CR G    +L L+  M   N         N V+YN +I GL + 
Sbjct: 320 KAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNS-------VNIVSYNILIKGLLEN 372

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A  ++  M  +    D  TY   I G C     N+A  +  E+  +G   DV  +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAY 432

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + I+D LCK  ++++AS L++ M   GV  N++  N LI G     ++  A  L   M  
Sbjct: 433 ASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGK 492

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NGC+  VVSYN LI   C+     EA +   EML  G+KP + TY+ L  GL    ++E 
Sbjct: 493 NGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIEL 552

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+L+ +  ++ +  D   +N  I GLC  G + +A+ +   +       N+V+YN L++
Sbjct: 553 ALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 507 G 507
           G
Sbjct: 613 G 613



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 226/487 (46%), Gaps = 66/487 (13%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ AL +F  M  +    P + S+N L     + K +  V SLF    +AG+ P++ T++
Sbjct: 94  PDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI   CK          L  + +  F P+  +++++I  L    ++ +A  LF +    
Sbjct: 154 VLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSER 213

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEE----------------MANGNGEFGVV-- 248
              PDV  YN LI+G  +     +A+ L+++                M +G  + G V  
Sbjct: 214 RVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273

Query: 249 C------------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           C            + +  TY+++I GLC EG VDKA+ +F ++ +     DVVTY +++ 
Sbjct: 274 CLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLG 333

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           GFC      E+  L+  +M+Q    ++V++++++  L +NGK+D+A+ +  LM  +G   
Sbjct: 334 GFCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  TY   I G C+   ++ A  +   +ES G   DV +Y ++I+  CK + +EEA +L 
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452

Query: 417 SEMLSKGIK-----------------------------------PTVVTYNTLFLGLFEI 441
            EM   G++                                   PTVV+YN L  GL E 
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEA 512

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
            +   A     EM  N +  D  TY+  + GLC+   +  ALEL+     S  E +++ +
Sbjct: 513 GKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMH 572

Query: 502 NCLIDGL 508
           N LI GL
Sbjct: 573 NILIHGL 579



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 196/412 (47%), Gaps = 31/412 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++ L I+D M + +     + +++ L   L    + D   S+F  L     F D+ T++ 
Sbjct: 272 DDCLKIWDRM-KQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNT 330

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  FC+ G++    + L RI+    + N V++  LIKGL    +I EA  ++       
Sbjct: 331 MLGGFCRCGKIKES-LELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCKP------- 251
              D  TY   I+GLC  G+   AL + +E+ +  G   V         +CK        
Sbjct: 390 YAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEAS 449

Query: 252 -------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                        N+   N +I GL ++  +  A  L   M      P VV+Y  +I G 
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGL 509

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C A  + EA     EM++ G++PD+ T+S+++  LC++ K++ A  L    +  G+ P+ 
Sbjct: 510 CEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDV 569

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             +N LI G C   K+D A  +  +ME   C  ++V+YNTL+  Y K +D   A  ++  
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGY 629

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           M   G++P +++YNT+  GL   H+V  A++ FD+ R + +    YT+N  +
Sbjct: 630 MYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 140/261 (53%), Gaps = 2/261 (0%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEA 307
           CK +     ++I    K    D+A ++F +M++     P + +Y +++  F  A  W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKV 133

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           + LF      GV P++ T++V++   CK  + +KA   L  M   G  P+ ++Y+T+I+ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIND 193

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS-KGIKP 426
              T K+D A +LF  M       DV  YN LI+ + K KD + A+ L+ ++L    + P
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 253

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V T+N +  GL +  +V+  LK++D M++N    D YTY++ I GLC  G V +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVF 313

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             + + K  +++V+YN ++ G
Sbjct: 314 NELVERKAFIDVVTYNTMLGG 334



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 6/193 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NIL   L +   +    +  K +   GL PD+ T+SIL+   C+  ++     +
Sbjct: 497 PTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALEL 556

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             + L+S   P+ +    LI GLC+  ++ +A  +        C  ++ TYNTL+ G  +
Sbjct: 557 WHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFK 616

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +  A  ++  M      + +  +P+ ++YNTI+ GLC    V  A E F   ++  I
Sbjct: 617 VRDSNRATVIWGYM------YKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGI 670

Query: 285 NPDVVTYTSVIRG 297
            P V T+  ++R 
Sbjct: 671 FPTVYTWNILVRA 683



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 35/153 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
           P + +++IL G L +++  +  L L+ +   +GL PD+  H+ILI+  C +G++      
Sbjct: 532 PDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTV 591

Query: 163 ---------------------------------VVLGRILRSCFTPNAVTFTSLIKGLCA 189
                                            V+ G + +    P+ +++ +++KGLC 
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCL 651

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             R+  A   F   R     P V+T+N L+  +
Sbjct: 652 CHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 202/382 (52%), Gaps = 6/382 (1%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L+L++ + + G+ P + +H+ ++  FCK G++S     L  +L+    P+ +++ +LI G
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYG 386

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
            C    I EA  L  + R      ++ TYNTLI+GLCR G    AL L E+M N      
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG---- 442

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               P+ VTY  +++G CK G +  AKE F +M    + PD   YT+ I G     D  +
Sbjct: 443 --IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A +L  EM+ +G  PDV+T++V ++ LCK G +++A  LL+ MI  G  P+  TY + + 
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            +     +   R++F  M S G    VV+Y  LI+ +  N  ++ A++ + EM  KG+ P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V+TYN L  G  ++ ++++A K F EM+   +  + YTY   I+  C  G   EAL L+
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +   +   +  ++  L+  L
Sbjct: 681 AQMLGKRIRPDSCTHGALLKKL 702



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 211/418 (50%), Gaps = 9/418 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           + L +F+ M+R +   P V + N +   L         L +++ +   G+ P + T++ +
Sbjct: 185 QCLLVFEKMMR-NRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTM 243

Query: 149 INCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ FCK G V     ++ ++  R C+ P+ VTF  LI GL  +  + +A  L  +     
Sbjct: 244 LHSFCKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAG 302

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
                +TYN LI G C+ G  + AL L+EEM            P   ++NTI+ G CKEG
Sbjct: 303 LRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG------VSPTVASHNTIMYGFCKEG 356

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A++    M  +N+ PD+++Y ++I GFC   +  EA  L  E+  + +  ++VT++
Sbjct: 357 KMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYN 416

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LC+ G ++ A +L E MI RG++P+  TY  L++G C    +  A++ F  M   
Sbjct: 417 TLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHV 476

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D  +Y   I    K  D  +A  L  EML+KG  P V+TYN    GL ++  +E A
Sbjct: 477 GLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEA 536

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            +L  +M R+    D  TY +F+    ++G + E  E+F  +        +V+Y  LI
Sbjct: 537 GELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 194/401 (48%), Gaps = 8/401 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL +++ M+    SP   S   I++G   + K  D    L   L    L PDI +++ L
Sbjct: 325 EALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKK-NLMPDIISYNTL 383

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC++G +   F++L  +     + N VT+ +LI GLC    +  A  L         
Sbjct: 384 IYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGI 443

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PDV TY  L+NG C+ G+ ++A   F+EM +      V   P+   Y   I G  K G 
Sbjct: 444 HPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH------VGLAPDQFAYTARIVGELKLGD 497

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             KA +L  +M  +   PDV+TY   + G C   +  EA  L  +M+  G  PD VT++ 
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            M    +NG + +   +   M+ RG  P   TY  LI  + L  ++D A   F+ M+  G
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + +V++YN LIN +CK + +++A   + EM  KGI P   TY  L      + + + AL
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +L+ +M    +  D+ T+   +  L K  + ++A++   ++
Sbjct: 678 RLYAQMLGKRIRPDSCTHGALLKKLDKD-YKVQAVQFIESL 717



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 182/347 (52%), Gaps = 6/347 (1%)

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
            +V  +++R+ F P+      ++K L  ++ +++A  ++     +   P V TYNT+++ 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+ G    AL+L  +M     E G  C P+ VT+N +I+GL K+G + +AK L  +M  
Sbjct: 247 FCKGGEVQRALDLVPKMQ----ERG--CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAK 300

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             +     TY  +I G+C      EA  L+ EM+ +GV P V + + IM   CK GKM  
Sbjct: 301 AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSD 360

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A + L  M+ + + P+  +YNTLI G+C    I  A  L   +       ++V+YNTLI+
Sbjct: 361 ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLID 420

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+  D+E AL L  +M+++GI P VVTY  L  G  ++  +  A + FDEM    +A 
Sbjct: 421 GLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAP 480

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D + Y   I G  K G   +A +L   +    +  ++++YN  ++GL
Sbjct: 481 DQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527



 Score = 38.9 bits (89), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 48/98 (48%)

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           + L ++ +M+     P V   N +   L + + + +AL+++  M    +     TYN  +
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              CK G V  AL+L   +++     + V++N LI+GL
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGL 282


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 206/407 (50%), Gaps = 10/407 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F  +  +    P + + N +   L K +       LF  +   G+ P + T++ 
Sbjct: 128 DEALYVFRRLWTL----PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNT 183

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN     G V+    +  +++     PN +T+TS+I  LC E  I +A  LF   +   
Sbjct: 184 LINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAG 243

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+ +TYN L++G C+      A  L++E+ N     G++  PN V + T+IDG CK  
Sbjct: 244 MRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS----GLI--PNAVVFTTLIDGFCKAK 297

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +AK++F  M    + P V  Y S++ G   + D  EA  L+ EM   G+ PD  T S
Sbjct: 298 RFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCS 357

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  LC  G++  A+R LE +   GVN N   YN LID YC    ++ A      M   
Sbjct: 358 IVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEV 417

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VVSY++LI+ + K   ++ A+++Y+EM++KGI+P VVTY  L  G  +   ++ A
Sbjct: 418 GVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAA 477

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            +   EM  N ++ +  T +  +DGLC+   V +A+         KY
Sbjct: 478 FRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKY 524



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 186/377 (49%), Gaps = 27/377 (7%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF  +  AG+ P+ YT+++L++  C+   V+  FV+   +L S   PNAV FT+LI G C
Sbjct: 235 LFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFC 294

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              R  EA  +F     F   P V  YN+L++G  R+G    AL+L++EM       G+ 
Sbjct: 295 KAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMT----RLGLC 350

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P+  T + ++ GLC  G +  A      ++++ +N +   Y ++I  +C   +  EA 
Sbjct: 351 --PDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEAL 408

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
                M + GV+P+VV++S ++D   K GKM  A  +   M+ +G+ PN  TY  LI G+
Sbjct: 409 ATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH 468

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK--- 425
                ID A +    M  NG   + ++ + L++  C+   V++A+    E    GIK   
Sbjct: 469 AKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVME--HSGIKYSD 526

Query: 426 ----------------PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
                           P    Y TL  GL+   Q   A KLF  MR++ + +D++TY   
Sbjct: 527 IHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLL 586

Query: 470 IDGLCKSGFVLEALELF 486
           I G C  G+VL A+ L+
Sbjct: 587 IRGQCMLGYVLNAMMLY 603



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 207/406 (50%), Gaps = 9/406 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S  P  +  +L   L++    D  L +F+RL +    P +   + +++   K  R    +
Sbjct: 107 SASPAPALGVLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAW 163

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +LR    P+ VT+ +LI     +  + +A  ++ +      +P+V TY ++I  L
Sbjct: 164 ELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVL 223

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C  G    A  LF+ M     E G+  +PN  TYN ++ G C+   V+ A  L+ ++ + 
Sbjct: 224 CEEGCIGDAERLFDAMK----EAGM--RPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS 277

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P+ V +T++I GFC A  ++EAK +F +M   GV P V  ++ +MD   ++G   +A
Sbjct: 278 GLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEA 337

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L + M   G+ P+ +T + ++ G C   +I  A +    +  +G   +  +YN LI+ 
Sbjct: 338 LSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDE 397

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           YC+N ++EEAL+  + M   G++P VV+Y++L  G  ++ +++ A+ ++ EM    +  +
Sbjct: 398 YCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPN 457

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY   I G  K+G +  A    + + ++    N ++ + L+DGL
Sbjct: 458 VVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGL 503


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 215/453 (47%), Gaps = 33/453 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL----NSAGLFPDIY 143
           + AL +F  +  MH   P   + N+L   L K+   D  L L+ ++    +  G   D Y
Sbjct: 147 DRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNY 206

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T SI++   C +G++  G  ++      C  P+ V +  +I G C +  +  A     + 
Sbjct: 207 TTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNEL 266

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFGVV 248
           ++    P V TY  LING C+ G       L  EMA               +   ++G+V
Sbjct: 267 KMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLV 326

Query: 249 --------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
                         C P+  TYN +I+  CK G +++A EL  K K+  + P+  +YT +
Sbjct: 327 TEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPL 386

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +  +C   D+ +A  +   + + G + D+V++   +  +   G++D A  + E M+ +GV
Sbjct: 387 MHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGV 446

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+   YN L+ G C   +I   + L   M       DV  + TLI+ + +N +++EA+ 
Sbjct: 447 FPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIK 506

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++  ++ KG+ P +V YN +  G  +  ++  AL   +EM   H A D YTY+  IDG  
Sbjct: 507 IFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYV 566

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K   +  AL++F  +   K++ N+++Y  LI+G
Sbjct: 567 KQHDMSSALKMFGQMMKHKFKPNVITYTSLING 599



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 6/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+M    P V ++  L     K   ++ V  L   + + GL  ++   + +I+   K G 
Sbjct: 266 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGL 325

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V+    +L R+      P+  T+  +I   C   RI EA  L  K +     P+ F+Y  
Sbjct: 326 VTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTP 385

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++  C+ G  + A  +   +A    E G   K + V+Y   I G+   G +D A  +  
Sbjct: 386 LMHAYCKKGDYVKASGMLFRIA----EIGE--KSDLVSYGAFIHGVVVAGEIDVALMVRE 439

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           KM ++ + PD   Y  ++ G C        K L  EM+D+ VQPDV  F+ ++D   +NG
Sbjct: 440 KMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNG 499

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++D+A ++ +++I +GV+P    YN +I G+C   K+  A      M S     D  +Y+
Sbjct: 500 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYS 559

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           T+I+ Y K  D+  AL ++ +M+    KP V+TY +L  G  +   + RA K+F  M+  
Sbjct: 560 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSF 619

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +  TY   + G  K+G    A  +F  +  +    N  +++ LI+GL
Sbjct: 620 DLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 196/429 (45%), Gaps = 55/429 (12%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           + +R+   G  PDI T++I+IN  CK GR+     +L +       PN  ++T L+   C
Sbjct: 332 MLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYC 391

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            +   ++A+ +  +      + D+ +Y   I+G+   G   VAL + E+M     E GV 
Sbjct: 392 KKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM----EKGVF 447

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P+   YN ++ GLCK+G +   K L  +M D N+ PDV  + ++I GF    + +EA 
Sbjct: 448 --PDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAI 505

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           ++F  ++ +GV P +V ++ ++   CK GKM  A   L  M      P+ YTY+T+IDGY
Sbjct: 506 KIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGY 565

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
                +  A K+F  M  +    +V++Y +LIN +CK  D+  A  ++S M S  + P V
Sbjct: 566 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNV 625

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT----------------------- 465
           VTY TL  G F+  + ERA  +F+ M  N    +  T                       
Sbjct: 626 VTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDS 685

Query: 466 --------------------------YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                                     YN+ I  LCK G V  A  L   +    + ++ V
Sbjct: 686 KENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSV 745

Query: 500 SYNCLIDGL 508
            +  L+ GL
Sbjct: 746 CFTALLHGL 754



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 20/329 (6%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D  L + +++   G+FPD   ++IL++  CK GR+    ++L  +L     P+   F +L
Sbjct: 432 DVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATL 491

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I G      + EA  +F        +P +  YN +I G C+ G    AL+   EM +   
Sbjct: 492 IDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNS--- 548

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
              V   P+  TY+T+IDG  K+  +  A ++F +M      P+V+TYTS+I GFC   D
Sbjct: 549 ---VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 605

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
              A+++F  M    + P+VVT++ ++    K GK ++A+ + ELM+  G  PN  T++ 
Sbjct: 606 MIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHY 665

Query: 364 LIDGYCLT----------DKIDHARKL----FVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           LI+G   T          D  ++ R L    F  M  +G    + +YN++I   CK+  V
Sbjct: 666 LINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTV 725

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           + A  L ++ML+KG     V +  L  GL
Sbjct: 726 DTAQLLLTKMLTKGFLIDSVCFTALLHGL 754



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 15/340 (4%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V  +SL+K L +     E   +    +    +P    ++ LI     +G    AL LF
Sbjct: 94  DGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLF 153

Query: 236 ---EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM--KDENINPDVVT 290
               EM N        C P  V  N +++GL K G VD A +L+ KM   D+     V  
Sbjct: 154 HTVREMHN--------CFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDN 205

Query: 291 YTS--VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           YT+  +++G C      E +RL      +   P VV +++I+D  CK G +  A+R L  
Sbjct: 206 YTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNE 265

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           +  +GV P   TY  LI+G+C   + +   +L   M + G   +V  +N +I+   K   
Sbjct: 266 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGL 325

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V EA  +   M   G  P + TYN +     +  ++E A +L ++ +   +  + ++Y  
Sbjct: 326 VTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTP 385

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   CK G  ++A  +   I +   + ++VSY   I G+
Sbjct: 386 LMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGV 425



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +NIL   L K      +  L   +    + PD+Y  + LI+ F + G +     +
Sbjct: 448 PDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKI 507

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              I+R    P  V + ++IKG C   ++ +A +   +       PD +TY+T+I+G  +
Sbjct: 508 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVK 567

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL +F +M           KPN +TY ++I+G CK+  + +A+++F  MK  ++
Sbjct: 568 QHDMSSALKMFGQMMKHK------FKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDL 621

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF------------------ 326
            P+VVTYT+++ GF  A     A  +F  M+  G  P+  TF                  
Sbjct: 622 VPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIE 681

Query: 327 ---------SVIMDE----------------------LCKNGKMDKASRLLELMIWRGVN 355
                    S+I+D                       LCK+G +D A  LL  M+ +G  
Sbjct: 682 EKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFL 741

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            ++  +  L+ G C   K    R +     +   +   V Y+  ++ Y     + EA
Sbjct: 742 IDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEA 798



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 15/273 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL   + M  +H +P   +   ++ G   K     + L +F ++      P++ T++ L
Sbjct: 538 DALSCLNEMNSVHHAPDEYTYSTVIDG-YVKQHDMSSALKMFGQMMKHKFKPNVITYTSL 596

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN FCK   +     V   +      PN VT+T+L+ G     +   A ++F    +  C
Sbjct: 597 INGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGC 656

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV-----------TYN 257
            P+  T++ LINGL  T  + V   L EE  +   E  ++    T+            YN
Sbjct: 657 LPNDATFHYLINGLTNTATSPV---LIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYN 713

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           ++I  LCK G VD A+ L  KM  +    D V +T+++ G C+     E + +    +++
Sbjct: 714 SVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNK 773

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
                 V +S+ +D+    G++ +AS +L+ ++
Sbjct: 774 IELQTAVKYSLTLDKYLYQGRLSEASVILQTLV 806



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D V++++L+      +   E   +   M ++ +KPT   ++ L L   E   ++RAL
Sbjct: 91  CSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRAL 150

Query: 449 KLFDEMRRNHVAADTYTYNN-FIDGLCKSGFVLEALELF 486
           +LF  +R  H    T+  +N  ++GL KSG V  AL+L+
Sbjct: 151 QLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLY 189


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 43/421 (10%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF----------------------- 139
           S P VSSFNIL    A    ++ V +L + + S G+                        
Sbjct: 124 SEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAV 183

Query: 140 ------------PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
                       P ++T+++L++  CK  +V     V   ++R  + P+ + ++SLI GL
Sbjct: 184 SYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGL 243

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
               R+ EA  L          P    Y +++ GLC+ G    A+   +EM        V
Sbjct: 244 SKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV 303

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
                  TY+ I+ G    G V+KA  +  +M D +  PD ++YT  I          EA
Sbjct: 304 ------DTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEA 357

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           +++F  M+++G +PD+ T+ +I+D  CK G M  A+ +L LM    V PN Y Y  ++DG
Sbjct: 358 EKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 417

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG--IK 425
           +  + +++ A +L+  +  +G +   V+YNT+IN  CK K ++EAL L  EM  +   ++
Sbjct: 418 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELE 477

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P++VTY+ +  GL ++   ERA  L  EM  N V  D +TY + I  L  +G V  A+EL
Sbjct: 478 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 537

Query: 486 F 486
            
Sbjct: 538 L 538



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 184/374 (49%), Gaps = 8/374 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ +L   L K    +    +F+ +   G  PDI  +S LI+   K GRV     +
Sbjct: 196 PTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL 255

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++     P AV +TS++ GLC   RI EA     + R     P V TY+ ++ G   
Sbjct: 256 VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 315

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  + EEMA+ +      C P+T++Y   I+ L   G  ++A+++F  M ++  
Sbjct: 316 MGKVEKAFAVMEEMADRD------CAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGC 369

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ TY  +I  FC       A  +   M    V+P+   +++IMD   K+ ++++A  
Sbjct: 370 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 429

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME--SNGCMHDVVSYNTLINW 402
           L + ++  G+ P+T TYNT+I+  C   K+D A +L   M+         +V+Y+ +I+ 
Sbjct: 430 LYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHG 489

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
             K    E A  L +EM+  G+ P   TY +L   L    +V RA++L +EM +  +  D
Sbjct: 490 LGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 549

Query: 463 TYTYNNFIDGLCKS 476
            +TY   +  LC+S
Sbjct: 550 DHTYGTLVQILCRS 563



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 165/352 (46%), Gaps = 10/352 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M+   P P  V+  +I+ G L K       +   + +    L P + T+S 
Sbjct: 250 DEARKLVDLMVARGPPPTAVAYTSIVAG-LCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 308

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  +  MG+V   F V+  +      P+ +++T  I+ L +  R  EA  +F       
Sbjct: 309 IVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 368

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PD+ TY  +I+  C+ G    A ++   M           KPN   Y  I+DG  K  
Sbjct: 369 CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA------AVKPNRYIYTMIMDGFVKSS 422

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM--DQGVQPDVVT 325
            +++A EL+ ++  + I P  VTY +VI   C     +EA  L  EM    + ++P +VT
Sbjct: 423 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 482

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S+I+  L K G  ++A  LL  MI  GV P+ +TY +LI       K+  A +L   M 
Sbjct: 483 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             G   D  +Y TL+   C++ DV+ A  L  EM+  G  P   T+  +  G
Sbjct: 543 KAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKG 593



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 151/338 (44%), Gaps = 9/338 (2%)

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R  F+    T  SL+  L     + +A   F        EP+V ++N L+ G        
Sbjct: 89  RPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSS---ISEPNVSSFNILLRGFAARDDFE 145

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           V   L  EM +           N  T+  I+  LC    +DKA   F  +      P + 
Sbjct: 146 VVNALLREMKSRG------ITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLF 199

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TYT ++ G C A+    A  +F EM+ +G +PD++ +S ++D L K G++D+A +L++LM
Sbjct: 200 TYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 259

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + RG  P    Y +++ G C   +I  A K    M        V +Y+ ++  Y     V
Sbjct: 260 VARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKV 319

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A ++  EM  +   P  ++Y      L+ I + E A K+F+ M       D +TY   
Sbjct: 320 EKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 379

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ID  CK G +  A  + R +  +  + N   Y  ++DG
Sbjct: 380 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 417



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 142/291 (48%), Gaps = 6/291 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G I +    +A  + + M     +P  +S + +    L      +    +F+ +   G  
Sbjct: 312 GYIGMGKVEKAFAVMEEMADRDCAPDTIS-YTMFIEALYSIGRREEAEKVFETMVEKGCK 370

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD++T+ I+I+ FCK G ++    VL  + ++   PN   +T ++ G    SR+ EA  L
Sbjct: 371 PDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 430

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           + +       P   TYNT+IN LC+      AL L  EM     E     +P+ VTY+ I
Sbjct: 431 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL----EPSIVTYSMI 486

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I GL K G  ++A +L  +M D  + PD  TYTS+I+    A   + A  L  EM+  G+
Sbjct: 487 IHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 546

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
            PD  T+  ++  LC++  +D A  LL+ M+  G  PN +T+  +  G+ L
Sbjct: 547 FPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRL 596


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 219/423 (51%), Gaps = 14/423 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + + M+      P   ++N +   ++K      V  L   +   GL P+  T++ L
Sbjct: 222 DALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNL 281

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  +CK+G +   F ++  + ++   P+  T+  LI G+C    I E   L    +    
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKL 341

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PDV TYNTLI+G    G ++ A  L E+M N     GV  KPN VT+N  +  LCKE  
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEAKKLMEQMEND----GV--KPNQVTHNISLKWLCKE-- 393

Query: 269 VDKAKELFLKMKD----ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +K +E+  K+K+       +PD+VTY ++I+ +    D + A  +  EM  +G++ + +
Sbjct: 394 -EKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T + I+D LCK  K+D+A  LL+    RG   +  TY TLI GY   +K++ A +++  M
Sbjct: 453 TLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEM 512

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +       V ++N+LI   C +   E A+  + E+   G+ P   T+N++ LG  +  +V
Sbjct: 513 KRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRV 572

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A + ++E  ++    D YT N  ++GLCK G   +AL  F  +   + E++ V+YN +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTM 631

Query: 505 IDG 507
           I  
Sbjct: 632 ISA 634



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 213/418 (50%), Gaps = 9/418 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINC 151
           +FD M+++  S   V +FN+L          +  L + +R+ S   + PD  T++ ++  
Sbjct: 191 VFDDMVKIGVSLD-VKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKA 249

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
             K GR+S    +L  + R+   PN VT+ +L+ G C    + EA  +    +     PD
Sbjct: 250 MSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPD 309

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           + TYN LING+C  G     L L + M +      +  +P+ VTYNT+IDG  + G   +
Sbjct: 310 LCTYNILINGVCNAGSIREGLELMDVMKS------LKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIM 330
           AK+L  +M+++ + P+ VT+   ++  C      E  R   E+++  G  PD+VT+  ++
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLI 423

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
               K G +  A  ++  M  +G+  NT T NT++D  C   K+D A  L  S    G +
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYI 483

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D V+Y TLI  Y + + VE+A  ++ EM    I PTV T+N+L  GL    + E A++ 
Sbjct: 484 VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEK 543

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FDE+  + +  D  T+N+ I G CK G V +A E +       ++ +  + N L++GL
Sbjct: 544 FDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 192/436 (44%), Gaps = 66/436 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NIL   +         L L   + S  L PD+ T++ LI+   ++G       +
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL 367

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLC 223
           + ++      PN VT    +K LC E +  E      +   +    PD+ TY+TLI    
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD------------- 270
           + G    AL +  EM    G+ G+  K NT+T NTI+D LCKE  VD             
Sbjct: 428 KVGDLSGALEMMREM----GQKGI--KMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 271 ----------------------KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
                                 KA E++ +MK   I P V T+ S+I G C+      A 
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM 541

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             F E+ + G+ PD  TF+ I+   CK G+++KA       I     P+ YT N L++G 
Sbjct: 542 EKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C     + A   F ++ +   + D V+YNT+I+ +CK+K ++EA  L SEM  K ++P  
Sbjct: 602 CKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDR 660

Query: 429 VTYNTLFLGLFEIHQVERALKL-------FDEMRRN----------------HVAADTYT 465
            TYN++   L E  ++  A +L       F  M+RN                 +  +   
Sbjct: 661 FTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIA 720

Query: 466 YNNFIDGLCKSGFVLE 481
           Y++ I+ LC  G + E
Sbjct: 721 YSDVINELCSRGRLKE 736



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 17/306 (5%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK--EG 267
           P    ++  ++     G   VAL +F++M        +  KPN +T NT++ GL +    
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIR------LKLKPNLLTCNTLLIGLVRYPSS 182

Query: 268 F-VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
           F +  A+E+F  M    ++ DV T+  ++ G+C      +A  +   M+ +  V PD VT
Sbjct: 183 FSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVT 242

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ I+  + K G++     LL  M   G+ PN  TYN L+ GYC    +  A ++   M+
Sbjct: 243 YNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
               + D+ +YN LIN  C    + E L L   M S  ++P VVTYNTL  G FE+    
Sbjct: 303 QTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSL 362

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD----SKYELNIVSY 501
            A KL ++M  + V  +  T+N  +  LCK     +  E+ R +++      +  +IV+Y
Sbjct: 363 EAKKLMEQMENDGVKPNQVTHNISLKWLCKEE---KREEVTRKVKELVEMHGFSPDIVTY 419

Query: 502 NCLIDG 507
           + LI  
Sbjct: 420 HTLIKA 425


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++NI+   L K    D   SL   + + G+ P++ +++ +I   C+ G +     V   +
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L     PN VT++ LI G   +    +A  LF +       P  FT+NT+INGLC+ G  
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A +  +       E G +  P+ +TYN+I+DG  KEG +D A  ++ +M +  ++P+V
Sbjct: 551 SEARDKLKNFL----EEGFI--PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 604

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYTS+I GFC +N  + A +   EM ++G++ DV  +S ++D  CK   M+ A  L   
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 664

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G++PN   YN++I G+   + ++ A   +  M ++    D+ +Y TLI+   K   
Sbjct: 665 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 724

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  A  LY EMLSKGI P ++T++ L  GL    Q+E A K+ +EM R ++      YN 
Sbjct: 725 LVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNT 784

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G  + G + EA  L   + D     + V+Y+ LI+G
Sbjct: 785 LIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 208/419 (49%), Gaps = 40/419 (9%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D+ L+LF ++   GLFP+  T+S+LI   C  G +     +  ++  +   P+     SL
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 184 IKG----------------------------------LCAESRIMEAAALFTKHRVFACE 209
           ++G                                  LC   ++ EA +L          
Sbjct: 402 LRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV 461

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V +YN +I G CR G+  +A ++F +M           KPN VTY+ +IDG  K+G  
Sbjct: 462 PNVVSYNDMILGHCRKGNMDMASSVFSDM------LARDLKPNVVTYSILIDGNFKKGDS 515

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +KA +LF +M   NI P   T+ ++I G C     +EA+      +++G  P  +T++ I
Sbjct: 516 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 575

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D   K G +D A  +   M   GV+PN  TY +LI+G+C +++ID A K    M   G 
Sbjct: 576 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL 635

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             DV +Y+ LI+ +CK +D+E A  L+ E+L  G+ P  + YN++  G  +++ +E AL 
Sbjct: 636 ELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALV 695

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + +M  + +  D  TY   IDGL K G ++ A +L+  +       +I++++ L++GL
Sbjct: 696 WYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 754



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 192/385 (49%), Gaps = 7/385 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M+     P  VS  +++ G   K  + D   S+F  + +  L P++ T+SI
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKG-NMDMASSVFSDMLARDLKPNVVTYSI 504

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K G       +  ++L     P   TF ++I GLC   ++ EA           
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   TYN++++G  + G+   AL ++ EM     EFGV   PN VTY ++I+G CK  
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMC----EFGV--SPNVVTYTSLINGFCKSN 618

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +   +M+++ +  DV  Y+++I GFC   D   A+ LF E+++ G+ P+ + ++
Sbjct: 619 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN 678

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++        M+ A    + MI   +  +  TY TLIDG     ++  A  L++ M S 
Sbjct: 679 SMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK 738

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+++++ L+N  C    +E A  +  EM  K + P+V+ YNTL  G F    ++ A
Sbjct: 739 GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEA 798

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDG 472
             L DEM    +  D  TY+  I+G
Sbjct: 799 FTLHDEMLDRGLVPDDVTYDILING 823



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 183/431 (42%), Gaps = 29/431 (6%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGR 157
           ++H    P+S  +++   L       + L  FKR  +  G    +  + +L++   +   
Sbjct: 50  QIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPE 109

Query: 158 V-SHGFVVLGRILRSCFTPNAVTFTS--------------------LIKGLCAESRIMEA 196
              H   +L R +     P+ V F                      L+      +RI  A
Sbjct: 110 THGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENA 169

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
              F         P V   N L+  L R        +L+ +M    G +G     +  T 
Sbjct: 170 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV-LRGIYG-----DHFTV 223

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + ++    KEG V++A+E F + K+  +  D   Y+ +I+  C   + N    L  EM +
Sbjct: 224 HVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKE 283

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G  P   TF+ ++      G M +A RL E MI  G   N     +L+ GYC    +D 
Sbjct: 284 RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDS 343

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A  LF  +  +G   + V+Y+ LI   C + ++E+A  LY++M   GI P+V   N+L  
Sbjct: 344 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 403

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  +    E A KLFDE     V A+ +TYN  +  LCK G + EA  L   + +     
Sbjct: 404 GYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462

Query: 497 NIVSYNCLIDG 507
           N+VSYN +I G
Sbjct: 463 NVVSYNDMILG 473


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 196/365 (53%), Gaps = 10/365 (2%)

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+++ILI   C+   V    V+L  +L+   +PN  T+T LI+GLC E RI +A  L  +
Sbjct: 254 YSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDE 313

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  P V+TYN +I+G C++G    AL + + +  GNG     C P+  TYN++I G
Sbjct: 314 MPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI-KTLMEGNG-----CNPDDWTYNSLIHG 367

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LC  G  D+A+EL         +P V+T+T++I G+C A   ++A R+   M+    + D
Sbjct: 368 LCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLD 426

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +  + V++  L K  ++ +A   L  +   G++PN   Y ++ID YC   K+  A ++F 
Sbjct: 427 LQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             E  GC  +  +Y++LI    +++ + +A++L ++M   GI P V+TY TL  G  + H
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + + A +LF+ M +N +  D   YN   D LCKSG    A E +  +      L  V+Y 
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVKKGVVLTKVTYT 603

Query: 503 CLIDG 507
            L+DG
Sbjct: 604 SLVDG 608



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 48/456 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  + D M R     P V ++N +     K+      L +   +   G  PD +T++ 
Sbjct: 305 HDARVLLDEMPR-RGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNS 363

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA----------- 196
           LI+  C  G+      +L   +   F+P  +TFT++I G C   +I +A           
Sbjct: 364 LIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK 422

Query: 197 ------------AALFTKHR----------VFA--CEPDVFTYNTLINGLCRTGHTIVAL 232
                       + L  KHR          +FA    P+V  Y ++I+  C+ G    AL
Sbjct: 423 CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAAL 482

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +F+ +    G     C+PN  TY+++I GL ++  + KA  L  KM+++ I P V+TYT
Sbjct: 483 EVFK-LTEHEG-----CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYT 536

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           ++I+G C  ++++ A RLF EMM+Q G+ PD   ++V+ D LCK+G+ ++A   L   + 
Sbjct: 537 TLIQGQCKKHEFDNAFRLF-EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VK 592

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +GV     TY +L+DG+      + A  L   M + GC  D  +Y+ L+   CK K + E
Sbjct: 593 KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNE 652

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           ALS+  +M  +G+K  +V Y  +   + +  + + A  +F+EM  +       TY  FI 
Sbjct: 653 ALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFIS 712

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             CK G + EA  L   +  +    ++V+YN  I+G
Sbjct: 713 SYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFING 748



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 9/360 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++ +L   L K             + + GL P++  ++ +I+ +CK+G+V     V  
Sbjct: 427 LQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
                   PNA T++SLI GL  + ++ +A AL TK +     P V TY TLI G C+  
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  LFE M   NG       P+   YN + D LCK G  ++A    +K   + +  
Sbjct: 547 EFDNAFRLFEMMEQ-NG-----LTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVL 597

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             VTYTS++ GF  A +   A  L  +M+++G + D  T+SV++  LCK  K+++A  +L
Sbjct: 598 TKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSIL 657

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  RGV  N   Y  +I       K DHA+ +F  M S+G     ++Y   I+ YCK 
Sbjct: 658 DQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKI 717

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +EEA  L  EM   G+ P VVTYN    G   +  ++ A      M       + +TY
Sbjct: 718 GRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTY 777



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 188/405 (46%), Gaps = 9/405 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG-FV 163
           P   ++N +     K          F+ L  +G+  D YT + L+  +C+ G +    ++
Sbjct: 181 PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWL 240

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++   L  C   N  ++T LI+GLC    + EA  L        C P++ TY  LI GLC
Sbjct: 241 LMMMPLMGC-RRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLC 299

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A  L +EM       GVV  P+  TYN +IDG CK G +  A  +   M+   
Sbjct: 300 KEGRIHDARVLLDEMP----RRGVV--PSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNG 353

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            NPD  TY S+I G C     +EA+ L    + +G  P V+TF+ I++  CK  K+D A 
Sbjct: 354 CNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDAL 412

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R+  +MI      +   Y  LI       ++  A+     + +NG   +VV Y ++I+ Y
Sbjct: 413 RVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAY 472

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   V  AL ++     +G +P   TY++L  GL +  ++ +A+ L  +M+ + +    
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   I G CK      A  LF  +  +    +  +YN L D L
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 577



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 187/452 (41%), Gaps = 66/452 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K   +D    LF+ +   GL PD   +++L +  CK GR    +  
Sbjct: 530 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 589

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   ++       VT+TSL+ G         AAAL  K     C+ D  TY+ L+  LC+
Sbjct: 590 L---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK 646

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++ ++M       GV  K N V Y  II  + KEG  D AK +F +M     
Sbjct: 647 QKKLNEALSILDQMT----LRGV--KGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH 700

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV---------------- 328
            P  +TYT  I  +C      EA  L  EM   GV PDVVT++V                
Sbjct: 701 KPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFS 760

Query: 329 ----IMDELCKNG-------------------------------KMDKASRLLELMIWRG 353
               ++D  C+                                 K+D   +LLE M+  G
Sbjct: 761 TLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHG 820

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           +NP   TY+++I G+C   +++ A  L   M       +   Y  LI   C  K  E+A 
Sbjct: 821 LNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAA 880

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF---DEMRRNHVAADTYTYNNFI 470
           S  + M+  G +P + +Y+ L  GL +    ++A  LF    EM  NH   +   +    
Sbjct: 881 SFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNH---NEVAWKILN 937

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           DGL K+G V    +L  A+ +    ++  +Y+
Sbjct: 938 DGLLKAGHVDICSQLLSAMENRHCRIDSETYS 969



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 185/420 (44%), Gaps = 25/420 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++ L   L +++     ++L  ++   G+ P + T++ LI   CK     + F +
Sbjct: 495 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 554

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + ++  TP+   +  L   LC   R  EA +   K  V   +    TY +L++G  +
Sbjct: 555 FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTK---VTYTSLVDGFSK 611

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+T  A  L E+M N        CK ++ TY+ ++  LCK+  +++A  +  +M    +
Sbjct: 612 AGNTEFAAALIEKMVNEG------CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGV 665

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++V YT +I         + AK +F EM+  G +P  +T++V +   CK G++++A  
Sbjct: 666 KGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGH 725

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  M   GV P+  TYN  I+G      +D A      M    C  +  +Y  L+  + 
Sbjct: 726 LIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFL 785

Query: 405 KNK----------------DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           K                   ++    L   M+  G+ PT VTY+++  G  +  ++E A 
Sbjct: 786 KMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEAC 845

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L D M    ++ +   Y   I   C      +A      + +  ++ ++ SY+ LI GL
Sbjct: 846 VLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGL 905



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN  +  L +    +   +L+ ++  E + PD VTY ++I  +C       A R F  + 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G++ D  T + ++   C+ G + KA  LL +M   G   N Y+Y  LI G C T  + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L + M  +GC  ++ +Y  LI   CK   + +A  L  EM  +G+ P+V TYN + 
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +  +++ AL +   M  N    D +TYN+ I GLC  G   EA EL        + 
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389

Query: 496 LNIVSYNCLIDG 507
             ++++  +I+G
Sbjct: 390 PTVITFTNIING 401



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 104/200 (52%)

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L+ +++ +G+ PD VT++ ++   CK G +  A R   L+   G+  +TYT N L+ GY
Sbjct: 169 KLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGY 228

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C T  +  A  L + M   GC  +  SY  LI   C+ + V EAL L   ML  G  P +
Sbjct: 229 CRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNL 288

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TY  L  GL +  ++  A  L DEM R  V    +TYN  IDG CKSG + +AL +   
Sbjct: 289 HTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTL 348

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +  +    +  +YN LI GL
Sbjct: 349 MEGNGCNPDDWTYNSLIHGL 368



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 168/373 (45%), Gaps = 30/373 (8%)

Query: 64  ASLKKFLKERCKSSGQGDINLITP-------NEALCIFDYMLRMHPSPPPVSSFNILFGC 116
           A ++K + E CK+       L+         NEAL I D M  +      + ++ I+   
Sbjct: 620 ALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM-TLRGVKGNIVAYTIIISE 678

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           + K   +D   S+F  + S+G  P   T+++ I+ +CK+GR+     ++G + R+   P+
Sbjct: 679 MIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPD 738

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCR----TGHTI-- 229
            VT+   I G C     M+ A    K  + A CEP+ +TY  L+    +      H +  
Sbjct: 739 VVTYNVFING-CGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDT 797

Query: 230 ------VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                 + L+   ++     + G+   P  VTY++II G CK   +++A  L   M  ++
Sbjct: 798 SGMWNWIKLDTVWQLLERMVKHGL--NPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKD 855

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+P+   YT +I+  C    + +A      M++ G QP + ++  ++  LC  G  DKA 
Sbjct: 856 ISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAK 915

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L   ++    N N   +  L DG      +D   +L  +ME+  C  D  +Y+ + N  
Sbjct: 916 ALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTN-- 973

Query: 404 CKNKDVEEALSLY 416
               ++ EA  +Y
Sbjct: 974 ----NIHEASGMY 982



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 64/148 (43%)

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN  +      D  +H  KL+  +   G + D V+YNT+I  YCK   +  A   +  + 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G++    T N L LG      + +A  L   M       + Y+Y   I GLC++  V 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EAL L   +       N+ +Y  LI GL
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGL 298


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 218/458 (47%), Gaps = 28/458 (6%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  +L + + + C+S   G+ NL     A  I D ++ M       +  N L   L K +
Sbjct: 116 DTIALTQLISKLCRS---GNTNL-----AWNILDNLM-MLNGLKDAAPCNALLTGLGKAR 166

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI------LRSCFTP 175
            +  +  L +++    + P + T  ILIN  CK  R+     V  ++       +    P
Sbjct: 167 EFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAP 226

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + + + +LI GLC   R  EA  L  K R   C P   T+N LING CR+G   VA  LF
Sbjct: 227 DTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLF 286

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            EM N   E      PN +T NT++DG+CK   +  A E F  M+ + +  + VTYT  I
Sbjct: 287 NEMENAQIE------PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFI 340

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
             FC  N+ N+A     EM   G  PD V +  ++  L + G++D AS ++  +   G  
Sbjct: 341 NAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFC 400

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            +   YN LI  +C  +K+D A++    ME  G   D V+YNTLI+++ K  + + A   
Sbjct: 401 LDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKF 460

Query: 416 YSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA----DTYTYNNFI 470
             +M   +G+ PTV TY  L       + ++ A+K+F EM  N+VA+    +T  YN  I
Sbjct: 461 MKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEM--NNVASKVPPNTVIYNILI 518

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D LCK   V  AL L   ++      N  +YN +   L
Sbjct: 519 DSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKAL 556



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 192/423 (45%), Gaps = 38/423 (8%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D +  L  +     +FPD    + LI+  C+ G  +  + +L  ++      +A    +L
Sbjct: 99  DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNAL 158

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           + GL       +   L  K +    +P V T+  LIN LC+      AL +FE+M     
Sbjct: 159 LTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKE 218

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           E  V   P+T+ YNT+IDGLCK G  ++A  L  KM+ +   P   T+  +I G+C + +
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGE 278

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
              A +LF EM +  ++P+V+T + ++D +CK+ ++  A     +M  +G+  N  TY  
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTV 338

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDV------------------------------ 393
            I+ +C  + ++ A +    M  +GC  D                               
Sbjct: 339 FINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAG 398

Query: 394 -----VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                V YN LI+ +CK   ++ A    +EM   G+KP  VTYNTL     +I   + A 
Sbjct: 399 FCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAH 458

Query: 449 KLFDEMRRNH-VAADTYTYNNFIDGLCKSGFVLEALELFRAIRD--SKYELNIVSYNCLI 505
           K   +M     ++   +TY   I   C +  + EA+++F+ + +  SK   N V YN LI
Sbjct: 459 KFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILI 518

Query: 506 DGL 508
           D L
Sbjct: 519 DSL 521



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 171/376 (45%), Gaps = 9/376 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N L   L K    +  L L  ++ S    P   T + LIN +C+ G +     +
Sbjct: 226 PDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKL 285

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +   PN +T  +L+ G+C  +RI  A   F   +    + +  TY   IN  C 
Sbjct: 286 FNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCN 345

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A+   +EM+         C P+ V Y T+I GL + G +D A  +  K+K+   
Sbjct: 346 VNNMNKAMEFLDEMSKDG------CFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGF 399

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D V Y  +I  FC  N  + A+    EM   GV+PD VT++ ++    K G    A +
Sbjct: 400 CLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHK 459

Query: 345 LLELMI-WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME--SNGCMHDVVSYNTLIN 401
            ++ M    G++P  +TY  LI  YCL + ID A K+F  M   ++    + V YN LI+
Sbjct: 460 FMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILID 519

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   V  ALSL  +M  +G+ P   TYN++F  L + + +++A KL D M       
Sbjct: 520 SLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNP 579

Query: 462 DTYTYNNFIDGLCKSG 477
           D  T     + L   G
Sbjct: 580 DYITMEILTEWLSAVG 595



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 11/368 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EALC+   M R     P  ++FN L     ++   +    LF  + +A + P++ T + L
Sbjct: 246 EALCLMGKM-RSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTL 304

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK  R+S        + +     N VT+T  I   C  + + +A     +     C
Sbjct: 305 VDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGC 364

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD   Y TLI GL + G    A ++  ++         VC      YN +I   CK+  
Sbjct: 365 FPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVC------YNVLISEFCKKNK 418

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFS 327
           +D+A+E   +M+   + PD VTY ++I  F    ++  A +   +M ++ G+ P V T+ 
Sbjct: 419 LDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYG 478

Query: 328 VIMDELCKNGKMDKASRLLELM--IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            ++   C N  +D+A ++ + M  +   V PNT  YN LID  C   +++ A  L   M+
Sbjct: 479 ALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMK 538

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G M +  +YN++         +++A  L   M+ +   P  +T   L   L  + ++ 
Sbjct: 539 FRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEIT 598

Query: 446 RALKLFDE 453
           + LK F +
Sbjct: 599 K-LKKFTQ 605



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 170/377 (45%), Gaps = 49/377 (12%)

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
           A +   L++ L     + EA A F+     A   +V   N +IN L ++G    A+N+ +
Sbjct: 6   AQSSVHLLRRLGRIGMVDEALAAFSTLDSHAKNTNV--RNEIINLLLKSGRVDNAMNVLD 63

Query: 237 EMANGNGEFGVVCKPNTVTYNTI--IDGLCKEGFV--DKAKELFLKMKDENINPDVVTYT 292
           EM     EF    K   + +N +  IDGL  EG V  D+   L  K    NI PD +  T
Sbjct: 64  EMLLPESEFRPNDKTAGIVFNNLLKIDGL--EGRVKEDEIAGLVSKFGKHNIFPDTIALT 121

Query: 293 SVIRGFCYAND----WNEAKRLFI-------------------------------EMMDQ 317
            +I   C + +    WN    L +                               +M D 
Sbjct: 122 QLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDM 181

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG------VNPNTYTYNTLIDGYCLT 371
            +QP V+TF ++++ LCK  ++D A  + E M          V P+T  YNTLIDG C  
Sbjct: 182 NIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKV 241

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            + + A  L   M S+ C     ++N LIN YC++ ++E A  L++EM +  I+P V+T 
Sbjct: 242 GRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITL 301

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL  G+ + +++  A++ F  M++  +  +  TY  FI+  C    + +A+E    +  
Sbjct: 302 NTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK 361

Query: 492 SKYELNIVSYNCLIDGL 508
                + V Y  LI GL
Sbjct: 362 DGCFPDAVVYYTLICGL 378



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 6/266 (2%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N+   N+A+   D M +    P  V  + ++ G LA+    D   S+  +L  AG   D 
Sbjct: 345 NVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICG-LAQAGRLDDASSVVSKLKEAGFCLDR 403

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
             +++LI+ FCK  ++      L  +  +   P++VT+ +LI           A     K
Sbjct: 404 VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 463

Query: 203 H-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                   P VFTY  LI+  C   +   A+ +F+EM N          PNTV YN +ID
Sbjct: 464 MTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNN----VASKVPPNTVIYNILID 519

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCK+  V+ A  L   MK   + P+  TY S+ +     N  ++A +L   M++Q   P
Sbjct: 520 SLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNP 579

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLE 347
           D +T  ++ + L   G++ K  +  +
Sbjct: 580 DYITMEILTEWLSAVGEITKLKKFTQ 605


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 207/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N++   + K+K  + V SLF+ ++  G+ P++ T +ILIN  C  G +     +
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  + F P  VT+ +L+   C + R   A  L         E DV TYN  I+ LC 
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +  A  L ++M         +  PN VTYNT+I+G  KEG +  A ++F +M   ++
Sbjct: 316 NHRSAKAYLLLKKMRKE------MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+ VTY ++I G C+  D+ EA RL   M   G++ + VT+  +++ LCK+ K + A R
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 429

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LLE M    +      Y  LIDG C    +D A +L  +M  +G   DV++Y++LIN +C
Sbjct: 430 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +  +++ A  +   M   G+    + Y+TL     +   V  A+K++  M  N   AD +
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T N  +  LC+ G + EA +    +       N ++Y+C+I+G
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 592



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 209/469 (44%), Gaps = 65/469 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L     K   Y   + L   +   G+  D+ T+++ I+  C   R +  +++
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLL 325

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ +   +PN VT+ +LI G   E +I  AA +F +   F   P+  TYN LI G C 
Sbjct: 326 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385

Query: 225 TGHTIVALNLFEEMANGNGEFGVV---------CKPNT--------------------VT 255
            G    AL L + M         V         CK                       + 
Sbjct: 386 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 445

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  +IDGLCK G +D+A +L   M  + +NPDV+TY+S+I GFC   +   AK +   M 
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 505

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+  + + +S ++   C++G + +A ++  +M   G   + +T N L+   C   K+ 
Sbjct: 506 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A K    M   G + + ++Y+ +IN Y    D   A S + +M+  G  P+  TY +L 
Sbjct: 566 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 625

Query: 436 LGLFE-------------IHQV----------------------ERALKLFDEMRRNHVA 460
            GL +             +H +                        A+ LFD+M +N+V 
Sbjct: 626 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 685

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDGL 508
            D+YTY++ + GLC+ G  + A+ LF  A+       N V Y CL+DGL
Sbjct: 686 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 734



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 195/393 (49%), Gaps = 29/393 (7%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L K + YD+  S+ + L                   C+MG  S    + G ++ +    N
Sbjct: 122 LVKARMYDSAKSILRHL-------------------CQMGIGSKS--IFGALMDTYPLCN 160

Query: 177 AV--TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           ++   F  LI+    E  I  A   F    +   +P V+T N ++  + +   T +  +L
Sbjct: 161 SIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSL 220

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F EM++       +C PN  T+N +I+GLC EG + KA  L  +M++    P +VTY ++
Sbjct: 221 FREMSDKG-----IC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 274

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           +  +C    +  A  L   M+ +G++ DV T++V +D LC N +  KA  LL+ M    +
Sbjct: 275 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 334

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           +PN  TYNTLI+G+    KI  A ++F  M       + V+YN LI  +C   D EEAL 
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 394

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L   M + G++   VTY TL  GL +  + E A +L + MR N +      Y   IDGLC
Sbjct: 395 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 454

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K+G + EA++L   +       ++++Y+ LI+G
Sbjct: 455 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLING 487



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 190/416 (45%), Gaps = 9/416 (2%)

Query: 96   YMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
            ++ R+H  P  V S  +N L     K+ +    ++LF ++    + PD YT+S L+   C
Sbjct: 640  FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 699

Query: 154  KMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G+      + G  + R    PN V +T L+ GL        A   F +       PD 
Sbjct: 700  RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 759

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
              +N +I+   R G  + A + F  M      +  VC PN  TYN ++ G  K+  + + 
Sbjct: 760  VAFNAIIDSCSRRGQMMKANDFFSTM-----RWWGVC-PNLATYNILLHGFSKKQALLRY 813

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
              L+  M  E I PD +T+ S+I G   +   +   +L  +M+ +G   D  TF++++++
Sbjct: 814  LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 873

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              ++GKM KA  L+  M   GV P+  TYN + +G         +  +   M  NG +  
Sbjct: 874  YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 933

Query: 393  VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
               Y TLIN  C+  D++ A  L  EM + G     V  + +  GL    + E A+ + D
Sbjct: 934  HAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLD 993

Query: 453  EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             M R  +     T+   +   C+   + EAL+L   +     +L++V+YN LI G+
Sbjct: 994  HMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 1049



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 215/482 (44%), Gaps = 24/482 (4%)

Query: 38  ISENEPSYPTTTSKLKESLRLTVKDRA--SLKKF-LKERCKSSGQ---GDINLITPNEAL 91
           IS NE +Y T  +   +  ++ V  +    + KF L   C +      G  ++    EAL
Sbjct: 334 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 393

Query: 92  CIFDYM----LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            + D+M    LR++       ++  L   L K++ ++    L +R+    +      +++
Sbjct: 394 RLLDHMEAAGLRLNEV-----TYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 448

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G +     ++G + +    P+ +T++SLI G C    I  A  +  +     
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              +   Y+TLI   C+ G+   A+ ++  M  NG+G     C       N ++  LC++
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC-------NVLVSSLCRD 561

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G + +A++    M    + P+ +TY  +I G+    D   A   F +M+  G  P   T+
Sbjct: 562 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTY 621

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++  LCK G + +A + L  + +     ++  YNTL+   C +  +  A  LF  M  
Sbjct: 622 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ 681

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVE 445
           N  + D  +Y++L+   C+      A+ L+   + +G + P  V Y  L  GL +    +
Sbjct: 682 NNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPK 741

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A   F+EM +     DT  +N  ID   + G +++A + F  +R      N+ +YN L+
Sbjct: 742 AAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 801

Query: 506 DG 507
            G
Sbjct: 802 HG 803



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 141/299 (47%), Gaps = 8/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P VF  + LI    + G    A+  FE +    G  G   KP+  T N I+  + K+   
Sbjct: 163 PSVF--DLLIRVYLKEGMIDYAVETFELV----GLVGF--KPSVYTCNMILASMVKDKRT 214

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +    LF +M D+ I P+V T+  +I G C   +  +A  L  +M + G  P +VT++ +
Sbjct: 215 ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 274

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  CK G+   A  L++ MI +G+  +  TYN  ID  C   +   A  L   M     
Sbjct: 275 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 334

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V+YNTLIN + K   +  A  +++EM    + P  VTYN L  G   +   E AL+
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 394

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L D M    +  +  TY   ++GLCK      A  L   +R +   +  ++Y  LIDGL
Sbjct: 395 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 453



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 161/370 (43%), Gaps = 7/370 (1%)

Query: 87   PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
            P  A   F+ M++    P  V+ FN +    ++          F  +   G+ P++ T++
Sbjct: 740  PKAAFYFFEEMMKKGTCPDTVA-FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 798

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            IL++ F K   +     +   ++R    P+ +TF SLI GL           L  K  + 
Sbjct: 799  ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 858

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
                D FT+N LIN    +G    A +L   M N  G F     P+  TYN I +GL K+
Sbjct: 859  GTLADQFTFNILINKYSESGKMRKAFDLVNFM-NTLGVF-----PDRDTYNHIFNGLNKK 912

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
                ++  +  +M +  + P    Y ++I G C   D   A +L  EM   G     V  
Sbjct: 913  SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 972

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            S ++  L   GK + A  +L+ M+   + P   T+ TL+  +C   KI  A KL   ME 
Sbjct: 973  SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1032

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   DVV+YN LI   C N D   A  LY EM  + + P + TY  L   +   + + +
Sbjct: 1033 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1092

Query: 447  ALKLFDEMRR 456
              KL  +++ 
Sbjct: 1093 GEKLLTDLQE 1102



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 6/320 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P ++++NIL    +K +     LSL+  +   G+FPD  T   LI    K G    G  +
Sbjct: 792  PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 851

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            LG+++      +  TF  LI       ++ +A  L          PD  TYN + NGL +
Sbjct: 852  LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 911

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  +  +  EM     E GV+  P    Y T+I+G+C+ G +  A +L  +M+    
Sbjct: 912  KSAFRESTVVLHEML----ENGVI--PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                V  ++++RG  +     +A  +   M+   + P + TF+ +M   C++ K+ +A +
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  +M   G+  +   YN LI G C       A +L+  M       ++ +Y  L++   
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1085

Query: 405  KNKDVEEALSLYSEMLSKGI 424
               ++ +   L +++  +G+
Sbjct: 1086 AANNLIQGEKLLTDLQERGL 1105



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%)

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  LC+ G   K+     +  +   N     ++ LI  Y     ID+A + F  +   G
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVG 193

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               V + N ++    K+K  E   SL+ EM  KGI P V T+N L  GL     +++A 
Sbjct: 194 FKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAG 253

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L  +M  N       TYN  ++  CK G    A+EL   +     E ++ +YN  ID L
Sbjct: 254 NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL 313


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 205/432 (47%), Gaps = 41/432 (9%)

Query: 112  ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
            +L   L   +  +  L L +    AG  P +  +++LI+ +C+ G +  G ++LG +  +
Sbjct: 983  VLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETN 1042

Query: 172  CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
             F P  VT+ SLI  L  +  + +  +LF + R     P+V  YN++I+ LC       A
Sbjct: 1043 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQA 1102

Query: 232  LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            + + ++M      F   C P+ +T+NT+I GLC EG V KA+    +     +NP+ ++Y
Sbjct: 1103 MVILKQM------FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1156

Query: 292  TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS------------------------ 327
            T +I GFC   +   A  L +EMM +G  PDVVTF                         
Sbjct: 1157 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1216

Query: 328  -----------VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
                       V++  LCK   +  A  +LE M+ + V P+ + Y TLIDG+  ++ +  
Sbjct: 1217 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 1276

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            ARK+F  ME  G   D+VS N +I  YC+   + EA+   S M   G  P   TY T+  
Sbjct: 1277 ARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 1336

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            G  +   +  AL+   +M +     +  TY++ I+G CK+G    A  LF  ++      
Sbjct: 1337 GYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSP 1396

Query: 497  NIVSYNCLIDGL 508
            N+V+Y  LI  L
Sbjct: 1397 NVVTYTILIGSL 1408



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 184/369 (49%), Gaps = 6/369 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V  +N +   L   +     + + K++ ++G  PDI T + LI   C  G V      
Sbjct: 1081 PNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 1140

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L   +R    PN +++T LI G C    +M A+ L  +       PDV T+  LI+GL  
Sbjct: 1141 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1200

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G    AL + E+M            P+   YN +I GLCK+  +  AK +  +M ++N+
Sbjct: 1201 AGKVSEALIVREKMTERQ------VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1254

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             PD   Y ++I GF  + +  +A+++F  M  +GV PD+V+ + ++   C+ G M +A  
Sbjct: 1255 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAIL 1314

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             +  M   G  P+ +TY T+I GY     ++ A +    M    C  +VV+Y++LIN YC
Sbjct: 1315 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            K  D + A  L++ M ++ + P VVTY  L   LF+  +V RA   F+ M  NH + +  
Sbjct: 1375 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1434

Query: 465  TYNNFIDGL 473
            T +  ++GL
Sbjct: 1435 TLHYLVNGL 1443



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 160/362 (44%), Gaps = 27/362 (7%)

Query: 93   IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
            + + M R H   P V +F  L   L         L + +++    +FPD+  +++LI+  
Sbjct: 1176 LVEMMGRGHT--PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233

Query: 153  CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            CK   +     +L  +L     P+   + +LI G      + +A  +F         PD+
Sbjct: 1234 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDI 1293

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             + N +I G C+ G    A+     M        V C P+  TY T+I G  K+G ++ A
Sbjct: 1294 VSCNAMIKGYCQFGMMSEAILCMSNMRK------VGCIPDEFTYTTVISGYAKQGNLNGA 1347

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
                  M      P+VVTY+S+I G+C   D + A+ LF  M  + + P+VVT+++++  
Sbjct: 1348 LRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGS 1407

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY------------CLTDKIDHARKL 380
            L K  K+ +A    E M+    +PN  T + L++G             C T ++     L
Sbjct: 1408 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL 1467

Query: 381  FVSMESNGCMHDV-----VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
             V  +    + D+      +YN +I   C++  + EAL   + M  KG  P  +T+ +L 
Sbjct: 1468 LVVFKK--LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1525

Query: 436  LG 437
             G
Sbjct: 1526 YG 1527



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 1/258 (0%)

Query: 251  PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN-PDVVTYTSVIRGFCYANDWNEAKR 309
            P       ++      G + KA E+  +++++  + P+V     +++       W++A++
Sbjct: 905  PTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 964

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            L+ EM+ +    D  +  V++  LC   ++++  +L+E     G  P+   YN LIDGYC
Sbjct: 965  LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1024

Query: 370  LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                +     L   ME+NG +  +V+Y +LINW  K  D+E+  SL+ EM  +G  P V 
Sbjct: 1025 RRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1084

Query: 430  TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
             YN++   L       +A+ +  +M  +    D  T+N  I GLC  G V +A    R  
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144

Query: 490  RDSKYELNIVSYNCLIDG 507
               +   N +SY  LI G
Sbjct: 1145 IRRELNPNQLSYTPLIHG 1162



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 129/299 (43%), Gaps = 6/299 (2%)

Query: 210  PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            P+V   N L+  L        A  L++EM       G     +  +   ++ GLC E  V
Sbjct: 941  PEVTHCNRLLKLLVEQRRWDDARKLYDEM------LGKDSGADNYSTCVLVRGLCLERRV 994

Query: 270  DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            ++  +L          P VV Y  +I G+C   D      L  EM   G  P +VT+  +
Sbjct: 995  EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSL 1054

Query: 330  MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
            ++ L K G ++K   L   M  RG +PN   YN++ID  C       A  +   M ++GC
Sbjct: 1055 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1114

Query: 390  MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              D++++NTLI   C    V +A     E + + + P  ++Y  L  G     ++  A  
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1174

Query: 450  LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L  EM       D  T+   I GL  +G V EAL +   + + +   ++  YN LI GL
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 1/259 (0%)

Query: 251  PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
            P  + ++T++  L +    D   +    M      P      +++  +  A    +A  +
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 311  FIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
               + +Q G  P+V   + ++  L +  + D A +L + M+ +    + Y+   L+ G C
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC 989

Query: 370  LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            L  +++   KL  +    GC+  VV YN LI+ YC+  D+   L L  EM + G  PT+V
Sbjct: 990  LERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLV 1049

Query: 430  TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            TY +L   L +   +E+   LF EMR+   + +   YN+ ID LC      +A+ + + +
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 490  RDSKYELNIVSYNCLIDGL 508
              S  + +I+++N LI GL
Sbjct: 1110 FASGCDPDIITFNTLITGL 1128



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 130/319 (40%), Gaps = 56/319 (17%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V+ +N+L   L K +      ++ + +    + PD + ++ LI+ F +   +     +
Sbjct: 1221 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1280

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +      P+ V+  ++IKG C    + EA    +  R   C PD FTY T+I+G  +
Sbjct: 1281 FEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1340

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G+   AL    +M          CKPN VTY+++I+G CK G  D A+ LF  M+ E +
Sbjct: 1341 QGNLNGALRWLCDMIKRK------CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 1394

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT------------------- 325
            +P+VVTYT +I      +    A   F  M+     P+ VT                   
Sbjct: 1395 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 1454

Query: 326  -------------------------------FSVIMDELCKNGKMDKASRLLELMIWRGV 354
                                           ++ I+  LC++  + +A      M  +G 
Sbjct: 1455 CCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGY 1514

Query: 355  NPNTYTYNTLIDGYCLTDK 373
             PN  T+ +L+ G+C   K
Sbjct: 1515 VPNPITFLSLLYGFCSVGK 1533


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 205/395 (51%), Gaps = 42/395 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+  F+ ML M  +PP +  FN + G   K K+Y   +SL K++   G+ P++ T +I
Sbjct: 36  DDAVSQFNRMLLMRHTPP-IIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNI 94

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LINCFC +G ++  F VLG+IL+  + PN +T T+LIKGLC +  + ++     K     
Sbjct: 95  LINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQG 154

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +  +  TL+NGLC+ G    A+ L   + + +         N V YNTIIDGLCK+ 
Sbjct: 155 FQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRS------TITNVVMYNTIIDGLCKDK 208

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V++A +L+ +M      P+V+TY ++I GFC A    EA  L  EM+ + + PDV T++
Sbjct: 209 LVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYN 268

Query: 328 VIMDELCKNGK----------------------------------MDKASRLLELMIWRG 353
           ++MD LCK GK                                  +DKA  L + M  R 
Sbjct: 269 ILMDALCKEGKSYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERR 328

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           + PN YT++ L  G     ++ +A++ F  +   G   DV +Y  +I+  CK   ++EAL
Sbjct: 329 IQPNVYTHSXLT-GCVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEAL 387

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           ++  +M   G  P  VT+  +   LFE  + ++AL
Sbjct: 388 AMKXKMEDNGCIPNAVTFEIIICSLFEKDENDKAL 422



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 160/310 (51%), Gaps = 7/310 (2%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           +A + F +  +    P +  +N ++    +  +   A++L ++M     E      PN V
Sbjct: 37  DAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIE------PNLV 90

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T N +I+  C  G +  +  +  K+      P+ +T T++I+G C  ++  ++     ++
Sbjct: 91  TLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKL 150

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           + QG Q + V+   +++ LCK G+M  A +LL ++  R    N   YNT+IDG C    +
Sbjct: 151 VAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLV 210

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  L+  M+  G   +V++Y+TLI  +C    + EA  L  EM+ K I P V TYN L
Sbjct: 211 NEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNIL 270

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
              L +  +   AL L DE+ R    AD  TY + +DG CK+ ++ +A+ LF+ +++ + 
Sbjct: 271 MDALCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRI 329

Query: 495 ELNIVSYNCL 504
           + N+ +++ L
Sbjct: 330 QPNVYTHSXL 339



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 132/257 (51%), Gaps = 1/257 (0%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P  + +N I+    K  +   A  L  +M+ + I P++VT   +I  FC+      +  +
Sbjct: 52  PPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFSV 111

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +++  G QP+ +T + ++  LC   ++ K+    + ++ +G   N  +  TL++G C 
Sbjct: 112 LGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCK 171

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             ++  A KL   +E    + +VV YNT+I+  CK+K V EA  LYSEM  +G  P V+T
Sbjct: 172 IGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVRGNFPNVIT 231

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y+TL  G     Q+  A  L  EM   ++  D YTYN  +D LCK G    AL+L   I 
Sbjct: 232 YHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGKSY-ALDLIDEIH 290

Query: 491 DSKYELNIVSYNCLIDG 507
             +   ++V+Y  L+DG
Sbjct: 291 RRRQPADVVTYTSLLDG 307


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 183/340 (53%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L     PN ++F +++   C    ++ A A F     F    D FTY +LI G C+   
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  +FE M          C  N V+Y  +I G C+ G +D+A ELF +MK++   PD
Sbjct: 241 LGDAYKVFEIMPQEG------CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPD 294

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V TYT ++  FC      EA + F EM++ G++P+V T++V++D  CK GKMD+   +L 
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M+ +G+  +   +N LIDGYC    ++ A  +  SM+ N    +  +YN LI  +C+ K
Sbjct: 355 TMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKK 414

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            ++ A++L ++M    + P +VTYNTL  GL +   V+ A +L   M ++    D  T+ 
Sbjct: 415 SMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFC 474

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            FID LCK G V +A ++F ++++   E N   Y  LIDG
Sbjct: 475 AFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 206/419 (49%), Gaps = 7/419 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +F+ M +       VS  N++ G     K  D  L LF ++   G FPD+ T+++L
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK-IDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  FC++G+ +        ++ +   PN  T+T LI   C   ++ E   + +       
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
              V  +N LI+G C+ G    A+ + + M     +   VC PN+ TYN +I G C++  
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSM-----KLNKVC-PNSRTYNELICGFCRKKS 415

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +D+A  L  KM +  ++P++VTY ++I G C A   + A RL   M+  G  PD  TF  
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D LCK GK+++A ++ E +  +    N + Y  LIDGYC  +K   A  LF  M   G
Sbjct: 476 FIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG 535

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  + +++N L++   K   VE+A+SL   M     KPTV TY  L   +      +RA 
Sbjct: 536 CFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRAN 595

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              D+M  +    +  TY  FI   C+ G +LEA E+   I++    L+   Y+ L++ 
Sbjct: 596 MFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 214/424 (50%), Gaps = 7/424 (1%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           ++ +EA  + + +L  H     V+S+N LF  L++    D +  LFK + + G+ P++ +
Sbjct: 134 VSSHEARFVLN-LLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLIS 192

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            + ++N  CK+G V         +++  F  ++ T+TSLI G C    + +A  +F    
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C  +  +Y  LI+G C  G    AL LF +M          C P+  TY  ++   C
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG------CFPDVPTYTVLVAAFC 306

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           + G   +A + F +M +  I P+V TYT +I  FC     +E   +   M+++G+   VV
Sbjct: 307 EVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVV 366

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            F+ ++D  CK G M+ A  +L+ M    V PN+ TYN LI G+C    +D A  L   M
Sbjct: 367 PFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKM 426

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
             N    ++V+YNTLI+  CK + V+ A  L+  M+  G  P   T+      L ++ +V
Sbjct: 427 YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKV 486

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A ++F+ ++  H  A+ + Y   IDG CK+    +A  LF+ +       N +++N L
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVL 546

Query: 505 IDGL 508
           +DGL
Sbjct: 547 LDGL 550



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 209/448 (46%), Gaps = 37/448 (8%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+C+ D M +++   P   ++N L     + K  D  ++L  ++    L P++ T++ L
Sbjct: 383 DAICVLDSM-KLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTL 441

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK   V   + +   +++  F P+  TF + I  LC   ++ +A  +F   +    
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           E + F Y  LI+G C+      A  LF+ M          C PN++T+N ++DGL KEG 
Sbjct: 502 EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG------CFPNSITFNVLLDGLRKEGK 555

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V+ A  L   M   +  P V TYT +I      +D++ A     +M+  G QP+VVT++ 
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +   C+ G++ +A  ++  +   G+  +++ Y+ L++ Y    ++D A  + + M   G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675

Query: 389 CMHDVVSYNTLIN----------------------------WYCKNKDVEEALSLYSEML 420
           C     +Y+ L+                             W  K  D E    L+ +M+
Sbjct: 676 CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIW--KIADFEIITMLFEKMV 733

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            +G  P V TY+ L  GL ++  +  A +LF+ M+ + ++     +N+ +   CK G   
Sbjct: 734 EQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHE 793

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EAL L  ++ +  +  ++ SY  L+ GL
Sbjct: 794 EALRLLDSMMEYNHLAHLESYKLLVCGL 821



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 212/501 (42%), Gaps = 103/501 (20%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +F + ++     P V ++ +L     +       L  F+ +   G+ P++YT+++
Sbjct: 277 DEALELF-FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK+G++  G  +L  +L      + V F +LI G C    + +A  +    ++  
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC--- 264
             P+  TYN LI G CR      A+ L  +M            PN VTYNT+I GLC   
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK------LSPNLVTYNTLIHGLCKAR 449

Query: 265 -------------KEGF-------------------VDKAKELFLKMKDENINPDVVTYT 292
                        K+GF                   V++A ++F  +K+++   +   YT
Sbjct: 450 VVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYT 509

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM------------- 339
           ++I G+C A  +++A  LF  M+ +G  P+ +TF+V++D L K GK+             
Sbjct: 510 ALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569

Query: 340 ----------------------DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
                                 D+A+  L+ MI  G  PN  TY   I  YC   ++  A
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF-- 435
            ++ V ++  G + D   Y+ L+N Y     ++ A  +   M   G +P+  TY+ L   
Sbjct: 630 EEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKH 689

Query: 436 ----------LGL--------------FEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
                     +GL              ++I   E    LF++M       +  TY+  I 
Sbjct: 690 LIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIK 749

Query: 472 GLCKSGFVLEALELFRAIRDS 492
           GLCK   +  A  LF  +++S
Sbjct: 750 GLCKVEHLSLAFRLFNHMKES 770



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 196/430 (45%), Gaps = 32/430 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L   L K +  D+   L   +   G  PD  T    I+C CKMG+V     V
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N   +T+LI G C   +  +A  LF +     C P+  T+N L++GL +
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++L + M    G+F    KP   TY  +I+ + +E   D+A     +M     
Sbjct: 553 EGKVEDAMSLVDVM----GKFDA--KPTVHTYTILIEEILRESDFDRANMFLDQMISSGC 606

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VVTYT+ I+ +C      EA+ + +++ ++G+  D   + V+++     G++D A  
Sbjct: 607 QPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFG 666

Query: 345 LLELMIWRGVNPNTYTYNTLI----------DGYCL-----TDKIDHAR----------- 378
           +L  M   G  P+  TY+ L+          +G  L        +D+A            
Sbjct: 667 VLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIIT 726

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF  M   GC+ +V +Y+ LI   CK + +  A  L++ M   GI P+   +N+L    
Sbjct: 727 MLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSC 786

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++   E AL+L D M   +  A   +Y   + GL + G   +A E+FR++    Y  + 
Sbjct: 787 CKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDE 846

Query: 499 VSYNCLIDGL 508
           V +  L+DGL
Sbjct: 847 VVWKVLLDGL 856



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 151/356 (42%), Gaps = 32/356 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN+L   L K    +  +SL   +      P ++T++ILI    +        + 
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ S   PN VT+T+ IK  C + R++EA  +  K +      D F Y+ L+N    
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC-----KEGF----------V 269
            G    A  +   M      F   C+P+  TY+ ++  L      KEG           V
Sbjct: 658 IGQLDSAFGVLIRM------FDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISV 711

Query: 270 DKAK-----------ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           D A             LF KM ++   P+V TY+ +I+G C     + A RLF  M + G
Sbjct: 712 DNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESG 771

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + P     + ++   CK G  ++A RLL+ M+      +  +Y  L+ G       + A 
Sbjct: 772 ISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAE 831

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           ++F S+ S G  +D V +  L++   +   V+E   L   M   G +    T+  L
Sbjct: 832 EIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 15/235 (6%)

Query: 108 SSFNILF-----GCLAKNKHYDTVLS--LFKRLNSAGLFPDIYTHSILINC--FCKMGRV 158
           S+F +L      GC    + Y  +L   +F++ N  G+  D+ + +I ++     K+   
Sbjct: 663 SAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADF 722

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
               ++  +++     PN  T++ LIKGLC    +  A  LF   +     P    +N+L
Sbjct: 723 EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSL 782

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++  C+ G    AL L + M   N         +  +Y  ++ GL ++G  +KA+E+F  
Sbjct: 783 LSSCCKLGMHEEALRLLDSMMEYNH------LAHLESYKLLVCGLFEQGNQEKAEEIFRS 836

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           +     N D V +  ++ G       +E  +L   M   G +    T +++  EL
Sbjct: 837 LLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 197/396 (49%), Gaps = 27/396 (6%)

Query: 83  NLITP-NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
           NL  P N   C+ + M++M  S P V+                  L  +  +  +G  P+
Sbjct: 192 NLKIPFNGCKCLLERMIKM--SSPMVA------------------LEFYLEILDSGYPPN 231

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +YT ++L+N  CK G+V    ++   I ++   P AV+F +LI G C    + E   L  
Sbjct: 232 VYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKM 291

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
               F   PDVFTY+ LI+GLC+      A +LF+EM +     G+V  PN VT+ T+I+
Sbjct: 292 VMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDR----GLV--PNDVTFTTLIN 345

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           G CK G VD A E++ +M  + +  D+V Y ++I G C    + EA++   EM  +G+ P
Sbjct: 346 GQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIP 405

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D  T++ ++D  CK G ++ A  + + M+  G+  +   +  +I G C   KI  A +  
Sbjct: 406 DKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTL 465

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M   G   D  +Y  +++ +CK  DV+    L  EM S G  P V+TYN L  GL + 
Sbjct: 466 REMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQ 525

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
            QV+ A  L + M    V  D  TYN  + G CK G
Sbjct: 526 GQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHG 561



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 179/341 (52%), Gaps = 6/341 (1%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            IL S + PN  TF  L+  LC E ++ +A  +F + R    +P   ++NTLING C++G
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +      L   M     EF V   P+  TY+ +IDGLCKE  ++ A  LF +M D  + P
Sbjct: 282 NLEEGFRLKMVME----EFRVF--PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + VT+T++I G C     + A  ++ +M  +G++ D+V ++ ++D LCK G   +A + +
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG+ P+ +TY TL+DG C    ++ A ++   M   G   D V++  +I+  C++
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + +A     EML  G+KP   TY  +  G  +   V+   KL  EM+ +       TY
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  ++GLCK G V  A  L  A+ +     + ++YN L+ G
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V+T+N L+N LC+ G    A  +F+E+           +P  V++NT+I+G CK G +
Sbjct: 230 PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG------LQPTAVSFNTLINGYCKSGNL 283

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++   L + M++  + PDV TY+++I G C      +A  LF EM D+G+ P+ VTF+ +
Sbjct: 284 EEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTL 343

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  CKNG++D A  + + M  +G+  +   YNTLIDG C       ARK    M   G 
Sbjct: 344 INGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGL 403

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + D  +Y TL++  CK  D+E AL +  EM+ +GI+   V +  +  GL    ++  A +
Sbjct: 404 IPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAER 463

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EM R  +  D  TY   +DG CK G V    +L + ++   +   +++YN L++GL
Sbjct: 464 TLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 189/368 (51%), Gaps = 18/368 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  IFD + +    P  VS FN L     K+ + +    L   +    +FPD++T+S L
Sbjct: 250 DAQLIFDEIRKTGLQPTAVS-FNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSAL 308

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK  ++     +   +      PN VTFT+LI G C   R+  A  ++ +      
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL 368

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           + D+  YNTLI+GLC+ G+   A     EM     + G++  P+  TY T++DG CKEG 
Sbjct: 369 KADLVLYNTLIDGLCKGGYFREARKFVGEMT----KRGLI--PDKFTYTTLLDGSCKEGD 422

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++ A E+  +M  E I  D V +T++I G C      +A+R   EM+  G++PD  T+++
Sbjct: 423 LELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTM 482

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +MD  CK G +    +LL+ M   G  P   TYN L++G C   ++ +A  L  +M + G
Sbjct: 483 VMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLG 542

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D ++YN L+  +CK+  + +  ++ +EM   G+     +Y +L      +H++ +A 
Sbjct: 543 VVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSL------LHELSKAS 593

Query: 449 KLFDEMRR 456
           K  D  +R
Sbjct: 594 K--DRQKR 599



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 131/237 (55%)

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A E +L++ D    P+V T+  ++   C      +A+ +F E+   G+QP  V+F+ +++
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK+G +++  RL  +M    V P+ +TY+ LIDG C   +++ A  LF  M   G + 
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           + V++ TLIN  CKN  V+ AL +Y +M +KG+K  +V YNTL  GL +      A K  
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EM +  +  D +TY   +DG CK G +  ALE+ + +     +L+ V++  +I GL
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 220/436 (50%), Gaps = 12/436 (2%)

Query: 77  SGQGDINLITP---NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           S  G I+L+ P   NEAL ++  M+      P + +++ L   L +      +++L + +
Sbjct: 203 SYNGLIHLLLPGFCNEALKVYKRMIS-EGMKPSMKTYSALMVALGRRGDTRKIMNLLEEM 261

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
            S GL P+IYT++I I    +  R+   + +   +      P+ +T+T LI  LCA  ++
Sbjct: 262 KSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKL 321

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 252
            +A  L+ K R  +  PD  TY TL++   + G        + EM  +G         P+
Sbjct: 322 DKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA-------PD 374

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTY  +I+ LCK G VD+A ++   M  + I P++ TY ++I G   A   +EA  L  
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M   GV+P   ++ + +D   K+G   KA    E M  RG+ P+    N  +     T 
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +I  A  +F  +   G   D V+YN L+  Y K   +++A  L SEM+SKG +P V+  N
Sbjct: 495 RISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIIN 554

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +L   L++  +V+ A K+F  ++   +A    TYN  + GL K G +L+ALELF ++ +S
Sbjct: 555 SLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTES 614

Query: 493 KYELNIVSYNCLIDGL 508
               N +++N L+D L
Sbjct: 615 GCPPNTITFNSLLDCL 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 196/379 (51%), Gaps = 7/379 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            +++   G   + Y+++ LI+     G  +    V  R++     P+  T+++L+  L  
Sbjct: 189 LRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGR 247

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                +   L  + +     P+++TY   I  L R      A  +F+EM +        C
Sbjct: 248 RGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG------C 301

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ +TY  +ID LC  G +DKAKEL++KM+  + +PD VTY +++  F    D    KR
Sbjct: 302 GPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKR 361

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            + EM   G  PDVVT++++++ LCK+G +D+A  +L++M  +G+ PN +TYNT+I G  
Sbjct: 362 FWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLL 421

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++D A +L  +MES G      SY   I++Y K+ D  +A+  +  M  +GI P++ 
Sbjct: 422 KARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIA 481

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
             N     L E  ++  A  +F+++ +  ++ D+ TYN  +    K+G + +A +L   +
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM 541

Query: 490 RDSKYELNIVSYNCLIDGL 508
                E +++  N LI+ L
Sbjct: 542 ISKGCEPDVMIINSLINTL 560



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 215/475 (45%), Gaps = 77/475 (16%)

Query: 104  PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR------ 157
            PP   +FN L  CL+KN   D  L +F R+      PD+ T++ +I    + GR      
Sbjct: 617  PPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFW 676

Query: 158  -----------------------VSHGFV------VLGRILRSCFTPN------------ 176
                                   V HG V      V+  + ++C   N            
Sbjct: 677  FFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECIL 736

Query: 177  -------AVTFTS----------------LIKGLCAESRIMEAAALFTKH-RVFACEPDV 212
                   A++F                  LIK LC   + ++A  +F K  +     P +
Sbjct: 737  TEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTL 796

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             +YN L++GL  +  T  AL LFE+M +          PN  TYN ++D   K   ++K 
Sbjct: 797  ESYNCLMDGLLGSNFTEKALELFEDMKSAG------THPNNFTYNLLLDAHGKSKRINKL 850

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +L+ +M+     P+ +T+  +I     +N+ N+A  L+ E+M     P   T+  ++D 
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            L K G+ ++A ++ E M+  G  PN+  YN LI+G+  + +ID A +LF  M   G   D
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 393  VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + SY  L+   C    ++EA+  + E+   G+ P  V+YN +  GL +  +++ AL LF 
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 453  EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            EM+   ++ D YTYN  I  L  +G V  A++++  ++    E ++ +YN LI G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG 1085



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 182/346 (52%), Gaps = 6/346 (1%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            +A  +FD   +     P + S+N L   L  +   +  L LF+ + SAG  P+ +T+++L
Sbjct: 778  DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            ++   K  R++  + +   +      PNA+T   +I  L   + + +A  L+ +      
Sbjct: 838  LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897

Query: 209  EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             P   TY  LI+GL + G +  A+ +FEEM     ++G  C PN+V YN +I+G  K G 
Sbjct: 898  SPTPCTYGPLIDGLLKAGRSEQAMKIFEEML----DYG--CGPNSVIYNILINGFGKSGE 951

Query: 269  VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +D A ELF KM  E I PD+ +YT ++   C     +EA + F E+   G+ PD V+++ 
Sbjct: 952  IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            I++ L K+ ++D+A  L   M  RG++P+ YTYN LI    +  K+D A K++  ++  G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071

Query: 389  CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
                V +YN LI  +  + + ++A S++ +M+  G  P   T+  L
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 199/441 (45%), Gaps = 44/441 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V   N L   L K    D    +F RL +  L P + T++IL+    K G++     +
Sbjct: 548 PDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALEL 607

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G +  S   PN +TF SL+  L     +  A  +F +  +  C PDV TYNT+I GL R
Sbjct: 608 FGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIR 667

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-- 282
            G    A   F +M            P+ VT  T+I G+ + G V+ A ++ ++   +  
Sbjct: 668 EGRIDYAFWFFHQMKK-------FLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQAC 720

Query: 283 ----------------------------------NINPDVVTYTSVIRGFCYANDWNEAK 308
                                             ++  D      +I+  C      +A+
Sbjct: 721 LQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQ 780

Query: 309 RLFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            +F +     G+ P + +++ +MD L  +   +KA  L E M   G +PN +TYN L+D 
Sbjct: 781 NVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDA 840

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           +  + +I+    L+  M S GC  + +++N +I+   K+ ++ +AL LY E++S    PT
Sbjct: 841 HGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPT 900

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             TY  L  GL +  + E+A+K+F+EM       ++  YN  I+G  KSG +  A ELF+
Sbjct: 901 PCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFK 960

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +       ++ SY  L++ L
Sbjct: 961 KMVKEGIRPDLKSYTILVECL 981



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 191/388 (49%), Gaps = 7/388 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R     P   ++  L     K    +TV   +  +   G  PD+ T++ILI   CK G 
Sbjct: 331 MRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGD 390

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   F +L  +      PN  T+ ++I GL    R+ EA  L         +P  F+Y  
Sbjct: 391 VDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVL 450

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            I+   ++G    A++ FE M     + G++  P+    N  +  L + G + +A+++F 
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMK----KRGIM--PSIAACNASLYTLAETGRISEAEDIFN 504

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            +    ++PD VTY  +++ +  A   ++A +L  EM+ +G +PDV+  + +++ L K G
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAG 564

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++D A ++   +    + P   TYN L+ G     KI  A +LF SM  +GC  + +++N
Sbjct: 565 RVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFN 624

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           +L++   KN  V+ AL ++  M      P V+TYNT+  GL    +++ A   F +M++ 
Sbjct: 625 SLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK- 683

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALEL 485
            ++ D  T    I G+ + G V +A+++
Sbjct: 684 FLSPDYVTLCTLIPGVVRHGRVEDAIKV 711



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 161/315 (51%), Gaps = 7/315 (2%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            +AL +F+ M +   + P   ++N+L     K+K  + +  L+  + S G  P+  TH+I+
Sbjct: 814  KALELFEDM-KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 149  INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
            I+   K   ++    +   ++   F+P   T+  LI GL    R  +A  +F +   + C
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 209  EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             P+   YN LING  ++G    A  LF++M           +P+  +Y  +++ LC  G 
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEG------IRPDLKSYTILVECLCITGR 986

Query: 269  VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            +D+A + F ++K   ++PD V+Y  +I G   +   +EA  LF EM ++G+ PD+ T++ 
Sbjct: 987  IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            ++  L   GK+D A ++ E +   G+ P+ +TYN LI G+ L+   D A  +F  M   G
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106

Query: 389  CMHDVVSYNTLINWY 403
            C  +  ++  L N Y
Sbjct: 1107 CSPNTETFAQLPNKY 1121



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 7/250 (2%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            N+AL ++  ++    SP P + +  L   L K    +  + +F+ +   G  P+   ++I
Sbjct: 883  NKALDLYYELMSGDFSPTPCT-YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LIN F K G +     +  ++++    P+  ++T L++ LC   RI EA   F + ++  
Sbjct: 942  LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             +PD  +YN +INGL ++     AL+LF EM N          P+  TYN +I  L   G
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG------ISPDLYTYNALILHLGIAG 1055

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             VD A +++ +++   + P V TY ++IRG   + + ++A  +F +MM  G  P+  TF+
Sbjct: 1056 KVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFA 1115

Query: 328  VIMDELCKNG 337
             + ++  + G
Sbjct: 1116 QLPNKYPRAG 1125



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 9/201 (4%)

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID--- 366
           +F  M  + +  ++ T+  I   L   G + +A   L  M   G   N Y+YN LI    
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL 212

Query: 367 -GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G+C     + A K++  M S G    + +Y+ L+    +  D  + ++L  EM S G++
Sbjct: 213 PGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLR 267

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P + TY      L    +++ A  +F EM       D  TY   ID LC +G + +A EL
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327

Query: 486 FRAIRDSKYELNIVSYNCLID 506
           +  +R S +  + V+Y  L+D
Sbjct: 328 YVKMRASSHSPDRVTYITLMD 348


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 205/432 (47%), Gaps = 41/432 (9%)

Query: 112  ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
            +L   L   +  +  L L +    AG  P +  +++LI+ +C+ G +  G ++LG +   
Sbjct: 1152 VLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETK 1211

Query: 172  CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
             F P  VT+ SLI  L  +  + +  +LF + R     P+V  YN++I+ LC+      A
Sbjct: 1212 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQA 1271

Query: 232  LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            + + ++M      F   C P+ +T+NT+I GLC EG V KA+    +     +NP+ ++Y
Sbjct: 1272 MVILKQM------FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1325

Query: 292  TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS------------------------ 327
            T +I GFC   +   A  L +EMM +G  PDVVTF                         
Sbjct: 1326 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1385

Query: 328  -----------VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
                       V++  LCK   +  A  +LE M+ + V P+ + Y TLIDG+  ++ +  
Sbjct: 1386 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 1445

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            ARK+F  ME  G   D+VS N +I  YC+   + EA+   S M   G  P   TY T+  
Sbjct: 1446 ARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 1505

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            G  +   +  AL+   +M +     +  TY++ I+G CK+G    A  LF  ++      
Sbjct: 1506 GYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSP 1565

Query: 497  NIVSYNCLIDGL 508
            N+V+Y  LI  L
Sbjct: 1566 NVVTYTILIGSL 1577



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V  +N +   L K +     + + K++ ++G  PDI T + LI   C  G V      
Sbjct: 1250 PNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 1309

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L   +R    PN +++T LI G C    +M A+ L  +       PDV T+  LI+GL  
Sbjct: 1310 LREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVV 1369

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G    AL + E+M            P+   YN +I GLCK+  +  AK +  +M ++N+
Sbjct: 1370 AGKVSEALIVREKMTERQ------VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             PD   Y ++I GF  + +  +A+++F  M  +G+ PD+V+ + ++   C+ G M +A  
Sbjct: 1424 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAIL 1483

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             +  M   G  P+ +TY T+I GY     ++ A +    M    C  +VV+Y++LIN YC
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            K  D + A  L++ M ++ + P VVTY  L   LF+  +V RA   F+ M  NH + +  
Sbjct: 1544 KTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1603

Query: 465  TYNNFIDGL 473
            T +  ++GL
Sbjct: 1604 TLHYLVNGL 1612



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 160/362 (44%), Gaps = 27/362 (7%)

Query: 93   IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
            + + M R H   P V +F  L   L         L + +++    +FPD+  +++LI+  
Sbjct: 1345 LVEMMGRGHT--PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402

Query: 153  CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            CK   +     +L  +L     P+   + +LI G      + +A  +F         PD+
Sbjct: 1403 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             + N +I G C+ G    A+     M        V C P+  TY T+I G  K+G ++ A
Sbjct: 1463 VSCNAMIKGYCQFGMMSEAILCMSNMRK------VGCIPDEFTYTTVISGYAKQGNLNGA 1516

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
                  M      P+VVTY+S+I G+C   D + A+ LF  M  + + P+VVT+++++  
Sbjct: 1517 LRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGS 1576

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY------------CLTDKIDHARKL 380
            L K  K+ +A    E M+    +PN  T + L++G             C T ++     L
Sbjct: 1577 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL 1636

Query: 381  FVSMESNGCMHDV-----VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
             V  +    + D+      +YN +I   C++  + EAL   + M  KG  P  +T+ +L 
Sbjct: 1637 LVVFKK--LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1694

Query: 436  LG 437
             G
Sbjct: 1695 YG 1696



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 1/258 (0%)

Query: 251  PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN-PDVVTYTSVIRGFCYANDWNEAKR 309
            P       ++      G + KA ++  +++++  + P+V     +++       W++A++
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            L+ EM+ +    D  +  V++  LC   ++++  +L+E     G  P+   YN LIDGYC
Sbjct: 1134 LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1193

Query: 370  LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                +     L   ME+ G +  +V+Y +LINW  K  D+E+  SL+ EM  +G  P V 
Sbjct: 1194 RRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1253

Query: 430  TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
             YN++   L +     +A+ +  +M  +    D  T+N  I GLC  G V +A    R  
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1313

Query: 490  RDSKYELNIVSYNCLIDG 507
               +   N +SY  LI G
Sbjct: 1314 IRRELNPNQLSYTPLIHG 1331



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 6/299 (2%)

Query: 210  PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            P+V   N L+  L        A  L++EM       G     +  +   ++ GLC E  V
Sbjct: 1110 PEVTHCNRLLKLLVEQRRWDDARKLYDEM------LGKDSGADNYSTCVLVRGLCLERRV 1163

Query: 270  DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            ++  +L          P VV Y  +I G+C   D      L  EM  +G  P +VT+  +
Sbjct: 1164 EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSL 1223

Query: 330  MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
            ++ L K G ++K   L   M  RG +PN   YN++ID  C       A  +   M ++GC
Sbjct: 1224 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGC 1283

Query: 390  MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              D++++NTLI   C    V +A     E + + + P  ++Y  L  G     ++  A  
Sbjct: 1284 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1343

Query: 450  LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L  EM       D  T+   I GL  +G V EAL +   + + +   ++  YN LI GL
Sbjct: 1344 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 1/240 (0%)

Query: 270  DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSV 328
            D   +    M      P      +++  +  A    +A ++   + +Q G  P+V   + 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 329  IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            ++  L +  + D A +L + M+ +    + Y+   L+ G CL  +++   KL  +    G
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 389  CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            C+  VV YN LI+ YC+  D+   L L  EM +KG  PT+VTY +L   L +   +E+  
Sbjct: 1178 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIG 1237

Query: 449  KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             LF EMR+   + +   YN+ ID LCK     +A+ + + +  S  + +I+++N LI GL
Sbjct: 1238 SLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1297



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 130/319 (40%), Gaps = 56/319 (17%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V+ +N+L   L K +      ++ + +    + PD + ++ LI+ F +   +     +
Sbjct: 1390 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1449

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +      P+ V+  ++IKG C    + EA    +  R   C PD FTY T+I+G  +
Sbjct: 1450 FEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1509

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G+   AL    +M          CKPN VTY+++I+G CK G  D A+ LF  M+ E +
Sbjct: 1510 QGNLNGALRWLCDMIKRK------CKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEAL 1563

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT------------------- 325
            +P+VVTYT +I      +    A   F  M+     P+ VT                   
Sbjct: 1564 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 1623

Query: 326  -------------------------------FSVIMDELCKNGKMDKASRLLELMIWRGV 354
                                           ++ I+  LC++  + +A      M  +G 
Sbjct: 1624 CCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGY 1683

Query: 355  NPNTYTYNTLIDGYCLTDK 373
             PN  T+ +L+ G+C   K
Sbjct: 1684 VPNPITFLSLLYGFCSVGK 1702


>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
          Length = 348

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 173/305 (56%), Gaps = 12/305 (3%)

Query: 76  SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           SSG  DI     ++A+ +F  M+R  P P  +  F+ LF  +AK K Y+ VLSL K++  
Sbjct: 54  SSGIADIK---KDDAVDLFQSMIRSRPLPSIID-FSRLFSAVAKTKQYELVLSLCKQMEL 109

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            G+   IYT SI+INCFC+  ++   F VLG+IL+  + P+ VTF++L+ GLC E R+ E
Sbjct: 110 QGIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSE 169

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  +  +       P++ T NTL+NGLC       A  L + M     E G  C+P+  T
Sbjct: 170 AVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMV----EHG--CQPDQFT 223

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  I++ +CK G    A +L  KM+D+ + P VVTY  +I   C   +++EA  LF EM 
Sbjct: 224 YGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEME 283

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI- 374
            +G++ DV+T++ ++   C  G+ D  ++LL  MI R + PN  T++ LID +    K+ 
Sbjct: 284 REGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGKLI 343

Query: 375 -DHAR 378
            +H R
Sbjct: 344 NEHRR 348



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 140/276 (50%), Gaps = 6/276 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A++LF+ M            P+ + ++ +   + K    +    L  +M+ + I   + T
Sbjct: 65  AVDLFQSMIRSRP------LPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIYT 118

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
            + VI  FC       A  +  +++  G +PD VTFS +++ LC  G++ +A  +++ M+
Sbjct: 119 LSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMV 178

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
              V PN  T NTL++G CL D++  A  L   M  +GC  D  +Y  ++N  CK+ +  
Sbjct: 179 EMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTV 238

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            AL L  +M  K +KP VVTYN +   L +    + AL LF+EM R  + AD  TYN+ I
Sbjct: 239 SALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLI 298

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            G C +G   +  +L R +       N+V+++ LID
Sbjct: 299 GGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALID 334



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 134/268 (50%), Gaps = 6/268 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P +  ++ L + + +T    + L+L ++M        +       T + +I+  C+   +
Sbjct: 79  PSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIY------TLSIVINCFCRRRKL 132

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A  +  K+      PD VT+++++ G C     +EA  +   M++  V+P++VT + +
Sbjct: 133 GFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKVRPNLVTLNTL 192

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ LC   ++ +A  L++ M+  G  P+ +TY  +++  C +     A  L   ME    
Sbjct: 193 VNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALDLLRKMEDKKV 252

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              VV+YN +I+  CKN + +EALSL++EM  +GIK  V+TYN+L  G     + +   +
Sbjct: 253 KPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQ 312

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           L  +M   ++  +  T++  ID   K G
Sbjct: 313 LLRDMITRNITPNVVTFSALIDCFVKEG 340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 103/204 (50%)

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           ++A  LF  M+     P ++ FS +   + K  + +    L + M  +G+  + YT + +
Sbjct: 63  DDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQGIAHSIYTLSIV 122

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           I+ +C   K+  A  +   +   G   D V+++TL+N  C    V EA+ +   M+   +
Sbjct: 123 INCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEAVVIVDRMVEMKV 182

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           +P +VT NTL  GL    QV  A  L D M  +    D +TY   ++ +CKSG  + AL+
Sbjct: 183 RPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALD 242

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           L R + D K +  +V+YN +ID L
Sbjct: 243 LLRKMEDKKVKPQVVTYNMIIDSL 266


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 202/390 (51%), Gaps = 47/390 (12%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D+Y+  I+I   C+ G +   F +L  +    F+PN V +T+LI G C +  I +A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 201 --------------------------------------TKHRVFACEPDVFTYNTLINGL 222
                                                  +H VF   P+++TYN ++N L
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF---PNLYTYNCVMNQL 278

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G T  A  +F+EM     E GV C  N VTYNT+I GLC+E   ++A ++  +MK  
Sbjct: 279 CKDGRTKDAFKVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANKVMDQMKSY 332

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            INP+++TY ++I GFC      +A  L  ++  +G+ P +VT++V++   C+ G    A
Sbjct: 333 VINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGA 392

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           +++++ M  RG+ P+  TY  LID +  +D ++ A +L  SME  G + DV +Y+ LI+ 
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHG 452

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C    + EA  L+  M+ K ++P  V YNT+ LG  +     RAL+LF +M    +A +
Sbjct: 453 FCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPN 512

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             +Y+  I  LCK   + EA +L   + DS
Sbjct: 513 VASYSYLIRVLCKERKLKEAEDLVEKMIDS 542



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 178/329 (54%), Gaps = 6/329 (1%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           +F  +IKG C    I ++  L  + R F   P+V  Y TLI+G C+ G    A +LF EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
               G+FG+V   N  TY  +I GL K G   +  E++ KM++  + P++ TY  V+   
Sbjct: 225 ----GKFGLV--ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      +A ++F EM ++GV  ++VT++ ++  LC+  K ++A+++++ M    +NPN 
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL 338

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTLIDG+C   K+  A  L   ++S G    +V+YN L++ +C+  D   A  +  E
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M  +GIKP+ VTY  L         +E A++L   M    +  D +TY+  I G C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + EA  LF+++ +   E N V YN +I G
Sbjct: 459 MNEASRLFKSMVEKMLEPNEVIYNTMILG 487



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 172/319 (53%), Gaps = 6/319 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ +L   L KN        +++++   G+FP++YT++ ++N  CK GR    F V   +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                + N VT+ +LI GLC E +  EA  +  + + +   P++ TYNTLI+G C  G  
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL 354

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL+L  ++ +          P+ VTYN ++ G C++G    A ++  +M++  I P  
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT +I  F  +++   A +L   M + G+ PDV T+SV++   C  G+M++ASRL + 
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ + + PN   YNT+I GYC       A +LF  ME      +V SY+ LI   CK + 
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528

Query: 409 VEEALSLYSEMLSKGIKPT 427
           ++EA  L  +M+  GI P+
Sbjct: 529 LKEAEDLVEKMIDSGIDPS 547



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 188/364 (51%), Gaps = 10/364 (2%)

Query: 94  FDYMLRMHP---SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           FD ++ +     SP  V    ++ GC  K +  +    LF  +   GL  + +T+++LI+
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKFGLVANEWTYTVLIH 241

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
              K G    GF +  ++      PN  T+  ++  LC + R  +A  +F + R      
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           ++ TYNTLI GLCR      A  + ++M +       V  PN +TYNT+IDG C  G + 
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKS------YVINPNLITYNTLIDGFCSVGKLG 355

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           KA  L   +K   ++P +VTY  ++ GFC   D + A ++  EM ++G++P  VT+++++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D   ++  M+ A +L   M   G+ P+ +TY+ LI G+C+  +++ A +LF SM      
Sbjct: 416 DTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLE 475

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + V YNT+I  YCK      AL L+ +M  K + P V +Y+ L   L +  +++ A  L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDL 535

Query: 451 FDEM 454
            ++M
Sbjct: 536 VEKM 539



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K  +  Y  II+   +   +D +   F +M D+   P    + +++     ++ +N+   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            F E   + V  DV +F +++   C+ G+++K+  LL  +   G +PN   Y TLIDG C
Sbjct: 151 FFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              +I+ A+ LF  M   G + +  +Y  LI+   KN   ++   +Y +M   G+ P + 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN +   L +  + + A K+FDEMR   V+ +  TYN  I GLC+     EA ++   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +      N+++YN LIDG 
Sbjct: 330 KSYVINPNLITYNTLIDGF 348



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G  +  F   +  L    + E        Y  +I  +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P    F+ ++  +  +   ++          + V  + Y++  +I G C   +I+ + 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L V +   G   +VV Y TLI+  CK  ++E+A  L+ EM   G+     TY  L  GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           F+    ++  +++++M+ + V  + YTYN  ++ LCK G   +A ++F  +R+     NI
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303

Query: 499 VSYNCLIDGL 508
           V+YN LI GL
Sbjct: 304 VTYNTLIGGL 313


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 220/458 (48%), Gaps = 62/458 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P  S+++ +   L +    +    LF+ + S G+ PD+YT++ILI+ FCK G +      
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345

Query: 160 --------------------HGFV----------VLGRILRSCFTPNAVTFTSLIKGLCA 189
                               H ++          +  R++ +   PN +T+++L+ GLC 
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405

Query: 190 ESRIMEAAALFTK----------------HRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
              I +A  ++TK                    +  P+V TY  LI+GLC+    + A  
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L + M + NG     C+PN + Y+ +IDG CK G +D A+E+FL+M      P V TYTS
Sbjct: 466 LLDAMLS-NG-----CEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTS 519

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I         + A ++  +M++    P+VVT++ ++D LC+ G+  KA +LL +M  +G
Sbjct: 520 LIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG 579

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            +PN  TY  LIDG   + K+D + +LF+ M + GC  + V+Y  LIN  C    ++EA 
Sbjct: 580 CSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAH 639

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           SL SEM        +  Y ++  G  +  +   +L L +E+  +        Y   ID  
Sbjct: 640 SLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNF 697

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVS---YNCLIDGL 508
            K+G + EALEL + + +    LNI S   Y  LI  L
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQAL 735



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 196/408 (48%), Gaps = 22/408 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    + K +   G  PD  T+S +I   C+  +V   F++   +      P
Sbjct: 262 CLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A + F + R   C  +V TY  L++   +      A ++F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---------------- 279
             M +        C PNT+TY+ ++DGLCK G + KA E++ K+                
Sbjct: 382 NRMIDAG------CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGK 435

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             ++I P+VVTY ++I G C A+   +A+ L   M+  G +P+ + +  ++D  CK GK+
Sbjct: 436 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKI 495

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P  +TY +LID      ++D A K+   M  + C  +VV+Y  +
Sbjct: 496 DNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAM 555

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C+  + ++AL L S M  KG  P VVTY  L  GL +  +V+ +L+LF +M     
Sbjct: 556 IDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGC 615

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A +  TY   I+  C +G + EA  L   ++ + +   +  Y  ++ G
Sbjct: 616 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQG 663



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 203/438 (46%), Gaps = 29/438 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I + M++   +P P S FN L       + Y     L KR+   G  P    ++I I   
Sbjct: 164 IINMMMKEGCNPNP-SLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSI 222

Query: 153 CKMGRV-SHGFVVLGR-----ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           C    + S   + L       +L S    N V   +  + LC   +   A  +       
Sbjct: 223 CGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK 282

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD  TY+ +I  LC       A  LF+EM +      V   P+  TY  +ID  CK 
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS------VGVNPDVYTYTILIDSFCKA 336

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A+  F +M+    + +VVTYT+++  +  A    +A  +F  M+D G  P+ +T+
Sbjct: 337 GLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITY 396

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVN----------------PNTYTYNTLIDGYCL 370
           S ++D LCK G++ KA  +   +I    N                PN  TY  LIDG C 
Sbjct: 397 SALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCK 456

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+  A++L  +M SNGC  + + Y+ LI+ +CK   ++ A  ++  M   G  PTV T
Sbjct: 457 AHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHT 516

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y +L   +F+  +++ A+K+  +M  +    +  TY   IDGLC+ G   +AL+L   + 
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 576

Query: 491 DSKYELNIVSYNCLIDGL 508
           +     N+V+Y  LIDGL
Sbjct: 577 EKGCSPNVVTYTALIDGL 594



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 213/505 (42%), Gaps = 79/505 (15%)

Query: 60  VKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK 119
           V   A+L+  L+  C SS        T +  L  F Y        P  +++N L   LA 
Sbjct: 6   VAATAALRSSLRRACSSSSH------TADPELKDFGYR-------PSGATYNALVQVLAT 52

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
               D    + K ++ +G   D +T        CK GR S   V+   I R  F  + V 
Sbjct: 53  AGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM---IEREDFKLDTVL 109

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
            T +I GL   S   EA +   + R  +C P+V TY TL+ G  +       L   + + 
Sbjct: 110 CTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQ----LGWCKRII 165

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI---- 295
           N   + G  C PN   +N+++   C       A +L  +M D    P  V Y   I    
Sbjct: 166 NMMMKEG--CNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSIC 223

Query: 296 -------------------------------------RGFCYANDWNEAKRLFIEMMDQG 318
                                                R  C    ++ A ++   MM +G
Sbjct: 224 GGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKG 283

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD  T+S ++  LC+  K++KA  L + M   GVNP+ YTY  LID +C    I+ AR
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQAR 343

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             F  M S GC  +VV+Y  L++ Y K K + +A  +++ M+  G  P  +TY+ L  GL
Sbjct: 344 SWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGL 403

Query: 439 FEIHQVERALKL----------------FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            +  ++++A ++                F+    + +A +  TY   IDGLCK+  V++A
Sbjct: 404 CKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA 463

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
            EL  A+  +  E N + Y+ LIDG
Sbjct: 464 QELLDAMLSNGCEPNHIIYDALIDG 488



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 146/350 (41%), Gaps = 54/350 (15%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D ML     P  +  ++ L     K    D    +F R++  G  P ++T++ LI+  
Sbjct: 466 LLDAMLSNGCEPNHII-YDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAM 524

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K  R+     VL +++ S  TPN VT+T++I GLC      +A  L +      C P+V
Sbjct: 525 FKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNV 584

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY  LI+GL ++G   ++L LF +M+         C PN VTY  +I+  C  G +D+A
Sbjct: 585 VTYTALIDGLGKSGKVDLSLQLFIQMSTKG------CAPNYVTYRVLINHCCAAGLLDEA 638

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCY-------------------------------- 300
             L  +MK       +  Y SV++GF                                  
Sbjct: 639 HSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFS 698

Query: 301 -ANDWNEAKRLFIEMMDQGVQPDVVT---FSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
            A    EA  L  EMM+     ++ +   ++ ++  LC   +++KA  L   +  +GV P
Sbjct: 699 KAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVP 758

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
               +  LI G    +K + A +L  S+   G           +NW   N
Sbjct: 759 ELSVFVCLIKGLIKVNKWNEALQLCYSICDEG-----------VNWQSNN 797



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 45/299 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   + K++  D  + +  ++  +   P++ T++ +I+  C++G       +
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     +PN VT+T+LI GL    ++  +  LF +     C P+  TY  LIN  C 
Sbjct: 572 LSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCA 631

Query: 225 TG-----HT----------------------------IVALNLFEEMANGNGEFGVVCKP 251
            G     H+                            I +L L EE+ +     G V  P
Sbjct: 632 AGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELES----HGTV--P 685

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT---YTSVIRGFCYANDWNEAK 308
               Y  +ID   K G +++A EL  +M + + + ++ +   YTS+I+  C A+   +A 
Sbjct: 686 IAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAF 745

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            L+ E+  +GV P++  F  ++  L K  K ++A +L   +   GVN   +  N   DG
Sbjct: 746 ELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN---WQSNNSFDG 801



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 3/196 (1%)

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           E+ D G +P   T++ ++  L   G+MD   R+ + M   G   + +T        C   
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +   A    V +E      D V    +I+   +    +EA+S    M      P VVTY 
Sbjct: 90  RWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           TL  G  +  Q+    ++ + M +     +   +N+ +   C +     A +L + + D 
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 493 KYELNIVSYNCLIDGL 508
                 V+YN  I  +
Sbjct: 207 GCPPGYVAYNIFIGSI 222


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 195/365 (53%), Gaps = 10/365 (2%)

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+++ILI   C+   V    V++  ++    + N  T+T LIKGLC E RI +A  L  +
Sbjct: 250 YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDE 309

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
             +    P V+TYN +I+G C++G    AL + + +   NG     C P+  TYN++I G
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDWTYNSLIYG 363

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LC  G +D+A+EL          P V+T+T++I G+C A   ++A R+   M+    + D
Sbjct: 364 LCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +  + V+++ L K  ++ +A   L  M   G+ PN  TY ++IDGYC    +  A ++F 
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFK 482

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ME  GC  +  +Y +LI    ++K + +A++L ++M   GI P V+TY TL  G  + H
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + + A +LF+ M +N +  D   YN   D LCKSG    A E +  +      L  V+Y 
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYT 599

Query: 503 CLIDG 507
            L+DG
Sbjct: 600 SLVDG 604



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 211/439 (48%), Gaps = 47/439 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K+      L +   +   G  PD +T++ LI   C  G++     +
Sbjct: 317 PSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEEL 375

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEA---------------------------- 196
           L   +   FTP  +TFT+LI G C   RI +A                            
Sbjct: 376 LNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIK 435

Query: 197 -----AALFTKHRVFA--CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                 A  T + +FA    P+V TY ++I+G C+ G    AL +F+ M +        C
Sbjct: 436 KCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG------C 489

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN  TY ++I GL ++  + KA  L  KM+++ I P V+TYT++I+G C  ++++ A R
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 549

Query: 310 LFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           LF EMM+Q G+ PD   ++V+ D LCK+G+ ++A   L   + +GV     TY +L+DG+
Sbjct: 550 LF-EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGF 605

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
                 D A  L   M + GC  D+ +Y+ L+   CK K + EALS+  +M   G+K  +
Sbjct: 606 SKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           V Y  +   + +  + + A  LF+EM  +       TY  FI   CK G + EA  L   
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725

Query: 489 IRDSKYELNIVSYNCLIDG 507
           +       ++V+YN  I+G
Sbjct: 726 MERDGVTPDVVTYNIFING 744



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 186/381 (48%), Gaps = 11/381 (2%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGR--VSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L+  L   GL PD  T++ +I  +CK G   ++H +  L R   S    +  T  +L+ G
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR--ESGMQMDTYTCNALLLG 223

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
            C  S + +A  L     +  C  + ++Y  LI GLC       AL L   M +      
Sbjct: 224 YCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDG---- 279

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
             C  N  TY  +I GLCKEG +  A+ L  +M    + P V TY ++I G+C +    +
Sbjct: 280 --CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKD 337

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A  +   M   G  PD  T++ ++  LC  GK+D+A  LL   I RG  P   T+  LI+
Sbjct: 338 ALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLIN 396

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           GYC  ++ID A ++  +M S+ C  D+ +Y  LIN   K   ++EA    +EM + G+ P
Sbjct: 397 GYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAP 456

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            VVTY ++  G  ++  V  AL++F  M       + +TY + I GL +   + +A+ L 
Sbjct: 457 NVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
             +++      +++Y  LI G
Sbjct: 517 TKMQEDGITPGVITYTTLIQG 537



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 184/422 (43%), Gaps = 42/422 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++ +L   L K             + + GL P++ T++ +I+ +CK+G V     V  
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFK 482

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PNA T+ SLI GL  + ++ +A AL TK +     P V TY TLI G C+  
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542

Query: 227 HTIVALNLFEEM-ANG--------NGEFGVVCKPN-----------------TVTYNTII 260
               A  LFE M  NG        N     +CK                    VTY +++
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLV 602

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DG  K G  D A  L  KM +E    D+ TY+ +++  C     NEA  +  +M   GV+
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            ++V +++I+ E+ K GK D A  L   MI  G  P+  TY   I  YC   +I+ A  L
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHL 722

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF----- 435
              ME +G   DVV+YN  IN       ++ A S    M+    +P   TY  L      
Sbjct: 723 IGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782

Query: 436 LGLFEIHQVERA-----------LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           + L   H V+ +            +L + M ++ +     TY++ I G CK+  + EA  
Sbjct: 783 MSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACV 842

Query: 485 LF 486
           L 
Sbjct: 843 LL 844



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K   +D    LF+ +   GL PD   +++L +  CK GR    +  
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +R       VT+TSL+ G         AA L  K     C+ D++TY+ L+  LC+
Sbjct: 586 L---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++ ++M       GV C  N V Y  II  + KEG  D AK LF +M     
Sbjct: 643 QKKLNEALSILDQMTVS----GVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TYT  I  +C      EA+ L  EM   GV PDVVT+++ ++     G +D+A  
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTD----------------KIDHARKLFVSMESNG 388
            L+ M+     PN +TY  L+  +                    +++   +L   M  +G
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               VV+Y+++I  +CK   +EEA  L   ML K I P    Y  L     +I    +A+
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAV 876

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               +M          +Y+  I GLC  G    A  LF  +    Y  N V++  L DGL
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 71/328 (21%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT-------------------- 290
           P+TVTYNT+I   CK+G +  A   F  +++  +  D  T                    
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 291 ---------------YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                          YT +I+G C A    EA  L   M+  G   ++ T+++++  LCK
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G++  A  LL+ M  RGV P+ +TYN +IDGYC + ++  A  +   ME NGC  D  +
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL----- 450
           YN+LI   C  K ++EA  L +  +++G  PTV+T+  L  G  +  +++ AL++     
Sbjct: 357 YNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 451 ------------------------------FDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                                          +EM  N +A +  TY + IDG CK G V 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            ALE+F+ +       N  +Y  LI GL
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGL 503



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 151/326 (46%), Gaps = 15/326 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL I D M  +      + ++ I+   + K   +D   SLF  + S+G  P   T+++
Sbjct: 647 NEALSILDQM-TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I+ +CK+GR+     ++G + R   TP+ VT+   I G      I  A +   +    +
Sbjct: 706 FISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDAS 765

Query: 208 CEPDVFTYNTLINGLCR----TGHTI--------VALNLFEEMANGNGEFGVVCKPNTVT 255
           CEP+ +TY  L+    +      H +        + LN+  ++     + G+   P  VT
Sbjct: 766 CEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL--NPTVVT 823

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y++II G CK   +++A  L   M  ++I+P+   YT +I+  C    + +A     +M+
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMI 883

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G QP + ++  ++  LC  G  D+A  L   ++    N N   +  L DG      +D
Sbjct: 884 EFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943

Query: 376 HARKLFVSMESNGCMHDVVSYNTLIN 401
              +L  +M++  C  D  SY+ L +
Sbjct: 944 FCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN  +  L +    +   +L+  +  E + PD VTY ++I  +C       A R F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G+Q D  T + ++   C+   + KA  LL +M   G   N Y+Y  LI G C    + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   M  +GC  ++ +Y  LI   CK   + +A  L  EM  +G+ P+V TYN + 
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +  +++ AL +   M +N    D +TYN+ I GLC  G + EA EL        + 
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 496 LNIVSYNCLIDG 507
             ++++  LI+G
Sbjct: 386 PTVITFTNLING 397



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 101/200 (50%)

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L+  ++ +G+ PD VT++ ++   CK G +  A R   L+   G+  +TYT N L+ GY
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C T  +  A  L + M   GC  +  SY  LI   C+ + V EAL L   M+  G    +
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TY  L  GL +  ++  A  L DEM    V    +TYN  IDG CKSG + +AL +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +  +    +  +YN LI GL
Sbjct: 345 MEQNGCNPDDWTYNSLIYGL 364



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%)

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN  +      D  ++  KL+  +   G + D V+YNT+I  YCK   +  A   +  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G++    T N L LG      + +A  L   M       + Y+Y   I GLC++  V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EAL L   +      LN+ +Y  LI GL
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGL 294


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 224/434 (51%), Gaps = 25/434 (5%)

Query: 89  EALCIFDYM-LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +AL + D M LR   + PP+    +   C  +   + + +   + L++ G   D    ++
Sbjct: 126 DALTVLDEMPLRGCAATPPMCHVILEAAC--RGGGFRSAVRALQVLHAKGCTLDSGNCNL 183

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR-------------IM 194
           +++  C+ G V  G  +L ++      P+ V++ +++KGLC   R             + 
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVH 243

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA +   +H    C PD+  Y T+I+G+C+ GH  VA ++   M +    +G+  KPN V
Sbjct: 244 EALSQMPEH---GCTPDLRMYATIIDGICKDGHHEVANDILSRMPS----YGL--KPNVV 294

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YNT++ GLC     ++A++L  +M  E+   D VT+  ++  FC     +    L  +M
Sbjct: 295 CYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 354

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ G  PDV+T++ +++  CK G +D+A  LL+ M   G  PNT +Y  ++ G C  ++ 
Sbjct: 355 LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 414

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             A++L   M   GC+ + V++NTLIN+ CK    E+A+ L  +ML  G  P +++Y+T+
Sbjct: 415 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTV 474

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GL +  + E AL+L + M    +  +T  Y++    L + G   + +++F +I+D+  
Sbjct: 475 IDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATV 534

Query: 495 ELNIVSYNCLIDGL 508
             +   YN +I  L
Sbjct: 535 RSDAALYNAVISSL 548



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 198/413 (47%), Gaps = 25/413 (6%)

Query: 97  MLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSL----------FKRLNSAGLFPDIY 143
           +LR  PS    P + S+N +   L   K +D V  L            ++   G  PD+ 
Sbjct: 200 LLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLR 259

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
            ++ +I+  CK G       +L R+      PN V + +++KGLC+  R  EA  L  + 
Sbjct: 260 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 319

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
               C  D  T+N L++  C+ G     + L E+M     E G  C P+ +TY T+I+G 
Sbjct: 320 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML----EHG--CIPDVITYTTVINGF 373

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CKEG VD+A  L   M      P+ ++YT V++G C A  W +A+ L   M+ QG  P+ 
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VTF+ +++ +CK G  ++A  LL+ M+  G +P+  +Y+T+IDG     K + A +L   
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M + G   + + Y+++ +   +    ++ + ++  +    ++     YN +   L +  +
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF------RAIR 490
            +RA+  F  M  N    +  TY   I GL   G V EA +L       RA+R
Sbjct: 554 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVR 606



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 197/424 (46%), Gaps = 56/424 (13%)

Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
           + L++AG    +  ++ +I  +C+ G+V+    +   +      PNA T+  +++ LCA 
Sbjct: 65  RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCAR 121

Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVC 249
             I +A  +  +  +  C       + ++   CR G    A+   + + A G       C
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG-------C 174

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             ++   N ++  +C++G VD+  EL  K+      PD+V+Y +V++G C A  W++ + 
Sbjct: 175 TLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEE 234

Query: 310 LFIEMM----------DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
           L +EM+          + G  PD+  ++ I+D +CK+G  + A+ +L  M   G+ PN  
Sbjct: 235 LMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVV 294

Query: 360 TYNTLIDGYCLTDK-----------------------------------IDHARKLFVSM 384
            YNT++ G C  ++                                   +D   +L   M
Sbjct: 295 CYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 354

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
             +GC+ DV++Y T+IN +CK   V+EA+ L   M + G KP  ++Y  +  GL    + 
Sbjct: 355 LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 414

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A +L   M +     +  T+N  I+ +CK G   +A+EL + +  +    +++SY+ +
Sbjct: 415 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTV 474

Query: 505 IDGL 508
           IDGL
Sbjct: 475 IDGL 478



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 135/337 (40%), Gaps = 57/337 (16%)

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           + LI  LC  G T  A    +   +  G          V YN +I G C+ G V  A+ L
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG---------VVAYNAMIAGYCRAGQVAAARRL 98

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
              +    + P+  TY  ++R  C      +A  +  EM  +G         VI++  C+
Sbjct: 99  AAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G    A R L+++  +G   ++   N ++   C    +D   +L   + S GC  D+VS
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215

Query: 396 YNTLINWYCKNK---DVE----------EALS---------------------------- 414
           YN ++   C  K   DVE          EALS                            
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 275

Query: 415 ----LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
               + S M S G+KP VV YNT+  GL    + E A  L  EM +     D  T+N  +
Sbjct: 276 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 335

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  C++G V   +EL   + +     ++++Y  +I+G
Sbjct: 336 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVING 372


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 211/422 (50%), Gaps = 9/422 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           ++AL +FD M       P V+ +NIL     K K + T + L+ RL   + ++P++ TH+
Sbjct: 201 DDALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+I+   K GRV     +  R+ ++    +  T++SLI GLC    + +A ++F +    
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               DV TYNT++ G CR G    +L L+  M + N         N V+YN +I GL + 
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-------VNIVSYNILIKGLLEN 372

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +D+A  ++  M  +    D  TY   I G C     N+A  +  E+   G   DV  +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + I+D LCK  ++++AS L++ M   GV  N++  N LI G     ++  A      M  
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NGC   VVSYN LI   CK     EA +   EML  G KP + TY+ L  GL    +++ 
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+L+ +  ++ +  D   +N  I GLC  G + +A+ +   +       N+V+YN L++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 507 GL 508
           G 
Sbjct: 613 GF 614



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 219/491 (44%), Gaps = 74/491 (15%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++AL +F  M  +    P + S+N L     + K +  V SLF    +AG+ P++ T++
Sbjct: 94  PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI   CK          L  + +  F P+  +++++I  L    ++ +A  LF +    
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV  YN LI+G  +      A+ L++ +   +  +     PN  T+N +I GL K 
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY-----PNVKTHNIMISGLSKC 268

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G VD   +++ +MK      D+ TY+S+I G C A + ++A+ +F E+ ++    DVVT+
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328

Query: 327 SVIMDELCK----------------------------------NGKMDKASRLLELMIWR 352
           + ++   C+                                  NGK+D+A+ +  LM  +
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G   +  TY   I G C+   ++ A  +   +ES+G   DV +Y ++I+  CK K +EEA
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448

Query: 413 LSLYSEMLSKGI-----------------------------------KPTVVTYNTLFLG 437
            +L  EM   G+                                   +PTVV+YN L  G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +  +   A     EM  N    D  TY+  + GLC+   +  ALEL+     S  E +
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568

Query: 498 IVSYNCLIDGL 508
           ++ +N LI GL
Sbjct: 569 VMMHNILIHGL 579



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 194/444 (43%), Gaps = 63/444 (14%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ ++D +L      P V + NI+   L+K    D  L +++R+       D+YT+S LI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297

Query: 150 NCFCKMGRVSH-------------------------GF---------VVLGRILRSCFTP 175
           +  C  G V                           GF         + L RI+    + 
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N V++  LIKGL    +I EA  ++          D  TY   I+GLC  G+   AL + 
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417

Query: 236 EEMANGNGEFGV---------VCKP--------------------NTVTYNTIIDGLCKE 266
           +E+ +  G   V         +CK                     N+   N +I GL ++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             + +A     +M      P VV+Y  +I G C A  + EA     EM++ G +PD+ T+
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++  LC++ K+D A  L    +  G+  +   +N LI G C   K+D A  +  +ME 
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C  ++V+YNTL+  + K  D   A  ++  M   G++P +++YNT+  GL     V  
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657

Query: 447 ALKLFDEMRRNHVAADTYTYNNFI 470
           A++ FD+ R + +    YT+N  +
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 173/346 (50%), Gaps = 27/346 (7%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALF---TKHRVFACEPDVFTY-------NTLINGLCR 224
           P +++   ++K L +E     A ALF   T+H  +A    V+ +         ++N + R
Sbjct: 5   PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-N 283
               IV L   +E           CK +     ++I    K    D+A ++F +M++   
Sbjct: 65  ----IVELIRSQE-----------CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFG 109

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             P + +Y +++  F  A  W + + LF      GV P++ T++V++   CK  + +KA 
Sbjct: 110 CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKAR 169

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
             L+ M   G  P+ ++Y+T+I+      K+D A +LF  M   G   DV  YN LI+ +
Sbjct: 170 GFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF 229

Query: 404 CKNKDVEEALSLYSEMLS-KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            K KD + A+ L+  +L    + P V T+N +  GL +  +V+  LK+++ M++N    D
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YTY++ I GLC +G V +A  +F  + + K  +++V+YN ++ G 
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 6/193 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+NIL   L K   +    +  K +   G  PD+ T+SIL+   C+  ++     +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             + L+S    + +    LI GLC+  ++ +A  +        C  ++ TYNTL+ G  +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G +  A  ++  M      + +  +P+ ++YNTI+ GLC    V  A E F   ++  I
Sbjct: 617 VGDSNRATVIWGYM------YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670

Query: 285 NPDVVTYTSVIRG 297
            P V T+  ++R 
Sbjct: 671 FPTVYTWNILVRA 683



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 35/153 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P + +++IL   L +++  D  L L+ +   +GL  D+  H+ILI+  C +G++      
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591

Query: 160 --------------------HGF----------VVLGRILRSCFTPNAVTFTSLIKGLCA 189
                                GF          V+ G + +    P+ +++ +++KGLC 
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
              +  A   F   R     P V+T+N L+  +
Sbjct: 652 CRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 41/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+  L   LAKN +    L LF  +   G+ PD+  ++ILI+ F K G + +   +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 165 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             R+L+     PN  ++  +I GLC   +  E+  ++ + +      D++TY+TLI+GLC
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK--- 280
            +G+   A  +++EMA    E GV   P+ V YNT+++G  + G +++  EL+  M+   
Sbjct: 302 GSGNLDGATRVYKEMA----ENGV--SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 281 --------------------DENIN-----------PDVVTYTSVIRGFCYANDWNEAKR 309
                               DE I+            D +TY  ++ G C     N+A  
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  E  +     D   +S +++ LC+ G++D+ + +L+ M   G  PN +  N +I+G+ 
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K++ A + F +M S GC   VV+YNTLIN   K +   EA +L  EML KG KP ++
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+ L  GL +  +++ AL L+ +        D   +N  I GLC SG V +AL+L+  +
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +  K   N+V++N L++G 
Sbjct: 596 KQRKCVPNLVTHNTLMEGF 614



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 213/456 (46%), Gaps = 39/456 (8%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++AL IF  M  +    P + S+N L   L ++  +D   S F    + GL P++ T++
Sbjct: 94  PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 153

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI   C+  +      +L  +    F+P+  ++ +LI  L     + +A  LF +    
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV  YN LI+G  + G  + A  ++E +  G   +     PN  +YN +I+GLCK 
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-----PNIPSYNVMINGLCKC 268

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  D++ E++ +MK      D+ TY+++I G C + + + A R++ EM + GV PDVV +
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328

Query: 327 SVIMD--------------------ELCK--------------NGKMDKASRLLELMIWR 352
           + +++                    E C+              N K+D+A  + EL+  +
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
               ++ TY  L+ G C    ++ A  +    E+     D  +Y+++IN  C+   ++E 
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +  +M   G KP     N +  G     ++E AL+ F  M          TYN  I+G
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+    EA  L + +    ++ N+++Y+ L++GL
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 194/364 (53%), Gaps = 7/364 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ L   L  + + D    ++K +   G+ PD+  ++ ++N + + GR+    + L ++
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKV 350

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +        V++  LI+GL   +++ EA +++       C  D  TY  L++GLC+ G+ 
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ EE  NG G+       +T  Y+++I+GLC+EG +D+   +  +M      P+ 
Sbjct: 411 NKALSILEEAENGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
               +VI GF  A+   +A R F  M+ +G  P VVT++ +++ L K  +  +A  L++ 
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +G  PN  TY+ L++G C   K+D A  L+      G   DV  +N +I+  C +  
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           VE+AL LYSEM  +   P +VT+NTL  G +++   ERA K++D + ++  +++ Y   +
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEH 644

Query: 469 FIDG 472
              G
Sbjct: 645 TCQG 648



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 22/351 (6%)

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           SH   V   IL+  F P  V   S         RI+E      + +   C  DV    T+
Sbjct: 40  SHTPYVFHHILKRLFDPKLVAHVS---------RIVE----LIRTQKCKCPEDVAL--TV 84

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I    +      AL++F+ M    G     C+P   +YN++++ L +    D+A+  FL 
Sbjct: 85  IKAYAKNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFFLY 139

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            +   ++P++ TY  +I+  C    +++AK L   M +QG  PDV ++  +++ L KNG 
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYN 397
           M  A +L + M  RGV P+   YN LIDG+     I +A +++  +     ++ ++ SYN
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            +IN  CK    +E+  ++  M        + TY+TL  GL     ++ A +++ EM  N
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V+ D   YN  ++G  ++G + E LEL++ +        +VSYN LI GL
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGL 369


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 222/438 (50%), Gaps = 41/438 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+  L   LAKN +    L LF  +   G+ PD+  ++ILI+ F K G + +   +
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 216

Query: 165 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             R+L+     PN  ++  +I GLC   +  E+  ++ + +      D++TY+TLI+GLC
Sbjct: 217 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 276

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK--- 280
            +G+   A  +++EMA    E GV   P+ V YNT+++G  + G +++  EL+  M+   
Sbjct: 277 GSGNLDGATRVYKEMA----ENGV--SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 330

Query: 281 --------------------DENIN-----------PDVVTYTSVIRGFCYANDWNEAKR 309
                               DE I+            D +TY  ++ G C     N+A  
Sbjct: 331 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 390

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  E  +     D   +S +++ LC+ G++D+ + +L+ M   G  PN Y  N +I+G+ 
Sbjct: 391 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFV 450

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K++ A + F +M S GC   VV+YNTLIN   K +   EA +L  EML KG KP ++
Sbjct: 451 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI 510

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+ L  GL +  +++ AL L+ +        D   +N  I GLC SG V +AL+L+  +
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570

Query: 490 RDSKYELNIVSYNCLIDG 507
           +      N+V++N L++G
Sbjct: 571 KQRNCVPNLVTHNTLMEG 588



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 208/399 (52%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ L   L  + + D    ++K +   G+ PD+  ++ ++N + + GR+    + L ++
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKV 325

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +        V++  LI+GL   +++ EA +++       C  D  TY  L++GLC+ G+ 
Sbjct: 326 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ EE  NG G+       +T  Y+++I+GLC+EG +D+   +  +M      P+ 
Sbjct: 386 NKALSILEEAENGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
               +VI GF  A+   +A R F  M+ +G  P VVT++ +++ L K  +  +A  L++ 
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 499

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +G  PN  TY+ L++G C   K+D A  L+      G   DV  +N +I+  C +  
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           VE+AL LYSEM  +   P +VT+NTL  G +++   ERA K++D + +  +  D  +YN 
Sbjct: 560 VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNI 619

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            + GLC    + +A+       D       +++N L+ G
Sbjct: 620 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 213/456 (46%), Gaps = 39/456 (8%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++AL IF  M  +    P + S+N L   L ++  +D   S F    + GL P++ T++
Sbjct: 69  PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 128

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI   C+  +      +L  +    F+P+  ++ +LI  L     + +A  LF +    
Sbjct: 129 ILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 188

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV  YN LI+G  + G  + A  ++E +  G   +     PN  +YN +I+GLCK 
Sbjct: 189 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-----PNIPSYNVMINGLCKC 243

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  D++ E++ +MK      D+ TY+++I G C + + + A R++ EM + GV PDVV +
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303

Query: 327 SVIMD------------ELCK----------------------NGKMDKASRLLELMIWR 352
           + +++            EL K                      N K+D+A  + EL+  +
Sbjct: 304 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEK 363

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
               ++ TY  L+ G C    ++ A  +    E+     D  +Y+++IN  C+   ++E 
Sbjct: 364 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 423

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +  +M   G KP     N +  G     ++E AL+ F  M          TYN  I+G
Sbjct: 424 AGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 483

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+    EA  L + +    ++ N+++Y+ L++GL
Sbjct: 484 LSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGL 519



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 137/262 (52%), Gaps = 10/262 (3%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ +   L +    D V  +  ++   G  P+ Y  + +IN F +  ++       G +
Sbjct: 406 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM 465

Query: 169 L-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           + + CF P  VT+ +LI GL    R  EA AL  +      +P++ TY+ L+NGLC+   
Sbjct: 466 VSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524

Query: 228 TIVALNLF-EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             +ALNL+ + +  G        KP+   +N II GLC  G V+ A +L+ +MK  N  P
Sbjct: 525 LDMALNLWCQALEKG-------FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVP 577

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++VT+ +++ GF    D+  A +++  ++  G+QPD++++++ +  LC   ++  A   L
Sbjct: 578 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFL 637

Query: 347 ELMIWRGVNPNTYTYNTLIDGY 368
              + RGV P   T+N L+ GY
Sbjct: 638 NDAVDRGVLPTAITWNILVQGY 659



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 6/311 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ +L   L KN + +  LS+ +   +     D + +S +IN  C+ GR+     VL ++
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +    PN     ++I G    S++ +A   F       C P V TYNTLINGL +    
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 490

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  L +EM           KPN +TY+ +++GLC+   +D A  L+ +  ++   PDV
Sbjct: 491 SEAYALVKEMLQKG------WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             +  +I G C +    +A +L+ EM  +   P++VT + +M+   K    ++AS++ + 
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDH 604

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G+ P+  +YN  + G C   +I  A          G +   +++N L+  Y   K 
Sbjct: 605 ILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKG 664

Query: 409 VEEALSLYSEM 419
             E + + + M
Sbjct: 665 YMEPVFVPASM 675



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 91/180 (50%), Gaps = 8/180 (4%)

Query: 334 CKNGKMDKA----SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
            KN   D+A     R+ E+    G  P   +YN+L++    ++K D A   F+  E+ G 
Sbjct: 64  AKNSMPDQALDIFQRMHEIF---GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 120

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             ++ +YN LI   C+ K  ++A  L + M  +G  P V +Y TL   L +   +  ALK
Sbjct: 121 SPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALK 180

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYELNIVSYNCLIDGL 508
           LFDEM    V  D   YN  IDG  K G +L A E++ R ++      NI SYN +I+GL
Sbjct: 181 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 240



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 8/184 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +   ML+    P  ++ +++L   L + K  D  L+L+ +    G  PD+  H+I
Sbjct: 491 SEAYALVKEMLQKGWKPNMIT-YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 549

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+  C  G+V     +   + +    PN VT  +L++G         A+ ++     + 
Sbjct: 550 IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 609

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG-LCKE 266
            +PD+ +YN  + GLC       A+    +  +     GV+  P  +T+N ++ G L  +
Sbjct: 610 LQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR----GVL--PTAITWNILVQGYLALK 663

Query: 267 GFVD 270
           G+++
Sbjct: 664 GYME 667


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 195/385 (50%), Gaps = 16/385 (4%)

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           T+ + +  +   G  P +  ++ILIN FCK G +    ++   I +    P  V+F +LI
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265

Query: 185 KGLCAESRIMEAAAL---FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            GLC    + E   L     ++R++   PDVFTY+ LI+GLC+ G   VA  LF+EM   
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIY---PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   +PN +T+  +IDG  +   +D A   + +M    + PD+V Y +++ G C  
Sbjct: 323 G------LRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
            D N+A++L  EM   G++PD +T++ ++D  CK G ++ A  + + M   GV  +   +
Sbjct: 377 GDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             LI G+C   ++  A +    M   G   D  +Y  +I+ YCK  +V+    L  EM  
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G KP V+TYN L  GL +  Q++ A  L + M    V  D  TYN  ++G CK+G   +
Sbjct: 497 NGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED 556

Query: 482 ALELFRA---IRDSKYELNIVS-YN 502
            L+L      I D  Y  ++VS YN
Sbjct: 557 LLKLRNEKGLIVDYAYYTSLVSEYN 581



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 179/340 (52%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           IL   F P    +  LI   C E  I +A  +F + R     P   ++NTLINGLC++ +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L + M            P+  TY+ +I GLCKEG +D A++LF +M+   + P+
Sbjct: 274 LDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            +T+T++I G   +   + A   + +M+  GV+PD+V ++ +++ LCK G ++KA +L++
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   G+ P+  TY TLIDGYC    ++ A ++   M   G + D V++  LI+ +C++ 
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V +A     EM+  G+KP   TY  +  G  +   V+   KL  EM+ N       TYN
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++GLCK G +  A  L  A+ +     + ++YN L++G
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 159/303 (52%), Gaps = 6/303 (1%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           +   P V  YN LIN  C+ G    A  +F E+           +P TV++NT+I+GLCK
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFNTLINGLCK 270

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+   L   M++  I PDV TY+ +I G C     + A++LF EM  +G++P+ +T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D   ++ +MD A      M+  GV P+   YNTL++G C    ++ ARKL   M+
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   D ++Y TLI+ YCK  D+E A+ +   M  +G+    V +  L  G     +V 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A +   EM    +  D  TY   IDG CK G V    +L + ++ + ++  +++YN L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 506 DGL 508
           +GL
Sbjct: 511 NGL 513



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 10/208 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A  + D M +M    P   ++  L     K    ++ + + K +N  G+  D    + 
Sbjct: 380 NKARKLVDEM-KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FC+ GRV      L  ++ +   P+  T+T +I G C +  +     L  + ++  
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P V TYN L+NGLC+ G    A  L E M N     GV   P+ +TYN +++G CK G
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN----LGVT--PDDITYNILLEGHCKNG 552

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVI 295
              KA++L     ++ +  D   YTS++
Sbjct: 553 ---KAEDLLKLRNEKGLIVDYAYYTSLV 577


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 41/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+  L   LAKN +    L LF  +   G+ PD+  ++ILI+ F K G + +   +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 165 LGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
             R+L+     PN  ++  +I GLC   +  E+  ++ + +      D++TY+TLI+GLC
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK--- 280
            +G+   A  +++EMA    E GV   P+ V YNT+++G  + G +++  EL+  M+   
Sbjct: 302 GSGNLDGATRVYKEMA----ENGV--SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355

Query: 281 --------------------DENIN-----------PDVVTYTSVIRGFCYANDWNEAKR 309
                               DE I+            D +TY  ++ G C     N+A  
Sbjct: 356 CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALS 415

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  E  +     D   +S +++ LC+ G++D+ + +L+ M   G  PN +  N +I+G+ 
Sbjct: 416 ILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFV 475

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K++ A + F +M S GC   VV+YNTLIN   K +   EA +L  EML KG KP ++
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY+ L  GL +  +++ AL L+ +        D   +N  I GLC SG V +AL+L+  +
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +  K   N+V++N L++G 
Sbjct: 596 KQRKCVPNLVTHNTLMEGF 614



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 206/397 (51%), Gaps = 7/397 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ L   L  + + D    ++K +   G+ PD+  ++ ++N + + GR+    + L ++
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEE-CLELWKV 350

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +        V++  LI+GL   +++ EA +++       C  D  TY  L++GLC+ G+ 
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL++ EE  NG G+       +T  Y+++I+GLC+EG +D+   +  +M      P+ 
Sbjct: 411 NKALSILEEAENGRGDL------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
               +VI GF  A+   +A R F  M+ +G  P VVT++ +++ L K  +  +A  L++ 
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +G  PN  TY+ L++G C   K+D A  L+      G   DV  +N +I+  C +  
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           VE+AL LYSEM  +   P +VT+NTL  G +++   ERA K++D + +     D  +YN 
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNI 644

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + GLC    + +A+       D       +++N L+
Sbjct: 645 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 213/456 (46%), Gaps = 39/456 (8%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P++AL IF  M  +    P + S+N L   L ++  +D   S F    + GL P++ T++
Sbjct: 94  PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 153

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILI   C+  +      +L  +    F+P+  ++ +LI  L     + +A  LF +    
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDV  YN LI+G  + G  + A  ++E +  G   +     PN  +YN +I+GLCK 
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-----PNIPSYNVMINGLCKC 268

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G  D++ E++ +MK      D+ TY+++I G C + + + A R++ EM + GV PDVV +
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328

Query: 327 SVIMD--------------------ELCK--------------NGKMDKASRLLELMIWR 352
           + +++                    E C+              N K+D+A  + EL+  +
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
               ++ TY  L+ G C    ++ A  +    E+     D  +Y+++IN  C+   ++E 
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +  +M   G KP     N +  G     ++E AL+ F  M          TYN  I+G
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+    EA  L + +    ++ N+++Y+ L++GL
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 22/351 (6%)

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           SH   V   IL+  F P  V   S         RI+E      + +   C  DV    T+
Sbjct: 40  SHTPYVFHHILKRLFDPKLVAHVS---------RIVE----LIRTQKCKCPEDVAL--TV 84

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I    +      AL++F+ M    G     C+P   +YN++++ L +    D+A+  FL 
Sbjct: 85  IKAYAKNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFFLY 139

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            +   ++P++ TY  +I+  C    +++AK L   M +QG  PDV ++  +++ L KNG 
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DVVSYN 397
           M  A +L + M  RGV P+   YN LIDG+     I +A +++  +     ++ ++ SYN
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            +IN  CK    +E+  ++  M        + TY+TL  GL     ++ A +++ EM  N
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            V+ D   YN  ++G  ++G + E LEL++ +        +VSYN LI GL
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGL 369



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 7/252 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E   + D M +    P P     ++ G +  +K  D  L  F  + S G FP + T++ 
Sbjct: 446 DEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDA-LRFFGNMVSKGCFPTVVTYNT 504

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN   K  R S  + ++  +L   + PN +T++ L+ GLC   ++  A  L+ +     
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDV  +N +I+GLC +G    AL L+ EM          C PN VT+NT+++G  K  
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK------CVPNLVTHNTLMEGFYKVR 618

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             ++A +++  +      PD+++Y   ++G C  +  ++A     + +D+GV P  +T++
Sbjct: 619 DFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWN 678

Query: 328 VIMDELCKNGKM 339
           +++  +  NG +
Sbjct: 679 ILVRAVLDNGAL 690


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 182/338 (53%), Gaps = 8/338 (2%)

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +  A   P   T++ LI+  CK  R S  + +L  ++ S   P+  T+T+LI G C   +
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
             +A  +F +       PDV TY+ LI+GLC+ G    A++LF  M          C PN
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS-----CMPN 159

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
           TVTYN++I G C+ G +D+A  L  +M +   +PDVVTYT+++ GFC     ++A  L  
Sbjct: 160 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 219

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           +M  +G+ P+VVTF+ +MD LC+  ++  A  +L  M  +  +P  YTYNT++DGYC  +
Sbjct: 220 QMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVN 279

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +++ ARK    +E   C  +VVS+N +I   CK     EA+ L  E   +   P VV Y 
Sbjct: 280 QLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYT 337

Query: 433 TLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNF 469
           T+   L    +V+ A +++ +M        ++ TY+ F
Sbjct: 338 TVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 177/333 (53%), Gaps = 12/333 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L K +       L + +  +G  PDI+T++ LI  FCK  +      V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLC 223
             +++   F P+ VT++ LI GLC E R+ EA  LF +  +  +C P+  TYN+LI+G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G    A+NL E MA           P+ VTY T+++G CK   +D A +L  +M  + 
Sbjct: 172 RMGKMDEAMNLLERMAETGS------SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+VVT+TS++ G C  N  ++A  +  EM  +   P V T++ I+D  C+  ++++A 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 344 R-LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           + +LE M      PN  ++N +I G C  ++   A +L        C  DVV Y T+I+ 
Sbjct: 286 KFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 403 YCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTL 434
            C+ K V+EA  +Y +ML + G  P  +TY+T 
Sbjct: 343 LCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 152/259 (58%), Gaps = 3/259 (1%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P  VTYN++I GLCK     +A +L  +M      PD+ TYT++I GFC +   ++A R+
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYC 369
           F +++ +G +PDVVT+S ++D LCK G++ +A  L   MI  G   PNT TYN+LI G+C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K+D A  L   M   G   DVV+Y TL+N +CK   +++A  L ++M  KG+ P VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           T+ +L  GL   +++  A+ +  EMRR   +   YTYN  +DG C+   + EA +    +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 490 RDSKYELNIVSYNCLIDGL 508
            +     N+VS+N +I GL
Sbjct: 290 EEMDCPPNVVSFNIMIRGL 308



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%), Gaps = 12/301 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  L     K+K  D  L +F++L + G  PD+ T+S LI+  CK GR+     +
Sbjct: 87  PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL 146

Query: 165 LGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            GR+++S  C  PN VT+ SLI G C   ++ EA  L  +       PDV TY TL+NG 
Sbjct: 147 FGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      A +L  +M            PN VT+ +++DGLC+E  +  A  +  +M+ +
Sbjct: 206 CKLARLDDAYDLLNQMTRKG------LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRK 259

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           + +P V TY +++ G+C  N   EA++  +E MD    P+VV+F++++  LCK  +  +A
Sbjct: 260 SCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEA 317

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLIN 401
             L+E    R  NP+   Y T+ID  C   K+D A +++  M E  GC+ + ++Y+T   
Sbjct: 318 MELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDY 377

Query: 402 W 402
           W
Sbjct: 378 W 378



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 11/242 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+ +F  M++     P   ++N L     +    D  ++L +R+   G  PD+ T++ 
Sbjct: 141 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 200

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N FCK+ R+   + +L ++ R   TPN VTFTSL+ GLC E+R+ +A  +  + R  +
Sbjct: 201 LMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 260

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
           C P V+TYNT+++G CR      A   + EEM          C PN V++N +I GLCK 
Sbjct: 261 CSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD---------CPPNVVSFNIMIRGLCKV 311

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
               +A EL  + +    NPDVV YT+VI   C     +EA R++ +M+++ G  P+ +T
Sbjct: 312 NRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSIT 371

Query: 326 FS 327
           +S
Sbjct: 372 YS 373



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 128/230 (55%), Gaps = 1/230 (0%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           ++D    P  VTY S+I G C A   +EA  L  EM+  G  PD+ T++ ++   CK+ K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYN 397
            D A R+ E ++ RG  P+  TY+ LIDG C   ++  A  LF  M +S  CM + V+YN
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           +LI+ +C+   ++EA++L   M   G  P VVTY TL  G  ++ +++ A  L ++M R 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  +  T+ + +DGLC+   + +A+ +   +R       + +YN ++DG
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 274



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 150/279 (53%), Gaps = 11/279 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
           ++AL +F+ ++      P V +++ L   L K       + LF R+  S    P+  T++
Sbjct: 106 DDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+ FC+MG++     +L R+  +  +P+ VT+T+L+ G C  +R+ +A  L  +    
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+V T+ +L++GLCR      A+++  EM   +      C P   TYNTI+DG C+ 
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKS------CSPTVYTYNTILDGYCRV 278

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +++A++  L+  D    P+VV++  +IRG C  N  +EA  L  E   +   PDVV +
Sbjct: 279 NQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 336

Query: 327 SVIMDELCKNGKMDKASRLLELMIWR-GVNPNTYTYNTL 364
           + ++D LC+  K+D+A R+   M+   G  PN+ TY+T 
Sbjct: 337 TTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 196/390 (50%), Gaps = 47/390 (12%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D+Y+  I+I   C+ G +   F +L  +    F+PN V +T+LI G C +  I +A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 201 --------------------------------------TKHRVFACEPDVFTYNTLINGL 222
                                                  +H VF   P++ TYN ++N L
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF---PNLHTYNCVMNQL 278

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G T  A  +F+EM     E GV C  N VTYNT+I GLC+E   ++A E+  +MK +
Sbjct: 279 CKDGRTKDAFKVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANEVMDQMKSD 332

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            INP+++TY ++I GFC      +A  L  ++  +G+ P +VT+++++   CK G    A
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            ++++ M  RG+ P+  TY  LID +  +D ++ A +L  SME  G   DV +Y+ LI+ 
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHG 452

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +C    + EA  L+  M+ K  +P  V YNT+ LG  +     RAL+LF EM    +  +
Sbjct: 453 FCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             +Y   I+ LCK     EA  L   + DS
Sbjct: 513 VASYRYMIEVLCKERKSKEAEGLVEKMIDS 542



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 181/329 (55%), Gaps = 6/329 (1%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           +F  +IKG C    I ++  L  + R F   P+V  Y TLI+G C+ G    A +LF EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
               G+FG+V   N  TY  +I GL K G   +  E++ KM++  + P++ TY  V+   
Sbjct: 225 ----GKFGLVA--NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQL 278

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C      +A ++F EM ++GV  ++VT++ ++  LC+  K ++A+ +++ M   G+NPN 
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNL 338

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTLIDG+C   K+  A  L   ++S G    +V+YN L++ +CK  D   A  +  E
Sbjct: 339 ITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M  +GIKP+ VTY  L         +E+A++L   M    +  D +TY+  I G C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + EA  LF+++ + K+E N V YN ++ G
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLG 487



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 6/319 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ +L   L KN        +++++   G+FP+++T++ ++N  CK GR    F V   +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                + N VT+ +LI GLC E +  EA  +  + +     P++ TYNTLI+G C     
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKL 354

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL+L  ++ +          P+ VTYN ++ G CK+G    A ++  +M++  I P  
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTYT +I  F  +++  +A +L   M + G+ PDV T+SV++   C  G+M++ASRL + 
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+ +   PN   YNT++ GYC       A +LF  ME      +V SY  +I   CK + 
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 409 VEEALSLYSEMLSKGIKPT 427
            +EA  L  +M+  GI P+
Sbjct: 529 SKEAEGLVEKMIDSGIGPS 547



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 185/364 (50%), Gaps = 10/364 (2%)

Query: 94  FDYMLRMHP---SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           FD ++ +     SP  V    ++ GC  K +  +    LF  +   GL  + +T+++LI+
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKFGLVANEWTYTVLIH 241

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
              K G    GF +  ++      PN  T+  ++  LC + R  +A  +F + R      
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           ++ TYNTLI GLCR      A  + ++M +          PN +TYNT+IDG C    + 
Sbjct: 302 NIVTYNTLIGGLCREMKANEANEVMDQMKSDG------INPNLITYNTLIDGFCGVRKLG 355

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           KA  L   +K   ++P +VTY  ++ GFC   D + A ++  EM ++G++P  VT+++++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D   ++  M+KA +L   M   G+ P+ +TY+ LI G+C+  +++ A +LF SM      
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            + V YNT++  YCK      AL L+ EM  K + P V +Y  +   L +  + + A  L
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGL 535

Query: 451 FDEM 454
            ++M
Sbjct: 536 VEKM 539



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 6/291 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           ++ H   P + ++N +   L K+        +F  +   G+  +I T++ LI   C+  +
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
            +    V+ ++      PN +T+ +LI G C   ++ +A +L    +     P + TYN 
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++G C+ G T  A  + +EM     E G+  KP+ VTY  +ID   +   ++KA +L  
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEME----ERGI--KPSKVTYTILIDTFARSDNMEKAIQLRS 432

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M++  + PDV TY+ +I GFC     NEA RLF  M+++  +P+ V ++ ++   CK G
Sbjct: 433 SMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEG 492

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
              +A RL   M  + + PN  +Y  +I+  C   K   A  L   M  +G
Sbjct: 493 SSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSG 543



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 34/284 (11%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G  +  F   +  L    + E        Y  +I  +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 319 VQP----------------------------------DVVTFSVIMDELCKNGKMDKASR 344
             P                                  DV +F +++   C+ G+++K+  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +   G +PN   Y TLIDG C   +I+ A+ LF  M   G + +  +Y  LI+   
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN   ++   +Y +M   G+ P + TYN +   L +  + + A K+FDEMR   V+ +  
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I GLC+     EA E+   ++      N+++YN LIDG 
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 211/401 (52%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++NIL   L + +     L+L++++N  G+ P I T+  L+ C+C  G +     +
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +    FTPN VT+T+L+KG   ++   +A AL  + +      + +TYNTLINGLC 
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G       + +         G V  P  +TYN+II+G  K G +  A  ++ +M  + I
Sbjct: 504 VGRVCEVGEMLKRFETE----GFV--PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTYTS I G+C  +  + A ++  ++  +G++PD+  ++ ++   C+ G M  A +
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L LM+  G+ PN   YN+ I GY     ++ A +L+  M   G   D  +Y TLI+ + 
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFS 677

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ +V  AL LYSEM++KG  P  +T+  L  GL     ++ A KL DEM R  +  +  
Sbjct: 678 KDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL 737

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            YN  I+G  ++G + EA  L   + + K   +  +Y+ L+
Sbjct: 738 MYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 207/410 (50%), Gaps = 7/410 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R H   P  + FN++   L  +K +   +SLFK +  +G+ PD +T++ILI+  C+  +
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRK 401

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +  ++  +   P  VT+ SL+   C    + EA  L+T+       P+V TY T
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L+ G         A  L  EM       GV C  N  TYNT+I+GLC  G V +  E+  
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQN----GVSC--NDYTYNTLINGLCVVGRVCEVGEMLK 515

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           + + E   P  +TY S+I GF  A     A  ++ +M  +G+ P++VT++  +D  CK  
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             D A ++L  +  +G+ P+   YN+LI G+C    + HA ++ V M  +G + ++  YN
Sbjct: 576 CCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYN 635

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           + I  Y   K +EEAL LY +M+ +GI     TY TL  G  +   V  ALKL+ EM   
Sbjct: 636 SFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               D  T+     GLC++G + +A +L   +       N++ YN LI+G
Sbjct: 696 GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLING 745



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN +   L K    +  L +   L + G    +   + L++ +C    V     +    
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           LR    P  VT+T LI+G   E    +A  L  + R     P    +N +I GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A++LF+EMA+     G+   P+  TYN +I  LC+   + +A  L+ KM +  + P +
Sbjct: 369 KDAVSLFKEMADS----GI---PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY S++  +C     +EA +L+ EM  +G  P+VVT++ +M         DKA  LL  
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   GV+ N YTYNTLI+G C+  ++    ++    E+ G +   ++YN++IN + K   
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  A ++Y +M +KGI P +VTY +   G  +    + ALK+ +++R   +  D   YN+
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+ G +  AL++   +       NI  YN  I G
Sbjct: 602 LIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 193/410 (47%), Gaps = 7/410 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R    P     F+++     K   YD  + LF  + ++ + PD    S+ I   CK+  
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
            +   +VL ++  + F P   TF S++  L    R+ EA  +  +      +  V    T
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++G C       AL++FEE        G+V  P  VTY  +I G  +EG  +KA EL  
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M+D  + P    +  VI+G      W +A  LF EM D G+ PD  T+++++  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+ +A  L E M   GV P   TY++L+  YC+   +D A KL+  M   G   +VV+Y 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TL+  +      ++A +L +EM   G+     TYNTL  GL  + +V    ++       
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                  TYN+ I+G  K+G +  A  +++ +       NIV+Y   IDG
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 176/402 (43%), Gaps = 73/402 (18%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           TP+A + T L+      +   +A AL  + R      D + ++ ++    + G    A+ 
Sbjct: 139 TPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDAVR 198

Query: 234 LFEEMANGNGE---------FGVVCK--------------------PNTVTYNTIIDGLC 264
           LF+EM     E            +CK                    P   T+N+++D L 
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258

Query: 265 KEGFVDKAKELFLKMKDENINP----DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           K G +++A    L +KDE +       VV  T+++ G+C   +  +A  +F E +  G+ 
Sbjct: 259 KGGRMEEA----LHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLV 314

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELM-----------------------IWR----- 352
           P  VT++V++    + G  +KA  L   M                       +W+     
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 353 -------GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
                  G+ P+ +TYN LI   C   KI  A  L+  M   G    +V+Y++L+  YC 
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           N  ++EA+ LY+EM  KG  P VVTY TL  G       ++A  L  EM++N V+ + YT
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I+GLC  G V E  E+ +      +    ++YN +I+G
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 17/338 (5%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +A  F  +++    E    +A  LF +      EPD    +  I  LC+      AL + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----DVVTY 291
            +M +     G V  P   T+N+++D L K G +++A    L +KDE +       VV  
Sbjct: 236 RKMQDA----GFV--PWDFTFNSVVDVLVKGGRMEEA----LHIKDELLATGKKMSVVLA 285

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T+++ G+C   +  +A  +F E +  G+ P  VT++V++    + G  +KA  L   M  
Sbjct: 286 TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345

Query: 352 RGVNPNTYTYNTLIDGYCLTDKI-DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            G+ P+T  +N +I G  L DK+   A  LF  M  +G + D  +YN LI+W C+ + + 
Sbjct: 346 HGLLPSTNEFNMVIKGL-LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIR 403

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EAL+L+ +M   G+KP +VTY++L L       ++ A+KL+ EM       +  TY   +
Sbjct: 404 EALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G        +A  L   ++ +    N  +YN LI+GL
Sbjct: 464 KGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL 501



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 1/231 (0%)

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M+ +    D   +  V+R       +++A RLF EM    ++PD    SV +  LCK  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             ++A  +L  M   G  P  +T+N+++D      +++ A  +   + + G    VV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TL++ YC  ++V +AL ++ E L  G+ PT VTY  L  G  E    E+A +L  +MR +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   T  +N  I GL       +A+ LF+ + DS    +  +YN LI  L
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWL 396



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 102/230 (44%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M+   + PD  + T ++     +    +A  L  EM  +G   D   F V+M    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            D A RL + M    + P+    +  I   C     + A  +   M+  G +    ++N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++   K   +EEAL +  E+L+ G K +VV   TL  G     +V +AL +F+E  R+ 
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +     TY   I G  + G   +A EL R +RD     +   +N +I GL
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 59/126 (46%)

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           SME+ G   D  S   L+    ++    +AL+L +EM  KG       ++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
             + A++LFDEM  + +  D    +  I  LCK      AL + R ++D+ +     ++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 503 CLIDGL 508
            ++D L
Sbjct: 252 SVVDVL 257


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 208/424 (49%), Gaps = 11/424 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           + ++AL    +M+  H    P+S +FN L   L ++ ++D    +F  L S  +  D Y+
Sbjct: 104 STDQALTFLHHMI--HEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVL-DAYS 160

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
             I+I   C+ G    GF +L  +     +PN V +T+LI G C +  +M A  LF K  
Sbjct: 161 FGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMN 220

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                P+  TY+ L+NG  + G       ++E M       G+V  PN   YN +I   C
Sbjct: 221 RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS----GIV--PNAYAYNCLISEYC 274

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G VDKA ++F +M+++ I   V+TY  +I G C    + EA +L  ++   G+ P++V
Sbjct: 275 NDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIV 334

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++++++  C   KMD A RL   +   G++P   TYNTLI GY   + +  A  L   M
Sbjct: 335 TYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E        V+Y  LI+ + +    E+A  ++S M   G+ P V TY+ L  GL     +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNM 454

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A KLF  +   H+  ++  YN  I G CK G    AL L   +  S    N+ S+ C 
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASF-CS 513

Query: 505 IDGL 508
             GL
Sbjct: 514 TIGL 517



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 193/420 (45%), Gaps = 49/420 (11%)

Query: 128 SLFKRLNSAGLFP-DIYT--HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           SL  +L  A   P   YT  +  ++N +            L  ++     P + TF +L+
Sbjct: 72  SLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLL 131

Query: 185 KGLCAESRIMEAAALFT--KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
             L   +   +A  +F   K +V     D +++  +I G C  G+ +    L   +    
Sbjct: 132 CLLIRSNYFDKAWWIFNELKSKVVL---DAYSFGIMIKGCCEAGYFVKGFRLLAMLE--- 185

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
            EFG+   PN V Y T+IDG CK+G V  AK LF KM    + P+  TY+ ++ GF    
Sbjct: 186 -EFGL--SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQG 242

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              E  +++  M   G+ P+   ++ ++ E C +G +DKA ++   M  +G+     TYN
Sbjct: 243 LQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYN 302

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G C   K   A KL   +   G   ++V+YN LIN +C  + ++ A+ L++++ S 
Sbjct: 303 ILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSS 362

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--------------------RRNH---- 458
           G+ PT+VTYNTL  G  ++  +  AL L  EM                    R NH    
Sbjct: 363 GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKA 422

Query: 459 -----------VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                      +  D YTY+  + GLC  G + EA +LF+++ +   + N V YN +I G
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 7/339 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M R+   P P  ++++L     K         +++ +  +G+ P+ Y ++ LI+ +
Sbjct: 215 LFCKMNRLGLVPNP-HTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G V   F V   +         +T+  LI GLC   +  EA  L  K       P++
Sbjct: 274 CNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LING C       A+ LF ++ +          P  VTYNT+I G  K   +  A
Sbjct: 334 VTYNILINGFCDVRKMDSAVRLFNQLKSSG------LSPTLVTYNTLIAGYSKVENLAGA 387

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L  +M++  I P  VTYT +I  F   N   +A  +   M   G+ PDV T+SV++  
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHG 447

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC +G M +AS+L + +    + PN+  YNT+I GYC       A +L   M  +G + +
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           V S+ + I   C+++  +EA  L  +M++ G+KP+V  Y
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 41/258 (15%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++NIL G L + K +   + L  ++N  GL P+I T++ILIN FC + ++     +  
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFN 357

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK------------------------ 202
           ++  S  +P  VT+ +LI G      +  A  L  +                        
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 203 HRVFACE-----------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           H   ACE           PDV+TY+ L++GLC  G+   A  LF+ +    GE  +  +P
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSL----GEMHL--QP 471

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N+V YNT+I G CKEG   +A  L  +M    + P+V ++ S I   C    W EA+ L 
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531

Query: 312 IEMMDQGVQPDVVTFSVI 329
            +M++ G++P V  + ++
Sbjct: 532 GQMINSGLKPSVSLYKMV 549



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 7/157 (4%)

Query: 66  LKKFLKERCKSSGQGDINLITP-------NEALCIFDYMLRMHPSPPPVSSFNILFGCLA 118
           L K ++ERC +  +    ++          E  C    ++      P V ++++L   L 
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
            + +      LFK L    L P+   ++ +I+ +CK G       +L  +++S   PN  
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVA 509

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           +F S I  LC + +  EA  L  +      +P V  Y
Sbjct: 510 SFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 217/462 (46%), Gaps = 63/462 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-V 163
           P   +FN+L   L ++   D    LF +++  G  P+ +T  IL+  FC+ GR       
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V G++  +    N V + +L+   C +    EA  L  +       PDV T+N+ I+ LC
Sbjct: 209 VDGKMGGNV---NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALC 265

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G    A  +F +M   +GE G+  KPN VT+N ++ G C+EG +++A+ L   MK   
Sbjct: 266 RAGKVFEASRIFRDMQM-DGELGLP-KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGG 323

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
               + +Y + + G        E + +  EM++ G++P++ +++++MD LC+N  M  A 
Sbjct: 324 NFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDAR 383

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC-------------- 389
           RL++LM+  GV P+T TY TL+ GYC   K+  A+ +   M   GC              
Sbjct: 384 RLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSL 443

Query: 390 ---------------------MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK--- 425
                                  D V+ N ++N  C+N ++E+A  + SEM + G     
Sbjct: 444 WKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLG 503

Query: 426 -------------------PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
                              P V+TY TL  GL ++ ++E A K F EM   ++  D+ TY
Sbjct: 504 KENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTY 563

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + F+   CK G +  AL + + +  +     + +YN LI GL
Sbjct: 564 DTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGL 605



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 176/345 (51%), Gaps = 12/345 (3%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++++   P   TF  LI+ LC  + +  A  LF K     C+P+ FT   L+ G CR G 
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
           T  AL   +    GN         N V YNT++   CK+   D+A++L  +M ++ + PD
Sbjct: 202 TKQALEFVDGKMGGN--------VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPD 253

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV----QPDVVTFSVIMDELCKNGKMDKAS 343
           VVT+ S I   C A    EA R+F +M   G     +P+VVTF++++   C+ G M++A 
Sbjct: 254 VVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEAR 313

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+E M   G   +  +YNT + G     K+   R +   M  NG   ++ SYN +++  
Sbjct: 314 SLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+N  + +A  L   M+S G+ P  VTY TL  G     +V  A  + +EM R     +T
Sbjct: 374 CRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNT 433

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YT N  ++ L K G   EA E+ + + +  Y+L+ V+ N +++GL
Sbjct: 434 YTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGL 478



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 211/459 (45%), Gaps = 63/459 (13%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + S+N     L +N       S+   +   G+ P+IY+++I+++  C+   +     ++ 
Sbjct: 328 LESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMD 387

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++ +   P+ VT+T+L+ G C++ ++ EA A+  +     C P+ +T NTL+N L + G
Sbjct: 388 LMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEG 447

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN- 285
               A  + ++M   + +       +TVT N +++GLC+ G ++KA E+  +M  +  N 
Sbjct: 448 RKSEAEEMLQKMNEKSYQL------DTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNS 501

Query: 286 ---------------------PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
                                PDV+TYT++I G C      EAK+ FIEMM + + PD V
Sbjct: 502 LGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSV 561

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T+   +   CK GK+  A R+L+ M   G +    TYN+LI G     +I     L   M
Sbjct: 562 TYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 621

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI-KPTVVT------------- 430
              G   D+ +YN +IN  C+    ++A SL  EML KG+  P V +             
Sbjct: 622 RERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGD 681

Query: 431 ---------------------YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
                                Y+ +F  L    ++  A +LF+      + +  + Y + 
Sbjct: 682 FKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDL 741

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ID LCK G + +A  L + + D  Y  +  S+  +IDGL
Sbjct: 742 IDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGL 780



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 153/384 (39%), Gaps = 64/384 (16%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  I + M+R     P   + N L   L K         + +++N      D  T +I+
Sbjct: 416 EAKAILNEMIR-KGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIV 474

Query: 149 INCFCKMGRVSHGFVVLGRILR----------------------SCFTPNAVTFTSLIKG 186
           +N  C+ G +     V+  +                        S   P+ +T+T+LI G
Sbjct: 475 VNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLING 534

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC   ++ EA   F +       PD  TY+T +   C+ G    AL + ++M   NG   
Sbjct: 535 LCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMER-NG--- 590

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
             C     TYN++I GL  +G + +   L  +M++  I+PD+ TY ++I   C      +
Sbjct: 591 --CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKD 648

Query: 307 AKRLFIEMMDQGV-QPDVVTFSVIMDELCKNG---------------------------- 337
           A  L  EM+D+GV  P+V +F +++   CK+G                            
Sbjct: 649 ATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFN 708

Query: 338 ------KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
                 K+  A  L E  + R +    + Y  LID  C   ++D A  L   +   G   
Sbjct: 709 ELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCF 768

Query: 392 DVVSYNTLINWYCKNKDVEEALSL 415
           D  S+  +I+   K  + ++A  L
Sbjct: 769 DHSSFIPVIDGLSKRGNKQQADEL 792


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 222/434 (51%), Gaps = 30/434 (6%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R +     + S+NI    L ++  +    ++ K++   G+ P IY+++IL++  CK+G 
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +S    ++G + R+   P+AVT+  L+ G C+  ++  A +L  +     C P+ +T N 
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++ L + G    A  L  +M N  G +G+    +TVT N I+DGLC  G +DKA E+  
Sbjct: 437 LLHSLWKMGRISEAEELLRKM-NEKG-YGL----DTVTCNIIVDGLCGSGELDKAIEIVK 490

Query: 278 KMK-----------------------DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            M+                       + N  PD++TY++++ G C A  + EAK LF EM
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           M + +QPD V +++ +   CK GK+  A R+L+ M  +G + +  TYN+LI G  + ++I
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
                L   M+  G   ++ +YNT I + C+ + VE+A +L  EM+ K I P V ++  L
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                ++   + A ++F E   +        Y+   + L  +G +L+A EL  A+ D  +
Sbjct: 671 IEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGF 729

Query: 495 ELNIVSYNCLIDGL 508
           EL    Y  L++ L
Sbjct: 730 ELGTFLYKDLVESL 743



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 205/424 (48%), Gaps = 25/424 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN+L   L  +   D    LF  +   G  P+ +T  IL+  +CK G    G  +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN V + +++   C E R  ++  +  K R     PD+ T+N+ I+ LC+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  +F +M     E+  + +PN++TYN ++ G CK G ++ AK LF  +++ + 
Sbjct: 265 EGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              + +Y   ++G      + EA+ +  +M D+G+ P + +++++MD LCK G +  A  
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++ LM   GV P+  TY  L+ GYC   K+D A+ L   M  N C+ +  + N L++   
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA--- 461
           K   + EA  L  +M  KG     VT N +  GL    ++++A+++   MR +  AA   
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 462 --------------------DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
                               D  TY+  ++GLCK+G   EA  LF  +   K + + V+Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562

Query: 502 NCLI 505
           N  I
Sbjct: 563 NIFI 566



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 191/403 (47%), Gaps = 49/403 (12%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCF---TPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           +++ F K   +   F    +++RS F    P+   +  L++    E R+   + L+    
Sbjct: 81  VVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
           +    P  +T+N LI  LC +     A  LF+EM          CKPN  T+  ++ G C
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGILVRGYC 193

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G  DK  EL   M+   + P+ V Y +++  FC     ++++++  +M ++G+ PD+V
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253

Query: 325 TFSVIMDELCKNGKMDKASRL---LELMIWRGV-NPNTYTYNTLIDGYCLTDKIDHARKL 380
           TF+  +  LCK GK+  ASR+   +EL  + G+  PN+ TYN ++ G+C    ++ A+ L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F S+  N  +  + SYN  +    ++    EA ++  +M  KGI P++ +YN L  GL +
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373

Query: 441 -----------------------------------IHQVERALKLFDEMRRNHVAADTYT 465
                                              + +V+ A  L  EM RN+   + YT
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            N  +  L K G + EA EL R + +  Y L+ V+ N ++DGL
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 7/263 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +++ L   L K   +    +LF  +    L PD   ++I I+ FCK G++S  F V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +     +  T+ SLI GL  +++I E   L  + +     P++ TYNT I  LC 
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A NL +EM   N        PN  ++  +I+  CK    D A+E+F +      
Sbjct: 642 GEKVEDATNLLDEMMQKN------IAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSIC 694

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                 Y+ +      A    +A  L   ++D+G +     +  +++ LCK  +++ AS 
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754

Query: 345 LLELMIWRGVNPNTYTYNTLIDG 367
           +L  MI RG   +      +IDG
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDG 777


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 203/404 (50%), Gaps = 10/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N +   L K    +    L   + + GLFP+  T +IL++ +CK+G +     V
Sbjct: 81  PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  + R+   P+  T+T+LI GLC + +I EA  L  +       P V TYN LING   
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFE 200

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              ++    L +EM       G   KPN VTYN ++    KEG +D A     KM++   
Sbjct: 201 CSSSLKGFELIDEME------GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 254

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +PD VT+ ++  G+C A   +EA R+  EM  +G++ + VT + I+  LC   K+D A +
Sbjct: 255 SPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 314

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL     RG   +  +Y TLI GY    K       +  M+    +  +++Y T+I   C
Sbjct: 315 LLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLC 370

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           ++   ++++   +E+L  G+ P   TYNT+ LG     QV++A    ++M +     D +
Sbjct: 371 RSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLF 430

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T N  + GLC  G + +AL+LF+        ++ V++N +I GL
Sbjct: 431 TCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 198/412 (48%), Gaps = 43/412 (10%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV---VLGRILRSCFTPNAVTFTSLIKG 186
            KRL+   L P++ T + LI    +       ++   +   +++     N  TF  LI G
Sbjct: 1   MKRLH---LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICG 57

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
            C E+++ EA  L  K + F+C PD  +YNT+++ LC+ G    A +L  +M N NG F 
Sbjct: 58  CCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGLF- 115

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               PN  T+N ++ G CK G++ +A E+   M   N+ PDV TYT++I G C     +E
Sbjct: 116 ----PNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDE 171

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A RL  EM +  + P VVT++++++   +     K   L++ M  +GV PN  TYN ++ 
Sbjct: 172 AFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVK 231

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            Y    K+D+A      ME +G   D V++NTL N YCK   + EA  +  EM  KG+K 
Sbjct: 232 WYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKM 291

Query: 427 TVVTYNTLFLGLFEIHQVERALKL-------------------------------FDEMR 455
             VT NT+   L    +++ A KL                               +DEM+
Sbjct: 292 NSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMK 351

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +     TY   I GLC+SG   ++++    + +S    +  +YN +I G
Sbjct: 352 EKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILG 403



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 179/390 (45%), Gaps = 38/390 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D M R +   P V ++  L G L K+   D    L   + +  L P + T+++L
Sbjct: 136 EAAEVIDIMAR-NNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNML 194

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN   +      GF ++  +      PNAVT+  ++K    E ++  A     K      
Sbjct: 195 INGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 254

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD  T+NTL NG C+ G    A  + +EM+          K N+VT NTI+  LC E  
Sbjct: 255 SPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG------LKMNSVTLNTILHTLCGERK 308

Query: 269 VDKAKEL-------------------------------FLKMKDENINPDVVTYTSVIRG 297
           +D A +L                               + +MK++ I P ++TY ++I G
Sbjct: 309 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGG 368

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C +   +++     E+++ G+ PD  T++ I+   C+ G++DKA      M+ +   P+
Sbjct: 369 LCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPD 428

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
            +T N L+ G C    +D A KLF +  S G   D V++NT+I+  C+    EEA  L +
Sbjct: 429 LFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLA 488

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           EM  K + P   T+N +   L +  +++ A
Sbjct: 489 EMEEKKLGPDCYTHNAILSALADAGRMKEA 518



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 155/303 (51%), Gaps = 9/303 (2%)

Query: 209 EPDVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           +P++ T NTLI  L R        ++  +F ++     + GV  + NT T+N +I G C 
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVI----KLGV--EVNTNTFNILICGCCI 60

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           E  + +A  L  KMK  +  PD V+Y +++   C     NEA+ L ++M + G+ P+  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F++++   CK G + +A+ ++++M    V P+  TY TLI G C   KID A +L   ME
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           +   +  VV+YN LIN   +     +   L  EM  KG+KP  VTYN +     +  +++
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A     +M  +  + D  T+N   +G CK+G + EA  +   +     ++N V+ N ++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 506 DGL 508
             L
Sbjct: 301 HTL 303


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 191/381 (50%), Gaps = 9/381 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           LS F+ +   G+ P +   + ++       R      V   +L+    P+  T+ +L+  
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 187 LCAESRIMEAAALFT--KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
            C   R+ +A AL    + R   C P+  TYN +INGL R G    A  L + M      
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-- 296

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                K +  TYN +I GL    FV+KA  L L+M++E I P VVTY ++I G     + 
Sbjct: 297 -----KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A+  F EM  +G+ PD++T++ +++  CK G + +A  L   +   G+ P   TYN L
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           IDGYC    ++ AR+L   M    C+ DV +Y  L+N  C  +++      + EMLSKG+
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           +P    YNT       I  +  A +L +EM    +++DT TYN  IDGLCK+G + +A  
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531

Query: 485 LFRAIRDSKYELNIVSYNCLI 505
           L+  +      L+ V+Y CLI
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLI 552



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 224/466 (48%), Gaps = 22/466 (4%)

Query: 43  PSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHP 102
           P  PT+   L   LR++ K  A         C++  Q  +      + L  F  M R H 
Sbjct: 141 PLSPTSHQLLNSLLRMSTKFSAE--------CQA--QKSVPASCSTQCLSAFQEMAR-HG 189

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
             P V   N +   L     +D + +++  +   G+ P I+T++ L++ FCK GR+    
Sbjct: 190 VAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAV 249

Query: 163 VVLGRI---LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
            +L  +      C  PN VT+  +I GL  +  + +AA L    R+ + +   FTYN LI
Sbjct: 250 ALLKDMEARAAGCL-PNDVTYNVVINGLARKGELEKAAQLVDIMRL-SKKASAFTYNPLI 307

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
            GL        A  L  EM N     G+V  P  VTYNT+IDGL K G  + A+  F +M
Sbjct: 308 TGLLARDFVEKAGALLLEMENE----GIV--PTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           + + + PD++TY S+I G+C A +  +A  LF ++   G+ P V+T+++++D  C+ G +
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDL 421

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           + A RL E M      P+  TY  L++G C+   +   R  F  M S G   D  +YNT 
Sbjct: 422 EGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTR 481

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+       +  A  L  EM+ +GI    VTYN L  GL +   ++ A  L+ +M  + +
Sbjct: 482 ISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGL 541

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             D  TY   I   C+ G ++EA  +F  +  S    ++V+Y   I
Sbjct: 542 RLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFI 587



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 202/407 (49%), Gaps = 11/407 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS--AGLFPDIYTHSILINCFCKMGRVSHGF 162
           P + ++N L     K    D  ++L K + +  AG  P+  T++++IN   + G +    
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKA- 285

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             L  I+R     +A T+  LI GL A   + +A AL  +       P V TYNTLI+GL
Sbjct: 286 AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345

Query: 223 CRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            +TG+   A   F+EM A G         P+ +TYN++I+G CK G + +A  LF  +K 
Sbjct: 346 FKTGNAEAAQVKFDEMRAKG-------LLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             + P V+TY  +I G+C   D   A+RL  EM ++   PDV T++++M+  C    +  
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAM 458

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                + M+ +G+ P+ + YNT I        I +A +L   M   G   D V+YN LI+
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             CK   +++A  L+ +M++ G++   VTY  L     E  ++  A  +FD M  + ++ 
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              TY  FI   C+ G +  A   FR + +   E N V+YN L+  L
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 167/367 (45%), Gaps = 29/367 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   L K  + +     F  + + GL PD+ T++ LIN +CK G +     +
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G + R+   P  +T+  LI G C    +  A  L  +     C PDV TY  L+NG C 
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCM 452

Query: 225 TGHTIVALNLFEEMANGNGE---------------FGVVCKP--------------NTVT 255
             +  +    F+EM +   E                G +                 +TVT
Sbjct: 453 VRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVT 512

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +IDGLCK G +  A  L++KM  + +  D VTYT +I   C      EAK +F  M+
Sbjct: 513 YNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMV 572

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+ P VVT+++ +   C+ G +  A      M+  GV PN  TYN L+   C   + +
Sbjct: 573 ASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A + F  M   G + +  +Y  LI+  CK  +   A+ LY EM  KGI P   T+N LF
Sbjct: 633 SAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALF 692

Query: 436 LGLFEIH 442
            G  E H
Sbjct: 693 KGFGEGH 699


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 194/416 (46%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M           S+  +   L K    D    +   L  AGL P + T+++L++  
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDAL 266

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GRV   F + GR+ +   TP+ VTF  LI GL    R  E   +  +       P+ 
Sbjct: 267 CKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNE 326

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN LI   CR GH   AL LF+EM           KP  VTYN I   LCKEG +++A
Sbjct: 327 VIYNELIGWHCRKGHCSQALRLFDEMVLKK------MKPTAVTYNLIAKALCKEGEMERA 380

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA-KRLFIEMMDQGVQPDVVTFSVIMD 331
           + +   M    +      + +V+          E+   +  EM+ +G++P+    +  M 
Sbjct: 381 ERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMR 440

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
           ELCK GK  +A  +    + +G+  N  T N LI G C    +  A K+  +M + G   
Sbjct: 441 ELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIEL 500

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D ++YN +I   CK+  +EEA+ L+ +M  +G KP + T+NTL      + ++E    L 
Sbjct: 501 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL 560

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D+M+   +  D  +Y   IDG CK+  + +A E    + D   + N+  YN LI G
Sbjct: 561 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 616



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 202/433 (46%), Gaps = 30/433 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L K+   +    L  R+   G+ P + T  ILIN   +  R     +V
Sbjct: 254 PTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIV 313

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +   +PN V +  LI   C +    +A  LF +  +   +P   TYN +   LC+
Sbjct: 314 LQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 373

Query: 225 TGHTIVALNLFEEMANGN-----GEFGVVC-------------------------KPNTV 254
            G    A  + E+M +       G F  V                          +PN  
Sbjct: 374 EGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDP 433

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
                +  LCK G   +A  ++ K  ++ +  ++ T  ++I G C      EA ++   M
Sbjct: 434 LMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTM 493

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +++G++ D +T+++++   CK+ KM++A +L   M  RG  P+ +T+NTL+  YC   K+
Sbjct: 494 LNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKM 553

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           +    L   M++ G   D+VSY T+I+ +CK KD+ +A    +E++ +G+KP V  YN L
Sbjct: 554 EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNAL 613

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G      +  A+   + M+ N +     TY + +  +C +G V EA  +F   R++  
Sbjct: 614 IGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673

Query: 495 ELNIVSYNCLIDG 507
           +L ++ Y  +I G
Sbjct: 674 DLGVIGYTIMIQG 686



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 194/437 (44%), Gaps = 42/437 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F IL   LA+ + +  V  + + +   G+ P+   ++ LI   C+ G  S    +
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAES------RIME-----------------AAALFT 201
              ++     P AVT+  + K LC E       RI+E                  A L  
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 408

Query: 202 KHRVF-------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
           + R                  P+       +  LC+ G    A+ ++ +  N     GV 
Sbjct: 409 RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG--LGV- 465

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              N  T N +I GLC+  ++ +A ++   M ++ I  D +TY  +IRG C  +   EA 
Sbjct: 466 ---NLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L  +M  +G +PD+ TF+ ++   C  GKM++   LL+ M   G+ P+  +Y T+IDG+
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C    I  A++    +   G   +V  YN LI  Y +N D+  A+     M S GI+PT 
Sbjct: 583 CKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTN 642

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY +L   +     VE A  +F + R N+V      Y   I G CK G ++EA+  F  
Sbjct: 643 VTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEE 702

Query: 489 IRDSKYELNIVSYNCLI 505
           +R      N ++Y  L+
Sbjct: 703 MRSRGISPNKLTYTTLM 719



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 6/354 (1%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L + +  ++V+S+   + + G+ P+    +  +   CK G+      +  + L      N
Sbjct: 407 LQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVN 466

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
             T  +LI GLC    + EA  +         E D  TYN +I G C+      A+ L  
Sbjct: 467 LATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHG 526

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           +M           KP+  T+NT++   C  G +++   L  +MK E + PD+V+Y ++I 
Sbjct: 527 DMTRRG------FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 580

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G C A D  +AK    E+MD+G++P+V  ++ ++    +NG +  A   +E M   G+ P
Sbjct: 581 GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQP 640

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
              TY +L+   C    ++ A+ +F     N     V+ Y  +I  YCK   + EA++ +
Sbjct: 641 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 700

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            EM S+GI P  +TY TL     +    E A KLFDEM  + V  D  TY   I
Sbjct: 701 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 195/419 (46%), Gaps = 8/419 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +FD M+     P  V+ +N++   L K    +    + + + S G+       + 
Sbjct: 343 SQALRLFDEMVLKKMKPTAVT-YNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 401

Query: 148 LINCFCKMGRVSHGFV-VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++    +  R     V +   ++     PN    T+ ++ LC   +  EA  ++ K    
Sbjct: 402 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 461

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               ++ T N LI+GLC   +   A  + + M N   E       +++TYN +I G CK+
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIEL------DSITYNIMIRGCCKD 515

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +++A +L   M      PD+ T+ +++  +C      E   L  +M  +G+QPD+V++
Sbjct: 516 SKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSY 575

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             I+D  CK   + KA   L  ++ RG+ PN + YN LI GY     I  A     +M+S
Sbjct: 576 GTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKS 635

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           NG     V+Y +L+ W C    VEEA +++S+     +   V+ Y  +  G  ++ ++  
Sbjct: 636 NGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVE 695

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           A+  F+EMR   ++ +  TY   +    KSG   EA +LF  +  S    + ++Y  LI
Sbjct: 696 AVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 179/378 (47%), Gaps = 17/378 (4%)

Query: 100 MHPSPPPVSSFNILFGCLAK----NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           M P+ P      ++  C+ +     KH + V   FK LN  GL  ++ T + LI+  C+ 
Sbjct: 428 MRPNDP------LMTACMRELCKGGKHQEAVGIWFKTLNK-GLGVNLATSNALIHGLCEG 480

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
             +     V+  +L      +++T+  +I+G C +S++ EA  L         +PD+FT+
Sbjct: 481 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF 540

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           NTL++  C  G      +L ++M           +P+ V+Y TIIDG CK   + KAKE 
Sbjct: 541 NTLLHAYCNLGKMEETFHLLDQMKTEG------LQPDIVSYGTIIDGHCKAKDIRKAKEY 594

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             ++ D  + P+V  Y ++I G+    D + A      M   G+QP  VT+  +M  +C 
Sbjct: 595 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 654

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G +++A  +        V+     Y  +I GYC   K+  A   F  M S G   + ++
Sbjct: 655 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 714

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y TL+  Y K+ + EEA  L+ EM+  G+ P  +TY TL     E++ +++ +    E+ 
Sbjct: 715 YTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELS 774

Query: 456 RNHVAADTYTYNNFIDGL 473
              +  D   YN   +G+
Sbjct: 775 SGALTKDDRMYNILSNGI 792



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 118/205 (57%), Gaps = 1/205 (0%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKD-ENINPDVVTYTSVIRGFCYANDWNEAKR 309
           P+  T N  ++ L + G +D A+E+F +M++  N+  +  +YT++I+  C A   +    
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +  E+   G+QP VVT++V+MD LCK+G++++A RL   M   G+ P+  T+  LI+G  
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             ++      +   ME  G   + V YN LI W+C+     +AL L+ EM+ K +KPT V
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM 454
           TYN +   L +  ++ERA ++ ++M
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDM 387



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 139/321 (43%), Gaps = 6/321 (1%)

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
           A+  +  AA  F         P + T N  +  L R G    A  +F+EM          
Sbjct: 162 AQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRN----- 216

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
              N  +Y  +I  LCK G VD   E+  ++    + P VVTY  ++   C +    EA 
Sbjct: 217 VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 276

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           RL   M   G+ P VVTF ++++ L +  +  +   +L+ M   GV+PN   YN LI  +
Sbjct: 277 RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 336

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C       A +LF  M         V+YN +    CK  ++E A  +  +MLS G+    
Sbjct: 337 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 396

Query: 429 VTYNTLFLGLFE-IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             +NT+   L +   ++E  + + +EM    +  +       +  LCK G   EA+ ++ 
Sbjct: 397 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 456

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
              +    +N+ + N LI GL
Sbjct: 457 KTLNKGLGVNLATSNALIHGL 477


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 233/483 (48%), Gaps = 17/483 (3%)

Query: 29  PHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFL-KERCKSSGQGDINLITP 87
           PH+  P S +S  +  + +T    +   RL++    ++  FL   +  S  Q  +  +  
Sbjct: 78  PHSLSPPSLLSFFK--WLST----QHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVS 131

Query: 88  ----NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
               N A  +F  +L    +      F++L      + ++   +  F+ +    L    +
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           +   L +   K+   S  +     IL   + P+   F  L+  LC E +I EA  LF + 
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                 P V ++NTLING C++G+      L   M   N  F     P+  TY+ +I+GL
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMME-NRVF-----PDVFTYSVLINGL 305

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CKEG +D A +LFL+M D  + P+ VT+T++I G C     +    ++ +M+ +GV+PDV
Sbjct: 306 CKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDV 365

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           +T++ +++ LCK G + +A +L+  M  RG+ P+ +TY  LIDG C    ++ A ++   
Sbjct: 366 ITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKE 425

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   D V++  LI+ +C+   V EA     EML  GIKP   TY  +  G  +   
Sbjct: 426 MVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGD 485

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V+   KL  EM+ +       TYN  ++GLCK G +  A  L  A+ +     + ++YN 
Sbjct: 486 VKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNI 545

Query: 504 LID 506
           L++
Sbjct: 546 LLE 548



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 160/299 (53%), Gaps = 6/299 (2%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV  +N L++ LC+      A  LF E+    G+ G+  +P  V++NT+I+G CK G +
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEI----GKRGL--RPTVVSFNTLINGYCKSGNL 276

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+   L   M +  + PDV TY+ +I G C     ++A +LF+EM D+G+ P+ VTF+ +
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  C  G+ D    + + M+ +GV P+  TYNTLI+G C    +  A+KL + M   G 
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D  +Y  LI+  CK  D+E AL +  EM+ +GI+   V +  L  G     QV  A +
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              EM    +  D  TY   I G CK G V    +L + ++   +   +V+YN L++GL
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 139/249 (55%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           + D L K      A   + ++ D    PDV  +  ++   C  +  NEA+ LF E+  +G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++P VV+F+ +++  CK+G +D+  RL   M+   V P+ +TY+ LI+G C   ++D A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           KLF+ M   G + + V++ TLIN +C     +  + +Y +ML KG+KP V+TYNTL  GL
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++  +  A KL  EM +  +  D +TY   IDG CK G +  ALE+ + +     EL+ 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 499 VSYNCLIDG 507
           V++  LI G
Sbjct: 436 VAFTALISG 444



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 109/220 (49%)

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           + ++ ++  +  +  +++A + F  +    +Q    +   + D L K      A    E 
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++  G  P+   +N L+   C   KI+ A+ LF  +   G    VVS+NTLIN YCK+ +
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +++   L   M+   + P V TY+ L  GL +  Q++ A KLF EM    +  +  T+  
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I+G C +G     +E+++ +     + ++++YN LI+GL
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 178/361 (49%), Gaps = 6/361 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           + +  L  AG+ P+    ++L+    + G+++    V   +LR    P  VTF +L+ G+
Sbjct: 100 AFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGM 159

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C  S +  A AL          PDV+TY   I GLC+TG    A+ +FEEM     E G+
Sbjct: 160 CKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC----ERGL 215

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              PNTV   T+ID  CKEG V    EL  +M    +  D+V Y +++ GFC   D   A
Sbjct: 216 --NPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAA 273

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +  EM   G++PD VT++ ++D  CK G++D A  + + M   GV  +  TY  LI G
Sbjct: 274 NDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 333

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                +   A ++   M   G   D  +Y  +I+ +CKN DV+       EM +KG  P 
Sbjct: 334 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 393

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +VTYN +  G   + Q++ A  L + M    V  +  TYN  +DG CK G V +  EL  
Sbjct: 394 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 453

Query: 488 A 488
           A
Sbjct: 454 A 454



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 10/343 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD MLR     P V +FN L   + K    +   +L   +  AG+ PD+YT+   I   
Sbjct: 136 VFDEMLR-RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 194

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR+     +   +      PN V  T+LI   C E  +     L  +      + D+
Sbjct: 195 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADL 254

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN L+NG CR      A ++ EEM           KP+ VTY T+IDG CKEG +D A
Sbjct: 255 VAYNALVNGFCRVRDMKAANDIVEEMRKDG------LKPDKVTYTTLIDGCCKEGELDTA 308

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+  +M DE +  D VTYT++I G   A    +A+R+  EMM+ G+QPD  T+++++D 
Sbjct: 309 MEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 368

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CKNG +    + L+ M  +G NP   TYN +++G+C   ++ +A  L  +M + G   +
Sbjct: 369 FCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPN 428

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            ++YN L++ +CK+  V +   L S   +KG+      Y +L 
Sbjct: 429 DITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLI 468



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA A +         P+   +N L+  + R+G    A N+F+EM       GV  +P 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEML----RRGV--QPT 148

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VT+NT++ G+CK   ++ A  L   M    I PDV TY + I+G C      +A  +F 
Sbjct: 149 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 208

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM ++G+ P+ V  + ++D  CK G +     L   M  RGV  +   YN L++G+C   
Sbjct: 209 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 268

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A  +   M  +G   D V+Y TLI+  CK  +++ A+ +  EM  +G+    VTY 
Sbjct: 269 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 328

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  GL +  +   A ++  EM    +  D  TY   ID  CK+G V    +  + +++ 
Sbjct: 329 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 388

Query: 493 KYELNIVSYNCLIDG 507
                IV+YN +++G
Sbjct: 389 GKNPGIVTYNVVMNG 403



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 127/240 (52%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A   +L + D  + P+   +  ++R    +     A+ +F EM+ +GVQP VVTF+ 
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M  +CK   ++ A+ L  LM   G+ P+ YTY   I G C T +I  A ++F  M   G
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V   TLI+ +CK  DV   L L  EM ++G+K  +V YN L  G   +  ++ A 
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + +EMR++ +  D  TY   IDG CK G +  A+E+ + + D    L+ V+Y  LI GL
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 221/458 (48%), Gaps = 62/458 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P  S+++ +   L +    +    LF+ + S G+ PD+YT++ILI+ FCK+G +      
Sbjct: 453 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSW 512

Query: 160 --------------------HGFV----------VLGRILRSCFTPNAVTFTSLIKGLCA 189
                               H ++          +  R++ +   PN +T+++L+ GLC 
Sbjct: 513 FDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCK 572

Query: 190 ESRIMEAAALFTK----------------HRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
                +A  ++ K                    +  P+V TY  LI+GLC+    + A  
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L + M++ NG     C+PN + Y+ +IDG CK G +D A+E+F +M      P V TYTS
Sbjct: 633 LLDVMSS-NG-----CEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTS 686

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I         + A ++  +M++    P+VVT++ ++D LC+ G+  KA +LL +M  RG
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            NPN  TY +LIDG   + K+D + +LF  M + GC  + V+Y  LIN  C    ++EA 
Sbjct: 747 CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAH 806

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           SL SEM        V  Y ++  G  +  +   +L L +E+  + + +    Y   ID  
Sbjct: 807 SLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSF 864

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVS---YNCLIDGL 508
            K+G + +ALEL + + +    LNI S   Y  LI  L
Sbjct: 865 SKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQAL 902



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 195/408 (47%), Gaps = 22/408 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     +D    + K +   G  PD  T+S +I   C+  +V   F++   +      P
Sbjct: 429 CLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIP 488

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A + F +     C P V TY  L++   +T     A ++F
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF 548

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---------------- 279
             M +        C PNT+TY+ ++DGLCK G   KA E++ KM                
Sbjct: 549 HRMVDAG------CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGE 602

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             ++I P+VVTY ++I G C A+   +A+ L   M   G +P+ + +  ++D  CK GK+
Sbjct: 603 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKL 662

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P  +TY +LID      ++D A K+   M  + C  +VV+Y  +
Sbjct: 663 DNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAM 722

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+  C+  + ++AL L S M  +G  P VVTY +L  GL +  +V+ +L+LF +M     
Sbjct: 723 IDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC 782

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A +  TY   I+  C +G + EA  L   ++ + +   +  Y  ++ G
Sbjct: 783 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQG 830



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 199/438 (45%), Gaps = 29/438 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I   M+    +P P S FN L       + Y     L  R+   G  P    ++I I   
Sbjct: 331 IISMMMNEGCNPNP-SLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389

Query: 153 CKMGRV-SHGFVVLGR-----ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           C    + S   + L       +L S    N V   +  + LC   +  +A  +       
Sbjct: 390 CSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK 449

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD  TY+ +I  LC       A  LF+EM +     GV+  P+  TY  +ID  CK 
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS----VGVI--PDVYTYTILIDSFCKV 503

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A+  F +M+    +P VVTYT+++  +       +A  +F  M+D G  P+ +T+
Sbjct: 504 GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY 563

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVN----------------PNTYTYNTLIDGYCL 370
           S ++D LCK G+  KA  +   MI    N                PN  TY  LIDG C 
Sbjct: 564 SALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCK 623

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+  A++L   M SNGC  + + Y+ LI+ +CK   ++ A  ++  M   G  PTV T
Sbjct: 624 AHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHT 683

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y +L   +F+  +++ A+K+  +M  +    +  TY   IDGLC+ G   +AL+L   + 
Sbjct: 684 YTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 743

Query: 491 DSKYELNIVSYNCLIDGL 508
                 N+V+Y  LIDGL
Sbjct: 744 KRGCNPNVVTYTSLIDGL 761



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 201/454 (44%), Gaps = 54/454 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +++N L   LA     D    + K ++  G   D +T        CK GR S   V+
Sbjct: 205 PSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM 264

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              I R  F  + V  T +I GL   S   EA +   + R  +C P+V TY TL+ G  +
Sbjct: 265 ---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLK 321

Query: 225 TGH-----TIVAL----------NLFEEMANG--------------NGEFGVVCKPNTVT 255
                    I+++          +LF  + +               N   G  C P  V 
Sbjct: 322 KKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVV 381

Query: 256 YNTIIDGLCK------EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           YN  I  +C          +  A++++ +M   +   + V   +  R  C    +++A +
Sbjct: 382 YNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQ 441

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +   MM +G  PD  T+S ++  LC+  K++KA  L + M   GV P+ YTY  LID +C
Sbjct: 442 IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFC 501

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I+ AR  F  MES GC   VV+Y  L++ Y K K V +A  ++  M+  G  P  +
Sbjct: 502 KVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI 561

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM----------------RRNHVAADTYTYNNFIDGL 473
           TY+ L  GL +  + ++A +++ +M                  + +A +  TY   IDGL
Sbjct: 562 TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGL 621

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK+  V++A EL   +  +  E N + Y+ LIDG
Sbjct: 622 CKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDG 655



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 149/383 (38%), Gaps = 61/383 (15%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VLGR+L             +++  C      +A     + + F   P   TYN L+  L 
Sbjct: 170 VLGRLL-----------NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLA 218

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G   +   + +EM+    E G     +  T       LCKEG   +  +  + ++ E+
Sbjct: 219 TAGQMDMGFRVQKEMS----ELGFC--TDKFTVGCFAQALCKEG---RWSDALVMIERED 269

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D V  T +I G   A+ ++EA      M      P+VVT+  ++    K  ++    
Sbjct: 270 FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCK 329

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R++ +M+  G NPN   +N+L+  YC      +A KL   M   GC    V YN  I   
Sbjct: 330 RIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389

Query: 404 CKNKDVEE------ALSLYSEMLS-----------------------------------K 422
           C  +++        A  +Y EML+                                   K
Sbjct: 390 CSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK 449

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P   TY+ +   L E  +VE+A  LF EM+   V  D YTY   ID  CK G + +A
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
              F  +       ++V+Y  L+
Sbjct: 510 RSWFDEMESVGCSPSVVTYTALL 532



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 45/299 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   + K++  D  + +  ++  +   P++ T++ +I+  C++G       +
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +    PN VT+TSLI GL    ++  +  LFT+     C P+  TY  LIN  C 
Sbjct: 739 LSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCA 798

Query: 225 TG-----HT----------------------------IVALNLFEEMANGNGEFGVVCKP 251
            G     H+                            I +L L EE+ + +G   +    
Sbjct: 799 AGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELES-HGMVSI---- 853

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV---TYTSVIRGFCYANDWNEAK 308
               Y  +ID   K G ++KA EL  +M + + + ++    TYTS+I+  C A+   +A 
Sbjct: 854 -APVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAF 912

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            L+ E+  +GV P++  F  ++  L K  K ++A +L   M   GVN   +  N   DG
Sbjct: 913 ELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN---WQSNNSFDG 968



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 11/226 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+      P V ++  L   L K+   D  L LF ++ + G  P+  T+ +LIN  C  G
Sbjct: 741 MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG 800

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK---HRVFACEPDVF 213
            +     +L  + ++ +      + S+++G     + + +  L  +   H + +  P   
Sbjct: 801 LLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAP--- 855

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            Y  LI+   + G    AL L +EM   +    +  K    TY ++I  LC    ++KA 
Sbjct: 856 VYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKD---TYTSLIQALCLASQLEKAF 912

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           EL+ ++  + + P++  +  +I+G    N WNEA +L   M D+GV
Sbjct: 913 ELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/215 (20%), Positives = 78/215 (36%), Gaps = 3/215 (1%)

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++R  C    W +A      + D G +P   T++ ++  L   G+MD   R+ + M   G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
              + +T        C   +   A    V +E      D V    +I+   +    +EA+
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAI 294

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           S    M      P VVTY TL  G  +  Q+    ++   M       +   +N+ +   
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSY 354

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C +     A +L   +         V YN  I  +
Sbjct: 355 CNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 207/401 (51%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++NIL   L +    +   +L++++ S G+ P + +++ LI   CK G +   + +L 
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            IL     PNAVT+T LI G   +     A  +F +       P   T+NT+INGL +TG
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                ++  ++  N   + G V    ++TYN+IIDG  KEG VD A   + +M +  I+P
Sbjct: 549 R----VSETQDKLNNFIKQGFVS--TSITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV+TYTS+I G C +N    A  +  +M  +G++ DVV +S ++D  CK   M+ AS+  
Sbjct: 603 DVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFF 662

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             ++  G+ PNT  YN++I G+   + ++ A  L   M  N    D+  Y ++I    K 
Sbjct: 663 TELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKE 722

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +  AL LYSEMLSK I P +V Y  L  GL    Q+E A K+  EM  N++      Y
Sbjct: 723 GKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVY 782

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  I G  + G + EA  L   + D     +  +Y+ L++G
Sbjct: 783 NILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 213/429 (49%), Gaps = 13/429 (3%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           GD+NL     AL +FD ++      P V  F++L    +K    +    L+ R+   G+ 
Sbjct: 339 GDVNL-----ALQLFDEVVE-GGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQ 392

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+++  + L+  F +   + H + +    +    T N VT+  L+K L    ++ EA  L
Sbjct: 393 PNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNL 451

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           + K       P + +YN LI G C+ G    A ++ + +     E G+  KPN VTY  +
Sbjct: 452 WEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL----ERGL--KPNAVTYTLL 505

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDG  K+G  ++A  +F +M   NI P   T+ +VI G       +E +      + QG 
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
               +T++ I+D   K G +D A      M   G++P+  TY +LIDG C ++KI  A +
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +   M+  G   DVV+Y+ LI+ +CK  D+E A   ++E+L  G+ P  V YN++  G  
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
            ++ +E AL L  EM +N V  D   Y + I GL K G +  AL+L+  +       +IV
Sbjct: 686 HLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIV 745

Query: 500 SYNCLIDGL 508
            Y  LI+GL
Sbjct: 746 MYTVLINGL 754



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 203/397 (51%), Gaps = 8/397 (2%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++  C+ + K ++ V   FK     GL  D   +SIL+   C+   ++    +L  +   
Sbjct: 226 VMRACMKEGK-FEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREF 284

Query: 172 CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
            + P+  T+T++I     +   +EA  L  +        +V    +L+ G C  G   +A
Sbjct: 285 GWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLA 344

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
           L LF+E+  G    GVV  P+ V ++ +I+G  K G ++KA EL+ +MK   I P+V   
Sbjct: 345 LQLFDEVVEG----GVV--PDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIV 398

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            S++ GF   N    A  LF E ++ G+  +VVT+++++  L + GK+++A  L E M+ 
Sbjct: 399 NSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVS 457

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +G+ P+  +YN LI G+C    +D A  +  S+   G   + V+Y  LI+ + K  D E 
Sbjct: 458 KGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER 517

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A  ++ +M++  I PT  T+NT+  GL +  +V       +   +    + + TYN+ ID
Sbjct: 518 AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIID 577

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G  K G V  AL  +R + +S    ++++Y  LIDGL
Sbjct: 578 GFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 186/393 (47%), Gaps = 7/393 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +++ M+    +P  VS  N++ G   K    D   S+ K +   GL P+  T+++
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGH-CKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ F K G     FVV  +++ +   P   TF ++I GL    R+ E            
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
                 TYN++I+G  + G    AL  + EM     E G+   P+ +TY ++IDGLCK  
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMC----ESGI--SPDVITYTSLIDGLCKSN 618

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A E+   MK + +  DVV Y+++I GFC  +D   A + F E++D G+ P+ V ++
Sbjct: 619 KIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYN 678

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++        M+ A  L + MI   V  +   Y ++I G     K+  A  L+  M S 
Sbjct: 679 SMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSK 738

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             + D+V Y  LIN    N  +E A  +  EM    I P+V+ YN L  G F    ++ A
Sbjct: 739 DIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEA 798

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
            +L DEM    +  D  TY+  ++G  K    L
Sbjct: 799 FRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTL 831



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 194/400 (48%), Gaps = 7/400 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           ++++IL   + +    +    L K +   G  P   T++ +I    K G       +   
Sbjct: 256 AAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDE 315

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++      N +   SL+KG C    +  A  LF +       PDV  ++ LING  + G 
Sbjct: 316 MVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGD 375

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  L+  M       G+  +PN    N++++G  ++  ++ A  LF +  +  I  +
Sbjct: 376 MEKAYELYTRMK----LMGI--QPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-N 428

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           VVTY  +++        NEA  L+ +M+ +G+ P +V+++ ++   CK G MDKA  +L+
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            ++ RG+ PN  TY  LIDG+      + A  +F  M +        ++NT+IN   K  
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V E     +  + +G   T +TYN++  G F+   V+ AL  + EM  + ++ D  TY 
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYT 608

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + IDGLCKS  +  ALE+   ++    +L++V+Y+ LIDG
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDG 648



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 200/438 (45%), Gaps = 52/438 (11%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN L     +       +  F+ +    L P +   + L+    +   V     +   ++
Sbjct: 153 FNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMV 212

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                 +  T   +++    E +  E    F + +    E D   Y+ L+  +CR     
Sbjct: 213 ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLN 272

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG-FVDKAKELFLKMKDENINP-- 286
           +A  L +EM     EFG V  P+  TY  +I    K+G FV+      L++KDE ++   
Sbjct: 273 LACELLKEMR----EFGWV--PSKGTYTAVIVACVKQGNFVEA-----LRLKDEMVSVGL 321

Query: 287 --DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +V+   S+++G+C   D N A +LF E+++ GV PDVV FSV+++   K G M+KA  
Sbjct: 322 PMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYE 381

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   G+ PN +  N+L++G+   + ++HA  LF     +G + +VV+YN L+ W  
Sbjct: 382 LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLG 440

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL---------------------------- 436
           +   V EA +L+ +M+SKGI P++V+YN L L                            
Sbjct: 441 ELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAV 500

Query: 437 -------GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                  G F+    ERA  +F++M   ++A   +T+N  I+GL K+G V E  +     
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNF 560

Query: 490 RDSKYELNIVSYNCLIDG 507
               +    ++YN +IDG
Sbjct: 561 IKQGFVSTSITYNSIIDG 578



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 155/338 (45%), Gaps = 7/338 (2%)

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R  F  ++  F  L+K     ++I +A   F         P V   N L+  + R     
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L++EM    G +G     +  T + ++    KEG  ++ ++ F + K   +  D  
Sbjct: 203 DARQLYDEMVE-RGIYG-----DCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y+ +++  C   D N A  L  EM + G  P   T++ ++    K G   +A RL + M
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           +  G+  N     +L+ GYC+   ++ A +LF  +   G + DVV ++ LIN   K  D+
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E+A  LY+ M   GI+P V   N+L  G  E + +E A  LFDE    H   +  TYN  
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE-HGITNVVTYNIL 435

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  L + G V EA  L+  +       ++VSYN LI G
Sbjct: 436 LKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILG 473



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/210 (20%), Positives = 79/210 (37%), Gaps = 5/210 (2%)

Query: 303 DWNEAKRLFIEMMDQ-----GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           D   + ++F+E + +     G + D   F+ ++    +  K+  A      M+   + P 
Sbjct: 125 DATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPW 184

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
               N L+      + +  AR+L+  M   G   D  + + ++    K    EE    + 
Sbjct: 185 VPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFK 244

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
           E   +G++     Y+ L   +     +  A +L  EMR         TY   I    K G
Sbjct: 245 EAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQG 304

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             +EAL L   +      +N++    L+ G
Sbjct: 305 NFVEALRLKDEMVSVGLPMNVIVTRSLMKG 334



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 6/150 (4%)

Query: 364 LIDGYCLTDKIDHARKLFVS--MESNG---CMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
           L++ Y   D    A K+FV   +E +G      D   +N L+  + +   + +A+  +  
Sbjct: 117 LLNNYVFGDATPSA-KVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRT 175

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           ML   + P V   N L   +   + V  A +L+DEM    +  D YT +  +    K G 
Sbjct: 176 MLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGK 235

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             E  + F+  +    E++  +Y+ L+  +
Sbjct: 236 FEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 226/493 (45%), Gaps = 78/493 (15%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  AL +F  +LR    P  V S+N L    +K    D    LF ++    + PD+ T++
Sbjct: 138 PELALAVFGRLLRTGLGPD-VCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYN 196

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG-------------------- 186
            LI+  CK   +     VL +++ +   PN  T+ SLI G                    
Sbjct: 197 SLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSS 256

Query: 187 ---------------LCAESRIMEAAALFTKHRVFACEPDVFTYNTL------------- 218
                          LC  +RI EA  +F    +   +P++ +Y+TL             
Sbjct: 257 GLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANM 316

Query: 219 ----------------------INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
                                 IN   R G    A+ +FE+M N     G++  P+TVT+
Sbjct: 317 NSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTF 370

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            T+I  LC+ G +D A   F  M D  + P    Y  +I+G C   +  +AK L  EMM+
Sbjct: 371 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMN 430

Query: 317 QGVQPDVVT-FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + + P  V  FS I++ L K G++ +   +++LM+  G  PN  T+N+L++GYCL   ++
Sbjct: 431 KDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNME 490

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L  +M S G   +   Y TL++ YCKN  +++AL+++ +ML KG+KPT V YN + 
Sbjct: 491 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GLF+  +   A K+F EM  +       TY   + GLC++    EA  L   +     +
Sbjct: 551 HGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 610

Query: 496 LNIVSYNCLIDGL 508
            +I+++N +I  +
Sbjct: 611 FDIITFNIVISAM 623



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 200/389 (51%), Gaps = 13/389 (3%)

Query: 126 VLSLFKRLN------SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
            + LFKR++      +A   P IYT++ILI+C+ +M R      V GR+LR+   P+  +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           + +LI G   E  + +A  LF K    +  PDV TYN+LI+GLC+T   + +  + E+M 
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
           +         +PN  TYN++I G    G   ++  +F +M    + P VV   S I   C
Sbjct: 220 DAG------IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALC 273

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
             N   EAK +F  M+ +G +P+++++S ++      G     + L+ LM+ +G+ PN  
Sbjct: 274 RHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHR 333

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            +N LI+ Y     +D A  +F  M++ G + D V++ T+I+  C+   +++AL  ++ M
Sbjct: 334 FFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 393

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY-NNFIDGLCKSGF 478
           +  G+ P+   Y  L  G     ++ +A +L  EM    +      Y ++ I+ L K G 
Sbjct: 394 VDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGR 453

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           V E  ++   +  +    N+V++N L++G
Sbjct: 454 VAEGKDIMDLMVQTGQRPNVVTFNSLMEG 482



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 189/404 (46%), Gaps = 6/404 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M+   P P  +S   +L G  A+   +  + SL   + S G+ P+    +IL
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEG-CFANMNSLVNLMVSKGIVPNHRFFNIL 338

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN + + G +    ++   +      P+ VTF ++I  LC   R+ +A   F        
Sbjct: 339 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 398

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P    Y  LI G C  G  + A  L  EM N +     +  P    +++II+ L KEG 
Sbjct: 399 PPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLFKEGR 453

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V + K++   M      P+VVT+ S++ G+C   +  EA  L   M   G++P+   +  
Sbjct: 454 VAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 513

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  CKNG++D A  +   M+ +GV P +  YN ++ G     +   A+K+F  M  +G
Sbjct: 514 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESG 573

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               + +Y  ++   C+N   +EA  L  ++ +  +K  ++T+N +   + ++ + + A 
Sbjct: 574 TTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAK 633

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +LF  +    +    +TYN  I  L K     EA  LF ++  S
Sbjct: 634 ELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKS 677



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 196/440 (44%), Gaps = 42/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L    +    +   + +FK ++S+GL P +   +  I+  C+  R+     +
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 284

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAES---------RIMEAAALFTKHRVF--------- 206
              ++     PN +++++L+ G  AE           +M +  +   HR F         
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYAR 344

Query: 207 -----------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                               PD  T+ T+I+ LCR G    AL+ F  M     + GV  
Sbjct: 345 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV----DIGV-- 398

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY-TSVIRGFCYANDWNEAK 308
            P+   Y  +I G C  G + KAKEL  +M +++I P  V Y +S+I          E K
Sbjct: 399 PPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGK 458

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            +   M+  G +P+VVTF+ +M+  C  G M++A  LL+ M   G+ PN Y Y TL+DGY
Sbjct: 459 DIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 518

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C   +ID A  +F  M   G     V YN +++   + +    A  ++ EM+  G   ++
Sbjct: 519 CKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSI 578

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            TY  +  GL   +  + A  L +++   +V  D  T+N  I  + K G   EA ELF A
Sbjct: 579 QTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAA 638

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           I        + +YN +I  L
Sbjct: 639 ISTYGLVPTVHTYNLMISNL 658



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 36/320 (11%)

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C  G  + A+ LF+ M            P   TYN +ID   +    + A  +F ++   
Sbjct: 93  CSDGPAL-AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRT 151

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PDV +Y ++I GF    + ++A  LF +M++Q V PDVVT++ ++D LCK  +M K+
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            R+LE M+  G+ PN  TYN+LI GY        + ++F  M S+G +  VV+ N+ I+ 
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG------------------------- 437
            C++  ++EA  ++  M+ KG KP +++Y+TL  G                         
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331

Query: 438 --LFEI--------HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
              F I          +++A+ +F++M+   +  DT T+   I  LC+ G + +AL  F 
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 391

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + D     +   Y CLI G
Sbjct: 392 HMVDIGVPPSEAVYRCLIQG 411



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 181/415 (43%), Gaps = 42/415 (10%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV----------- 158
           FNIL    A+    D  + +F+ + + G+ PD  T + +I+  C++GR+           
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 159 -------------------SHGFVVLGRIL------RSCFTPNAVTFTSLIKGLCAESRI 193
                              +HG +V  + L      +    P    F+S+I  L  E R+
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            E   +          P+V T+N+L+ G C  G+   A  L + MA+      +  +PN 
Sbjct: 455 AEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS------IGIEPNC 508

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             Y T++DG CK G +D A  +F  M  + + P  V Y  ++ G   A     AK++F E
Sbjct: 509 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHE 568

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M++ G    + T+ V++  LC+N   D+A+ LLE +    V  +  T+N +I       +
Sbjct: 569 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 628

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A++LF ++ + G +  V +YN +I+   K +  EEA +L+  +   G  P     N 
Sbjct: 629 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 688

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           +   L +  +V +A      +  N++  +  T +       + G   E ++L  A
Sbjct: 689 IVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPA 743


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 210/399 (52%), Gaps = 6/399 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N L      +   D  L + +R+ + G+ P++ T++ LI  +CK   +   F +  
Sbjct: 222 VVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYE 281

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++RS   P+ VT ++L+ GLC + +  EA ALF +       P+  TY TLI+ L +  
Sbjct: 282 GMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKAR 341

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               +L L  EM +     GVV   + V Y  ++D L KEG +++AK++    + +NI P
Sbjct: 342 RGSESLGLLGEMVS----RGVVM--DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITP 395

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           + VTYT ++   C A + + A+++ ++M ++ V P+VVTFS I++ L K G + KA+  +
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G+ PN  TY TLIDG+      + A  ++  M   G   +    ++L+N   KN
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKN 515

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            ++E A +L+ +M  +G+    V Y TL  GLF+   +  A K+  E+   +++ D   Y
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVY 575

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N FI+ LC  G   EA    + +R++  E +  +YN +I
Sbjct: 576 NVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 188/368 (51%), Gaps = 6/368 (1%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D+   + LI+ +CK+  ++    V+ R+       + V + SL+ G         A  + 
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + +    EP+V TY  LI   C+      A +L+E M       GV+  P+ VT + ++
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS----GVL--PDVVTLSALV 299

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DGLC++G   +A  LF +M    + P+ VTY ++I     A   +E+  L  EM+ +GV 
Sbjct: 300 DGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVV 359

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            D+V ++ +MD L K GK+++A  +L       + PN  TY  L+D +C    ID A ++
Sbjct: 360 MDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQV 419

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
            + ME    + +VV+++++IN   K   + +A     +M   GI P VVTY TL  G F+
Sbjct: 420 LLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK 479

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
               E AL ++ +M    V A+ +  ++ ++GL K+G +  A  LF+ + +    L+ V+
Sbjct: 480 FQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVN 539

Query: 501 YNCLIDGL 508
           Y  L+DGL
Sbjct: 540 YTTLMDGL 547



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 15/414 (3%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            + E CK  G         +EA  +++ M+R     P V + + L   L ++  +    +
Sbjct: 263 LIGEYCKGKGM--------DEAFSLYEGMVR-SGVLPDVVTLSALVDGLCRDGQFSEAYA 313

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           LF+ ++  G+ P+  T+  LI+   K  R S    +LG ++      + V +T+L+  L 
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            E +I EA  +    +     P+  TY  L++  CR G+   A  +  +M     E  V+
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME----EKSVI 429

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             PN VT+++II+GL K G + KA +   KMKD  I P+VVTY ++I GF        A 
Sbjct: 430 --PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAAL 487

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            ++ +M+ +GV+ +      +++ L KNG ++ A  L + M  RG+  +   Y TL+DG 
Sbjct: 488 DVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             T  +  A K+   +       D V YN  IN  C      EA S   EM + G++P  
Sbjct: 548 FKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ 607

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            TYNT+        +  +ALKL  EM+RN +  +  TY   + GL ++G V +A
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA 661



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 182/398 (45%), Gaps = 41/398 (10%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L KN + +   +LFK ++  GL  D   ++ L++   K G +   F V   ++   
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
            +P+AV +   I  LC   +  EA +   + R    EPD  TYNT+I   CR G T  AL
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP------ 286
            L +EM   +       KPN +TY T++ GL + G V KAK L  +M      P      
Sbjct: 628 KLLKEMKRNS------IKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQ 681

Query: 287 -----------------------------DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
                                        D+  Y +++   C       A  +  EM+ +
Sbjct: 682 RVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTR 741

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ PD +TF+ ++   CK+  +D A  +   M+ +G++PN  T+NTL+ G     +I  A
Sbjct: 742 GIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 801

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             +   M+  G   + ++Y+ L+  Y K  +  EAL LY EM+SKG  P   TYN+L   
Sbjct: 802 DTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             +   + +A +LF EM+R  V   + TY+  ++G  K
Sbjct: 862 FAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 899



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 179/370 (48%), Gaps = 10/370 (2%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL- 199
           D  +++I +    + G       VL  + +   + + VT ++ + GLC    + EAAAL 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 200 --FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
               + R      DV  +N LI+G C+      AL + E M       GV    + V YN
Sbjct: 174 EMLVRGRGIDG-LDVVGWNALIDGYCKVQDMAAALAVVERMTTQ----GVAL--DVVGYN 226

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           +++ G    G  D A E+  +MK + + P+VVTYT++I  +C     +EA  L+  M+  
Sbjct: 227 SLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS 286

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           GV PDVVT S ++D LC++G+  +A  L   M   GV PN  TY TLID      +   +
Sbjct: 287 GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSES 346

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             L   M S G + D+V Y  L++   K   +EEA  +     S  I P  VTY  L   
Sbjct: 347 LGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDA 406

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
                 ++ A ++  +M    V  +  T+++ I+GL K G + +A +  R ++DS    N
Sbjct: 407 HCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPN 466

Query: 498 IVSYNCLIDG 507
           +V+Y  LIDG
Sbjct: 467 VVTYGTLIDG 476



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 204/464 (43%), Gaps = 68/464 (14%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  L   L K    +    + +   S  + P+  T+++L++  C+ G +     VL ++ 
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN VTF+S+I GL     + +AA    K +     P+V TY TLI+G  +     
Sbjct: 425 EKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQE 484

Query: 230 VALNLFEEM--------------------ANGN-----------GEFGVVCKPNTVTYNT 258
            AL+++ +M                     NGN            E G++   + V Y T
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLL--DHVNYTT 542

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++DGL K G +  A ++  ++ ++N++PD V Y   I   C    ++EAK    EM + G
Sbjct: 543 LMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG 602

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++PD  T++ ++   C+ GK  KA +LL+ M    + PN  TY TL+ G      +  A+
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAK 662

Query: 379 KLFVSMESNG----------------------------------CMH-DVVSYNTLINWY 403
            L   M S G                                   +H D+  YNTL++  
Sbjct: 663 FLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVL 722

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C +     A  +  EML++GI P  +T+N L LG  +   ++ A  ++ +M    ++ + 
Sbjct: 723 CCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNI 782

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            T+N  + GL  +G + EA  +   ++    E N ++Y+ L+ G
Sbjct: 783 ATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTG 826



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 188/420 (44%), Gaps = 35/420 (8%)

Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           GCL K   Y       +++  +G+ P++ T+  LI+ F K         V   +L     
Sbjct: 446 GCLGKAADY------MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVE 499

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
            N     SL+ GL     I  A ALF          D   Y TL++GL +TG+   A  +
Sbjct: 500 ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKV 559

Query: 235 FEEMANGN------------------GEFGVV-----------CKPNTVTYNTIIDGLCK 265
            +E+   N                  G+F               +P+  TYNT+I   C+
Sbjct: 560 GQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCR 619

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG   KA +L  +MK  +I P+++TYT+++ G   A    +AK L  EM   G  P  +T
Sbjct: 620 EGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLT 679

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
              ++     + + D    + ELM+  G++ +   YNTL+   C      +A  +   M 
Sbjct: 680 HQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEML 739

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           + G   D +++N LI  +CK+  ++ A ++Y++ML +G+ P + T+NTL  GL    ++ 
Sbjct: 740 TRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A  +  +M++  +  +  TY+  + G  K    +EAL L+  +    +     +YN L+
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLM 859



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 6/385 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+   CL     +    S  K + + GL PD  T++ +I   C+ G+ S    +
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R+   PN +T+T+L+ GL     + +A  L  +       P   T+  ++     
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +    V L + E M       G     +   YNT++  LC  G    A  +  +M    I
Sbjct: 690 SRRPDVILEIHELM------MGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+ ++I G C ++  + A  ++ +M+ QG+ P++ TF+ ++  L   G++ +A  
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M   G+ PN  TY+ L+ GY        A +L+  M S G +    +YN+L++ + 
Sbjct: 804 VLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFA 863

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L+SEM  +G+  T  TY+ L  G  ++        L  +M+         
Sbjct: 864 KAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKG 923

Query: 465 TYNNFIDGLCKSGFVLEALELFRAI 489
           T ++      + G   EA  L + +
Sbjct: 924 TISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 6/263 (2%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELF----LKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +T+T N+II   C    +  A  L            +  D V+Y   +           A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI-WRGVNP-NTYTYNTLI 365
             +  EM  +GV  D VT S  +  LC+ G + +A+ L E+++  RG++  +   +N LI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DGYC    +  A  +   M + G   DVV YN+L+  +  + D + AL +   M + G++
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVE 254

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P VVTY  L     +   ++ A  L++ M R+ V  D  T +  +DGLC+ G   EA  L
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           FR +       N V+Y  LID L
Sbjct: 315 FREMDKIGVAPNHVTYCTLIDSL 337


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 215/421 (51%), Gaps = 9/421 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+ +    P + +F+ L     K +  +TV SL + + S GL P+IYT++I 
Sbjct: 212 EALEMYRRMV-LEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTIC 270

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    + GR+     ++ R+      P+ VT+T LI  LC   ++ +A  LF K +  + 
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY T+++     G        + EM A+G         P+ +T+  +++ LCK G
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYA-------PDVITFTILVNALCKAG 383

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  L   M+ + + P++ TY ++I G    N  ++A  LF  M   GV P   T+ 
Sbjct: 384 NIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYI 443

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           + +D   K+G+ DKA    E M  RG+ PN    N  +       ++  A+ +F  ++SN
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YN ++  Y K   V+EA+ L S+M     +P ++  N+L   L++  +V+ A
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            K+F  ++   +A    TYN  I GL K G V  A+ELF ++  +    N +++N ++D 
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623

Query: 508 L 508
           L
Sbjct: 624 L 624



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 198/379 (52%), Gaps = 6/379 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F ++  AG   + Y+++ LI+   + G       +  R++     P+  TF++L+     
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                   +L  +      +P+++TY   I  L R G    A  + + M +        C
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG------C 295

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ VTY  +ID LC  G +D A ELF+KMK  +  PD VTY +++  F    D    K 
Sbjct: 296 GPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKE 355

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            + EM   G  PDV+TF+++++ LCK G +D+A  LL++M  +GV PN +TYNTLI G  
Sbjct: 356 FWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLL 415

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             +++D A  LF +ME+ G +    +Y   I++Y K+   ++AL  + +M  +GI P +V
Sbjct: 416 RVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIV 475

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
             N     L E+ ++  A  +F+ ++ N +A D+ TYN  +    K+G V EA+EL   +
Sbjct: 476 ACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM 535

Query: 490 RDSKYELNIVSYNCLIDGL 508
            +++ E +I+  N LI+ L
Sbjct: 536 SENQCEPDIIVINSLINTL 554



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 163/303 (53%), Gaps = 6/303 (1%)

Query: 175  PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
            P   ++  LI+G         A  LFT+ +   C PDVFTYN L++   ++G       L
Sbjct: 788  PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847

Query: 235  FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
            +E+M   +      CKPNT+T+N II  L K   +DKA +LF  +   + +P   TY  +
Sbjct: 848  YEQMICSS------CKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901

Query: 295  IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
            + G   +    EAK LF EM+D G +P+   ++++++   K G ++ A  L + M+  G+
Sbjct: 902  LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 355  NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             P+  +Y +L+   C   ++D A   F  ++  G   D ++YN +I+   ++  +EEAL+
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 415  LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
            LY EM S+GI P + TYN+L L L     VE+A KL++E++   +  + +TYN  I G  
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 475  KSG 477
             SG
Sbjct: 1082 MSG 1084



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 209/456 (45%), Gaps = 45/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IF+  L+ +   P   ++N++  C +K    D  + L   ++     PDI   + L
Sbjct: 492 EAKVIFNR-LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSL 550

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN   K GRV   + +  R+      P  VT+ +LI GL  E ++  A  LF       C
Sbjct: 551 INTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGC 610

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T+NT+++ LC+     +AL +  +M   N      C P+ +T+NTII GL  E  
Sbjct: 611 PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN------CMPDVLTFNTIIHGLVIEKR 664

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRG----------FCYANDWNE-----AKRLFIE 313
           V  A  LF +MK + + PD VT  +++ G          F  A D+         R F E
Sbjct: 665 VSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723

Query: 314 MMDQGVQPDVVTFSVIM-------DELCKNGKM----------DKASRLLELMIWR---- 352
            +  G+     T   I+         +CK+G +           K + + + +  R    
Sbjct: 724 DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783

Query: 353 -GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
            GV P   +YN LI+G+      + A  LF  M++ GC  DV +YN L++ + K+  + E
Sbjct: 784 LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
              LY +M+    KP  +T+N +   L + + +++AL LF ++     +    TY   +D
Sbjct: 844 LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           GL KSG + EA ELF  + D     N   YN LI+G
Sbjct: 904 GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING 939



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 185/360 (51%), Gaps = 7/360 (1%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           V   +  + + G  PD+ T +IL+N  CK G +   F +L  + +    PN  T+ +LI 
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           GL   +R+ +A  LF         P  +TY   I+   ++G +  AL  FE+M       
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG--- 469

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
                PN V  N  +  L + G + +AK +F ++K   + PD VTY  +++ +  A   +
Sbjct: 470 ---IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  L  +M +   +PD++  + +++ L K G++D+A ++   +    + P   TYNTLI
Sbjct: 527 EAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLI 586

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G     ++  A +LF SM  NGC  + +++NT+++  CKN +V+ AL +  +M +    
Sbjct: 587 AGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCM 646

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P V+T+NT+  GL    +V  A+ LF +M++  +  D  T    + G+ K+G + +A ++
Sbjct: 647 PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAFKI 705



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 209/475 (44%), Gaps = 77/475 (16%)

Query: 104  PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT-----HSILIN-------- 150
            PP   +FN +  CL KN   D  L +  ++ +    PD+ T     H ++I         
Sbjct: 611  PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIW 670

Query: 151  ----------------CFCKMGRVSHGFV-------------------------VLGRIL 169
                            C    G V +G +                         ++G IL
Sbjct: 671  LFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGIL 730

Query: 170  RSCFTPNAVTFTS----------------LIKGLCAESRIMEAAALFTKH-RVFACEPDV 212
                T   + F                  +IK LC   + + A ++F +  +    +P +
Sbjct: 731  TQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTL 790

Query: 213  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             +YN LI G     +  +A NLF EM N        C P+  TYN ++D   K G +++ 
Sbjct: 791  ESYNFLIEGFLGVHNDEMAWNLFTEMKNAG------CAPDVFTYNLLLDAHGKSGKINEL 844

Query: 273  KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             EL+ +M   +  P+ +T+  +I     +N  ++A  LF +++     P   T+  ++D 
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 333  LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            L K+G++++A  L E M+  G  PN   YN LI+G+  T  ++ A +LF  M   G   D
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 393  VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
            + SY +L+   C+   V++AL  + ++   G+    + YN +  GL   H++E AL L+D
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024

Query: 453  EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            EM+   +  D +TYN+ I  L  +G V +A +L+  ++    E N+ +YN LI G
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRG 1079



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 199/436 (45%), Gaps = 34/436 (7%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++N L   L K       + LF  +   G  P+  T + +++C CK   V     +
Sbjct: 577  PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKM 636

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L ++      P+ +TF ++I GL  E R+ +A  LF + +     PD  T  TL+ G+ +
Sbjct: 637  LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVK 695

Query: 225  TGHTIVALNLFEEMANGNGEF-------------------------------GVVCKPNT 253
             G    A  + E+  +  G +                               G VCK  +
Sbjct: 696  NGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGS 755

Query: 254  VTYNTIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            V    II  LCK      A+ +F++   E  + P + +Y  +I GF   ++   A  LF 
Sbjct: 756  VLM-PIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFT 814

Query: 313  EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            EM + G  PDV T+++++D   K+GK+++   L E MI     PNT T+N +I     ++
Sbjct: 815  EMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSN 874

Query: 373  KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
             +D A  LF  + S        +Y  L++   K+  +EEA  L+ EM+  G +P    YN
Sbjct: 875  SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934

Query: 433  TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
             L  G  +   V  A +LF  M R  +  D  +Y + +  LC++G V +AL  F  ++ +
Sbjct: 935  ILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994

Query: 493  KYELNIVSYNCLIDGL 508
               L+ ++YN +IDGL
Sbjct: 995  GLYLDSIAYNLMIDGL 1010



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 187/421 (44%), Gaps = 41/421 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ I    L +    D    + KR+   G  PD+ T+++LI+  C  G++     +
Sbjct: 262 PNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMEL 321

Query: 165 ----------------------------LGRILR-------SCFTPNAVTFTSLIKGLCA 189
                                       LGR+           + P+ +TFT L+  LC 
Sbjct: 322 FVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCK 381

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
              I EA  L    R     P++ TYNTLI+GL R      AL+LF  M       GVV 
Sbjct: 382 AGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET----LGVV- 436

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P   TY   ID   K G  DKA E F KMK   I P++V   + +          EAK 
Sbjct: 437 -PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F  +   G+ PD VT++++M    K G++D+A  LL  M      P+    N+LI+   
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++D A K+F  ++       VV+YNTLI    K   V+ A+ L++ M   G  P  +
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           T+NT+   L +  +V+ ALK+  +M   +   D  T+N  I GL     V +A+ LF  +
Sbjct: 616 TFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675

Query: 490 R 490
           +
Sbjct: 676 K 676



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 175/330 (53%), Gaps = 6/330 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + S+N L        + +   +LF  + +AG  PD++T+++L++   K G+++  F +
Sbjct: 788  PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++ S   PN +T   +I  L   + + +A  LF         P   TY  L++GL +
Sbjct: 848  YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK 907

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            +G    A  LFEEM     ++G  C+PN   YN +I+G  K G V+ A ELF +M  E I
Sbjct: 908  SGRLEEAKELFEEMV----DYG--CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             PD+ +YTS++   C A   ++A   F ++   G+  D + +++++D L ++ ++++A  
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L + M  RG+NP+ +TYN+LI    +   ++ A KL+  ++  G   +V +YN LI  Y 
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             + + + A ++Y  M+  G  P   T+  L
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 7/351 (1%)

Query: 117  LAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
            L K+K      S+F R     G+ P + +++ LI  F  +      + +   +  +   P
Sbjct: 764  LCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823

Query: 176  NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
            +  T+  L+       +I E   L+ +    +C+P+  T+N +I  L ++     AL+LF
Sbjct: 824  DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLF 883

Query: 236  EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
             ++ +G+        P   TY  ++DGL K G +++AKELF +M D    P+   Y  +I
Sbjct: 884  YDLVSGD------FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937

Query: 296  RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
             GF    D N A  LF  M+ +G++PD+ +++ ++  LC+ G++D A    E +   G+ 
Sbjct: 938  NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997

Query: 356  PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
             ++  YN +IDG   + +I+ A  L+  M+S G   D+ +YN+LI        VE+A  L
Sbjct: 998  LDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057

Query: 416  YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            Y E+   G++P V TYN L  G       + A  ++  M     + +T T+
Sbjct: 1058 YEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 146/297 (49%), Gaps = 6/297 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P V ++N+L     K+   + +  L++++  +   P+  TH+I+I    K   +     +
Sbjct: 823  PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               ++   F+P   T+  L+ GL    R+ EA  LF +   + C P+   YN LING  +
Sbjct: 883  FYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGK 942

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            TG    A  LF+ M           +P+  +Y +++  LC+ G VD A   F K+K   +
Sbjct: 943  TGDVNTACELFKRMVREG------IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              D + Y  +I G   ++   EA  L+ EM  +G+ PD+ T++ ++  L   G +++A +
Sbjct: 997  YLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGK 1056

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            L E + + G+ PN +TYN LI GY ++   D A  ++  M   GC  +  ++  L N
Sbjct: 1057 LYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 9/285 (3%)

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G  +V  NL +           + K +  TY  I  GL   G + +    F KM++  
Sbjct: 139 RVGDMVVVFNLMQNQ---------IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            + +  +Y  +I     +    EA  ++  M+ +G++P + TFS +M    K    +   
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVK 249

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LLE M   G+ PN YTY   I       +ID A ++   ME +GC  DVV+Y  LI+  
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C    +++A+ L+ +M +   KP  VTY T+     +   + R  + + EM  +  A D 
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            T+   ++ LCK+G + EA  L   +R      N+ +YN LI GL
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 178/361 (49%), Gaps = 6/361 (1%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           + +  L  AG+ P+    ++L+    + G+++    V   +LR    P  VTF +L+ G+
Sbjct: 228 AFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGM 287

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C  S +  A AL          PDV+TY   I GLC+TG    A+ +FEEM     E G+
Sbjct: 288 CKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC----ERGL 343

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              PNTV   T+ID  CKEG V    EL  +M    +  D+V Y +++ GFC   D   A
Sbjct: 344 --NPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAA 401

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +  EM   G++PD VT++ ++D  CK G++D A  + + M   GV  +  TY  LI G
Sbjct: 402 NDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISG 461

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                +   A ++   M   G   D  +Y  +I+ +CKN DV+       EM +KG  P 
Sbjct: 462 LSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPG 521

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +VTYN +  G   + Q++ A  L + M    V  +  TYN  +DG CK G V +  EL  
Sbjct: 522 IVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS 581

Query: 488 A 488
           A
Sbjct: 582 A 582



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 10/343 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD MLR     P V +FN L   + K    +   +L   +  AG+ PD+YT+   I   
Sbjct: 264 VFDEMLR-RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGL 322

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           CK GR+     +   +      PN V  T+LI   C E  +     L  +      + D+
Sbjct: 323 CKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADL 382

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN L+NG CR      A ++ EEM           KP+ VTY T+IDG CKEG +D A
Sbjct: 383 VAYNALVNGFCRVRDMKAANDIVEEMRKDG------LKPDKVTYTTLIDGCCKEGELDTA 436

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            E+  +M DE +  D VTYT++I G   A    +A+R+  EMM+ G+QPD  T+++++D 
Sbjct: 437 MEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 496

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CKNG +    + L+ M  +G NP   TYN +++G+C   ++ +A  L  +M + G   +
Sbjct: 497 FCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPN 556

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            ++YN L++ +CK+  V +   L S   +KG+      Y +L 
Sbjct: 557 DITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLI 596



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 153/315 (48%), Gaps = 6/315 (1%)

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA A +         P+   +N L+  + R+G    A N+F+EM       GV  +P 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEML----RRGV--QPT 276

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VT+NT++ G+CK   ++ A  L   M    I PDV TY + I+G C      +A  +F 
Sbjct: 277 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 336

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM ++G+ P+ V  + ++D  CK G +     L   M  RGV  +   YN L++G+C   
Sbjct: 337 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 396

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A  +   M  +G   D V+Y TLI+  CK  +++ A+ +  EM  +G+    VTY 
Sbjct: 397 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 456

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  GL +  +   A ++  EM    +  D  TY   ID  CK+G V    +  + +++ 
Sbjct: 457 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 516

Query: 493 KYELNIVSYNCLIDG 507
                IV+YN +++G
Sbjct: 517 GKNPGIVTYNVVMNG 531



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 127/240 (52%)

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A   +L + D  + P+   +  ++R    +     A+ +F EM+ +GVQP VVTF+ 
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M  +CK   ++ A+ L  LM   G+ P+ YTY   I G C T +I  A ++F  M   G
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              + V   TLI+ +CK  DV   L L  EM ++G+K  +V YN L  G   +  ++ A 
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + +EMR++ +  D  TY   IDG CK G +  A+E+ + + D    L+ V+Y  LI GL
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 194/381 (50%), Gaps = 9/381 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           LS F  + S G+ PD+   + ++       R      V   +L+    P+ VT+ +L+  
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 187 LCAESRIMEAAALFTKH--RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
              E R  + A L  +   R   C P+  T+N +I GL R G    A  + E M      
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR----- 301

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
             +  K ++ TYN +I GL  +GFV KA +L L+M++E I P VVTY ++I G   +   
Sbjct: 302 --LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV 359

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A+  F+EM   G+QPDV+T++ +++  CK G + +A  L   +   G+ P   TYN L
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           IDGYC    ++ AR+L   M   GC+ DV +Y  L+        +  A   + EMLSKG+
Sbjct: 420 IDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           +P    YNT       +  + +A +L + M    +++DT TYN  IDGLCK+G + +A +
Sbjct: 480 QPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKD 539

Query: 485 LFRAIRDSKYELNIVSYNCLI 505
           L   +  +  + + ++Y CLI
Sbjct: 540 LQMKMVHNGLQPDCITYTCLI 560



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 202/439 (46%), Gaps = 42/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS--AGLFPDIYTHSILINCFCKMGRV---- 158
           P + ++N L     K    D V  L K + +  +G  P+  TH+++I    + G +    
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294

Query: 159 -------------------------SHGFVVLGRILR-----SCFTPNAVTFTSLIKGLC 188
                                    + GFV     L+         P  VT+ ++I GL 
Sbjct: 295 EMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
              ++  A   F + R    +PDV TYN+L+NG C+ G    AL LF ++ +        
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG------ 408

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P  +TYN +IDG C+ G +++A+ L  +M ++   PDV TYT +++G   A     A+
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             F EM+ +G+QPD   ++  +      G + KA RL E+M+  G++ +T TYN LIDG 
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C T  ++ A+ L + M  NG   D ++Y  LI+ +C+   + EA   + +M+S G+ P+ 
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSA 588

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VTY            +  A   F +M    V  +  TYN  I  LC++G    A   F  
Sbjct: 589 VTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHE 648

Query: 489 IRDSKYELNIVSYNCLIDG 507
           + +     N  +Y  LIDG
Sbjct: 649 MLERGLVPNKYTYTLLIDG 667



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 169/367 (46%), Gaps = 29/367 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L ++   +     F  + + GL PD+ T++ L+N +CK G +    ++
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G +  +   P  +T+  LI G C    + EA  L  +     C PDV TY  L+ G   
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460

Query: 225 TGHTIVALNLFEEMANGNGE---------------FGVVCKP--------------NTVT 255
                +A   F+EM +   +                G + K               +TVT
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +IDGLCK G ++ AK+L +KM    + PD +TYT +I   C      EA++ F +M+
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+ P  VT++V +   C+ G +  A      M+  GV PN  TYN LI   C T +  
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A + F  M   G + +  +Y  LI+  CK  + E+A+  Y EM   GI P  +T+  LF
Sbjct: 641 LAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700

Query: 436 LGLFEIH 442
            G  E H
Sbjct: 701 KGFDEGH 707


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 208/402 (51%), Gaps = 7/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
            +SF++L    A        L +F  +  AG    + + + L+N   + G +     V  
Sbjct: 94  AASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQ 153

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++  +   P+  T   + K  C + R+  AA    +      + ++  Y+ +++G CR G
Sbjct: 154 QMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIG 213

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD-ENIN 285
            T VA  L   +            PN VTY  ++ G CKEG +++A+++  ++K+ E I 
Sbjct: 214 QTEVARKLLHSLQVKG------LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIV 267

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            D V Y ++I G+C      +A R+  EM+D GVQ ++  ++ +++  CK G+M +  +L
Sbjct: 268 IDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKL 327

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L+   +RGVN + Y+YNTL+DGYC    +  A +    M  NG     ++YNTL+N +C 
Sbjct: 328 LQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCS 387

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
              +++AL L+  ML +G+ P  ++ +TL  G F+  + E+AL L+ E     +A +  T
Sbjct: 388 RGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVT 447

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            N  I+GLCK+  + EA ELF  +++     + ++Y  LIDG
Sbjct: 448 INTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDG 489



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 210/420 (50%), Gaps = 6/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL +FD M +   S   + S N L   L +     T +++F+++  AG  PD +T +I+
Sbjct: 112 DALYVFDEMGKA-GSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIM 170

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
              +C+ GRV+H    L  +       N V + +++ G C   +   A  L    +V   
Sbjct: 171 AKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGL 230

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V TY  L+ G C+ G    A  + +E+     E  V+   + V Y  +I+G C+ G 
Sbjct: 231 SPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKEN--EKIVI---DEVAYGALINGYCQRGR 285

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           ++ A  +  +M D  +  ++  Y ++I G+C      E ++L      +GV  D  +++ 
Sbjct: 286 MEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNT 345

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D  C+ G M KA    ++M+  G    T TYNTL++G+C    ID A KL+  M   G
Sbjct: 346 LVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRG 405

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + + +S +TL++ + K    E+AL+L+ E L++G+   VVT NT+  GL +  ++  A 
Sbjct: 406 VVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAE 465

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +LF  M+      D+ TY   IDG CK G +  A ++   + +  +  ++  +N  I GL
Sbjct: 466 ELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGL 525



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 207/426 (48%), Gaps = 32/426 (7%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L          D  L L+  +   G+ P+  + S L++ F K G+      +    
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKET 436

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L      N VT  ++I GLC   R+ EA  LF + + ++C  D  TY TLI+G C+ G  
Sbjct: 437 LARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDL 496

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  +  EM N     G V  P+   +N+ I GL       K  ++ ++M  + ++P+ 
Sbjct: 497 GRATQIRIEMEN----LGFV--PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNT 550

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY ++I G+C   + ++A  L+ EM+++G++P++   SV++    + GK+D+A+ +L+ 
Sbjct: 551 VTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQK 610

Query: 349 MI------------------------WRGVNPNT--YTYNTLIDGYCLTDKIDHARKLFV 382
           +                           G N  +    +N +I G C   ++  AR LF 
Sbjct: 611 LADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFE 670

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ++  G + D  +Y++LI+    +  ++ A  L  EMLS  + P +VTYN+L  GL +  
Sbjct: 671 DLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSC 730

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
            V RA+ LF++++   ++ +  TYN  IDG CK G   EA +L + +     +  + +Y 
Sbjct: 731 NVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYT 790

Query: 503 CLIDGL 508
            LI GL
Sbjct: 791 ILIHGL 796



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 184/398 (46%), Gaps = 7/398 (1%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLN-SAGLFPDIYTHSILINCFCK 154
           + L++    P V ++ +L     K    +    + K +  +  +  D   +  LIN +C+
Sbjct: 223 HSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQ 282

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
            GR+     V   ++ +    N   + ++I G C   R+ E   L   +       D ++
Sbjct: 283 RGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYS 342

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YNTL++G CR G    A    + M   NG  G      T+TYNT+++G C  G +D A +
Sbjct: 343 YNTLVDGYCRKGFMTKAFETCDMMVR-NGFTGT-----TLTYNTLLNGFCSRGAIDDALK 396

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L+  M    + P+ ++ ++++ GF  A    +A  L+ E + +G+  +VVT + +++ LC
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           KN +M +A  L   M       ++ TY TLIDGYC    +  A ++ + ME+ G +  V 
Sbjct: 457 KNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVE 516

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            +N+ I      K   +   +  EM +KG+ P  VTY  L  G  +   +  A  L+ EM
Sbjct: 517 MFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEM 576

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
               +  + +  +  +    + G V EA  + + + D+
Sbjct: 577 VEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADT 614



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 173/409 (42%), Gaps = 67/409 (16%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH------ 160
           V + N +   L KN+       LF R+       D  T+  LI+ +CK+G +        
Sbjct: 445 VVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRI 504

Query: 161 -----GFVVLGRILRSCFT------------------------PNAVTFTSLIKGLCAES 191
                GFV    +  S  T                        PN VT+ +LI G C E 
Sbjct: 505 EMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEG 564

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA-------------------- 231
            + +A  L+ +      +P++F  + L++   R G    A                    
Sbjct: 565 NLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSAST 624

Query: 232 ------LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                  ++ E +A GN +         + +N +I GLCK G V  A+ LF  +K +   
Sbjct: 625 LNIGKVAHIIESLAGGNHQ------SAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFI 678

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           PD  TY+S+I G   +   + A  L  EM+   + P++VT++ ++  LCK+  + +A  L
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
              +  +G++PN  TYNTLIDG+C       A KL   M   G    V +Y  LI+  C 
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCT 798

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
              +EEA+ L  +M+   + P  +TY TL  G      ++   KL++EM
Sbjct: 799 QGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 162/325 (49%), Gaps = 16/325 (4%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP  V+   ++ G   +   +D  +  F+ +   GL P+++  S+L++CF + G+V    
Sbjct: 547 SPNTVTYGALIAGWCKEGNLHDACILYFEMVEK-GLKPNLFICSVLVSCFYREGKVDEAN 605

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           +VL ++  +    +    T  I  +   + I+E+ A          +     +N +I GL
Sbjct: 606 LVLQKLADTDMIQDCSASTLNIGKV---AHIIESLAGGNH------QSAKIMWNIVILGL 656

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+ G    A NLFE++       G +  P+  TY+++I G    G +D A  L  +M   
Sbjct: 657 CKLGRVADARNLFEDLKVK----GFI--PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P++VTY S+I G C + + + A  LF ++  +G+ P+ +T++ ++D  CK+G   +A
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
            +L + MI  G+ P  +TY  LI G C    ++ A KL   M  N    + ++Y TLI  
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPT 427
           Y +  +++    LY+EM   G+ P 
Sbjct: 831 YARCGNMKAITKLYNEMHICGLLPA 855



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 6/229 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +NI+   L K        +LF+ L   G  PD +T+S LI+     G +   F +   +L
Sbjct: 649 WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEML 708

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +  TPN VT+ SLI GLC    +  A +LF K +     P+  TYNTLI+G C+ G+T 
Sbjct: 709 SARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTT 768

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L ++M     + G+  +P   TY  +I GLC +G++++A +L  +M + N++P+ +
Sbjct: 769 EAFKLKQKMI----KEGI--QPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFI 822

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           TY ++I+G+    +     +L+ EM   G+ P   T  V   E   N K
Sbjct: 823 TYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWTGHVKQAEPVVNSK 871



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 6/215 (2%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +I+I   CK+GRV+    +   +    F P+  T++SLI G  A   I  A  L  +   
Sbjct: 650 NIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLS 709

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P++ TYN+LI GLC++ +   A++LF ++ +          PN +TYNT+IDG CK
Sbjct: 710 ARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKG------ISPNAITYNTLIDGHCK 763

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G   +A +L  KM  E I P V TYT +I G C      EA +L  +M++  V P+ +T
Sbjct: 764 DGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFIT 823

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           +  ++    + G M   ++L   M   G+ P  +T
Sbjct: 824 YWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/158 (19%), Positives = 67/158 (42%)

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           +++  + +  +++ L+  +    ++  A  +F  M   G    + S N L+N   +  D+
Sbjct: 86  VYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDI 145

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
             A++++ +M   G  P   T   +        +V  A     EM    +  +   Y+  
Sbjct: 146 GTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAV 205

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +DG C+ G    A +L  +++      N+V+Y  L+ G
Sbjct: 206 MDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKG 243



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/127 (20%), Positives = 60/127 (47%), Gaps = 1/127 (0%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A+ +F+ +     SP  ++ +N L     K+ +      L +++   G+ P ++T++I
Sbjct: 733 SRAVSLFNKLQSKGISPNAIT-YNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTI 791

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  C  G +     +L +++ +   PN +T+ +LI+G      +     L+ +  +  
Sbjct: 792 LIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICG 851

Query: 208 CEPDVFT 214
             P  +T
Sbjct: 852 LLPANWT 858


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 216/421 (51%), Gaps = 8/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F+  L ++ S P V ++N +         +D   SL +R    G  P +  ++ 
Sbjct: 325 DEAVELFEE-LDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNC 383

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++ C  + G+V     +    +R    PN  T+  LI  LC    +  A  +    +   
Sbjct: 384 ILTCLGRKGKVEEALRIHDE-MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAG 442

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P++ T N +I+ LC+      A ++F  + +       VC P++ T+ ++IDGL + G
Sbjct: 443 LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK------VCSPDSRTFCSLIDGLGRRG 496

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A  L+ KM D +  P+VV YTS+I+ F       +  +++ EM+ +G  PD++  +
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLN 556

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             MD + K G+++K   L E +  +G+ P+  +Y+ LI G           KLF  M+  
Sbjct: 557 SYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQ 616

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   DV++YNT+I+ +CK+  V++A  L  EM +KG++PTVVTY ++  GL +I +++ A
Sbjct: 617 GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             LF+E +   V  +   Y++ IDG  K G + EA  +   +       N  ++NCL+D 
Sbjct: 677 YMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736

Query: 508 L 508
           L
Sbjct: 737 L 737



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 223/490 (45%), Gaps = 78/490 (15%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL I D M     + P ++++NIL   L K    +  L +   +  AGLFP+I T +I+
Sbjct: 396 EALRIHDEM--RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIM 453

Query: 149 INCFCKM-----------------------------------GRVSHGFVVLGRILRSCF 173
           I+  CK                                    GRV   + +  ++L S  
Sbjct: 454 IDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQ 513

Query: 174 TPNAVTFTSLIKGL--CAE---------------------------------SRIMEAAA 198
            PN V +TSLI+    C                                     + +  A
Sbjct: 514 IPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRA 573

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           LF + +     PDV +Y+ LI+GL + G +     LF EM        V+       YNT
Sbjct: 574 LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVL------AYNT 627

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +IDG CK G VDKA +L  +MK + + P VVTY SV+ G    +  +EA  LF E    G
Sbjct: 628 VIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIG 687

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           V  +VV +S ++D   K G++D+A  +LE ++ +G+ PN+YT+N L+D     ++ID A+
Sbjct: 688 VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ 747

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             F +M++  C  + ++Y+ +IN  C  +   +A   + EM  +G+KP  +TY T+  GL
Sbjct: 748 VCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGL 807

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +   V  A  LFD  + +    D+  YN  I+GL  +   ++A  +F   R     +N 
Sbjct: 808 AKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNS 867

Query: 499 VSYNCLIDGL 508
            +   L+D L
Sbjct: 868 KTCVVLLDAL 877



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 213/421 (50%), Gaps = 8/421 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+  L +F  M  +      V  F  L    A+    D  LSL   + S     D+  ++
Sbjct: 219 PDPMLTLFHQMQEI-GYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYN 277

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           + I+CF K+G+V   +     +      P+ VT+T+LI  LC   R+ EA  LF +  + 
Sbjct: 278 VCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLN 337

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P V+ YNT+I G    G    A +L E            C P+ + YN I+  L ++
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG------CIPSVIAYNCILTCLGRK 391

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V++A  +  +M+ ++  P++ TY  +I   C A +   A ++   M + G+ P+++T 
Sbjct: 392 GKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTV 450

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           ++++D LCK  K+D+A  +   +  +  +P++ T+ +LIDG     ++D A  L+  M  
Sbjct: 451 NIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +  + +VV Y +LI  + K    E+   +Y EM+ +G  P ++  N+    +F+  +VE+
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              LF+E++   +  D  +Y+  I GL K+GF  E  +LF  +++    L++++YN +ID
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVID 630

Query: 507 G 507
           G
Sbjct: 631 G 631



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 188/407 (46%), Gaps = 13/407 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPV---SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  +++ ML     P  V   S     F C  K   +     ++K +   G  PD+  
Sbjct: 499 DDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH----KIYKEMVHRGCSPDLML 554

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +  ++C  K G V  G  +   I      P+  +++ LI GL       E   LF + +
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                 DV  YNT+I+G C++G    A  L EEM           +P  VTY +++DGL 
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG------LQPTVVTYGSVVDGLA 668

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K   +D+A  LF + K   ++ +VV Y+S+I GF      +EA  +  E+M +G+ P+  
Sbjct: 669 KIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSY 728

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++D L K  ++D+A    + M     +PN  TY+ +I+G C+  K + A   +  M
Sbjct: 729 TWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEM 788

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  G   + ++Y T+I    K  +V EA  L+    + G  P    YN +  GL   ++ 
Sbjct: 789 QKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKA 848

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             A  +F+E R      ++ T    +D L K+  + +A  +   +R+
Sbjct: 849 MDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLRE 895



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 1/259 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P    Y T+I  L      D    LF +M++     +V  +T+++R F      + A  
Sbjct: 200 RPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALS 259

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM       D+V ++V +D   K GK+D A +    M  +G+ P+  TY TLI   C
Sbjct: 260 LLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++D A +LF  ++ N  +  V +YNT+I  Y      +EA SL      KG  P+V+
Sbjct: 320 KARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVI 379

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            YN +   L    +VE AL++ DEMR++  A +  TYN  ID LCK+G +  AL++   +
Sbjct: 380 AYNCILTCLGRKGKVEEALRIHDEMRQD-AAPNLTTYNILIDMLCKAGELEAALKVQDTM 438

Query: 490 RDSKYELNIVSYNCLIDGL 508
           +++    NI++ N +ID L
Sbjct: 439 KEAGLFPNIMTVNIMIDRL 457


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 193/379 (50%), Gaps = 9/379 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           NI    L K+   D   S F+ L       +  +++ILIN FCK  R+     + G +  
Sbjct: 70  NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
               P+  T+ +LI GLC   R+ EA   + +           TYN L++G C+      
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189

Query: 231 ALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           A+ L  E+ A G    GVV    +  YN IID L K+G + +A+  F +M+ + + P  V
Sbjct: 190 AVELLNELVARG----GVV---TSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEV 242

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           T+T +I G C AN    AK +F   ++ G  P VV  S +MD  CK G +D+A R+ ELM
Sbjct: 243 TFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELM 302

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
             RG  PN  + N LI+G C   ++  AR++F  +       DVV+Y+T ++  C+   V
Sbjct: 303 TNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRV 362

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD-EMRRNHVAADTYTYNN 468
           ++A  +   ++ KG  P VV Y  L  GL  + +++ A K+F+ +MR    A + +T N 
Sbjct: 363 DQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNV 422

Query: 469 FIDGLCKSGFVLEALELFR 487
            ++G   +G + EA ELF+
Sbjct: 423 LVNGFGLAGRLDEARELFQ 441



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 174/348 (50%), Gaps = 8/348 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F  M +     P  S++N L G L + +        ++RL S+G      T++I
Sbjct: 118 DEAIQLFGEM-KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNI 176

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK  RV     +L  ++       +  +  +I  L  + +I EA   F +     
Sbjct: 177 LVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDG 236

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   T+  LI+GLC+      A  +F       G       P+ V  + ++DG CK G
Sbjct: 237 VRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGG------SPSVVICSCLMDGFCKYG 290

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD+A  +F  M +    P+ V+   +I G C A   ++A+ +F E++ +  +PDVVT+S
Sbjct: 291 GVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYS 350

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF-VSMES 386
             MD LC+  ++D+A ++L +++ +G  P+   Y  LI G C   ++D ARK+F V M +
Sbjct: 351 TFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRA 410

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            GC  +  + N L+N +     ++EA  L+   + +G++P   T++ +
Sbjct: 411 AGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 11/394 (2%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGL-FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
           CL      D  L LF  L S G   P      +L+    K GR      V+  +L     
Sbjct: 8   CLCHVGKLDEALELFHSLVSDGCGLP----ADLLVRELSKAGRAEECLKVVKLMLDRQQL 63

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
                    I  LC    I +A + F + + F    +  +YN LIN  C+T     A+ L
Sbjct: 64  RERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQL 123

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F EM          C P+T TYNT+I GLC+   + +A++ + ++         +TY  +
Sbjct: 124 FGEMKAPG------CAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNIL 177

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           + GFC A+   EA  L  E++ +G       ++ I+D L K GK+ +A      M   GV
Sbjct: 178 VDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGV 237

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P   T+  LIDG C  +++  A+++F S   +G    VV  + L++ +CK   V+EA  
Sbjct: 238 RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWR 297

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           ++  M ++G  P  V+ N L  GL +  ++ +A ++F+E+ +     D  TY+ F+DGLC
Sbjct: 298 IFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLC 357

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++  V +A ++   + D     ++V Y  LI GL
Sbjct: 358 RAHRVDQARQVLCMLVDKGGTPDVVMYTALISGL 391



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 7/369 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+NIL     K K  D  + LF  + + G  P   T++ LI   C++ R+        R+
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L S    + +T+  L+ G C   R+ EA  L  +            YN +I+ L + G  
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A   F  M       GV  +P  VT+  +IDGLCK   V +AKE+F    +   +P V
Sbjct: 223 HEAELFFNRMEKD----GV--RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSV 276

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           V  + ++ GFC     +EA R+F  M ++G  P+ V+ +++++ LCK  ++ +A  + E 
Sbjct: 277 VICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEE 336

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           ++ R   P+  TY+T +DG C   ++D AR++   +   G   DVV Y  LI+  C    
Sbjct: 337 VVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGR 396

Query: 409 VEEALSLYS-EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++EA  ++  +M + G  P   T N L  G     +++ A +LF       V  D  T++
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456

Query: 468 NFIDGLCKS 476
              +   K+
Sbjct: 457 AMANNTAKT 465



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 7/269 (2%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           + +N +   L K          F R+   G+ P   T ++LI+  CK  RV+    +   
Sbjct: 207 APYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFS 266

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            L S  +P+ V  + L+ G C    + EA  +F       C P+  + N LINGLC+   
Sbjct: 267 YLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKR 326

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  +FEE+           KP+ VTY+T +DGLC+   VD+A+++   + D+   PD
Sbjct: 327 LSQAREVFEEVVKRQA------KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPD 380

Query: 288 VVTYTSVIRGFCYANDWNEAKRLF-IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           VV YT++I G C     +EA+++F ++M   G  P+  T +V+++     G++D+A  L 
Sbjct: 381 VVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELF 440

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           +  + RGV P+  T++ + +    T+  D
Sbjct: 441 QRFVERGVQPDCRTFSAMANNTAKTEGWD 469



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 8/254 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA   F+ M +    P  V+ F +L   L K         +F     +G  P +   S 
Sbjct: 223 HEAELFFNRMEKDGVRPQEVT-FTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSC 281

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ FCK G V   + +   +     TPN V+   LI GLC   R+ +A  +F +     
Sbjct: 282 LMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDV TY+T ++GLCR      A  +   + +  G       P+ V Y  +I GLC  G
Sbjct: 342 AKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGG------TPDVVMYTALISGLCSLG 395

Query: 268 FVDKAKELF-LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            +D+A+++F + M+     P+  T   ++ GF  A   +EA+ LF   +++GVQPD  TF
Sbjct: 396 RLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTF 455

Query: 327 SVIMDELCKNGKMD 340
           S + +   K    D
Sbjct: 456 SAMANNTAKTEGWD 469


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 218/412 (52%), Gaps = 8/412 (1%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+  H   P   S+NIL   L         L L   + + GL PD+ T++IL   F  +G
Sbjct: 306 MMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLG 365

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            ++  + ++ ++L     PN VT+T LI G C    + EA  L+ +      +  + +  
Sbjct: 366 LINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISST 425

Query: 217 TLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
            L+  LC++    VA  LF EM ANG        +P+ +TY+T+I GLCK+G V +A  L
Sbjct: 426 VLLGSLCKSRQVDVAFKLFCEMEANG-------LRPDLITYSTLIHGLCKQGEVQQAILL 478

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           + KM    I P+ + + +++ G C     ++A+  F  ++   +  D++ +++++D   K
Sbjct: 479 YEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIK 538

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G   +A +L + +  +G++P   T+N+L+ G+C+  K+  AR+L  +++ +G   + V+
Sbjct: 539 RGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVT 598

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y TL+N YC+  +++  L L SEM +K I PT +TY  +  GL +  +++ + +L ++M 
Sbjct: 599 YTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMD 658

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +  D  +YN  I   CK+  + +A +L+  +     E   V+YN LI+G
Sbjct: 659 AVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILING 710



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 208/421 (49%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A  I   ML   P+P  V+ + +L     +  + +  L L+K + S G    I + ++
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVT-YTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+   CK  +V   F +   +  +   P+ +T+++LI GLC +  + +A  L+ K     
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+   +  ++ GLC  G    A   F+ +   N    ++       YN +IDG  K G
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII------LYNIMIDGYIKRG 540

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +A +L+ ++ ++ I+P +VT+ S++ GFC     ++A+RL   +   G++P+ VT++
Sbjct: 541 NTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYT 600

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +M+  C+ G M     LL  M  + + P   TY  +I G C   K+  + +L   M++ 
Sbjct: 601 TLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAV 660

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D VSYNT+I  +CK +D+ +A  LY +ML   ++PT VTYN L  G      ++ A
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L   ++   V  + Y Y   I   C  G V +A+  FR + +  +E++I  Y+ +I  
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780

Query: 508 L 508
           L
Sbjct: 781 L 781



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 199/411 (48%), Gaps = 6/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +++  +P    + +I+   L +   +   +  F+        P + + + +++ +CK+G 
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V         +L+    P+A ++  LI GLC    + EA  L         EPD+ TYN 
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L  G    G    A N+ ++M            PN VTY  +I G C+ G V++A +L+ 
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGP------NPNLVTYTVLICGHCQIGNVEEALKLYK 410

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M        +++ T ++   C +   + A +LF EM   G++PD++T+S ++  LCK G
Sbjct: 411 EMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQG 470

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++ +A  L E M    + PN+  +  ++ G C   KI  AR  F  + ++    D++ YN
Sbjct: 471 EVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYN 530

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            +I+ Y K  +  EA+ LY ++  KGI PT+VT+N+L  G     ++ +A +L D ++ +
Sbjct: 531 IMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLH 590

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +  TY   ++  C+ G +   LEL   ++        ++Y  +I GL
Sbjct: 591 GLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGL 641



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 196/398 (49%), Gaps = 7/398 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+  H     + S  +L G L K++  D    LF  + + GL PD+ T+S L
Sbjct: 404 EALKLYKEMIS-HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL 462

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  CK G V    ++  ++  +   PN++   +++ GLC + +I +A   F        
Sbjct: 463 IHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNL 522

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D+  YN +I+G  + G+T  A+ L++++    GE G+   P  VT+N+++ G C    
Sbjct: 523 SLDIILYNIMIDGYIKRGNTREAVKLYKQL----GEKGI--SPTIVTFNSLMYGFCINRK 576

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A+ L   +K   + P+ VTYT+++  +C   +      L  EM  + + P  +T++V
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LCK  K+ ++ +LLE M   G+ P+  +YNT+I  +C    +  A +L+  M  + 
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                V+YN LIN +C   D+++A +L   + ++ +      Y T+         V++A+
Sbjct: 697 LEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAV 756

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             F +M           Y+  I  LCK   V EA   F
Sbjct: 757 VYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 208/420 (49%), Gaps = 27/420 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NE   + D ML    S    S   +L G              F+  +S+ +  D+     
Sbjct: 143 NELRLVLDQMLLHEGSGSAPSLCELLLGS-------------FRSWDSSNVVWDM----- 184

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L   + +   V     VL ++    F  +  T+ SL+  L   S IM    ++ + +V  
Sbjct: 185 LACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL-RHSNIM--WDVYNEIKVSG 241

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
                +T + +++GLCR      A+  F++      EF    +P+ V++NTI+   CK G
Sbjct: 242 TPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGK--EF----QPSVVSFNTIMSRYCKLG 295

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
           FVD AK  F  M    + PD  +Y  +I G C A    EA  L  +M + G++PD+VT++
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++       G ++ A  +++ M+ +G NPN  TY  LI G+C    ++ A KL+  M S+
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G    ++S   L+   CK++ V+ A  L+ EM + G++P ++TY+TL  GL +  +V++A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + L+++M  N +  ++  +   + GLC+ G + +A   F  +  S   L+I+ YN +IDG
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 174/380 (45%), Gaps = 14/380 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           QG++      +A+ +++ M      P  +    IL G   K K     +  F  L ++ L
Sbjct: 469 QGEVQ-----QAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARM-YFDYLITSNL 522

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             DI  ++I+I+ + K G       +  ++     +P  VTF SL+ G C   ++ +A  
Sbjct: 523 SLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARR 582

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYN 257
           L    ++   EP+  TY TL+N  C  G+    L L  EM A   G       P  +TY 
Sbjct: 583 LLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG-------PTHITYT 635

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I GLCK+  + ++ +L   M    + PD V+Y ++I+ FC A D  +A +L+ +M+  
Sbjct: 636 VVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLH 695

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            ++P  VT++++++  C  G +  A  LL  +  R VN N Y Y T+I  +C    +D A
Sbjct: 696 NLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKA 755

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
              F  M   G    +  Y+ +I   CK   V EA   +  MLS G+ P    +  L   
Sbjct: 756 VVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA 815

Query: 438 LFEIHQVERALKLFDEMRRN 457
             +   +    +L  EM ++
Sbjct: 816 FHQCGHLNSEFELLAEMIKS 835



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 14/325 (4%)

Query: 188 CAESR---IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           CA SR   + +A  +  K +       + TYN+L+  L    H+ +  +++ E+      
Sbjct: 187 CAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL---RHSNIMWDVYNEIK----- 238

Query: 245 FGVVCKPNT-VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
             V   P +  T + ++DGLC++     A   F   + +   P VV++ +++  +C    
Sbjct: 239 --VSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            + AK  F  M+  G+ PD  ++++++  LC  G M +A  L   M   G+ P+  TYN 
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L  G+ L   I+ A  +   M   G   ++V+Y  LI  +C+  +VEEAL LY EM+S G
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHG 416

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            + ++++   L   L +  QV+ A KLF EM  N +  D  TY+  I GLCK G V +A+
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAI 476

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            L+  +  ++   N + +  ++ GL
Sbjct: 477 LLYEKMCSNRIIPNSLIHGAILMGL 501



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 7/336 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A   FDY++  + S   +  +NI+     K  +    + L+K+L   G+ P I T + 
Sbjct: 508 SQARMYFDYLITSNLSLDIIL-YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNS 566

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+  FC   ++S    +L  I      PNAVT+T+L+   C E  +     L ++ +  A
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKA 626

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   TY  +I GLC+      +  L E+M        V   P+ V+YNTII   CK  
Sbjct: 627 IGPTHITYTVVIKGLCKQWKLQESCQLLEDMD------AVGLTPDQVSYNTIIQAFCKAR 680

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + KA +L+ KM   N+ P  VTY  +I GFC   D  +A  L + + ++ V  +   ++
Sbjct: 681 DMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYT 740

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I+   C  G +DKA      M+ +G   +   Y+ +I   C    +  A+  F  M S+
Sbjct: 741 TIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSD 800

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           G   D   +  L+N + +   +     L +EM+  G
Sbjct: 801 GVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 6/288 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L      N+       L   +   GL P+  T++ L+N +C+ G +     +
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P  +T+T +IKGLC + ++ E+  L          PD  +YNT+I   C+
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L+++M   N E      P +VTYN +I+G C  G +  A  L + +++  +
Sbjct: 679 ARDMRKAFQLYDKMLLHNLE------PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           N +   YT++I+  C   D ++A   F +M+++G +  +  +S ++  LCK   + +A  
Sbjct: 733 NLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKY 792

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
              +M+  GV P+   +  L++ +     ++   +L   M  +G +++
Sbjct: 793 FFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWLYE 840


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 216/429 (50%), Gaps = 12/429 (2%)

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +G GD    TP  AL + D M      P  V  +N L     +    D    +   +  A
Sbjct: 180 AGFGD----TP-AALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEA 233

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+ P++ T++  I  +C+   V   F +   ++R+    + VT ++L+ GLC + R  EA
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEA 293

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
            ALF +       P+  TY TLI+ L + G     L+L  EM +     GVV   + VTY
Sbjct: 294 YALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLVTY 347

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
             ++D L K+G  D+ K+       +N++P+ VTYT +I   C A++ +EA+++ +EM +
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + + P+VVTFS +++   K G +DKA+    +M  RG+NPN  TY TLIDG+      D 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A +++  M   G   +    ++L+N   +N  +EEA++L+ +    G+    V Y TL  
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GLF+   +  A K   E+   ++  D   YN FI+ LC  G   EA      +R+   + 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587

Query: 497 NIVSYNCLI 505
           +  +YN +I
Sbjct: 588 DQSTYNTMI 596



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 6/395 (1%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L +N   +  ++LFK  + +GL  D   ++ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+AV +   I  LC   +  EA +  T+ R    +PD  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM   +       KPN +TYNT++ GL   G V+KAK L  +M     +P  +T+ 
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            V++    +   +    +   MM+ G+  D+  ++ ++  LC +G   KA+ +LE M+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+T T+N LI G+C +  +D+A   +  M       ++ ++NTL+        + EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            ++  EM   G++P  +TY+ L  G  +      A++L+ EM          TYN  I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             K+G + +A ELF+ ++         +Y+ L+ G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 190/429 (44%), Gaps = 29/429 (6%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L K    D V    +   S  L P+  T+++LI+  CK   V     VL  +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                +PN VTF+S+I G      + +A       +     P+V TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 229 IVALNLFEEM---------------ANG---NGEF-----------GVVCKPNTVTYNTI 259
             AL ++ +M                NG   NG+            G     + V Y T+
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGL K G +  A +   ++ D N+ PD V Y   I   C    + EAK    EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +PD  T++ ++   C+ G+  KA +LL  M    + PN  TYNTL+ G   T  ++ A+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M S G     +++  ++    +++ ++  L ++  M++ G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                 +A  + +EM  + +A DT T+N  I G CKS  +  A   +  +       NI 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 500 SYNCLIDGL 508
           ++N L+ GL
Sbjct: 766 TFNTLLGGL 774



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 182/403 (45%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F+ +     K    D      + +   G+ P++ T+  LI+ F K         V
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L      N     SL+ GL    +I EA ALF          D   Y TLI+GL +
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A    +E+ + N        P+ V YN  I+ LC  G   +AK    +M++  +
Sbjct: 532 AGDMPTAFKFGQELMDRN------MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY ++I   C   +  +A +L  EM    ++P+++T++ ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+  G +P++ T+  ++     + ++D    +   M + G   D+  YNTL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +    +A  +  EML  GI P  +T+N L LG  +   ++ A   + +M   +++ +  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T+N  + GL   G + EA  +   +  S  E N ++Y+ L  G
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATG 808



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 198/463 (42%), Gaps = 63/463 (13%)

Query: 47  TTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPP 106
            T+     ++R    D ASL   L   C+      + L+ P  AL        +  S P 
Sbjct: 57  ATSGLAAAAIRFRPADPASLNALLYSHCR------LRLLRPAIAL--------LRSSRPT 102

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
             ++NIL   L+ + H   VL+                        CK G    G     
Sbjct: 103 TVAYNILLAALSDHAHAPAVLAEM----------------------CKRGVPFDG----- 135

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL-INGLCRT 225
                      VT  +L+ GLC   ++  AAAL  +       P + +  TL +  +   
Sbjct: 136 -----------VTVNTLLAGLCRNGQVDAAAALADRAG--GITPWMSSAGTLSLLDIAGF 182

Query: 226 GHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           G T  AL++ + M A G          + V YNT++ G C+ G VD A+ +   MK+  +
Sbjct: 183 GDTPAALSVADRMTAQG-------LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+V TYT  I  +C      EA  L+  M+  GV  DVVT S ++  LC++G+  +A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   G  PN  TY TLID      +      L   M S G + D+V+Y  L++W  
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    +E        LS  + P  VTY  L   L + H V+ A ++  EM    ++ +  
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVV 415

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T+++ I+G  K G + +A E  R +++     N+V+Y  LIDG
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 6/383 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+   CL     +    S    + + GL PD  T++ +I   C+ G  +    +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  S   PN +T+ +L+ GL     + +A  L  +       P   T+  ++    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +    V L++ E M N           +   YNT++  LC  G   KA  +  +M    I
Sbjct: 672 SRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+ ++I G C ++  + A   + +M+ Q + P++ TF+ ++  L   G++ +A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M   G+ PN  TY+ L  G+        A +L+  M   G +  V +YN LI+ + 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L+ +M  +G+ PT  TY+ L  G   I       K   +M+    +    
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 465 TYNNFIDGLCKSGFVLEALELFR 487
           T +       K G   +A  L +
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLK 928



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 149/341 (43%), Gaps = 24/341 (7%)

Query: 173 FTP-NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
           F P +  +  +L+   C    +  A AL    R     P    YN L+  L    H   A
Sbjct: 68  FRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---A 119

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
             +  EM      F      + VT NT++ GLC+ G VD A  L  +     I P + + 
Sbjct: 120 PAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQVDAAAALADRAG--GITPWMSSA 171

Query: 292 TSV----IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            ++    I GF    D   A  +   M  QG+  DVV ++ ++   C+ G++D A  +L+
Sbjct: 172 GTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           +M   GV+PN  TY   I  YC T  ++ A  L+  M  NG + DVV+ + L+   C++ 
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
              EA +L+ EM   G  P  VTY TL   L +  + +  L L  EM    V  D  TY 
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +D L K G   E  +  R         N V+Y  LID L
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 7/289 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+    SP  ++   +L  C ++++  D +L + + + +AGL  DI  ++ L+   
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQAC-SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G      VVL  +L S   P+ +TF +LI G C  S +  A A + +       P++
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NTL+ GL   G    A  +  EM     E      PN +TY+ +  G  K+    +A
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE------PNNLTYDILATGHGKQSNKVEA 818

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L+ +M  +   P V TY ++I  F  A    +AK LF +M  +GV P   T+ +++  
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
             +     +  + L+ M  +G +P+  T + +   +        A++L 
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|296087920|emb|CBI35203.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 179/349 (51%), Gaps = 54/349 (15%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           T ++AL  F  ML MHP PPP+  F  L   +AK KHY TVLSL K+++S G+ PD+YT 
Sbjct: 45  TLDDALSSFHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 103

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR- 204
           +I+IN FC + RV     VL +IL+    P+  TFT+L++GLC   +I EA  +F K   
Sbjct: 104 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 163

Query: 205 ------------VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
                            PD+FTYN+LI+ LC          L  EM            PN
Sbjct: 164 EGFQPNPNLIMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK------IMPN 217

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR--- 309
            V+ N ++D LCKEG V +A ++   M    + PDVVTY +++ G C  ++ +EA +   
Sbjct: 218 VVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD 277

Query: 310 --------------------LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL- 348
                               LF EM+  G  P++VT+S+++D LCKN ++ +A  LL+  
Sbjct: 278 MMVRNGCVCNVVSYNTLINALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 337

Query: 349 ----------MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
                     +  RG+ P+ +T+N +I G C    +D A KLF  M+ N
Sbjct: 338 EGTARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDEN 386



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 178/358 (49%), Gaps = 42/358 (11%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+L     P    F  L+  +          +L  K   F   PDV+T   +IN  C   
Sbjct: 55  RMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLN 114

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN--- 283
               AL++  ++        +  +P+T T+ T++ GLC  G + +A ++F KM  E    
Sbjct: 115 RVDFALSVLAKI------LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQP 168

Query: 284 ----------INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
                     I+PD+ TY S+I   C   +W     L  EM+   + P+VV+ ++++D L
Sbjct: 169 NPNLIMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDAL 228

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK GK+ +A  ++++MI  GV P+  TY  L+DG+CL  ++D A K+F  M  NGC+ +V
Sbjct: 229 CKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNV 288

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK---- 449
           VSYNTLIN            +L++EM++ G  P +VTY+ L   L + H++  A+     
Sbjct: 289 VSYNTLIN------------ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 336

Query: 450 -------LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
                  LF  +    +  D +T+N  I GLCK G + EA +LFR + ++  + N  S
Sbjct: 337 IEGTARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENDIKSNSTS 394



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 22/258 (8%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P    +  ++  + K         L  KM    I PDV T T VI  FC+ N  + A  +
Sbjct: 63  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 122

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +++  G QPD  TF+ ++  LC  GK+ +A  + + M+  G  PN      LI     
Sbjct: 123 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNP----NLI----- 173

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
                        M + G   D+ +YN+LI+  C   + +   +L +EM+   I P VV+
Sbjct: 174 -------------MIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 220

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
            N +   L +  +V  A  + D M +  V  D  TY   +DG C    + EA+++F  + 
Sbjct: 221 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 280

Query: 491 DSKYELNIVSYNCLIDGL 508
            +    N+VSYN LI+ L
Sbjct: 281 RNGCVCNVVSYNTLINAL 298



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 13/219 (5%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N  ++A   F  M+     P +  F+ ++  + K         L + M   G+ P+ YT 
Sbjct: 44  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 103

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE--- 418
             +I+ +C  +++D A  +   +   G   D  ++ TL+   C    + EAL ++ +   
Sbjct: 104 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 163

Query: 419 ----------MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
                     M++KGI P + TYN+L   L  + + +    L +EM ++ +  +  + N 
Sbjct: 164 EGFQPNPNLIMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 223

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +D LCK G V EA ++   +     E ++V+Y  L+DG
Sbjct: 224 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDG 262


>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
          Length = 327

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 174/297 (58%), Gaps = 6/297 (2%)

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           + TY  LI      G     + L +EM     E G+  +P+   +N ++ G+C+EG VD+
Sbjct: 25  LVTYTILIEATILKGGVDDVMKLLDEMI----ESGL--RPDMFIFNAVVGGMCREGLVDR 78

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A E    +  +   PDV++Y+ ++RG      W + ++L  +M+ +G +P+VVT+S+++ 
Sbjct: 79  AFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILIS 138

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            LC++GK+++A  LL++M  +G+ P+ Y+Y+ LI  +C   ++D A +   SM S+GC+ 
Sbjct: 139 SLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLP 198

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+V+YNT+++  CKN   +EAL ++ ++   G  P V +YNTLF  L+      RAL + 
Sbjct: 199 DIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMI 258

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EM    +  D  TYN+ I  LC+   V +A+EL   +  S Y+ +++SYN ++ GL
Sbjct: 259 LEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGL 315



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 6/308 (1%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           + T++ILI      G V     +L  ++ S   P+   F +++ G+C E  +  A     
Sbjct: 25  LVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIR 84

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                   PDV +Y+ L+ GL           L  +M +        C+PN VTY+ +I 
Sbjct: 85  YISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKG------CEPNVVTYSILIS 138

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LC++G V++A  L   MK++ + PD  +Y  +I  FC  +  + A      M+  G  P
Sbjct: 139 SLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLP 198

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D+V ++ I+  LCKNGK D+A ++ E +   G  PN  +YNTL      +     A  + 
Sbjct: 199 DIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMI 258

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M S     D ++YN+LI+  C++  V++A+ L  +M S   +P+V++YN + LGL ++
Sbjct: 259 LEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKV 318

Query: 442 HQVERALK 449
           H++  A++
Sbjct: 319 HRISDAIE 326



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 155/313 (49%), Gaps = 6/313 (1%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
             +P  + ++ IL          D V+ L   +  +GL PD++  + ++   C+ G V  
Sbjct: 19  QTNPISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDR 78

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
            F  +  I    + P+ ++++ L++GL  + +  +   L +      CEP+V TY+ LI+
Sbjct: 79  AFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILIS 138

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LCR G    A++L + M     E G+   P+  +Y+ +I   CKE  VD A E    M 
Sbjct: 139 SLCRDGKVEEAVSLLKVMK----EQGLT--PDAYSYDPLIAAFCKESRVDLAIEFLESMI 192

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +   PD+V Y +++   C     +EA ++F ++ + G  P+V +++ +   L  +G   
Sbjct: 193 SDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKI 252

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  ++  M+ + ++P+  TYN+LI   C    +D A +L V MES+     V+SYN ++
Sbjct: 253 RALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVL 312

Query: 401 NWYCKNKDVEEAL 413
               K   + +A+
Sbjct: 313 LGLSKVHRISDAI 325



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 282 ENINP-DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +  NP  +VTYT +I         ++  +L  EM++ G++PD+  F+ ++  +C+ G +D
Sbjct: 18  QQTNPISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVD 77

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A   +  +  +G  P+  +Y+ L+ G     K +   KL   M S GC  +VV+Y+ LI
Sbjct: 78  RAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILI 137

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  C++  VEEA+SL   M  +G+ P   +Y+ L     +  +V+ A++  + M  +   
Sbjct: 138 SSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCL 197

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            D   YN  +  LCK+G   EAL++F  + +     N+ SYN L   L
Sbjct: 198 PDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSAL 245


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 210/401 (52%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++NIL   L + +     L+L++++N  G+ P I T+  L+ C+C  G +     +
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +    FTPN VT+T+L+KG   ++   +A AL  + +      + +TYNTLINGLC 
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G       + +         G V  P  +TYN+II+G  K G +  A  ++ +M  + I
Sbjct: 504 VGRVCEVGEMLKRFETE----GFV--PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTYTS I G+C  +  + A ++  ++  +G++PD+  ++ ++   C+ G M  A +
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L LM+  G+ PN   YN+ I GY     ++ A + +  M   G   D  +Y TLI+ + 
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFS 677

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+ +V  AL LYSEM++KG  P  +T+  L  GL     ++ A KL DEM R  +  +  
Sbjct: 678 KDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL 737

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            YN  I+G  ++G + EA  L   + + K   +  +Y+ L+
Sbjct: 738 MYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 206/410 (50%), Gaps = 7/410 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R H   P  + FN++   L  +K +   +SLFK +  +G+ PD +T++ILI+  C+  +
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRK 401

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +  ++  +   P  VT+ SL+   C    + EA  L+T+       P+V TY T
Sbjct: 402 IREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTT 461

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L+ G         A  L  EM       GV C  N  TYNT+I+GLC  G V +  E+  
Sbjct: 462 LMKGHINKAAFDKAYALLAEMKQN----GVSC--NDYTYNTLINGLCVVGRVCEVGEMLK 515

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           + + E   P  +TY S+I GF  A     A  ++ +M  +G+ P++VT++  +D  CK  
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             D A ++L  +  +G+ P+   YN+LI G+C    + HA ++ V M  +G + ++  YN
Sbjct: 576 CCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYN 635

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           + I  Y   K +EEAL  Y +M+ +GI     TY TL  G  +   V  ALKL+ EM   
Sbjct: 636 SFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               D  T+     GLC++G + +A +L   +       N++ YN LI+G
Sbjct: 696 GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLING 745



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 194/399 (48%), Gaps = 7/399 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN +   L K    +  L +   L + G    +   + L++ +C    V     +    
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           LR    P  VT+T LI+G   E    +A  L  + R     P    +N +I GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A++LF+EMA+     G+   P+  TYN +I  LC+   + +A  L+ KM +  + P +
Sbjct: 369 KDAVSLFKEMADS----GI---PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY S++  +C     +EA +L+ EM  +G  P+VVT++ +M         DKA  LL  
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   GV+ N YTYNTLI+G C+  ++    ++    E+ G +   ++YN++IN + K   
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           +  A ++Y +M +KGI P +VTY +   G  +    + ALK+ +++R   +  D   YN+
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            I G C+ G +  AL++   +       NI  YN  I G
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 193/410 (47%), Gaps = 7/410 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R    P     F+++     K   YD  + LF  + ++ + PD    S+ I   CK+  
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
            +   +VL ++  + F P   TF S++  L    R+ EA  +  +      +  V    T
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++G C       AL++FEE        G+V  P  VTY  +I G  +EG  +KA EL  
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M+D  + P    +  VI+G      W +A  LF EM D G+ PD  T+++++  LC+  
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K+ +A  L E M   GV P   TY++L+  YC+   +D A KL+  M   G   +VV+Y 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TL+  +      ++A +L +EM   G+     TYNTL  GL  + +V    ++       
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                  TYN+ I+G  K+G +  A  +++ +       NIV+Y   IDG
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 176/402 (43%), Gaps = 73/402 (18%)

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
           TP+A + T L+      +   +A AL  + R      D + ++ ++    + G    A+ 
Sbjct: 139 TPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDAVR 198

Query: 234 LFEEMANGNGE---------FGVVCK--------------------PNTVTYNTIIDGLC 264
           LF+EM     E            +CK                    P   T+N+++D L 
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258

Query: 265 KEGFVDKAKELFLKMKDENINP----DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           K G +++A    L +KDE +       VV  T+++ G+C   +  +A  +F E +  G+ 
Sbjct: 259 KGGRMEEA----LHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLV 314

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELM-----------------------IWR----- 352
           P  VT++V++    + G  +KA  L   M                       +W+     
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 353 -------GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
                  G+ P+ +TYN LI   C   KI  A  L+  M   G    +V+Y++L+  YC 
Sbjct: 375 FKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           N  ++EA+ LY+EM  KG  P VVTY TL  G       ++A  L  EM++N V+ + YT
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I+GLC  G V E  E+ +      +    ++YN +I+G
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 17/338 (5%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +A  F  +++    E    +A  LF +      EPD    +  I  LC+      AL + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----DVVTY 291
            +M +     G V  P   T+N+++D L K G +++A    L +KDE +       VV  
Sbjct: 236 RKMQDA----GFV--PWDFTFNSVVDVLVKGGRMEEA----LHIKDELLATGKKMSVVLA 285

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
           T+++ G+C   +  +A  +F E +  G+ P  VT++V++    + G  +KA  L   M  
Sbjct: 286 TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345

Query: 352 RGVNPNTYTYNTLIDGYCLTDKI-DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            G+ P+T  +N +I G  L DK+   A  LF  M  +G + D  +YN LI+W C+ + + 
Sbjct: 346 HGLLPSTNEFNMVIKGL-LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIR 403

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EAL+L+ +M   G+KP +VTY++L L       ++ A+KL+ EM       +  TY   +
Sbjct: 404 EALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G        +A  L   ++ +    N  +YN LI+GL
Sbjct: 464 KGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL 501



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 1/231 (0%)

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           +M+ +    D   +  V+R       +++A RLF EM    ++PD    SV +  LCK  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             ++A  +L  M   G  P  +T+N+++D      +++ A  +   + + G    VV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TL++ YC  ++V +AL ++ E L  G+ PT VTY  L  G  E    E+A +L  +MR +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   T  +N  I GL       +A+ LF+ + DS    +  +YN LI  L
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWL 396



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 102/230 (44%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M+   + PD  + T ++     +    +A  L  EM  +G   D   F V+M    K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            D A RL + M    + P+    +  I   C     + A  +   M+  G +    ++N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++   K   +EEAL +  E+L+ G K +VV   TL  G     +V +AL +F+E  R+ 
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +     TY   I G  + G   +A EL R +RD     +   +N +I GL
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 59/126 (46%)

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           SME+ G   D  S   L+    ++    +AL+L +EM  KG       ++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
             + A++LFDEM  + +  D    +  I  LCK      AL + R ++D+ +     ++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 503 CLIDGL 508
            ++D L
Sbjct: 252 SVVDVL 257


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 212/419 (50%), Gaps = 7/419 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL ++  M+      P + +++ L   L K +  + V+ L K +   GL P++YT +I
Sbjct: 209 GEALEVYRRMVS-EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I    + G++   + +  R+      P+ VT+T LI  LC   ++  A  LF K +   
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD   Y TL++     G     L+ F+E  +     G +  P+ VT+  ++D LCK  
Sbjct: 328 HKPDQVIYITLLDKFNDFGD----LDTFKEFWSQMEADGYM--PDVVTFTILVDVLCKAR 381

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A   F  M+ + I P++ TY ++I G   A    +A +L   M   GVQP   T++
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYN 441

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           + +D   K+G+  KA    E M  +G+ PN    N  +       ++  A+ +F  +  N
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D V+YN ++  Y K   V+EA++L SEM+  G +P V+  N+L   L++  +V+ A
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            ++FD M+   ++    TYN  + GL K G V +A+ELF ++ + K   N +S+N L+D
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 206/437 (47%), Gaps = 41/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  +F  L+       + ++  ++  AG   + Y+++ LI+   + G       V  
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R++     P+  T+++L+  L  +        L  +       P+V+T+   I  L R G
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +F  M +        C P+ VTY  +ID LC  G ++ AKELF+KMK     P
Sbjct: 277 KIDEAYEIFRRMDDEG------CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V Y +++  F    D +  K  + +M   G  PDVVTF++++D LCK    D+A    
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           ++M  +G+ PN +TYNTLI G     +I+ A KL  +MES G      +YN  I+++ K+
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYN----------------TLFLGLFE---------- 440
            +  +A+  + +M +KGI P +V  N                T+F GL E          
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510

Query: 441 ---------IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
                    + QV+ A+ L  EM RN    D    N+ ID L K+G V EA ++F  ++D
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570

Query: 492 SKYELNIVSYNCLIDGL 508
            K    +V+YN L+ GL
Sbjct: 571 MKLSPTVVTYNTLLSGL 587



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 193/425 (45%), Gaps = 41/425 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG--- 161
           P V +F I    L +    D    +F+R++  G  PD+ T+++LI+  C  G++ +    
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 162 FVVL--------------------------------GRILRSCFTPNAVTFTSLIKGLCA 189
           FV +                                 ++    + P+ VTFT L+  LC 
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                EA A F   R     P++ TYNTLI GL R G    AL L   M +      V  
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES------VGV 433

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P   TYN  ID   K G   KA E F KMK + I P++V   + +          EAK 
Sbjct: 434 QPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F  + + G+ PD VT++++M    K G++D+A  LL  MI  G  P+    N+LID   
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++D A ++F  M+       VV+YNTL++   K   V++A+ L+  M+ K   P  +
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTI 613

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           ++NTL     +  +VE ALK+F +M       D  TYN  I GL K   V  A   F  +
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673

Query: 490 RDSKY 494
           + S +
Sbjct: 674 KKSMH 678



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 167/326 (51%), Gaps = 7/326 (2%)

Query: 148  LINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            L+   CK  R  + + +  +  +    +P   ++  LI  L       +A  LF   +  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             C PD FT+N L+    ++G       L++EM +        CKP+ +TYN +I  L K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------CKPDAITYNIVISSLAKS 871

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              +DKA + F  +   +  P   TY  +I G        EA RLF EM D G +P+   F
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +++++   K G  + A +L + M+  G+ P+  +Y  L+D  CL  ++D A   F  ++S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   D ++YN +IN   K++ +EEAL+LY+EM ++GI P + TYN+L L L     VE+
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDG 472
            A ++++E++   +  D +TYN  I G
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 180/345 (52%), Gaps = 6/345 (1%)

Query: 90   ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
            A  IFD   +     P ++S+N L G L +  + +    LFK + + G  PD +T ++L+
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 150  NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
                K G+++  F +   ++     P+A+T+  +I  L   + + +A   F         
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 210  PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            P   TY  LI+GL + G    A+ LFEEM+    ++G  CKPN   +N +I+G  K G  
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMS----DYG--CKPNCAIFNILINGYGKIGDT 944

Query: 270  DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            + A +LF +M +E I PD+ +YT ++   C A   +EA   F E+   G+ PD + ++ I
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 330  MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
            ++ L K+ +M++A  L   M  RG+ P+ YTYN+L+    L   ++ A++++  ++  G 
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064

Query: 390  MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
              DV +YN LI  Y  +++ E A ++Y  M+  G  P + TY  L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 208/447 (46%), Gaps = 44/447 (9%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR +   P   ++N++  C +K    D  ++L   +   G  PD+   + LI+   K GR
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   + +  R+     +P  VT+ +L+ GL  E R+ +A  LF       C P+  ++NT
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++  C+     +AL +F +M   +      CKP+ +TYNT+I GL KE  V+ A   F 
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWFFH 671

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEA---------------KRLFIEMMDQG--VQ 320
           ++K ++++PD VT  +++ G        +A                R F E +  G  V+
Sbjct: 672 QLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLL-----------ELMIWR---------GVNPNTYT 360
            ++    +  +EL  NG   + S L+           EL  ++         G++P   +
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN LI         + A  LF  M++ GC  D  ++N L+  + K+  + E   LY EM+
Sbjct: 791 YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           S+  KP  +TYN +   L + + +++AL  F ++  +       TY   IDGL K G + 
Sbjct: 851 SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           EA+ LF  + D   + N   +N LI+G
Sbjct: 911 EAMRLFEEMSDYGCKPNCAIFNILING 937



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 208/455 (45%), Gaps = 45/455 (9%)

Query: 90   ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
            AL +F  M  M   P  ++   +++G + +NK  +     F +L  + + PD  T   L+
Sbjct: 631  ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK-VNHAFWFFHQLKKS-MHPDHVTICTLL 688

Query: 150  NCFCKMGRVSHGFVV--------------------LGRILRSCFTPNAVTFTS------- 182
                K G++     +                    +G  L       A+ F         
Sbjct: 689  PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 183  ---------LIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVAL 232
                     L++ LC   R + A  +F K  +     P + +YN LI  L    +T  A 
Sbjct: 749  CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 233  NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +LF++M N      V C P+  T+N ++    K G + +  EL+ +M      PD +TY 
Sbjct: 809  DLFKDMKN------VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN 862

Query: 293  SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
             VI     +N+ ++A   F +++    +P   T+  ++D L K G++++A RL E M   
Sbjct: 863  IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922

Query: 353  GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            G  PN   +N LI+GY      + A +LF  M + G   D+ SY  L++  C    V+EA
Sbjct: 923  GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982

Query: 413  LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            L  ++E+ S G+ P  + YN +  GL +  ++E AL L++EMR   +  D YTYN+ +  
Sbjct: 983  LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042

Query: 473  LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            L  +G V +A  ++  ++ +  E ++ +YN LI G
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 6/297 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   +FN+L     K+     +  L+K + S    PD  T++I+I+   K   +      
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               ++ S F P   T+  LI GL    R+ EA  LF +   + C+P+   +N LING  +
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G T  A  LF+ M N         +P+  +Y  ++D LC  G VD+A   F ++K   +
Sbjct: 941  IGDTETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            +PD + Y  +I G   +    EA  L+ EM ++G+ PD+ T++ +M  L   G +++A R
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            + E +   G+ P+ +TYN LI GY L++  +HA  ++ +M  +GC  ++ +Y  L N
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 204/486 (41%), Gaps = 66/486 (13%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA+ +   M+R +   P V   N L   L K    D    +F R+    L P + T++ 
Sbjct: 524  DEAVNLLSEMIR-NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            L++   K GRV     +   ++    +PN ++F +L+   C    +  A  +F+K  V  
Sbjct: 583  LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 208  CEPDVFTYNT----------------------------------LINGLCRTGHTIVALN 233
            C+PDV TYNT                                  L+ GL + G    A++
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS 702

Query: 234  L----------------FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELF 276
            +                +E++  G      + K        +++G+C+E  F+     + 
Sbjct: 703  IARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVL 762

Query: 277  LKMKDE--------------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             K K E               I+P + +Y  +I      +   +A  LF +M + G  PD
Sbjct: 763  CKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD 822

Query: 323  VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
              TF++++    K+GK+ +   L + MI R   P+  TYN +I     ++ +D A   F 
Sbjct: 823  AFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFY 882

Query: 383  SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             + S+       +Y  LI+   K   +EEA+ L+ EM   G KP    +N L  G  +I 
Sbjct: 883  DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG 942

Query: 443  QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
              E A +LF  M    +  D  +Y   +D LC +G V EAL  F  ++ +  + + ++YN
Sbjct: 943  DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN 1002

Query: 503  CLIDGL 508
             +I+GL
Sbjct: 1003 RIINGL 1008



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 84/171 (49%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K++  + + E M  + +  +  TY T+     +   +     +   M   G + +  SYN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            LI+   ++    EAL +Y  M+S+G+KP++ TY+ L + L +    E  + L  EM   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  + YT+   I  L ++G + EA E+FR + D     ++V+Y  LID L
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  + ++ D+ T+  I   L   G + + + +L  M   G   N Y+YN LI     +  
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A +++  M S G    + +Y+ L+    K +D E  + L  EM   G++P V T+  
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
               L    +++ A ++F  M       D  TY   ID LC +G +  A ELF  ++ + 
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 494 YELNIVSYNCLID 506
           ++ + V Y  L+D
Sbjct: 328 HKPDQVIYITLLD 340



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 67/139 (48%)

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           +TD I      +   E    +H   + N ++ +   +  VE+  +++  M  K I+  + 
Sbjct: 99  MTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLD 158

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY T+F  L     + +   + ++MR+     + Y+YN  I  L +SGF  EALE++R +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + ++ +Y+ L+  L
Sbjct: 219 VSEGLKPSLKTYSALMVAL 237


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 218/454 (48%), Gaps = 35/454 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL----NSAGLFPDIY 143
           + AL +F  +  MH   P V + N L   L K+   D  L L+ ++    +  G   D Y
Sbjct: 143 DRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNY 202

Query: 144 THSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           T SI++   C +G++  G  +V  R  + C  P+ V +  +I G C +  +  A     +
Sbjct: 203 TTSIVVKGLCNLGKIEEGRRLVKDRWGKGC-VPHVVFYNMIIDGYCKKGDLQCATRTLKE 261

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFGV 247
            ++    P V TY  LING C+ G       L  EMA               +   ++G+
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGL 321

Query: 248 V--------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           V              C P+  TYNT+I+  CK G + +A E   K K+  + P+  +YT 
Sbjct: 322 VTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTP 381

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           ++  +C   D+ +A  +   + + G +PD+V++   +  +  +G++D A  + E M+ +G
Sbjct: 382 LMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKG 441

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V P+   YN L+ G C   +    + L   M       DV  + TL++ + +N +++EA+
Sbjct: 442 VFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAI 501

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            ++  ++ KG+ P +V YN +  G  +  ++  AL   ++M+  H A D YTY+  IDG 
Sbjct: 502 KIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGY 561

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            K   +  AL++F  +   K++ N+++Y  LI+G
Sbjct: 562 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLING 595



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 6/411 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+M    P V ++  L     K   ++ V  L   + + GL  ++   + +I+   K G 
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGL 321

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V+     + R+      P+  T+ ++I   C   RI EA     K +     P+ F+Y  
Sbjct: 322 VTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTP 381

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++  C+ G  + A  +   +A    E G   KP+ V+Y   I G+   G +D A  +  
Sbjct: 382 LMHAYCKQGDYVKAAGMLFRIA----EIGE--KPDLVSYGAFIHGVVVHGEIDVALMVRE 435

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           KM ++ + PD   Y  ++ G C    +   K L  EM+D+ VQPDV  F+ +MD   +NG
Sbjct: 436 KMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNG 495

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           ++D+A ++ +++I +GV+P    YN +I G+C   K+  A      M++     D  +Y+
Sbjct: 496 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS 555

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           T+I+ Y K  D+  AL ++ +M+    KP V+TY +L  G  +   + RA K+F  M+  
Sbjct: 556 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSF 615

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  +  TY   + G  K+G   +A  +F  +  +    N  +++ LI+GL
Sbjct: 616 DLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 191/428 (44%), Gaps = 55/428 (12%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
            +R+   G  PDI T++ +IN  CK GR+      L +       PN  ++T L+   C 
Sbjct: 329 MRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCK 388

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           +   ++AA +  +      +PD+ +Y   I+G+   G   VAL + E+M     E GV  
Sbjct: 389 QGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMM----EKGVF- 443

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+   YN ++ GLCK G     K L  +M D N+ PDV  + +++ GF    + +EA +
Sbjct: 444 -PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIK 502

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F  ++ +GV P +V ++ ++   CK GKM  A   L  M      P+ YTY+T+IDGY 
Sbjct: 503 IFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYV 562

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               +  A K+F  M  +    +V++Y +LIN +CK  D+  A  ++  M S  + P VV
Sbjct: 563 KQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVV 622

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT------------------------ 465
           TY TL  G F+  + E+A  +F+ M  N    +  T                        
Sbjct: 623 TYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSM 682

Query: 466 -------------------------YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
                                    YN+ I  LCK G V  A  L   +    + ++ V 
Sbjct: 683 ENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVC 742

Query: 501 YNCLIDGL 508
           +  ++ GL
Sbjct: 743 FTAMLHGL 750



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 20/348 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+      +  +   D  L + +++   G+FPD   +++L++  CK GR     ++
Sbjct: 409 PDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLL 468

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+   F +L+ G      + EA  +F        +P +  YN +I G C+
Sbjct: 469 LSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 528

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+   +M N      V   P+  TY+T+IDG  K+  +  A ++F +M     
Sbjct: 529 FGKMTDALSCLNKMKN------VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKF 582

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+TYTS+I GFC   D   A+++F  M    + P+VVT++ ++    K GK +KA+ 
Sbjct: 583 KPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATS 642

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLT----------DKIDHARKL----FVSMESNGCM 390
           + ELM+  G  PN  T++ LI+G   T          D +++ R L    F  M S G  
Sbjct: 643 IFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWD 702

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             + +YN++I   CK+  V+ A  L ++ML+KG     V +  +  GL
Sbjct: 703 QVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGL 750



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 15/340 (4%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + V  +SL+K L +     E   +    +    +P    ++ LI     +G    AL LF
Sbjct: 90  DGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLF 149

Query: 236 ---EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM--KDENINPDVVT 290
               EM N        C P  V  N++++GL K G VD A +L+ KM   D+     V  
Sbjct: 150 HTVREMHN--------CLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDN 201

Query: 291 YTS--VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           YT+  V++G C      E +RL  +   +G  P VV +++I+D  CK G +  A+R L+ 
Sbjct: 202 YTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKE 261

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           +  +GV P   TY  LI+G+C   + +   +L   M + G   +V  +N +I+   K   
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGL 321

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V +A      M   G  P + TYNT+     +  +++ A +  ++ +   +  + ++Y  
Sbjct: 322 VTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTP 381

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   CK G  ++A  +   I +   + ++VSY   I G+
Sbjct: 382 LMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGV 421



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 152/357 (42%), Gaps = 55/357 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+L   L KN  +  +  L   +    + PD+Y  + L++ F + G +     +
Sbjct: 444 PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKI 503

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              I+R    P  V + ++IKG C   ++ +A +   K +     PD +TY+T+I+G  +
Sbjct: 504 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVK 563

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL +F +M           KPN +TY ++I+G CK+  + +A+++F  MK  ++
Sbjct: 564 QHDMSSALKMFGQMMKHK------FKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDL 617

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF------------------ 326
            P+VVTYT+++ GF  A    +A  +F  M+  G  P+  TF                  
Sbjct: 618 VPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIE 677

Query: 327 ---------SVIMDE----------------------LCKNGKMDKASRLLELMIWRGVN 355
                    S+I+D                       LCK+G +D A  LL  M+ +G  
Sbjct: 678 EKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFL 737

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            ++  +  ++ G C   K    R +     +   +   V Y+  ++ Y     + EA
Sbjct: 738 IDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEA 794



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 58/313 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ IF  ++R     P +  +N +     K       LS   ++ +    PD YT+S 
Sbjct: 498 DEAIKIFKVIIR-KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYST 556

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I+ + K   +S    + G++++  F PN +T+TSLI G C ++ ++ A  +F   + F 
Sbjct: 557 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD 616

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGL--- 263
             P+V TY TL+ G  + G    A ++FE M  NG       C PN  T++ +I+GL   
Sbjct: 617 LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNG-------CPPNDATFHYLINGLTNT 669

Query: 264 ----------------------------------------------CKEGFVDKAKELFL 277
                                                         CK G VD A+ L  
Sbjct: 670 ATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLT 729

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           KM  +    D V +T+++ G C+     E + +    +++      V +S+ +D+    G
Sbjct: 730 KMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQG 789

Query: 338 KMDKASRLLELMI 350
           ++ +AS +L+ +I
Sbjct: 790 RLSEASVILQTLI 802



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D V++++L+      +   E   +   M ++ +KPT   ++ L L   E   ++RAL
Sbjct: 87  CSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRAL 146

Query: 449 KLFDEMRRNHVAADTYTY-NNFIDGLCKSGFVLEALELF 486
           +LF  +R  H    T    N+ ++GL KSG V  AL+L+
Sbjct: 147 QLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLY 185


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 206/416 (49%), Gaps = 12/416 (2%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSILINCFCK 154
           Y   +H  P P ++   L   L ++   +      +   +AG +FP  +  S++I+  CK
Sbjct: 14  YHRSLHLPPSPDAAHAQLLA-LHESGDANAAARFLREKTAAGSIFPG-FLSSVVIDRACK 71

Query: 155 MGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
            G +    ++L  +L S    PN   F SLI  L   +R+ +AA      R     PDV 
Sbjct: 72  SGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVV 131

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           T+  +I G C+      A  +F+EM   N      C+P+   Y  +IDG CKE  +D+A 
Sbjct: 132 TFTVMIRGFCKNRMMERAWEIFQEMIKSN-----RCQPDCFLYGVLIDGYCKELRMDRAL 186

Query: 274 ELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVTFSVIMD 331
           EL  +M+ E  I PDVV Y S++ G C +N + EA +   E M+ QG  P VVT++ ++ 
Sbjct: 187 ELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIR 246

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK  KM  A R+   M+ R + P   +Y+ +IDG     ++  A ++   ME+ GC  
Sbjct: 247 GACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCEL 306

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           +VV Y TLI+  CK+  +++A +LY  M   G  P   TY TL        + E AL LF
Sbjct: 307 NVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF 366

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D + R++   D   Y   + GLC+   + +A  LFR +R +    +  +YN L+ G
Sbjct: 367 DHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHG 421



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 206/424 (48%), Gaps = 17/424 (4%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL I   ML     PP   +F  L   L+K+          + +  AG+ PD+ T +++I
Sbjct: 78  ALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMI 137

Query: 150 NCFCKMGRVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-F 206
             FCK   +   + +   +++S  C  P+   +  LI G C E R+  A  L  + RV  
Sbjct: 138 RGFCKNRMMERAWEIFQEMIKSNRC-QPDCFLYGVLIDGYCKELRMDRALELLREMRVER 196

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             +PDV  YN++++GLCR+   + A    +E     G     C P  VTY ++I G CK 
Sbjct: 197 RIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQG-----CSPTVVTYTSLIRGACKA 251

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +  A  ++  M +  I P +V+Y+ +I G   A    +A R+  EM   G + +VV +
Sbjct: 252 KKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIY 311

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D LCK+G +D A  L  +M   G  PN  TY TLID +C  D+ + A  LF  +  
Sbjct: 312 TTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR- 370

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           + C  DV  Y  +++  C+ + +++A +L+ EM   G+      YN L  G F   + E 
Sbjct: 371 DYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEE 430

Query: 447 ALKLFDEMRRN-HVAADTYTYNNFIDGLC-KSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           A ++ +E+  +    A+  TYN  I G C +SG V     LF  +R      +  +Y+ L
Sbjct: 431 AFRILEELGDDPGCVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSAL 485

Query: 505 IDGL 508
           ID L
Sbjct: 486 IDRL 489



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 155/327 (47%), Gaps = 19/327 (5%)

Query: 105 PPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P V  +N I+ G    N+  +    L + +   G  P + T++ LI   CK  ++     
Sbjct: 200 PDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVR 259

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L     P  V+++ +I GL    R+ +A  +  +     CE +V  Y TLI+GLC
Sbjct: 260 IWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC 319

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           ++G    A  L+  M   +G F     PN  TY T+ID  C+    + A  LF  ++D  
Sbjct: 320 KSGFLDDAYALYRIMKR-SGAF-----PNQRTYATLIDTFCRNDRTETALGLFDHIRD-Y 372

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              DV  YT+V+ G C     ++A+ LF EM   GV  D   ++V++    ++ + ++A 
Sbjct: 373 CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAF 432

Query: 344 RLLELMIWRGVNP----NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           R+LE +   G +P    N  TYNT+I G CL   +     LF  M   G   D  +Y+ L
Sbjct: 433 RILEEL---GDDPGCVANLLTYNTVIAGCCLESGM----VLFYEMRQRGIAPDFATYSAL 485

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKP 426
           I+    + ++  A  L  EML+ G+ P
Sbjct: 486 IDRLLGSGEIGRAFDLCEEMLASGLSP 512



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 10/310 (3%)

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
           HR     P     +  +  L  +G    A     E       F     P  ++ + +ID 
Sbjct: 15  HRSLHLPPSPDAAHAQLLALHESGDANAAARFLREKTAAGSIF-----PGFLS-SVVIDR 68

Query: 263 LCKEGFVDKAKELFLKMKDENINP-DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            CK G +  A  +   M      P +   + S+I     +    +A R    M D G+ P
Sbjct: 69  ACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHP 128

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKL 380
           DVVTF+V++   CKN  M++A  + + MI      P+ + Y  LIDGYC   ++D A +L
Sbjct: 129 DVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALEL 188

Query: 381 FVSMESNGCMH-DVVSYNTLINWYCKNKDVEEALSLYSE-MLSKGIKPTVVTYNTLFLGL 438
              M     +  DVV YN++++  C++    EA     E M+ +G  PTVVTY +L  G 
Sbjct: 189 LREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGA 248

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            +  +++ A+++++ M    +     +Y+  IDGL K+G V +A  + R +     ELN+
Sbjct: 249 CKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNV 308

Query: 499 VSYNCLIDGL 508
           V Y  LIDGL
Sbjct: 309 VIYTTLIDGL 318



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 12/242 (4%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  L   L K+   D   +L++ +  +G FP+  T++ LI+ FC+  R      +   I 
Sbjct: 311 YTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR 370

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
             C   +   +T+++ GLC E R+ +A ALF + R+     D   YN L++G  R+    
Sbjct: 371 DYC-PLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPE 429

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELFLKMKDENINPDV 288
            A  + EE+ +  G     C  N +TYNT+I G C E G V     LF +M+   I PD 
Sbjct: 430 EAFRILEELGDDPG-----CVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDF 479

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY+++I     + +   A  L  EM+  G+ P       ++  LC + + D A++++E+
Sbjct: 480 ATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKVIEM 539

Query: 349 MI 350
            +
Sbjct: 540 AM 541



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 39/325 (12%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA    D  + +    P V ++  L     K K     + ++  +    + P I ++S++
Sbjct: 220 EAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVI 279

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+   K GRV   + V+  +       N V +T+LI GLC    + +A AL+   +    
Sbjct: 280 IDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGA 339

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY TLI+  CR   T  AL LF+ + +        C  +   Y  ++ GLC+E  
Sbjct: 340 FPNQRTYATLIDTFCRNDRTETALGLFDHIRD-------YCPLDVAMYTAVVSGLCRERR 392

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR------------------- 309
           +D A+ LF +M+   ++ D   Y  ++ G   +    EA R                   
Sbjct: 393 LDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYN 452

Query: 310 -------------LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                        LF EM  +G+ PD  T+S ++D L  +G++ +A  L E M+  G++P
Sbjct: 453 TVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSP 512

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLF 381
            +     ++   C + + D A K+ 
Sbjct: 513 PSGVLGRVVARLCWSRRGDLAAKVI 537


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 209/420 (49%), Gaps = 7/420 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+      P + +++ L   L K +  +TV+ L + + S GL P+IYT +I 
Sbjct: 210 EALKVYRRMVS-EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    + G++   + +L R+  +   P+ VT+T LI  LC   ++  A  LF K +  + 
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PD  TY TL++     G        + EM   +G       P+ VT+  +ID LCK G 
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEM-EADGYL-----PDVVTFTILIDALCKVGK 382

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD+A      MK + + P++ TY ++I G    N  +EA  LF  M   G++    T+ +
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYIL 442

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D   K+G+  KA +  E M   G+ PN    N  +       +++ A++ F  ++  G
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D ++YN L+  Y K   V++A+ L SEM   G  P VV  N+L   L++  +V+ A 
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAW 562

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+F  M+   +A    TYN  + GL K G V EA  LF+ +       N +S+N L+D L
Sbjct: 563 KMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 182/332 (54%), Gaps = 9/332 (2%)

Query: 148  LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAA-ALFTKHRV 205
            L+   CK G+    + V  ++ +S C TP+   + SLI GL  ++R+ E A  LF K + 
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL-KARLTEMAWGLFYKMKN 816

Query: 206  FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              C PDVFTYN  ++ L ++G      +L+EEM          CKPNT+T+N +I GL K
Sbjct: 817  AGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG------CKPNTITHNIVIFGLVK 870

Query: 266  EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
               +DKA +L+  +   + +P   TY  +I G        EAK+ F EM+D G  P+   
Sbjct: 871  SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930

Query: 326  FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            ++++M+   K G ++ A  L   M+  G+ P+  +Y+ ++D  C+  K+D A   F  ++
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990

Query: 386  SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             +G   D+V YN +IN   +++ VEEALSL+ EM ++GI P + TYN L L L     VE
Sbjct: 991  LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050

Query: 446  RALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             A K+++E++   +  + +TYN  I G   SG
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 214/433 (49%), Gaps = 25/433 (5%)

Query: 95  DYMLRMHPSPPPVSSFNILFGCLAKN---KHYDTVLSLFK----------------RLNS 135
           +Y+L M  +   V    ++F  + K    +  +T L++FK                ++  
Sbjct: 126 NYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRK 185

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            G   + Y++  LI+   K G       V  R++     P+  T+++L+  L     I  
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
              L  +       P+++T+   I  L R G    A  + + M +        C P+ VT
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG------CGPDVVT 299

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  +ID LC  G ++ AKELFLKMK  +  PD VTY +++  F    D +  K  + EM 
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEME 359

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G  PDVVTF++++D LCK GK+D+A   L++M  +GV PN +TYNTLI G    +++D
Sbjct: 360 ADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLD 419

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +LF SMES G      +Y   I++Y K+ +  +A+  + +M + GI P +V  N   
Sbjct: 420 EALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASL 479

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L E  ++E A + F+ +++  +A D  TYN  +    K+G V +A++L   + ++  +
Sbjct: 480 YSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCD 539

Query: 496 LNIVSYNCLIDGL 508
             +V  N LID L
Sbjct: 540 PEVVIINSLIDTL 552



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 213/491 (43%), Gaps = 78/491 (15%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             EA  +F  M+     PP   SFN L  CL KN   D  L +  R+     FPD+ T++ 
Sbjct: 594  QEATALFKGMI-ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652

Query: 148  ----------------------------------LINCFCKMGRVSHGFVV--------- 164
                                              L+    K GR+   F V         
Sbjct: 653  VIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVG 712

Query: 165  -----------LGRILRSCFTPNAVTFTS----------------LIKGLCAESRIMEAA 197
                       +G IL       ++ F                  L+K LC   + ++A 
Sbjct: 713  DHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAY 772

Query: 198  ALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             +F K  + F   P +  YN+LI+GL +   T +A  LF +M N        C P+  TY
Sbjct: 773  NVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAG------CTPDVFTY 826

Query: 257  NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            N  +D L K G + +  +L+ +M      P+ +T+  VI G   +N  ++A  L+ ++M 
Sbjct: 827  NLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMS 886

Query: 317  QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
                P   T+  ++D L K G++++A +  E M+  G  PN   YN L++G+     ++ 
Sbjct: 887  GDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVET 946

Query: 377  ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            A +LF  M   G   D+ SY+ +++  C    V++AL  + E+   G+ P +V YN +  
Sbjct: 947  ACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMIN 1006

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            GL    +VE AL LFDEMR   +  D YTYN  I  L  +G V EA +++  ++    E 
Sbjct: 1007 GLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEP 1066

Query: 497  NIVSYNCLIDG 507
            N+ +YN LI G
Sbjct: 1067 NVFTYNALIRG 1077



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 200/396 (50%), Gaps = 12/396 (3%)

Query: 98  LRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           L+M  S   P   ++  L    + +   D +   +  + + G  PD+ T +ILI+  CK+
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKV 380

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+V   F  L  + +    PN  T+ +LI GL   +R+ EA  LF        E   +TY
Sbjct: 381 GKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTY 440

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
              I+   ++G +  A+  FE+M       G+V  PN V  N  +  L ++G +++AKE 
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKTN----GIV--PNIVACNASLYSLAEQGRLEEAKEF 494

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F  +K   + PD +TY  ++R +  A   ++A +L  EM + G  P+VV  + ++D L K
Sbjct: 495 FNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYK 554

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
             ++D+A ++ + M    + P   TYNTL+ G     ++  A  LF  M ++ C  + +S
Sbjct: 555 ADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTIS 614

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +NTL++  CKN +V+ AL +   M      P V+TYNT+  GL + ++V  A  LF +M+
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           +  +  D  T    + G+ K G + +A   FR  ++
Sbjct: 675 K-VIYPDYVTLCTLLPGVIKDGRIEDA---FRVAKE 706



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 173/330 (52%), Gaps = 6/330 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + ++N L   L K +  +    LF ++ +AG  PD++T+++ ++   K G++   F +
Sbjct: 786  PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +L     PN +T   +I GL   + + +A  L+         P  +TY  LI+GL +
Sbjct: 846  YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G    A   FEEM     ++G  C PN   YN +++G  K+G V+ A ELF +M  E I
Sbjct: 906  LGRLEEAKQFFEEML----DYG--CMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGI 959

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             PD+ +Y+ ++   C     ++A   F E+   G+ PD+V ++++++ L ++ ++++A  
Sbjct: 960  RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L + M  RG+ P+ YTYN LI    +   ++ A K++  ++  G   +V +YN LI  + 
Sbjct: 1020 LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHS 1079

Query: 405  KNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             + + + A ++Y +M+  G +P   T+  L
Sbjct: 1080 MSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 119/230 (51%), Gaps = 7/230 (3%)

Query: 103  SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
            SP P  ++  L   L K    +     F+ +   G  P+   ++IL+N F K G V    
Sbjct: 890  SPTP-WTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948

Query: 163  VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             +  R+++    P+  +++ ++  LC   ++ +A   F + ++   +PD+  YN +INGL
Sbjct: 949  ELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL 1008

Query: 223  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
             R+     AL+LF+EM N          P+  TYN +I  L   G V++A +++ +++ +
Sbjct: 1009 GRSQRVEEALSLFDEMRNRG------ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062

Query: 283  NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             + P+V TY ++IRG   + + + A  ++ +MM  G +P+  TF+ + ++
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQ 1112



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 107/256 (41%)

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
           T T N +++ L     V+    +F  M+ + I   + TY ++ +         EA     
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           +M   G   +  ++  ++  L K+G   +A ++   M+  G+ P+  TY+ L+       
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            I+    L   MES G   ++ ++   I    +   ++EA  +   M   G  P VVTY 
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L   L    ++  A +LF +M+ +    D  TY   +D     G +    E +  +   
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361

Query: 493 KYELNIVSYNCLIDGL 508
            Y  ++V++  LID L
Sbjct: 362 GYLPDVVTFTILIDAL 377



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 62/119 (52%)

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           +H   + N ++     ++ VE+ + +++ M  + IK ++ TY T+F  L+    +  A  
Sbjct: 119 IHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPV 178

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             ++MR+     + Y+Y   I  L KSGF  EAL+++R +     + ++ +Y+ L+  L
Sbjct: 179 ALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVAL 237


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K++     ++L+ ++  AG+ P I T+  L+  +C+ GR+     +
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +    F PN VT+T+L+KG   +     A AL  + R        +TYN LINGL  
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL-- 510

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             + +  +   +EM       G V  P T+TYN+II+G  K G +  A  ++ +M+ + I
Sbjct: 511 --YMVNRVCEVDEMLKRFLSEGFV--PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTYTS I G+C  N  + A +L I +   G+QPD+  ++  +D  CK G M +A  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L L++  G+ P+   YN+ + GY     +  A K + SM     + D   Y TLI+ + 
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +V  AL LYSEM++  + P   T+  L  GL     ++ A +L D+MRR  V+ +  
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           TYN  I+   + G + EA +L   +  S    +  +Y+ L
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 198/407 (48%), Gaps = 21/407 (5%)

Query: 115 GCLAKNKHYDTVLS-------------LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           GC A  K YD V+              LF  +  AG+ PD   ++I I+  CK+      
Sbjct: 180 GCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRA 239

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP-DVFTYNTLIN 220
             VLG++  + F P  +T++S++  L    R+ EA  L  +  +   +  DV     L++
Sbjct: 240 LQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMH 299

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C  G    AL+LF+E+ +     GV   P  VTY  +I G   EG  D+  +L  +M 
Sbjct: 300 GYCLNGEVGKALDLFDEVVSD----GVT--PTNVTYGVLIKGCDAEGMTDETYKLCRQMI 353

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           ++ + P    +  VI+G      W +A  L   ++D GV PDV T+  ++  LCK+ K+ 
Sbjct: 354 EQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLH 412

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  L + M   GV P+  TY++L+ GYC   ++D A KL+  M   G   + V+Y TL+
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLM 472

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
             Y K K  + A +L +EM   G+     TYN L  GL+ +++V    ++          
Sbjct: 473 KGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV 532

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             T TYN+ I+G  K+G +  A  ++R +R      NIV+Y   IDG
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDG 579



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 199/434 (45%), Gaps = 42/434 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL + D ML        V    +L      N      L LF  + S G+ P   T+ +
Sbjct: 272 DEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGV 331

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI      G     + +  +++     P+   F  +IKGL  + R  +A  L  K  V  
Sbjct: 332 LIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDT 390

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PDVFTY  LI+ LC+      A+NL+++M     E GV  KP+ VTY++++ G C++G
Sbjct: 391 GVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMK----EAGV--KPSIVTYHSLLLGYCEKG 444

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ------- 320
            +D+A +L+ +M D+   P+ VTYT++++G+     ++ A  L  EM   GV        
Sbjct: 445 RMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYN 504

Query: 321 ----------------------------PDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                                       P  +T++ I++   K G M  A  +   M  +
Sbjct: 505 ILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK 564

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN  TY + IDGYC T+  D A KL + +  +G   D+ +YN  I+ +CK  ++  A
Sbjct: 565 GITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRA 624

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L     +L  G+ P V  YN+   G   +  +  A K +  M +  V ADT  Y   IDG
Sbjct: 625 LHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDG 684

Query: 473 LCKSGFVLEALELF 486
             K G V  ALEL+
Sbjct: 685 FSKVGNVAFALELY 698



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 189/403 (46%), Gaps = 7/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    FN++   L ++K +   + L K +   G+ PD++T+  LI+  CK  ++     +
Sbjct: 359 PSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNL 417

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++  +   P+ VT+ SL+ G C + R+ EA  L+++       P+  TY TL+ G  +
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L  EM       GV C     TYN +I+GL     V +  E+  +   E  
Sbjct: 478 KKAFDNAYALLNEMRQN----GVSC--GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGF 531

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P  +TY S+I GF  A     A  ++ +M  +G+ P++VT++  +D  C+    D A +
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVK 591

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  +   G+ P+   YN  ID +C    +  A    V +  +G   DV  YN+ +  Y 
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK 651

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             K + EA   Y  M+ + +      Y TL  G  ++  V  AL+L+ EM  NHV  D  
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK 711

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T+     GLC+SG +  A  L   +R      NIV+YN LI+ 
Sbjct: 712 TFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINA 754



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 190/400 (47%), Gaps = 8/400 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKR-LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +++ +   L K +  D  L L  + L + G   D+   ++L++ +C  G V     +   
Sbjct: 257 TYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDE 316

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++    TP  VT+  LIKG  AE    E   L  +       P  + +N +I GL R   
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKR 376

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L + +     + GV   P+  TY  +I  LCK   + +A  L+ KMK+  + P 
Sbjct: 377 WKDAIGLLKLVV----DTGV---PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPS 429

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           +VTY S++ G+C     +EA +L+ EM D+G  P+ VT++ +M    K    D A  LL 
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLN 489

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   GV+   YTYN LI+G  + +++    ++     S G +   ++YN++IN + K  
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAG 549

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  A  +Y +M  KGI P +VTY +   G    +  + A+KL   +RR+ +  D   YN
Sbjct: 550 MMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYN 609

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            FID  CK G +  AL     +       ++  YN  + G
Sbjct: 610 AFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 170/378 (44%), Gaps = 43/378 (11%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R++     P+A + T L+      +   +A  LF + R   C  D   Y+ +I    R G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ LF+EMA      G   KP+   Y   I GLCK    D+A ++  KM++    P
Sbjct: 200 MHCDAVRLFDEMA------GAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP 253

Query: 287 DVVTYTSVI------------------------------------RGFCYANDWNEAKRL 310
             +TY+SV+                                     G+C   +  +A  L
Sbjct: 254 WELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDL 313

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
           F E++  GV P  VT+ V++      G  D+  +L   MI +G+ P+TY +N +I G   
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR 373

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +   A  L   +   G + DV +Y  LI+W CK++ + EA++L+ +M   G+KP++VT
Sbjct: 374 DKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y++L LG  E  +++ ALKL+ EM       +  TY   + G  K      A  L   +R
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492

Query: 491 DSKYELNIVSYNCLIDGL 508
            +       +YN LI+GL
Sbjct: 493 QNGVSCGDYTYNILINGL 510



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 6/237 (2%)

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           + +M    + PD  + T ++          +A  LF EM  +G   D   + V++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G    A RL + M   GV P+   Y   I G C     D A ++   M   G     ++
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 396 YNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           Y+++++   K + ++EAL L  +ML + G K  VV    L  G     +V +AL LFDE+
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD-----SKYELNIVSYNCLID 506
             + V     TY   I G    G   E  +L R + +     S YE N+V    L D
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRD 374



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 56/128 (43%)

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           +  M + G + D  S   L+          +AL+L+ EM  KG       Y+ +      
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
                 A++LFDEM    V  D   Y   I GLCK      AL++   +R++ +E   ++
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 501 YNCLIDGL 508
           Y+ ++D L
Sbjct: 258 YSSVVDVL 265


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 213/420 (50%), Gaps = 19/420 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A  +   M+R H  PP   +F        +N   D  + L  R+   G  PD+  +S L
Sbjct: 230 DAEALMAEMVRNH-CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTL 288

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N F + GRV     +L  +L     PN + + + +KGLC   R  +   L  +     C
Sbjct: 289 VNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDC 345

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T++ L + LC+ G    A+ + E+M     ++G  C+P+ V YNT+I    ++G 
Sbjct: 346 LPNEATFSMLTSCLCQNGLVDCAMEVLEQMH----KYG--CRPDAVIYNTLIYSFSEQGR 399

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A +L   M     +PDV+++ + ++G C A  W++A+ L ++M+ +      +TF++
Sbjct: 400 VDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNI 456

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LC+NG+++ A  + E M   G  P+  TY++LI+G      ++ A +LF SM    
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP--- 513

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+  YN ++   C+    E+A  L S M  K   P  +T+N L   L +   V+RA+
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAI 573

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++F++M +     D +TYN  I+G  + G + +A  L   +     + + VSYN  + GL
Sbjct: 574 EVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGL 630



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 181/335 (54%), Gaps = 18/335 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++F++L  CL +N   D  + + ++++  G  PD   ++ LI  F + GRV     +
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +   C +P+ ++F + +KGLC   R  +A  L  +     C     T+N LI+ LC+
Sbjct: 407 LNSM--PC-SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ +FE+M     ++G  C P+ VTY+++I+GL ++G V+ A ELF  M     
Sbjct: 464 NGRVNNAIEVFEQMP----KYG--CTPDIVTYSSLINGLSEQGLVESAIELFQSMP---C 514

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+  Y +V++G C A  W +A  L   M  +   P+ +TF+++++ LC+ G +D+A  
Sbjct: 515 KPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIE 574

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E M   G  P+ +TYN LI+G+    ++D AR+L  +M    C  D VSYN+ +   C
Sbjct: 575 VFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMS---CKPDAVSYNSALKGLC 631

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTY---NTLFL 436
           + +  +EA  + +EML     P  VT+   N LF+
Sbjct: 632 RAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFV 666



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 193/368 (52%), Gaps = 18/368 (4%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           ++ T++ LIN +C+ GR++    ++  +      P+  T+ +++ GLC   +  +A AL 
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +     C P+  T+ T I   C+ G    A+ L + M     ++G  C P+ V Y+T++
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMP----QYG--CTPDVVIYSTLV 289

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +G  ++G VD A EL   M      P+ + Y + ++G C A  W +  +L +EM+ +   
Sbjct: 290 NGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+  TFS++   LC+NG +D A  +LE M   G  P+   YNTLI  +    ++D A KL
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
             SM    C  DV+S+N  +   C+ +  ++A  L  +ML +      +T+N L   L +
Sbjct: 407 LNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             +V  A+++F++M +     D  TY++ I+GL + G V  A+ELF+++     + +I  
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFG 520

Query: 501 YNCLIDGL 508
           YN ++ GL
Sbjct: 521 YNAVLKGL 528



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 15/362 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N     L   + ++ V  L   +      P+  T S+L +C C+ G V     V
Sbjct: 312 PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEV 371

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ +    P+AV + +LI     + R+ +A  L        C PDV ++N  + GLCR
Sbjct: 372 LEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNS---MPCSPDVISFNAALKGLCR 428

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L  +M   +      C    +T+N +ID LC+ G V+ A E+F +M     
Sbjct: 429 AERWDDAEELIVQMLRED------CPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGC 482

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+VTY+S+I G         A  LF  M     +PD+  ++ ++  LC+  + + A  
Sbjct: 483 TPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGE 539

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L+  M  +   PN  T+N LI+  C    +D A ++F  M   G   D+ +YN LIN + 
Sbjct: 540 LISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFS 599

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   +++A  L S M     KP  V+YN+   GL    + + A ++  EM R     +  
Sbjct: 600 EQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEV 656

Query: 465 TY 466
           T+
Sbjct: 657 TF 658



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 46/358 (12%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           LIK LCA+ R+ +A  +    +  A   D  ++NTL+ G CR G          +     
Sbjct: 118 LIKKLCAQRRLADAERVLDALKA-AGAADPVSHNTLVAGYCRDGR-------LADAERLL 169

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
              G+    N VTY T+I+G C+ G +  A  L   M    + PD  TY +V+ G C A 
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGAR 226

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
            W +A+ L  EM+     P+ VTF+  +   C+NG +D+A +LL+ M   G  P+   Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 363 TLIDGY--------------------------------CLTDKIDHARKLFVSMESNGCM 390
           TL++G+                                C+  + +   +L V M    C+
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +  +++ L +  C+N  V+ A+ +  +M   G +P  V YNTL     E  +V+ ALKL
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + M     + D  ++N  + GLC++    +A EL   +      L  +++N LID L
Sbjct: 407 LNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSL 461


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 22/408 (5%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL     ++    + K +   G  PD  T++ +I   C+  RV   F++   + +    P
Sbjct: 426 CLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNP 485

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           +  T+T LI   C    I +A + F + R   C P+V TY  L++   ++     A ++F
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIF 545

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---------------K 280
             M       G  C PN +TY+ +IDGLCK G + KA E++ K+               K
Sbjct: 546 HRMV------GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGK 599

Query: 281 D-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           D + I+P+VVTY +++ G C A   ++A  L   M+  G +P+ + +  ++D  CK G++
Sbjct: 600 DTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEI 659

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D A  +   M   G  P+ +TY +LID      ++D A K+   M  + C  +VV+Y  +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           ++  CK  + E+AL+L S M  KG  P VVTY  L  GL +  +V+  L+LF +M+    
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           A +  TY   I+  C +G + +A  L   ++ + +   +  Y   + G
Sbjct: 780 APNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQG 827



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 204/439 (46%), Gaps = 43/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S++  +   L + K  D    LF+ +   G+ PD+YT++ILI+ FCK G +      
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  +  +PN VT+T+L+       ++ +A  +F +    AC P+  TY+ LI+GLC+
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCK 569

Query: 225 TGHTIVALNLFEEMANGN----------GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
            G    A  ++ ++   +          G+      PN VTY  +++GLCK   V  A +
Sbjct: 570 AGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHD 629

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M      P+ + Y +++ GFC   + + A+ +F+ M   G  P V T++ ++D + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K+G++D A ++L  M+    NPN  TY  ++DG C T + + A  L   ME  GC  +VV
Sbjct: 690 KDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVV 749

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF-------------LGLFEI 441
           +Y  LI+   K   V+  L L+ +M +KG  P  VTY  L              L L E+
Sbjct: 750 TYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEM 809

Query: 442 HQVE--------------------RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            Q                       +L L +EM  +  A     Y   ID   K+G +  
Sbjct: 810 KQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLET 869

Query: 482 ALELFRAIRDSKYELNIVS 500
           ALEL + + +    LN+ S
Sbjct: 870 ALELHKEMMEVSSSLNMAS 888



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 205/438 (46%), Gaps = 29/438 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I + M+    +P P S FN L       + Y     LF R+N+ G  P    ++I I   
Sbjct: 328 IINMMMTEGCNPSP-SLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI 386

Query: 153 CKMGRVSHGFV------VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           C    + +  +      V   +L +    N +   +  + LC   +  +A  +  +    
Sbjct: 387 CGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK 446

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD  TY  +I  LC+      A  LF+EM        V   P+  TY  +ID  CK 
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK------VGVNPDVYTYTILIDSFCKA 500

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A+  F +M+    +P+VVTYT+++  +  +    +A  +F  M+     P+ +T+
Sbjct: 501 GLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITY 560

Query: 327 SVIMDELCKNGKMDKASRLLELMI-----------WRG-----VNPNTYTYNTLIDGYCL 370
           S ++D LCK G++ KA  +   +I           + G     ++PN  TY  L++G C 
Sbjct: 561 SALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCK 620

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+  A  L  +M + GC  + + Y+ L++ +CK  +++ A  ++  M   G  P+V T
Sbjct: 621 AQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHT 680

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y +L   +F+  +++ A+K+  +M ++    +  TY   +DGLCK+G   +AL L   + 
Sbjct: 681 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLME 740

Query: 491 DSKYELNIVSYNCLIDGL 508
                 N+V+Y  LIDGL
Sbjct: 741 KKGCSPNVVTYTALIDGL 758



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 198/457 (43%), Gaps = 60/457 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR------- 157
           P   ++N L   LA     +    + K ++++G   D  T        CK GR       
Sbjct: 202 PSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL 261

Query: 158 -------------------------VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
                                     +     L R+  + + PN VT+ +L+ G   + +
Sbjct: 262 LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQ 321

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           +     +        C P    +N+L++  C       A  LF  M N  G     C P 
Sbjct: 322 LGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRM-NTCG-----CPPG 375

Query: 253 TVTYNTIIDGLCKEG------FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
            V YN  I  +C          +D A++++ +M   +   + +   +  R  C    + +
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A ++  EMM +G  PD  T++ ++  LC+  ++DKA  L + M   GVNP+ YTY  LID
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            +C    I+ A+  F  M S GC  +VV+Y  L++ Y K+K + +A  ++  M+     P
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP 555

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTY--------------TYNNFI 470
             +TY+ L  GL +  ++++A +++ ++    +++ +D Y              TY   +
Sbjct: 556 NAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALV 615

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +GLCK+  V +A +L  A+  +  E N + Y+ L+DG
Sbjct: 616 NGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDG 652



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 175/378 (46%), Gaps = 28/378 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K +       L   + +AG  P+   +  L++ FCK+G +     V
Sbjct: 606 PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+ +  + P+  T+TSLI  +  + R+  A  + ++    +C P+V TY  +++GLC+
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCK 725

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           TG T  ALNL   M          C PN VTY  +IDGL K G VD   ELF++MK +  
Sbjct: 726 TGETEKALNLLSLMEKKG------CSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-------QGVQPDVVTFSVIMDELCKNG 337
            P+ VTY  +I   C A   ++A  L  EM         QG +  V  FS          
Sbjct: 780 APNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFS---------K 830

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS-- 395
           +   +  LLE M      P    Y  LID +    +++ A +L   M       ++ S  
Sbjct: 831 RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD 890

Query: 396 -YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            + +LI   C +  VEEA++LYSEM  +GI P +  +  L  GL E ++   AL+L   +
Sbjct: 891 MHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGI 950

Query: 455 RRNHVAADTYTYNNFIDG 472
            +  V    +  N F DG
Sbjct: 951 CQEGV---NWEGNKFCDG 965



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 179/446 (40%), Gaps = 72/446 (16%)

Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
           +   L    RL   G  P   T++ L+      G+V   F V   +  S F  +  T  S
Sbjct: 185 WGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGS 244

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
             + LC E R  +A  L  +      + D      +I+GL        A++    M    
Sbjct: 245 FAQALCKEGRWGDALDLLEREDF---KLDTVLCTQMISGLMEASLFNEAMSFLHRMR--- 298

Query: 243 GEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                 C    PN VTY T++ G  K+  +   K +   M  E  NP    + S++  +C
Sbjct: 299 ------CNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYC 352

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN----------------------- 336
            A D+  A +LF  M   G  P  V +++ +  +C                         
Sbjct: 353 NAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVAS 412

Query: 337 ------------------GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
                             GK +KA ++++ M+ +G  P+  TY  +I   C   ++D A 
Sbjct: 413 CVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAF 472

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            LF  M+  G   DV +Y  LI+ +CK   +E+A S + EM S G  P VVTY  L    
Sbjct: 473 LLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAY 532

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-- 496
            +  Q+ +A  +F  M  +    +  TY+  IDGLCK+G + +A E++  +  +   +  
Sbjct: 533 LKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIES 592

Query: 497 --------------NIVSYNCLIDGL 508
                         N+V+Y  L++GL
Sbjct: 593 DFYFEGKDTDTISPNVVTYGALVNGL 618



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 157/383 (40%), Gaps = 61/383 (15%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VLGR+L             L++  C +    EA     + + F   P   TYN L+  L 
Sbjct: 167 VLGRLL-----------NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLA 215

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G   +A  + +EM+         C   + T  +    LCKEG    A +L   ++ E+
Sbjct: 216 SAGQVEMAFRVQKEMSASG-----FCMDRS-TVGSFAQALCKEGRWGDALDL---LERED 266

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D V  T +I G   A+ +NEA      M      P+VVT+  ++    K  ++    
Sbjct: 267 FKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCK 326

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R++ +M+  G NP+   +N+L+  YC  +   +A KLF  M + GC    V YN  I   
Sbjct: 327 RIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI 386

Query: 404 CKNKDV-----------------------------------------EEALSLYSEMLSK 422
           C  +++                                         E+A  +  EM+ K
Sbjct: 387 CGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK 446

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P   TY  +   L +  +V++A  LF EM++  V  D YTY   ID  CK+G + +A
Sbjct: 447 GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQA 506

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
              F  +R +    N+V+Y  L+
Sbjct: 507 QSWFDEMRSAGCSPNVVTYTALL 529



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 8/246 (3%)

Query: 267 GFVDKAK--ELFLKMKDENINPDVVT--YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           GF D A+  E  L+   E+ + DV+      ++R  C    W EA      + D G +P 
Sbjct: 145 GFEDPARTAERLLREIGED-DRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPS 203

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            VT++ ++  L   G+++ A R+ + M   G   +  T  +     C   +   A  L  
Sbjct: 204 AVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL-- 261

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            +E      D V    +I+   +     EA+S    M      P VVTY TL  G  +  
Sbjct: 262 -LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKK 320

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           Q+    ++ + M           +N+ +   C +     A +LF  +         V YN
Sbjct: 321 QLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYN 380

Query: 503 CLIDGL 508
             I  +
Sbjct: 381 IFIGSI 386


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 212/420 (50%), Gaps = 8/420 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           TP  AL + D M      P  V  +N L     +    D    +   +  AG+ P++ T+
Sbjct: 185 TP-AALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +  I  +C+   V   F +   ++R+    + VT ++L+ GLC + R  EA ALF +   
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P+  TY TLI+ L + G     L+L  EM +     GVV   + VTY  ++D L K
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLVTYTALMDWLGK 356

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G  D+ K+       +N++P+ VTYT +I   C A++ +EA+++ +EM ++ + P+VVT
Sbjct: 357 QGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS +++   K G +DKA+    +M  RG+NPN  TY TLIDG+      D A +++  M 
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   +    ++L+N   +N  +EEA++L+ +    G+    V Y TL  GLF+   + 
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K   E+   ++  D   YN FI+ LC  G   EA      +R+   + +  +YN +I
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 218/487 (44%), Gaps = 39/487 (8%)

Query: 47  TTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALC-----------IFD 95
            T+     ++R    D ASL   L   C+      + L+ P  AL            I  
Sbjct: 57  ATSGLAAAAIRFRPADPASLNALLYSHCR------LRLLRPAIALLRSSRPTTVAYNILL 110

Query: 96  YMLRMHPSPPPV-------------SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP-D 141
             L  H   P V              + N L   L +N   D   +L  R    G+   D
Sbjct: 111 AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALD 168

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   + LI  +C++G       V  R+       + V + +L+ G C   ++  A  +  
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +    +P+V TY   I   CRT     A +L+E M       GV+   + VT + ++ 
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVA 282

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC++G   +A  LF +M      P+ VTY ++I     A    E   L  EM+ +GV  
Sbjct: 283 GLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D+VT++ +MD L K GK D+    L   +   ++PN  TY  LID  C    +D A ++ 
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + ME      +VV+++++IN + K   +++A      M  +GI P VVTY TL  G F+ 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
              + AL+++ +M    V  + +  ++ ++GL ++G + EA+ LF+    S   L+ V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 502 NCLIDGL 508
             LIDGL
Sbjct: 523 TTLIDGL 529



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 6/395 (1%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L +N   +  ++LFK  + +GL  D   ++ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+AV +   I  LC   +  EA +  T+ R    +PD  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM   +       KPN +TYNT++ GL   G V+KAK L  +M     +P  +T+ 
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            V++    +   +    +   MM+ G+  D+  ++ ++  LC +G   KA+ +LE M+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+T T+N LI G+C +  +D+A   +  M       ++ ++NTL+        + EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            ++  EM   G++P  +TY+ L  G  +      A++L+ EM          TYN  I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             K+G + +A ELF+ ++         +Y+ L+ G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 190/429 (44%), Gaps = 29/429 (6%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L K    D V    +   S  L P+  T+++LI+  CK   V     VL  +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                +PN VTF+S+I G      + +A       +     P+V TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 229 IVALNLFEEM---------------ANG---NGEF-----------GVVCKPNTVTYNTI 259
             AL ++ +M                NG   NG+            G     + V Y T+
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGL K G +  A +   ++ D N+ PD V Y   I   C    + EAK    EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +PD  T++ ++   C+ G+  KA +LL  M    + PN  TYNTL+ G   T  ++ A+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M S G     +++  ++    +++ ++  L ++  M++ G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                 +A  + +EM  + +A DT T+N  I G CKS  +  A   +  +       NI 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 500 SYNCLIDGL 508
           ++N L+ GL
Sbjct: 766 TFNTLLGGL 774



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 182/403 (45%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F+ +     K    D      + +   G+ P++ T+  LI+ F K         V
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L      N     SL+ GL    +I EA ALF          D   Y TLI+GL +
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A    +E+ + N        P+ V YN  I+ LC  G   +AK    +M++  +
Sbjct: 532 AGDMPTAFKFGQELMDRN------MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY ++I   C   +  +A +L  EM    ++P+++T++ ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+  G +P++ T+  ++     + ++D    +   M + G   D+  YNTL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +    +A  +  EML  GI P  +T+N L LG  +   ++ A   + +M   +++ +  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T+N  + GL   G + EA  +   +  S  E N ++Y+ L  G
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATG 808



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 6/383 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+   CL     +    S    + + GL PD  T++ +I   C+ G  +    +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  S   PN +T+ +L+ GL     + +A  L  +       P   T+  ++    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +    V L++ E M N           +   YNT++  LC  G   KA  +  +M    I
Sbjct: 672 SRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+ ++I G C ++  + A   + +M+ Q + P++ TF+ ++  L   G++ +A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M   G+ PN  TY+ L  G+        A +L+  M   G +  V +YN LI+ + 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L+ +M  +G+ PT  TY+ L  G   I       K   +M+    +    
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 465 TYNNFIDGLCKSGFVLEALELFR 487
           T +       K G   +A  L +
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLK 928



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 7/289 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+    SP  ++   +L  C ++++  D +L + + + +AGL  DI  ++ L+   
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQAC-SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G      VVL  +L S   P+ +TF +LI G C  S +  A A + +       P++
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NTL+ GL   G    A  +  EM     E      PN +TY+ +  G  K+    +A
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE------PNNLTYDILATGHGKQSNKVEA 818

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L+ +M  +   P V TY ++I  F  A    +AK LF +M  +GV P   T+ +++  
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
             +     +  + L+ M  +G +P+  T + +   +        A++L 
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 211/409 (51%), Gaps = 7/409 (1%)

Query: 101 HPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP     V  FN+L     +N      + L + + + G  PDI T++ L+N FCK+G + 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               ++G I      PN +T+T+LI   C    + +A  ++ +  V +  PDV TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NGLC++G    A ++F EM     E GVV  PN  +Y T+ID L KEG V +A  L  +M
Sbjct: 130 NGLCKSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRM 183

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               I  DVV YT+++ G   A   N A+ +F  ++++ + P+ VT+S ++D  CK G +
Sbjct: 184 VVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDV 243

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           +K   LL+ M  + + PN   Y++++DGY     ++ A  +   M     + +V  Y TL
Sbjct: 244 NKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ Y K      AL L+ EM S+G++      ++    L    ++E A +LF +M    +
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D   Y + +DG  K+G   +A  + + + +     ++V+YN LI+GL
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 202/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K++  +  L ++  +    L PD+ T++ ++N  CK G+V     V
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN  ++ +LI  L  E  + EA  L  +  V     DV  Y  L++GL +
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A ++F+ +     E  +V  PN VTY+ +IDG CK G V+K + L  +M++++I
Sbjct: 205 AGMANNAEDMFQVLL----EESLV--PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+ Y+S++ G+      NEA  +  +M+ + + P+V  +  ++D   K  +   A  
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  RG+  N +  ++ ++    + +++ A +LF  M S G + D V+Y ++++ + 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     +A ++  EM  K     VV YN L  GLF++ + E        MR+  +A D+ 
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSA 437

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T+N  I+  CK G +  AL+L   ++    + N ++ N L+  L
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 198/418 (47%), Gaps = 8/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ +   M++ +  P  V  +  L     K       L LFK + S GL  + +    
Sbjct: 279 NEAMDVMRKMVQRNILPN-VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDS 337

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +N   + GR+     +   ++     P+ V +TS++ G     +  +A  +  +    +
Sbjct: 338 FVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              DV  YN LINGL + G        +E  +   G   +   P++ T+NT+I+  CKEG
Sbjct: 398 SGFDVVAYNVLINGLFKLGK-------YESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +L  +MK   + P+ +T   +++  C A +  +   L  +M+  G  P   T  
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK 510

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K+ + D    + + ++  GV  +  TYNTLI  +C    I  A  +F  M   
Sbjct: 511 AVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK 570

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+++YN LI+ YC +  +++A +++S+ML++G+ P V TYN L  GL     ++ A
Sbjct: 571 GILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L ++M+   +  +  TY+  + G  K G + E ++L+  +    +     +YN LI
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 200/437 (45%), Gaps = 42/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +  L   L K    +    +F+ L    L P+  T+S LI+  CK+G V+ G ++L 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN + ++S++ G   +  + EA  +  K       P+VF Y TLI+G  +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              +AL+LF+EM +   E       N    ++ ++ L + G +++A ELF  M    + P
Sbjct: 312 QRGIALDLFKEMKSRGLE------ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YTS++ GF  A   ++A  +  EM ++    DVV ++V+++ L K GK +  S   
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES-FH 424

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G+ P++ T+NT+I+ YC    + +A KL   M+S G   + ++ N L+   C  
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 407 KDVEEALSLYSEMLSKGIKPT-----------------------------------VVTY 431
            ++E+ + L ++ML  G  PT                                   + TY
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTY 544

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL      +  + RA  +F +M    + AD  TYN  I G C S  + +A  +   +  
Sbjct: 545 NTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT 604

Query: 492 SKYELNIVSYNCLIDGL 508
                N+ +YN L+ GL
Sbjct: 605 EGVSPNVETYNILLGGL 621



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 189/391 (48%), Gaps = 7/391 (1%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L ++   +    LFK + S GL PD   ++ +++ F K G+ S  F +   +       +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V +  LI GL    +  E+ +  T  R     PD  T+NT+IN  C+ G+   AL L  
Sbjct: 402 VVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM +    +G+  KPN++T N ++  LC  G ++K  +L   M     +P   T+ +V+ 
Sbjct: 461 EMKS----YGL--KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
               +   +    +  +++  GV+ D+ T++ ++   C+ G + +A+ + + M+ +G+  
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  TYN LI GYC++  +  A  +   M + G   +V +YN L+      + ++EA  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           ++M  +G+ P   TY+ L  G  +I  ++  +KL+ EM        T TYN  I    K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             + +A EL + ++      N  +Y+ LI G
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICG 725



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 178/361 (49%), Gaps = 21/361 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N+L   L K   Y++  S    +   GL PD  T + +IN +CK G + +   +L 
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN++T   L++ LCA   I +   L     V    P   T+  +++   ++ 
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              V L++ +++       G+  K +  TYNT+I   C+ G + +A  +F  M  + I  
Sbjct: 521 RADVILHMHDQLV------GMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D++TY ++I G+C ++   +A  +  +M+ +GV P+V T+++++  L     + +A+ L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG+ PN  TY+ L+ G+     +    KL+  M + G +    +YN LI+ + K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI-------------HQVERALKLFDE 453
           K + +A  L  EM  +GI P   TY+ L  G +++             +Q E A +LF+E
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE-AKRLFEE 753

Query: 454 M 454
           M
Sbjct: 754 M 754



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 182/403 (45%), Gaps = 7/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +     K    +  + + +++    + P+++ +  LI+ + K  +      +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N     S +  L    R+ EA  LF         PD   Y ++++G  +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A N+ +EM   +  F VV       YN +I+GL K G  + ++     M+   +
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVA------YNVLINGLFKLGKYE-SESFHTGMRQLGL 432

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+ ++I  +C   +   A +L  EM   G++P+ +T ++++  LC  G+++K   
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+  G +P   T+  ++D    + + D    +   +   G   D+ +YNTLI+ +C
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   +  A  ++ +M+ KGI   ++TYN L  G      +++A  +  +M    V+ +  
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  + GL  +  + EA  L   +++     N  +Y+ L+ G
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 24/270 (8%)

Query: 95  DYMLRMHPS------PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           D +L MH           +S++N L     +         +FK +   G+  DI T++ L
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +C    +   F V  ++L    +PN  T+  L+ GL A   I EAA L  + +    
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY+ L++G  + G+    + L+ EM       G V  P T TYN +I    K   
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTRTYNVLISCFAKGKK 696

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW------------NEAKRLFIEMMD 316
           + +AKEL  +M+   I P+  TY  +I G+   +               EAKRLF EM +
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +G  P   T + I   L K GK   A R+L
Sbjct: 757 KGFIPCENTLACISFTLAKPGKKADAQRIL 786


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 170/293 (58%), Gaps = 8/293 (2%)

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA------NGNGEFGVVCKPNTVTYNTII 260
            C P+V T+NTL+N LCR G  + AL L + M       N  G+  +  K + V    I+
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHI--KADVVISTAIV 62

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           D LCK+G    A+ LF +M ++ I P+V+TY  +I  FC++  W++A +L   M+++ + 
Sbjct: 63  DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 122

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD+VTFS +++   K  K+ +A  + + M+   + P T TYN++IDG+C  D++D A+++
Sbjct: 123 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 182

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
             SM S GC  DVV+++TLIN YCK K V+  + ++ EM  +GI    VTY TL  G  +
Sbjct: 183 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 242

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  ++ A  L +EM    VA D  T++  + GLC    + +A  +   ++ S+
Sbjct: 243 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 295



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 168/295 (56%), Gaps = 16/295 (5%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP----------DVFTYNTLINGLCR 224
           PN VTF +L+  LC E R++EA AL  +      +P          DV     +++ LC+
Sbjct: 8   PNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCK 67

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+ I A NLF EM     E G+   PN +TYN +ID  C  G    A +L   M ++ I
Sbjct: 68  DGNHINAQNLFTEMH----EKGIF--PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI 121

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPD+VT++++I  F      +EA+ ++ EM+   + P  +T++ ++D  CK  ++D A R
Sbjct: 122 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 181

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ M  +G +P+  T++TLI+GYC   ++D+  ++F  M   G + + V+Y TLI+ +C
Sbjct: 182 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 241

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           +  D++ A  L +EM+S G+ P  +T++ +  GL    ++ +A  + ++++++ V
Sbjct: 242 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEV 296



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 150/270 (55%), Gaps = 10/270 (3%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP----------DVVTYTSVIRGF 298
           C+PN VT+NT+++ LC+EG V +A  L  +M +E   P          DVV  T+++   
Sbjct: 6   CRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRL 65

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C   +   A+ LF EM ++G+ P+V+T++ ++D  C +G+   A +LL  MI + +NP+ 
Sbjct: 66  CKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 125

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            T++ LI+ +    K+  A +++  M         ++YN++I+ +CK   V++A  +   
Sbjct: 126 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 185

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M SKG  P VVT++TL  G  +  +V+  +++F EM R  + A+T TY   I G C+ G 
Sbjct: 186 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 245

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  A +L   +       + ++++C++ GL
Sbjct: 246 LDAAQDLLNEMISCGVAPDYITFHCMLAGL 275



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 153/305 (50%), Gaps = 16/305 (5%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA----------VTFTSLIKG 186
           G  P++ T + L+N  C+ GRV     ++ R++     PNA          V  T+++  
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC +   + A  LFT+       P+V TYN +I+  C +G    A  L   M        
Sbjct: 65  LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ---- 120

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               P+ VT++ +I+   KE  V +A+E++ +M   +I P  +TY S+I GFC  +  ++
Sbjct: 121 --INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 178

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AKR+   M  +G  PDVVTFS +++  CK  ++D    +   M  RG+  NT TY TLI 
Sbjct: 179 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 238

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C    +D A+ L   M S G   D ++++ ++   C  K++ +A ++  ++    + P
Sbjct: 239 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP 298

Query: 427 TVVTY 431
            ++ +
Sbjct: 299 RLIFF 303



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 15/268 (5%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNI---------LFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           EAL + D M+     P  +   +I         +   L K+ ++    +LF  ++  G+F
Sbjct: 28  EALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF 87

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T++ +I+ FC  GR S    +L  ++     P+ VTF++LI     E ++ EA  +
Sbjct: 88  PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 147

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           + +   ++  P   TYN++I+G C+      A  + + MA+        C P+ VT++T+
Sbjct: 148 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG------CSPDVVTFSTL 201

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           I+G CK   VD   E+F +M    I  + VTYT++I GFC   D + A+ L  EM+  GV
Sbjct: 202 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 261

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLE 347
            PD +TF  ++  LC   ++ KA  +LE
Sbjct: 262 APDYITFHCMLAGLCSKKELRKAFAILE 289



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 10/240 (4%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP----------DVVTFSV 328
           M +    P+VVT+ +++   C      EA  L   M+++G QP          DVV  + 
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+D LCK+G    A  L   M  +G+ PN  TYN +ID +C + +   A +L   M    
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D+V+++ LIN + K + V EA  +Y EML   I PT +TYN++  G  +  +V+ A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++ D M     + D  T++  I+G CK+  V   +E+F  +       N V+Y  LI G 
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 6/222 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +      +  +     L + +    + PDI T S LIN F K  +VS    +
Sbjct: 88  PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 147

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LR    P  +T+ S+I G C + R+ +A  +        C PDV T++TLING C+
Sbjct: 148 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 207

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  + +F EM       G+V   NTVTY T+I G C+ G +D A++L  +M    +
Sbjct: 208 AKRVDNGMEIFCEMHRR----GIV--ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 261

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            PD +T+  ++ G C   +  +A  +  ++    V P ++ F
Sbjct: 262 APDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFF 303


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L   L K++     ++L+ ++  AG+ P I T+  L+  +C+ GR+     +
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +    F PN VT+T+L+KG   +     A AL  + R        +TYN LINGL  
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL-- 510

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             + +  +   +EM       G V  P T+TYN+II+G  K G +  A  ++ +M+ + I
Sbjct: 511 --YMVNRVCEVDEMLKRFLSEGFV--PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTYTS I G+C  N  + A +L I +   G+QPD+  ++  +D  CK G M +A  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L L++  G+ P+   YN+ + GY     +  A K + SM     + D   Y TLI+ + 
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +V  AL LYSEM++  + P   T+  L  GL     ++ A +L D+MRR  V+ +  
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           TYN  I+   + G + EA +L   +  S    +  +Y+ L
Sbjct: 747 TYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 197/407 (48%), Gaps = 21/407 (5%)

Query: 115 GCLAKNKHYDTVLS-------------LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           GC A  K YD V+              LF  +  AG+ PD   ++I I+  CK+      
Sbjct: 180 GCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRA 239

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP-DVFTYNTLIN 220
             VLG++  + F P  +T++S++  L    R+ EA  L  +  +   +  DV     L++
Sbjct: 240 LQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMH 299

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G C  G    AL+LF+E+ +     GV   P  VTY  +I G   EG  D+  +L  +M 
Sbjct: 300 GYCLHGEVGKALDLFDEVVSD----GVT--PTNVTYGVLIKGCDAEGMSDETYKLCRQMI 353

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           ++ +      +  VI+G      W +A  L   ++D GV PDV T+  ++  LCK+ K+ 
Sbjct: 354 EQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLH 412

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A  L + M   GV P+  TY++L+ GYC   ++D A KL+  M   G   + V+Y TL+
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLM 472

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
             Y K K  + A +L +EM   G+     TYN L  GL+ +++V    ++          
Sbjct: 473 KGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV 532

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             T TYN+ I+G  K+G +  A  ++R +R      NIV+Y   IDG
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDG 579



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 188/398 (47%), Gaps = 7/398 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN++   L ++K +   + L + +   G+ PD++T+  LI+  CK  ++     +  ++ 
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            +   P+ VT+ SL+ G C + R+ EA  L+++       P+  TY TL+ G  +     
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFD 482

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  L  EM       GV C     TYN +I+GL     V +  E+  +   E   P  +
Sbjct: 483 NAYALLNEMRQN----GVSC--GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY S+I GF  A     A  ++ +M  +G+ P++VT++  +D  C+    D A +LL  +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G+ P+   YN  ID +C    +  A    V +  +G   DV  YN+ +  Y   K +
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMM 656

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            EA   Y  M+ + +      Y TL  G  ++  V  AL+L+ EM  NHV  D  T+   
Sbjct: 657 AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             GLC+SG +  A  L   +R      NIV+YN LI+ 
Sbjct: 717 THGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINA 754



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 8/399 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +AL +FD ++    +P  V+   ++ GC A+    D    L +++   GL    Y  ++
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMS-DETYKLCRQMIEQGLLLSTYEFNL 366

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I    +  R      +L  ++ +   P+  T+  LI  LC   ++ EA  L+ K +   
Sbjct: 367 VIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P + TY++L+ G C  G    AL L+ EM +          PN VTY T++ G  K+ 
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG------FPPNEVTYTTLMKGYIKKK 479

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D A  L  +M+   ++    TY  +I G    N   E   +    + +G  P  +T++
Sbjct: 480 AFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYN 539

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            I++   K G M  A  +   M  +G+ PN  TY + IDGYC T+  D A KL + +  +
Sbjct: 540 SIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRD 599

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+ +YN  I+ +CK  ++  AL     +L  G+ P V  YN+   G   +  +  A
Sbjct: 600 GIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEA 659

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            K +  M +  V ADT  Y   IDG  K G V  ALEL+
Sbjct: 660 SKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELY 698



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 188/400 (47%), Gaps = 8/400 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKR-LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +++ +   L K    D  L L  + L + G   D+   ++L++ +C  G V     +   
Sbjct: 257 TYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDE 316

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++    TP  VT+  LIKG  AE    E   L  +          + +N +I GL R   
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKR 376

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A+ L E +     + GV   P+  TY  +I  LCK   + +A  L+ KMK+  + P 
Sbjct: 377 WKDAIGLLELVV----DTGV---PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPS 429

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           +VTY S++ G+C     +EA +L+ EM D+G  P+ VT++ +M    K    D A  LL 
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLN 489

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   GV+   YTYN LI+G  + +++    ++     S G +   ++YN++IN + K  
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAG 549

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  A  +Y +M  KGI P +VTY +   G    +  + A+KL   +RR+ +  D   YN
Sbjct: 550 MMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYN 609

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            FID  CK G +  AL     +       ++  YN  + G
Sbjct: 610 AFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 167/377 (44%), Gaps = 41/377 (10%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R++     P+A + T L+      +   +A  LF + R   C  D   Y+ +I    R G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ LF+EMA      G   KP+   Y   I GLCK    D+A ++  KM++    P
Sbjct: 200 MHCDAVRLFDEMA------GAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEP 253

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEM-MDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
             +TY+SV+         +EA RL  +M +  G + DVV  +++M   C +G++ KA  L
Sbjct: 254 WELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDL 313

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM--------------- 390
            + ++  GV P   TY  LI G       D   KL   M   G +               
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLR 373

Query: 391 -------------------HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                               DV +Y  LI+W CK++ + EA++L+ +M   G+KP++VTY
Sbjct: 374 DKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           ++L LG  E  +++ ALKL+ EM       +  TY   + G  K      A  L   +R 
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493

Query: 492 SKYELNIVSYNCLIDGL 508
           +       +YN LI+GL
Sbjct: 494 NGVSCGDYTYNILINGL 510



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 1/234 (0%)

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           + +M    + PD  + T ++          +A  LF EM  +G   D   + V++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G    A RL + M   GV P+   Y   I G C     D A ++   M   G     ++
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEM 454
           Y+++++   K   ++EAL L  +ML    K   V   T+ +  + +H +V +AL LFDE+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             + V     TY   I G    G   E  +L R + +    L+   +N +I GL
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 200/405 (49%), Gaps = 14/405 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L     K    +    LF  L   G  P + T+  +IN FCK G     F  
Sbjct: 237 PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKG----DFKA 292

Query: 165 LGRILRSC----FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           + R+L        T N   + ++I        I++A           C+PD+ TYNTLI+
Sbjct: 293 IDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLIS 352

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           G CR G    A  L E+ A G G       PN  +Y  +I   CK+G  D+A    ++M 
Sbjct: 353 GSCRDGKVSEADQLLEQ-ALGKGLM-----PNKFSYTPLIHAYCKQGGYDRASNWLIEMT 406

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +    PD+VTY +++ G   A + + A  +  +M+++GV PD   ++++M  LCK  K+ 
Sbjct: 407 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 466

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A  LL  M+ + V P+ + Y TL+DG+     +D ARKLF      G    +V YN +I
Sbjct: 467 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 526

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
             YCK   +++A++  + M  + + P   TY+T+  G  + H ++ A K+F EM +    
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            +  TY + I+G C+ G +  +L++FR ++      N+V+Y+ LI
Sbjct: 587 PNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILI 631



 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 221/457 (48%), Gaps = 43/457 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAK-------NKHYDTVLSLFKRLNSAG-LFP 140
           +AL ++ ++L+ +   P V + N L   L K        K YD +L     ++ AG    
Sbjct: 147 KALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEML----EIDGAGDRCV 202

Query: 141 DIYTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           D Y+  I++   CK G++  G  ++  R  + C  PN + + +LI G C +  +  A  L
Sbjct: 203 DNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCI-PNIIFYNTLIDGYCKKGDMEMANGL 261

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN----------------- 242
           F + ++    P V TY  +ING C+ G       L  EM +                   
Sbjct: 262 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321

Query: 243 ------------GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
                       G     CKP+ VTYNT+I G C++G V +A +L  +   + + P+  +
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YT +I  +C    ++ A    IEM ++G +PD+VT+  ++  L   G++D A  + E M+
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 441

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RGV P+   YN L+ G C   K+  A+ L   M     + D   Y TL++ + +N +++
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLD 501

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           EA  L+   + KG+ P +V YN +  G  +   ++ A+   + M++ H+A D +TY+  I
Sbjct: 502 EARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVI 561

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           DG  K   +  A ++FR +   K + N+V+Y  LI+G
Sbjct: 562 DGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLING 598



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 195/410 (47%), Gaps = 6/410 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L++    P V ++  +     K   +  +  L   +NS GL  ++  ++ +I+   K G 
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +      +  ++     P+ VT+ +LI G C + ++ EA  L  +       P+ F+Y  
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 384

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+  C+ G    A N   EM           KP+ VTY  ++ GL   G VD A  +  
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGH------KPDLVTYGALVHGLVVAGEVDVALTIRE 438

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           KM +  + PD   Y  ++ G C       AK L  EM+DQ V PD   ++ ++D   +NG
Sbjct: 439 KMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNG 498

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
            +D+A +L EL I +G+NP    YN +I GYC    +  A      M+      D  +Y+
Sbjct: 499 NLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYS 558

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           T+I+ Y K  D++ A  ++ EM+    KP VVTY +L  G      + R+LK+F EM+  
Sbjct: 559 TVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQAC 618

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  +  TY+  I   CK   +++A   F  +  +K   N V++N L++G
Sbjct: 619 GLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNG 668



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 6/371 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N +     K+ H    +   + +   G  PDI T++ LI+  C+ G+VS    +L 
Sbjct: 309 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 368

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           + L     PN  ++T LI   C +     A+    +      +PD+ TY  L++GL   G
Sbjct: 369 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 428

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              VAL + E+M     E GV   P+   YN ++ GLCK+  +  AK L  +M D+++ P
Sbjct: 429 EVDVALTIREKML----ERGVF--PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 482

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D   Y +++ GF    + +EA++LF   +++G+ P +V ++ ++   CK G M  A   +
Sbjct: 483 DAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 542

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  R + P+ +TY+T+IDGY     +D A+K+F  M    C  +VV+Y +LIN +C+ 
Sbjct: 543 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D+  +L ++ EM + G+ P VVTY+ L     +  ++  A   F+EM  N    +  T+
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTF 662

Query: 467 NNFIDGLCKSG 477
           N  ++G  K+G
Sbjct: 663 NYLVNGFSKNG 673



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 204/425 (48%), Gaps = 14/425 (3%)

Query: 90  ALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
            L  FD++ R   S P    +++ L   LA+++ +  +  + + +    + P     SI+
Sbjct: 76  GLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIV 135

Query: 149 INCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           I  +   G V     +   +L++  + P+ +   SL+  L    RI  A  L+ +     
Sbjct: 136 IQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEID 195

Query: 208 CEPD--VFTYNT--LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
              D  V  Y+T  ++ GLC+ G       L E+       +G  C PN + YNT+IDG 
Sbjct: 196 GAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIED------RWGQGCIPNIIFYNTLIDGY 249

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK+G ++ A  LF+++K +   P V TY ++I GFC   D+    RL +EM  +G+  +V
Sbjct: 250 CKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNV 309

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
             ++ I+D   K+G + KA   +E MI  G  P+  TYNTLI G C   K+  A +L   
Sbjct: 310 QVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ 369

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
               G M +  SY  LI+ YCK    + A +   EM  +G KP +VTY  L  GL    +
Sbjct: 370 ALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGE 429

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA-IRDSKYELNIVSYN 502
           V+ AL + ++M    V  D   YN  + GLCK  F L A +L  A + D     +   Y 
Sbjct: 430 VDVALTIREKMLERGVFPDAGIYNILMSGLCKK-FKLPAAKLLLAEMLDQSVLPDAFVYA 488

Query: 503 CLIDG 507
            L+DG
Sbjct: 489 TLVDG 493



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 181/387 (46%), Gaps = 20/387 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+  L     K   YD   +    +   G  PD+ T+  L++     G V     +
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTI 436

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L     P+A  +  L+ GLC + ++  A  L  +    +  PD F Y TL++G  R
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR 496

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  LFE       E G+   P  V YN +I G CK G +  A     +MK  ++
Sbjct: 497 NGNLDEARKLFELTI----EKGM--NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY++VI G+   +D + A+++F EM+    +P+VVT++ +++  C+ G + ++ +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M   G+ PN  TY+ LI  +C   K+  A   F  M  N C+ + V++N L+N + 
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670

Query: 405 KN--KDVEEA------------LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
           KN  + + E             L+ +  M+S G  P    YN++ + L +      AL+L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSG 477
            ++M       D+ ++   + G+C  G
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEG 757



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 159/338 (47%), Gaps = 11/338 (3%)

Query: 176 NAVTFTSLIKGLCAESRIM-EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           N   ++SL+K L A SR+  E   +    RV    P     + +I     +G    AL L
Sbjct: 93  NGFAYSSLLK-LLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALEL 151

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD--VVTYT 292
           +  +      F     P+ +  N++++ L K G ++ A++L+ +M + +   D  V  Y+
Sbjct: 152 YYFVLKTYTYF-----PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYS 206

Query: 293 S--VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           +  +++G C      E ++L  +   QG  P+++ ++ ++D  CK G M+ A+ L   + 
Sbjct: 207 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 266

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            +G  P   TY  +I+G+C         +L + M S G   +V  YNT+I+   K+  + 
Sbjct: 267 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIV 326

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           +A+     M+  G KP +VTYNTL  G     +V  A +L ++     +  + ++Y   I
Sbjct: 327 KAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLI 386

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              CK G    A      + +  ++ ++V+Y  L+ GL
Sbjct: 387 HAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 24/276 (8%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+   + M + H +P   +   ++ G   K    D    +F+ +      P++ T++ L
Sbjct: 537 DAMACINRMKKRHLAPDEFTYSTVIDG-YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSL 595

Query: 149 INCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           IN FC+ G +     +  R +++C   PN VT++ LI   C E+++++AA+ F +  +  
Sbjct: 596 INGFCRKGDLHRSLKIF-REMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNK 654

Query: 208 CEPDVFTYNTLINGLCRTGHTIVA--------------LNLFEEMANGNGEFGVVCKPNT 253
           C P+  T+N L+NG  + G   ++              LN F  M +          P +
Sbjct: 655 CVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDG------WAPRS 708

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             YN+I+  LC+ G    A +L  KM  +   PD V++ +++ G C      E K +   
Sbjct: 709 AAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSC 768

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            +++      V +S I+D+    G   +AS +L+ M
Sbjct: 769 NLNERELQIAVNYSSILDQYLPQGT-SEASVILQTM 803


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 207/424 (48%), Gaps = 11/424 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           + ++AL    +M+  H    P+S +FN L   L ++ ++D    +F  L S  +  D Y+
Sbjct: 104 STDQALTFLHHMI--HEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVL-DAYS 160

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
             I+I   C+ G    GF +L  +     +PN V +T+LI G C    +M A  LF K  
Sbjct: 161 FGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMD 220

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                P+  TY+ L+NG  + G       ++E M       G+V  PN   YN +I   C
Sbjct: 221 RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS----GIV--PNAYAYNCLISEYC 274

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
             G VDKA ++F +M+++ I   V+TY  +I G C    + EA +L  ++   G+ P++V
Sbjct: 275 NGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIV 334

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++++++  C  GKMD A RL   +   G++P   TYNTLI GY   + +  A  L   M
Sbjct: 335 TYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E        V+Y  LI+ + +    E+A  ++S M   G+ P V TY+ L  GL     +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNM 454

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + A KLF  +   H+  ++  YN  I G CK G    AL L   +  S    N+ S+ C 
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF-CS 513

Query: 505 IDGL 508
             GL
Sbjct: 514 TIGL 517



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 182/386 (47%), Gaps = 14/386 (3%)

Query: 128 SLFKRLNSAGLFPDI-YT--HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           SL  +L  A   P + YT  +  ++N +            L  ++     P + TF +L+
Sbjct: 72  SLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLM 131

Query: 185 KGLCAESRIMEAAALFT--KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
             L   +   +A  +F   K +V     D +++  +I G C  G+ +    L   +    
Sbjct: 132 CLLIRSNYFDKAWWIFNELKSKVVL---DAYSFGIMIKGCCEAGYFVKGFRLLAMLE--- 185

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
            EFG+   PN V Y T+IDG CK G V  AK LF KM    + P+  TY+ ++ GF    
Sbjct: 186 -EFGL--SPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQG 242

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
              E  +++  M   G+ P+   ++ ++ E C  G +DKA ++   M  +G+     TYN
Sbjct: 243 LQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYN 302

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G C   K   A KL   +   G   ++V+YN LIN +C    ++ A+ L++++ S 
Sbjct: 303 ILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G+ PT+VTYNTL  G  ++  +  AL L  EM    +A    TY   ID   +  +  +A
Sbjct: 363 GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKA 422

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
            E+   +  S    ++ +Y+ LI GL
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLIHGL 448



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 7/339 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  M R+   P P  ++++L     K         +++ +  +G+ P+ Y ++ LI+ +
Sbjct: 215 LFCKMDRLGLVPNP-HTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEY 273

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G V   F V   +         +T+  LI GLC   +  EA  L  K       P++
Sbjct: 274 CNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNI 333

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYN LING C  G    A+ LF ++ +          P  VTYNT+I G  K   +  A
Sbjct: 334 VTYNILINGFCDVGKMDTAVRLFNQLKSSG------LSPTLVTYNTLIAGYSKVENLAGA 387

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L  +M++  I P  VTYT +I  F   N   +A  +   M   G+ PDV T+SV++  
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHG 447

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC +G M +AS+L + +    + PN+  YNT+I GYC       A +L   M  +G + +
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           V S+ + I   C+++  +EA  L  +M++ G+KP+V  Y
Sbjct: 508 VASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 41/258 (15%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++NIL G L + K +   + L  ++N  GL P+I T++ILIN FC +G++     +  
Sbjct: 298 VMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFN 357

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK------------------------ 202
           ++  S  +P  VT+ +LI G      +  A  L  +                        
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417

Query: 203 HRVFACE-----------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
           +   ACE           PDV+TY+ LI+GLC  G+   A  LF+ +    GE  +  +P
Sbjct: 418 YTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSL----GEMHL--QP 471

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N+V YNT+I G CKEG   +A  L  +M    + P+V ++ S I   C    W EA+ L 
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531

Query: 312 IEMMDQGVQPDVVTFSVI 329
            +M++ G++P V  + ++
Sbjct: 532 GQMINSGLKPSVSLYKMV 549


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 211/409 (51%), Gaps = 22/409 (5%)

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
           K  D    L K +   G+ P ++ +++++   CK+ R+     +   +++    PN VT+
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-- 238
            +LI G C    I EA     + +    E ++ TYN+L+NGLC +G    A  +  EM  
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290

Query: 239 ----------------ANGNGEFGVV----CKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
                           +NG G+ G+      + +  TY  +++GLC+ G ++KA+E+  K
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           + +  + P  ++Y  ++  +C   D  +A     +M ++G++P+ +TF+ ++ + C+ G+
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D A   +  M+ +GV+P   TYN+LI+GY          +    M+  G   +V+SY +
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           LIN  CK++ + +A  + ++M+ +G+ P    YN L      + +++ A + FDEM ++ 
Sbjct: 471 LINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG 530

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + A   TYN  I+GL ++G V +A +LF  +       ++++YN LI G
Sbjct: 531 IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 216/493 (43%), Gaps = 93/493 (18%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N++ G L K +       LF  +    + P+  T++ LI+ +CK+G +      
Sbjct: 190 PSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGF 249

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRI---------MEAAA---------LFTKHRVF 206
             R+       N VT+ SL+ GLC   R+         ME +          +F  H   
Sbjct: 250 KERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNG 309

Query: 207 ACEPDVF----------TYNTLINGLCRTGHTIVALNLFEEMA---------------NG 241
           A +  +F          TY  L+NGLCR G    A  +  ++                N 
Sbjct: 310 AGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNA 369

Query: 242 NGEFGVVCK--------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             + G V K              PN +T+NT+I   C+ G VD A+    +M ++ ++P 
Sbjct: 370 YCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPT 429

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V TY S+I G+     +        EM   G++P+V+++  +++ LCK+ K+  A  +L 
Sbjct: 430 VETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLA 489

Query: 348 LMIWRGVNPNT-----------------------------------YTYNTLIDGYCLTD 372
            MI RGV+PN                                     TYNTLI+G     
Sbjct: 490 DMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNG 549

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           ++  A  LF+ M   GC  DV++YN+LI+ Y K+ + ++ L LY +M   GIKPTV T++
Sbjct: 550 RVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFH 609

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L     +   V    K+F EM +  +  D + YN  I    + G V++A+ L + + D 
Sbjct: 610 PLIYACRK-EGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQ 668

Query: 493 KYELNIVSYNCLI 505
             + + V+YN LI
Sbjct: 669 GVDCDKVTYNSLI 681



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 42/403 (10%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D  T+ IL+N  C++GR+     VL +++ +  TP+ +++  L+   C E  + +A    
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +      EP+  T+NT+I+  C TG    A      M     E GV   P   TYN++I
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV----EKGV--SPTVETYNSLI 437

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +G  ++G   +  E   +M    I P+V++Y S+I   C      +A+ +  +M+ +GV 
Sbjct: 438 NGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVS 497

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+   ++++++  C   K+  A R  + MI  G++    TYNTLI+G     ++  A  L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F+ M   GC  DV++YN+LI+ Y K+ + ++ L LY +M   GIKPTV T++ L     +
Sbjct: 558 FLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK 617

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
              V    K+F EM +  +  D + YN  I    + G V++A+ L + + D   + + V+
Sbjct: 618 -EGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676

Query: 501 YNC-----------------------------------LIDGL 508
           YN                                    LI GL
Sbjct: 677 YNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGL 719



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 177/380 (46%), Gaps = 11/380 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN +     +    D   +  +R+   G+ P + T++ LIN + + G     F  
Sbjct: 393 PNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEF 452

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + ++   PN +++ SLI  LC + ++++A  +          P+   YN LI   C 
Sbjct: 453 LDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCS 512

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A   F+EM               VTYNT+I+GL + G V KA++LFL+M  +  
Sbjct: 513 LSKLKDAFRFFDEMIQSG------IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG--KMDKA 342
           NPDV+TY S+I G+  + +  +   L+ +M   G++P V TF  ++    K G   MDK 
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK- 625

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             + + M+   + P+ + YN +I  Y     +  A  L   M   G   D V+YN+LI  
Sbjct: 626 --MFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           Y +++ V E   L  +M +KG+ P V TYN L  GL ++     A   + EM    +  +
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLN 743

Query: 463 TYTYNNFIDGLCKSGFVLEA 482
                  I GL + G + EA
Sbjct: 744 VSMCYQLISGLREEGMLREA 763



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 162/350 (46%), Gaps = 35/350 (10%)

Query: 187 LCAESRIM-EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           LC+ S+++ EA  L++  R     P   + N L+  L  + H    L +F ++ +     
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSG--- 152

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
               +P+ V Y   +        +DK  EL   M  + + P V  Y  V+ G C      
Sbjct: 153 ---TRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIK 209

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +A++LF EM+ + + P+ VT++ ++D  CK G +++A    E M  + V  N  TYN+L+
Sbjct: 210 DARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLL 269

Query: 366 DGYCLTDKIDHARKLFVSME-----------------SNGCMHDVV-----------SYN 397
           +G C + ++D AR++ + ME                 SNG   D +           +Y 
Sbjct: 270 NGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYC 329

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            L+N  C+   +E+A  + ++++  G+ P+ ++YN L     +   V++A+   ++M   
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  +  T+N  I   C++G V  A    R + +      + +YN LI+G
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLING 439



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 1/177 (0%)

Query: 333 LCKNGKM-DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
           LC   KM D+A+ L   M   G  P+T + N L+     +   +    +F  +  +G   
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D V+Y   +      KD+++   L   M+  G+ P+V  YN +  GL ++ +++ A KLF
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           DEM + ++  +T TYN  IDG CK G + EAL     +++   E N+V+YN L++GL
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGL 272



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 8/255 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A   FD M++       V+ +N L   L +N        LF ++   G  PD+ T++ L
Sbjct: 518 DAFRFFDEMIQSGIDATLVT-YNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSL 576

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ + K         +  ++      P   TF  LI   C +  ++    +F +      
Sbjct: 577 ISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDL 635

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD F YN +I      G+ + A++L ++M +     GV C  + VTYN++I    ++  
Sbjct: 636 VPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQ----GVDC--DKVTYNSLILAYLRDRR 689

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V + K L   MK + + P V TY  +I+G C   D+N A   + EM+++G+  +V     
Sbjct: 690 VSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQ 749

Query: 329 IMDELCKNGKMDKAS 343
           ++  L + G + +A 
Sbjct: 750 LISGLREEGMLREAQ 764


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 197/387 (50%), Gaps = 8/387 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  +   L K  +YD  L  ++++ ++   P + T+++L++  CK  +V     V
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++R    P+ + ++SLI GL    R+ EA  L          P    Y +++ GLC+
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+   +EM        V       TY+ I+ G    G V++A  +  +M D + 
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRVD------TYSFIVTGYIGMGKVEEAFAVMEEMADRDC 277

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD ++YT  I          EA+++F  M+++G +PD+ T+ +I+D  CK G M  A+ 
Sbjct: 278 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 337

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L LM    V PN Y Y  ++DG+  + +++ A +L+  +  +G +   V+YNT+IN  C
Sbjct: 338 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 397

Query: 405 KNKDVEEALSLYSEMLSKG--IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           K K ++EAL L  EM  +   ++P++VTY+ +  GL ++   ERA  L  EM  N V  D
Sbjct: 398 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 457

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAI 489
            +TY + I  L  +G V  A+EL   +
Sbjct: 458 CFTYTSLIQTLAGAGKVSRAMELLEEM 484



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 204/415 (49%), Gaps = 15/415 (3%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P VSSFNIL    A    ++ V +L + + + G+  +  TH ++++  C    +    
Sbjct: 25  SEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAV 84

Query: 163 VVLG-------RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
                      R+  +   P++VT+T+++ GL            + K     CEP + TY
Sbjct: 85  SYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTY 144

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             L++GLC+      A ++FEEM           KP+ + Y+++IDGL K G VD+A++L
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKGH------KPDIIAYSSLIDGLSKAGRVDEARKL 198

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
              M      P  V YTS++ G C      EA +   EM  + ++P V T+S I+     
Sbjct: 199 VDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 258

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            GK+++A  ++E M  R   P+T +Y   I+      + + A K+F +M   GC  D+ +
Sbjct: 259 MGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHT 318

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y  +I+ +CK   +  A  +   M    +KP    Y  +  G  +  ++E AL+L+  + 
Sbjct: 319 YGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 378

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL--NIVSYNCLIDGL 508
           ++ +   T TYN  I+ LCK   + EALEL R ++  K EL  +IV+Y+ +I GL
Sbjct: 379 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 433



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 12/365 (3%)

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+    + G++S     LG    S   PN  +F  L++G  A        AL  + +   
Sbjct: 3   LLLALVRGGQLSDA---LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARG 59

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVVCKPNTVTYNTIIDG 262
              +  T+  +++ LC       A++ F    N   E     F  +  P++VTY  I+DG
Sbjct: 60  ITSNGATHGVILSALCARRDLDKAVSYF----NSRTEEACRLFEAIEAPDSVTYTAIVDG 115

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L K G  D   E + KM      P ++TYT ++ G C A+    A  +F EM+ +G +PD
Sbjct: 116 LFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPD 175

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           ++ +S ++D L K G++D+A +L++LMI RG  P    Y +++ G C   +I  A K   
Sbjct: 176 IIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 235

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M        V +Y+ ++  Y     VEEA ++  EM  +   P  ++Y      L+ I 
Sbjct: 236 EMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIG 295

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + E A K+F+ M       D +TY   ID  CK G +  A  + R +  +  + N   Y 
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355

Query: 503 CLIDG 507
            ++DG
Sbjct: 356 MIMDG 360



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 10/349 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  + D M+   P P  V+  +I+ G L K       +   + +    L P + T+S 
Sbjct: 193 DEARKLVDLMIARGPPPTAVAYTSIVAG-LCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 251

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  +  MG+V   F V+  +      P+ +++T  I+ L +  R  EA  +F       
Sbjct: 252 IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+PD+ TY  +I+  C+ G    A ++   M           KPN   Y  I+DG  K  
Sbjct: 312 CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA------AVKPNRYIYTMIMDGFVKSS 365

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM--DQGVQPDVVT 325
            +++A EL+ ++  + I P  VTY +VI   C     +EA  L  EM    + ++P +VT
Sbjct: 366 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 425

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S+I+  L K G  ++A  LL  MI  GV P+ +TY +LI       K+  A +L   M 
Sbjct: 426 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 485

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             G   D  +Y TL+   C++ DV+ A  L  EM+  G  P   T+  +
Sbjct: 486 KAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 189/401 (47%), Gaps = 10/401 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S+  L   L +    D  + LF  ++     PD++ ++ L+   C   R   G ++L 
Sbjct: 45  VVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLR 100

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R+    + P+   + +++   C E +  EA  +  +       P V T   +IN  C+ G
Sbjct: 101 RMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 160

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL + E M          CKPN  TYN ++ G C EG V KA  L  KM+   +NP
Sbjct: 161 RMSDALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP 214

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY  +IRG C       A RL   M   G+  D  T++ +++ LCK+G+ D+A  L 
Sbjct: 215 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 274

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + +  RG+ PN  T+N+LI+G C + K D A K    M S GC  D  +Y++ I   CK 
Sbjct: 275 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 334

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           K  +E LS   EML K +KP+ V Y  +   L +        + + EM  +    D  TY
Sbjct: 335 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 394

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
              +   C  G + EA  +   +  +   ++ ++YN L+DG
Sbjct: 395 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 435



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 194/373 (52%), Gaps = 10/373 (2%)

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           +G  PD YT + LI  +C+  +V     +  ++    F  + V++ +LI+GLC   RI E
Sbjct: 4   SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDE 63

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  LF +      +PD+  Y  L+ GLC        L +   M     E G   +P+T  
Sbjct: 64  AVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMK----ELG--WRPSTRA 113

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  ++D  C+E    +A+E+  +M ++ + P VVT T+VI  +C     ++A R+   M 
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G +P+V T++ ++   C  GK+ KA  LL  M   GVNP+  TYN LI G C+   I+
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 233

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +L   ME +G + D  +YN LIN  CK+   ++A SL+  + ++GIKP  VT+N+L 
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL +  + + A K  ++M       DTYTY++FI+ LCK     E L     +     +
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 353

Query: 496 LNIVSYNCLIDGL 508
            + V+Y  +I  L
Sbjct: 354 PSTVNYTIVIHKL 366



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 188/418 (44%), Gaps = 23/418 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +   +     K       L + + +   G  P+++T++ L+  FC  G+V     +
Sbjct: 144 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 203

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++      P+AVT+  LI+G C +  I  A  L           D +TYN LIN LC+
Sbjct: 204 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 263

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A +LF+ +           KPN VT+N++I+GLCK G  D A +   KM     
Sbjct: 264 DGRTDQACSLFDSLETRG------IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 317

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY+S I   C      E      EM+ + V+P  V +++++ +L K       +R
Sbjct: 318 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 377

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
               M+  G NP+  TY T +  YC+  +++ A  + + M  NG   D ++YNTL++ + 
Sbjct: 378 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 437

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK--------------- 449
                + A+S+  +M S    P   TY  L   L  +  VE  L                
Sbjct: 438 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 497

Query: 450 --LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             LFD M++N    ++ TY++ ++G  + G   EA  L   +++    LN   Y  L+
Sbjct: 498 FGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 197/437 (45%), Gaps = 19/437 (4%)

Query: 53  KESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNI 112
           K  LR   +D  S    ++  C++   G I+     EA+ +F  M       P +  +  
Sbjct: 35  KMPLRGFAQDVVSYATLIEGLCEA---GRID-----EAVELFGEM-----DQPDMHMYAA 81

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L   +  +  L + +R+   G  P    ++ +++  C+  +      +L  +    
Sbjct: 82  LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG 141

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P  VT T++I   C E R+ +A  +    ++  C+P+V+TYN L+ G C  G    A+
Sbjct: 142 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 201

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  +M       GV   P+ VTYN +I G C +G ++ A  L   M+ + +  D  TY 
Sbjct: 202 TLLNKMR----ACGV--NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 255

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I   C     ++A  LF  +  +G++P+ VTF+ +++ LCK+GK D A + LE M+  
Sbjct: 256 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 315

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G  P+TYTY++ I+  C              M         V+Y  +I+   K ++    
Sbjct: 316 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 375

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
              + EM+S G  P VVTY T         ++  A  +  EM +N V  DT  YN  +DG
Sbjct: 376 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 435

Query: 473 LCKSGFVLEALELFRAI 489
               G    A+ + + +
Sbjct: 436 HASIGQTDHAVSILKQM 452



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 203/473 (42%), Gaps = 59/473 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL + + M ++    P V ++N L             ++L  ++ + G+ PD  T+++
Sbjct: 163 SDALRVLELM-KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C  G +   F +L  +       +  T+ +LI  LC + R  +A +LF       
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+  T+N+LINGLC++G   +A    E+M +        C P+T TY++ I+ LCK  
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTYTYSSFIEHLCKMK 335

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              +      +M  +++ P  V YT VI       ++    R + EM+  G  PDVVT++
Sbjct: 336 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 395

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             M   C  G++++A  +L  M   GV  +T  YNTL+DG+    + DHA  +   M S 
Sbjct: 396 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 455

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-----------------PTVVT 430
             + +  +Y  L+    + + VE+ L L    + K I+                 P   T
Sbjct: 456 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 515

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVA--ADTYT----------------------- 465
           Y+++  G  E  + E A  L   M+ + ++   D YT                       
Sbjct: 516 YSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMI 575

Query: 466 ----------YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                     Y + + GL   G   +A E+F   R   Y  + + +  +IDGL
Sbjct: 576 QHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 628



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 20/349 (5%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  +   F++  CK  G          E L     ML+    P  V+ + I+   L K +
Sbjct: 320 DTYTYSSFIEHLCKMKGS--------QEGLSFIGEMLQKDVKPSTVN-YTIVIHKLLKER 370

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           +Y  V   +  + S+G  PD+ T++  +  +C  GR++    VL  + ++  T + + + 
Sbjct: 371 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 430

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE----- 236
           +L+ G  +  +   A ++  +    A  P+ FTY  L+  L R       L L       
Sbjct: 431 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 490

Query: 237 --EMANGNGEFGVVCK----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
             E+ +  G F V+ K    PN+ TY++I++G  ++G  ++A  L   MK+++I+ +   
Sbjct: 491 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 550

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           YT+++  FC +  + +A  L   M+  G  P ++++  ++  L   G+ DKA  +     
Sbjct: 551 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSR 610

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           W+  +P+   +  +IDG       D +R++ + +E   C     +Y  L
Sbjct: 611 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 659



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 155/395 (39%), Gaps = 51/395 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD  L      P   +FN L   L K+   D      +++ SAG  PD YT+S 
Sbjct: 268 DQACSLFDS-LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 326

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I   CKM     G   +G +L+    P+ V +T +I  L  E      A  + +     
Sbjct: 327 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 386

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFG------ 246
           C PDV TY T +   C  G    A N+  EM+               +G+   G      
Sbjct: 387 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 446

Query: 247 --------VVCKPNTVTYNTIIDGLCKEGFVD-----------KAKEL------FLKMKD 281
                   V   PN  TY  ++  L +   V+           KA EL      F  MK 
Sbjct: 447 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 506

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+  TY+S++ GF       EA  L   M +  +  +   ++ ++   CK+ +   
Sbjct: 507 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 566

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  L+  MI  G  P   +Y  L+ G     + D A+++F++        D + +  +I+
Sbjct: 567 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 626

Query: 402 WYCK--NKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
              K  + D+   + +  E ++   +P+  TY  L
Sbjct: 627 GLIKKGHSDISREMIIMLERMN--CRPSHQTYAML 659



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 4/141 (2%)

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G  P+ YT+N+LI GYC T+++D AR LF  M   G   DVVSY TLI   C+   
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++EA+ L+ EM     +P +  Y  L  GL    + E  L +   M+       T  Y  
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 469 FIDGLCKSGFVLEALELFRAI 489
            +D  C+     EA E+ + +
Sbjct: 117 VVDFRCRERKAKEAEEMLQEM 137



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 112/244 (45%), Gaps = 27/244 (11%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV---------- 158
           ++N L    A     D  +S+ K++ S    P+ +T+ IL+    +M  V          
Sbjct: 428 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 487

Query: 159 -------SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--KHRVFACE 209
                  +  F +   + ++ F PN+ T++S+++G   + R  EA +L +  K    +  
Sbjct: 488 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 547

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D++T   L+   C++   + A  L   M     + G +  P  ++Y  ++ GL  EG  
Sbjct: 548 EDIYT--ALVTCFCKSKRYLDAWVLVCSMI----QHGFI--PQLMSYQHLLSGLICEGQT 599

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           DKAKE+F+  + ++ +PD + +  +I G       + ++ + I +     +P   T++++
Sbjct: 600 DKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 659

Query: 330 MDEL 333
            +EL
Sbjct: 660 TEEL 663


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 211/409 (51%), Gaps = 7/409 (1%)

Query: 101 HPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP     V  FN+L     +N      + L + + + G  PDI T++ L+N FCK+G + 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               ++G I      PN +T+T+LI   C    + +A  ++ +  V +  PDV TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NGLC++G    A ++F EM     E GVV  PN  +Y T+ID L KEG V +A  L  +M
Sbjct: 130 NGLCKSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRM 183

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               I  DVV YT+++ G   A   N A+ +F  ++++ + P+ VT+S ++D  CK G +
Sbjct: 184 VVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDV 243

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           +K   LL+ M  + + PN   Y++++DGY     ++ A  +   M     + +V  Y TL
Sbjct: 244 NKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ Y K      AL L+ EM S+G++      ++    L    ++E A +LF +M    +
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D   Y + +DG  K+G   +A  + + + +     ++V+YN LI+GL
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 202/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K++  +  L ++  +    L PD+ T++ ++N  CK G+V     V
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN  ++ +LI  L  E  + EA  L  +  V     DV  Y  L++GL +
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A ++F+ +     E  +V  PN VTY+ +IDG CK G V+K + L  +M++++I
Sbjct: 205 AGMANNAEDMFQVLL----EESLV--PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+ Y+S++ G+      NEA  +  +M+ + + P+V  +  ++D   K  +   A  
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  RG+  N +  ++ ++    + +++ A +LF  M S G + D V+Y ++++ + 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     +A ++  EM  K     VV YN L  GLF++ + E        MR+  +A D+ 
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSA 437

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T+N  I+  CK G +  AL+L   ++    + N ++ N L+  L
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 198/418 (47%), Gaps = 8/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ +   M++ +  P  V  +  L     K       L LFK + S GL  + +    
Sbjct: 279 NEAMDVMRKMVQRNILPN-VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDS 337

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +N   + GR+     +   ++     P+ V +TS++ G     +  +A  +  +    +
Sbjct: 338 FVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              DV  YN LINGL + G        +E  +   G   +   P++ T+NT+I+  CKEG
Sbjct: 398 SGFDVVAYNVLINGLFKLGK-------YESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +L  +MK   + P+ +T   +++  C A +  +   L  +M+  G  P   T  
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK 510

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K+ + D    + + ++  GV  +  TYNTLI  +C    I  A  +F  M   
Sbjct: 511 AVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK 570

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+++YN LI+ YC +  +++A +++S+ML++G+ P V TYN L  GL     ++ A
Sbjct: 571 GILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L ++M+   +  +  TY+  + G  K G + E ++L+  +    +     +YN LI
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 200/437 (45%), Gaps = 42/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +  L   L K    +    +F+ L    L P+  T+S LI+  CK+G V+ G ++L 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN + ++S++ G   +  + EA  +  K       P+VF Y TLI+G  +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              +AL+LF+EM +   E       N    ++ ++ L + G +++A ELF  M    + P
Sbjct: 312 QRGIALDLFKEMKSRGLE------ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YTS++ GF  A   ++A  +  EM ++    DVV ++V+++ L K GK +  S   
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES-FH 424

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G+ P++ T+NT+I+ YC    + +A KL   M+S G   + ++ N L+   C  
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 407 KDVEEALSLYSEMLSKGIKPT-----------------------------------VVTY 431
            ++E+ + L ++ML  G  PT                                   + TY
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTY 544

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL      +  + RA  +F +M    + AD  TYN  I G C S  + +A  +   +  
Sbjct: 545 NTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT 604

Query: 492 SKYELNIVSYNCLIDGL 508
                N+ +YN L+ GL
Sbjct: 605 EGVSPNVETYNILLGGL 621



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 189/391 (48%), Gaps = 7/391 (1%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L ++   +    LFK + S GL PD   ++ +++ F K G+ S  F +   +       +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V +  LI GL    +  E+ +  T  R     PD  T+NT+IN  C+ G+   AL L  
Sbjct: 402 VVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM +    +G+  KPN++T N ++  LC  G ++K  +L   M     +P   T+ +V+ 
Sbjct: 461 EMKS----YGL--KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
               +   +    +  +++  GV+ D+ T++ ++   C+ G + +A+ + + M+ +G+  
Sbjct: 515 ASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  TYN LI GYC++  +  A  +   M + G   +V +YN L+      + ++EA  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           ++M  +G+ P   TY+ L  G  +I  ++  +KL+ EM        T TYN  I    K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             + +A EL + ++      N  +Y+ LI G
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICG 725



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 178/361 (49%), Gaps = 21/361 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N+L   L K   Y++  S    +   GL PD  T + +IN +CK G + +   +L 
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN++T   L++ LCA   I +   L     V    P   T+  +++   ++ 
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              V L++ +++       G+  K +  TYNT+I   C+ G + +A  +F  M  + I  
Sbjct: 521 RADVILHMHDQLV------GMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D++TY ++I G+C ++   +A  +  +M+ +GV P+V T+++++  L     + +A+ L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG+ PN  TY+ L+ G+     +    KL+  M + G +    +YN LI+ + K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI-------------HQVERALKLFDE 453
           K + +A  L  EM  +GI P   TY+ L  G +++             +Q E A +LF+E
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE-AKRLFEE 753

Query: 454 M 454
           M
Sbjct: 754 M 754



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 182/403 (45%), Gaps = 7/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +     K    +  + + +++    + P+++ +  LI+ + K  +      +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N     S +  L    R+ EA  LF         PD   Y ++++G  +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A N+ +EM   +  F VV       YN +I+GL K G  + ++     M+   +
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVA------YNVLINGLFKLGKYE-SESFHTGMRQLGL 432

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+ ++I  +C   +   A +L  EM   G++P+ +T ++++  LC  G+++K   
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+  G +P   T+  ++D    + + D    +   +   G   D+ +YNTLI+ +C
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   +  A  ++ +M+ KGI   ++TYN L  G      +++A  +  +M    V+ +  
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  + GL  +  + EA  L   +++     N  +Y+ L+ G
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 24/270 (8%)

Query: 95  DYMLRMHPS------PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           D +L MH           +S++N L     +         +FK +   G+  DI T++ L
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+ +C    +   F V  ++L    +PN  T+  L+ GL A   I EAA L  + +    
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGL 642

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  TY+ L++G  + G+    + L+ EM       G V  P T TYN +I    K   
Sbjct: 643 VPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTRTYNVLISCFAKGKK 696

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW------------NEAKRLFIEMMD 316
           + +AKEL  +M+   I P+  TY  +I G+   +               EAKRLF EM +
Sbjct: 697 MSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNE 756

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +G  P   T + I   L K GK   A R+L
Sbjct: 757 KGFIPCENTLACISFTLAKPGKKADAQRIL 786


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 211/409 (51%), Gaps = 7/409 (1%)

Query: 101 HPS-PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP     V  FN+L     +N      + L + + + G  PDI T++ L+N FCK+G + 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               ++G I      PN +T+T+LI   C    + +A  ++ +  V +  PDV TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
           NGLC++G    A ++F EM     E GVV  PN  +Y T+ID L KEG V +A  L  +M
Sbjct: 130 NGLCKSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRM 183

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
               I  DVV YT+++ G   A   N A+ +F  ++++ + P+ VT+S ++D  CK G +
Sbjct: 184 VVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDV 243

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           +K   LL+ M  + + PN   Y++++DGY     ++ A  +   M     + +V  Y TL
Sbjct: 244 NKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ Y K      AL L+ EM S+G++      ++    L    ++E A +LF +M    +
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D   Y + +DG  K+G   +A  + + + +     ++V+YN LI+GL
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 202/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K++  +  L ++  +    L PD+ T++ ++N  CK G+V     V
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      PN  ++ +LI  L  E  + EA  L  +  V     DV  Y  L++GL +
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A ++F+ +     E  +V  PN VTY+ +IDG CK G V+K + L  +M++++I
Sbjct: 205 AGMANNAEDMFQVLL----EESLV--PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHI 258

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V+ Y+S++ G+      NEA  +  +M+ + + P+V  +  ++D   K  +   A  
Sbjct: 259 FPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  RG+  N +  ++ ++    + +++ A +LF  M S G + D V+Y ++++ + 
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K     +A ++  EM  K     VV YN L  GLF++ + E        MR+  +A D+ 
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSA 437

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T+N  I+  CK G +  AL+L   ++    + N ++ N L+  L
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 200/437 (45%), Gaps = 42/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +  L   L K    +    +F+ L    L P+  T+S LI+  CK+G V+ G ++L 
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN + ++S++ G   +  + EA  +  K       P+VF Y TLI+G  +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              +AL+LF+EM +   E       N    ++ ++ L + G +++A ELF  M    + P
Sbjct: 312 QRGIALDLFKEMKSRGLE------ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YTS++ GF  A   ++A  +  EM ++    DVV ++V+++ L K GK +  S   
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESES-FH 424

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G+ P++ T+NT+I+ YC    + +A KL   M+S G   + ++ N L+   C  
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 407 KDVEEALSLYSEMLSKGIKPT-----------------------------------VVTY 431
            ++E+ + L ++ML  G  PT                                   + TY
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTY 544

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           NTL      +  + RA  +F +M    + AD  TYN  I G C S  + +A  +   +  
Sbjct: 545 NTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT 604

Query: 492 SKYELNIVSYNCLIDGL 508
                N+ +YN L+ GL
Sbjct: 605 EGVSPNVETYNILLGGL 621



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 197/418 (47%), Gaps = 8/418 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA+ +   M++ +  P  V  +  L     K       L LFK + S GL  + +    
Sbjct: 279 NEAMDVMRKMVQRNILPN-VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDS 337

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            +N   + GR+     +   ++     P+ V +TS++ G     +  +A  +  +    +
Sbjct: 338 FVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              DV  YN LINGL + G        +E  +   G   +   P++ T+NT+I+  CKEG
Sbjct: 398 SGFDVVAYNVLINGLFKLGK-------YESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +  A +L  +MK   + P+ +T   +++  C A +  +   L  +M+  G  P   T  
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK 510

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K+ + D      + ++  GV  +  TYNTLI  +C    I  A  +F  M   
Sbjct: 511 AVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK 570

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D+++YN LI+ YC +  +++A +++S+ML++G+ P V TYN L  GL     ++ A
Sbjct: 571 GILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEA 630

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
             L ++M+   +  +  TY+  + G  K G + E ++L+  +    +     +YN LI
Sbjct: 631 AGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 188/391 (48%), Gaps = 7/391 (1%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L ++   +    LFK + S GL PD   ++ +++ F K G+ S  F +   +       +
Sbjct: 342 LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFD 401

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V +  LI GL    +  E+ +  T  R     PD  T+NT+IN  C+ G+   AL L  
Sbjct: 402 VVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           EM +    +G+  KPN++T N ++  LC  G ++K  +L   M     +P   T+ +V+ 
Sbjct: 461 EMKS----YGL--KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
               +   +       +++  GV+ D+ T++ ++   C+ G + +A+ + + M+ +G+  
Sbjct: 515 ASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           +  TYN LI GYC++  +  A  +   M + G   +V +YN L+      + ++EA  L 
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           ++M  +G+ P   TY+ L  G  +I  ++  +KL+ EM        T TYN  I    K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             + +A EL + ++      N  +Y+ LI G
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICG 725



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 21/361 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N+L   L K   Y++  S    +   GL PD  T + +IN +CK G + +   +L 
Sbjct: 402 VVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLN 460

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PN++T   L++ LCA   I +   L     V    P   T+  +++   ++ 
Sbjct: 461 EMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR 520

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              V L+  +++       G+  K +  TYNT+I   C+ G + +A  +F  M  + I  
Sbjct: 521 RADVILHXHDQLV------GMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILA 574

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D++TY ++I G+C ++   +A  +  +M+ +GV P+V T+++++  L     + +A+ L+
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG+ PN  TY+ L+ G+     +    KL+  M + G +    +YN LI+ + K 
Sbjct: 635 NQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKG 694

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI-------------HQVERALKLFDE 453
           K + +A  L  EM  +GI P   TY+ L  G +++             +Q E A +LF+E
Sbjct: 695 KKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE-AKRLFEE 753

Query: 454 M 454
           M
Sbjct: 754 M 754



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 183/406 (45%), Gaps = 13/406 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  ++ +     K    +  + + +++    + P+++ +  LI+ + K  +      +
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       N     S +  L    R+ EA  LF         PD   Y ++++G  +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A N+ +EM   +  F VV       YN +I+GL K G  + ++     M+   +
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVA------YNVLINGLFKLGKYE-SESFHTGMRQLGL 432

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  T+ ++I  +C   +   A +L  EM   G++P+ +T ++++  LC  G+++K   
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKID---HARKLFVSMESNGCMHDVVSYNTLIN 401
           LL  M+  G +P   T+  ++D    + + D   H     V M   G   D+ +YNTLI+
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGM---GVKLDLSTYNTLIS 549

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +C+   +  A  ++ +M+ KGI   ++TYN L  G      +++A  +  +M    V+ 
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  TYN  + GL  +  + EA  L   +++     N  +Y+ L+ G
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +S++N L     +         +FK +   G+  DI T++ LI+ +C    +   F V  
Sbjct: 541 LSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHS 600

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++L    +PN  T+  L+ GL A   I EAA L  + +     P+  TY+ L++G  + G
Sbjct: 601 QMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +    + L+ EM       G V  P T TYN +I    K   + +AKEL  +M+   I P
Sbjct: 661 NMKECVKLYCEMITK----GFV--PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPP 714

Query: 287 DVVTYTSVIRGFCYANDW------------NEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           +  TY  +I G+   +               EAKRLF EM ++G  P   T + I   L 
Sbjct: 715 NSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLA 774

Query: 335 KNGKMDKASRLL 346
           K GK   A R+L
Sbjct: 775 KPGKKADAQRIL 786


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 223/451 (49%), Gaps = 31/451 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A+ I+DY++ ++ S P V + N L   + K++  +    ++  +   G   D Y+  I
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCI 210

Query: 148 LINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++   C  G+V  G  ++  R  + C  PN V + ++I G C    I  A  +F + ++ 
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGC-VPNIVFYNTIIGGYCKLGDIENAKLVFKELKLK 269

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------ 248
              P + T+ T+ING C+ G  + +  L EE+        V                   
Sbjct: 270 GFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDP 329

Query: 249 -----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                      CKP+  TYN +I+ LCKEG  + A  L  +   + +    ++Y  +I+ 
Sbjct: 330 AESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQA 389

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C + +++ A +L +++ ++G +PD+VT+ +++  L  +G MD A  +   +I RGV+P+
Sbjct: 390 YCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
              YN L+ G C T +   A+ LF  M     + D   Y TLI+ + ++ D +EA  +++
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFT 509

Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             + KG+K  VV +N +  G      ++ AL   + M   H+  D +TY+  IDG  K  
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  A+++FR +  +K + N+V+Y  LI+G 
Sbjct: 570 DMATAIKIFRDMEKNKCKPNVVTYTSLINGF 600



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 21/349 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++ IL   L  + H D  +++  +L   G+ PD   +++L++  CK GR     ++
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+A  + +LI G        EA  +FT       + DV  +N +I G CR
Sbjct: 473 FSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    AL     M   N E  V   P+  TY+TIIDG  K+  +  A ++F  M+    
Sbjct: 533 SGMLDEALACMNRM---NEEHLV---PDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKC 586

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK-MDKAS 343
            P+VVTYTS+I GFC   D++ A+  F EM  + + P+VVT++ ++    K    ++KA 
Sbjct: 587 KPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAV 646

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLT---------DKIDHAR-----KLFVSMESNGC 389
              ELM+     PN  T+N L+ G+            D  +H +     + F  M+S+G 
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGW 706

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
                +YN+++   C +  V+ A  L   M+ KG  P  V++  +  G 
Sbjct: 707 SDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGF 755



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 173/384 (45%), Gaps = 21/384 (5%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+  L     K+K YD    L  +L   G  PDI T+ ILI+     G +     +  ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +    +P+A  +  L+ GLC   R + A  LF++    +  PD + Y TLI+G  R+G  
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF 501

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  +F        E GV  K + V +N +I G C+ G +D+A     +M +E++ PD 
Sbjct: 502 DEARKVFTLSV----EKGV--KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY+++I G+    D   A ++F +M     +P+VVT++ +++  C  G    A    + 
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKE 615

Query: 349 MIWRGVNPNTYTYNTLIDGYCL-TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
           M  R + PN  TY TLI  +   +  ++ A   +  M +N C+ + V++N L+  + K  
Sbjct: 616 MQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675

Query: 408 D---VEEA-----------LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
               + E               +  M S G       YN++ + L     V+ A  L D 
Sbjct: 676 SGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDR 735

Query: 454 MRRNHVAADTYTYNNFIDGLCKSG 477
           M +   + D  ++   + G C  G
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVG 759



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 152/370 (41%), Gaps = 58/370 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  + +N+L   L K   +     LF  +    + PD Y ++ LI+ F + G       V
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +      + V   ++IKG C    + EA A   +       PD FTY+T+I+G  +
Sbjct: 508 FTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ +F +M          CKPN VTY ++I+G C +G    A+E F +M+  ++
Sbjct: 568 QQDMATAIKIFRDMEKNK------CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDL 621

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVTFSVIMDE----------- 332
            P+VVTYT++IR F   +   E    + E MM     P+ VTF+ ++             
Sbjct: 622 VPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLG 681

Query: 333 --------------------------------------LCKNGKMDKASRLLELMIWRGV 354
                                                 LC +G +  A  L + M+ +G 
Sbjct: 682 EPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGF 741

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKL-FVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           +P+  ++  ++ G+C+       R + F +++  G +   V Y+ ++  +     + EA 
Sbjct: 742 SPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKG-LEVAVRYSRVLEQHLPKAVICEAS 800

Query: 414 SLYSEMLSKG 423
           ++   M+ K 
Sbjct: 801 TILHAMVEKA 810



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 125/249 (50%), Gaps = 5/249 (2%)

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGV 319
           L +    ++ +++   +++EN+       + V+  +  +   ++A  ++   +E+ D   
Sbjct: 109 LARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDS-- 166

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            PDV+  + ++  + K+ +++ A ++ + M  RG   + Y+   ++ G C   K++  RK
Sbjct: 167 VPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRK 226

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L       GC+ ++V YNT+I  YCK  D+E A  ++ E+  KG  PT+ T+ T+  G  
Sbjct: 227 LIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFC 286

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +      + +L +E++   +    +  NN ID   + GF ++  E  R I  +  + +I 
Sbjct: 287 KKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIA 346

Query: 500 SYNCLIDGL 508
           +YN LI+ L
Sbjct: 347 TYNILINRL 355



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 24/282 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL   + M   H  P   +   I+ G   K +   T + +F+ +      P++ T++ 
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDG-YVKQQDMATAIKIFRDMEKNKCKPNVVTYTS 595

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF- 206
           LIN FC  G  S        +      PN VT+T+LI+    ES  +E A  + +  +  
Sbjct: 596 LINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTN 655

Query: 207 ACEPDVFTYNTLINGLCRT--------------GHTIVALNLFEEM-ANGNGEFGVVCKP 251
            C P+  T+N L+ G  +               G + +    F  M ++G  + G     
Sbjct: 656 KCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGA---- 711

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
               YN+++  LC  G V  A  L  +M  +  +PD V++ +++ GFC   +  + + + 
Sbjct: 712 ---AYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD 768

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
              +D+      V +S ++++      + +AS +L  M+ + 
Sbjct: 769 FRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKA 810


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 212/420 (50%), Gaps = 8/420 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           TP  AL + D M      P  V  +N L     +    D    +   +  AG+ P++ T+
Sbjct: 185 TP-AALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +  I  +C+   V   F +   ++R+    + VT ++L+ GLC + R  EA ALF +   
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P+  TY TLI+ L + G     L+L  EM +     GVV   + VTY  ++D L K
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLVTYTALMDWLGK 356

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G  D+ K+       +N++P+ VTYT +I   C A++ +EA+++ +EM ++ + P+VVT
Sbjct: 357 QGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS +++   K G +DKA+    +M  RG+NPN  TY TLIDG+      D A +++  M 
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   +    ++L+N   +N  +EEA++L+ +    G+    V Y TL  GLF+   + 
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K   E+   ++  D   YN FI+ LC  G   EA      +R+   + +  +YN +I
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMI 596



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 218/487 (44%), Gaps = 39/487 (8%)

Query: 47  TTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALC-----------IFD 95
            T+     ++R    D ASL   L   C+      + L+ P  AL            I  
Sbjct: 57  ATSGLAAAAIRFRPADPASLNALLYSHCR------LRLLRPAIALLRSSRPTTVAYNILL 110

Query: 96  YMLRMHPSPPPV-------------SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP-D 141
             L  H   P V              + N L   L +N   D   +L  R    G+   D
Sbjct: 111 AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALD 168

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   + LI  +C++G       V  R+       + V + +L+ G C   ++  A  +  
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +    +P+V TY   I   CRT     A +L+E M       GV+   + VT + ++ 
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVA 282

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC++G   +A  LF +M      P+ VTY ++I     A    E   L  EM+ +GV  
Sbjct: 283 GLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D+VT++ +MD L K GK D+    L   +   ++PN  TY  LID  C    +D A ++ 
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + ME      +VV+++++IN + K   +++A      M  +GI P VVTY TL  G F+ 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
              + AL+++ +M    V  + +  ++ ++GL ++G + EA+ LF+    S   L+ V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 502 NCLIDGL 508
             LIDGL
Sbjct: 523 TTLIDGL 529



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 6/395 (1%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L +N   +  ++LFK  + +GL  D   ++ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+AV +   I  LC   +  EA +  T+ R    +PD  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM   +       KPN +TYNT++ GL   G V+KAK L  +M     +P  +T+ 
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            V++    +   +    +   MM+ G+  D+  ++ ++  LC +G   KA+ +LE M+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+T T+N LI G+C +  +D+A   +  M       ++ ++NTL+        + EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            ++  EM   G++P  +TY+ L  G  +      A++L+ EM          TYN  I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             K+G + +A ELF+ ++         +Y+ L+ G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 190/429 (44%), Gaps = 29/429 (6%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L   L K    D V    +   S  L P+  T+++LI+  CK   V     VL  +
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                +PN VTF+S+I G      + +A       +     P+V TY TLI+G  +    
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 229 IVALNLFEEM---------------ANG---NGEF-----------GVVCKPNTVTYNTI 259
             AL ++ +M                NG   NG+            G     + V Y T+
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           IDGL K G +  A +   ++ D N+ PD V Y   I   C    + EAK    EM + G+
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           +PD  T++ ++   C+ G+  KA +LL  M    + PN  TYNTL+ G   T  ++ A+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           L   M S G     +++  ++    +++ ++  L ++  M++ G+   +  YNTL   L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
                 +A  + +EM  + +A DT T+N  I G CKS  +  A   +  +       NI 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 500 SYNCLIDGL 508
           ++N L+ GL
Sbjct: 766 TFNTLLGGL 774



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 182/403 (45%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +F+ +     K    D      + +   G+ P++ T+  LI+ F K         V
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L      N     SL+ GL    +I EA ALF          D   Y TLI+GL +
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A    +E+ + N        P+ V YN  I+ LC  G   +AK    +M++  +
Sbjct: 532 AGDMPTAFKFGQELMDRN------MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY ++I   C   +  +A +L  EM    ++P+++T++ ++  L   G ++KA  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL  M+  G +P++ T+  ++     + ++D    +   M + G   D+  YNTL+   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            +    +A  +  EML  GI P  +T+N L LG  +   ++ A   + +M   +++ +  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T+N  + GL   G + EA  +   +  S  E N ++Y+ L  G
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATG 808



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 6/343 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+   CL     +    S    + + GL PD  T++ +I   C+ G  +    +
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  S   PN +T+ +L+ GL     + +A  L  +       P   T+  ++    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +    V L++ E M N           +   YNT++  LC  G   KA  +  +M    I
Sbjct: 672 SRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+ ++I G C ++  + A   + +M+ Q + P++ TF+ ++  L   G++ +A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M   G+ PN  TY+ L  G+        A +L+  M   G +  V +YN LI+ + 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           K   + +A  L+ +M  +G+ PT  TY+ L  G +++ + +++
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 189/401 (47%), Gaps = 12/401 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+  L   L +    D   S    +    L PD++T++++I+  CK  R+S     
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI-- 65

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
                 +   P+ VT+ +L+ GLC   R+ +A +LF         P   TY TLI+  C+
Sbjct: 66  --EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  L + MA+        C P   +Y +II+GLCK   VD+A +LF +MK    
Sbjct: 124 MCQFETAYGLLQLMASRK------CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY ++I G C     +EAK L   M++   QPD +TF+ +++ LC   ++ +A  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  +G  P+  T+  L+   C+  K+  A  L V      C   V+ Y  +     
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPA--LSVVRNYPACPEAVILYTPIFRELG 295

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           + +  + A  L  +M  +G+ P VVTY   F GL +  +  RA + F  M    +  D  
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            YN  +DG CK+  +  A ++ R +  S    NIV+YN L+
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLV 396



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 184/376 (48%), Gaps = 39/376 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L G L KN       SLF  +  AG+ P   T++ LI+ FCKM +    + +
Sbjct: 74  PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGL 133

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     +P   ++ S+I GLC   ++ +A  LF + ++  C+PD  TYNTLI+GLC 
Sbjct: 134 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 193

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L   M   + +      P+ +T+  +I+GLC    + +A  LF  M  +  
Sbjct: 194 KQRLHEAKDLLTVMVENSFQ------PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 247

Query: 285 NPDVVTYTSVIRGFCYAND---------------------------------WNEAKRLF 311
            PD+VT+T ++   C                                     ++ A RL 
Sbjct: 248 APDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLL 307

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            +M  +GV P+VVT++     L    +  +A R    M+ +G+ P+   YN L+DG+C  
Sbjct: 308 QKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKA 367

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           +++D A K+   M+ +G   ++V+YNTL+  +C+   VE    L   M+S+G +P V T+
Sbjct: 368 NRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATW 427

Query: 432 NTLFLGLFEIHQVERA 447
           +TL  GLF + QV+ A
Sbjct: 428 STLVAGLFRVGQVDAA 443



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 191/404 (47%), Gaps = 12/404 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N++   L K +     +  F+ +      PD+ T++ L+   CK GRV+    +
Sbjct: 43  PDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSL 98

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G +  +  TP+ VT+T+LI   C   +   A  L        C P V++Y ++INGLC+
Sbjct: 99  FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 158

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LFEEM          CKP+ VTYNT+I GLC +  + +AK+L   M + + 
Sbjct: 159 NRKVDQAYQLFEEMKLAG------CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSF 212

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+T++I G C  +   EA  LF  M  QG  PD+VT +V++ +LC   K+  A  
Sbjct: 213 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPA-- 270

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L  +  +         Y  +          D A +L   M   G   +VV+Y        
Sbjct: 271 LSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLG 330

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
             K+   A   +  ML +GI+P +V YN L  G  + ++++ A K+   M ++ +  +  
Sbjct: 331 DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIV 390

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  +   C+ G V    EL   +     + ++ +++ L+ GL
Sbjct: 391 TYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 434



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 169/366 (46%), Gaps = 43/366 (11%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           PNA+++  L+K LC   +I +A +   +       PDVFTYN +I+ LC+      A+  
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           FE M           +P+ VTYNT++ GLCK G V +A  LF  M+   I P  VTYT++
Sbjct: 68  FETMP----------EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I  FC    +  A  L   M  +   P V ++  I++ LCKN K+D+A +L E M   G 
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+  TYNTLI G C+  ++  A+ L   M  N    D +++  LI   C    ++EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 415 LYSEMLSKGIKPTVVT---------------------------------YNTLFLGLFEI 441
           L+  M  +G  P +VT                                 Y  +F  L   
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRR 297

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
              +RA +L  +M R  VA +  TY  F  GL      + A   FR + +   E ++V+Y
Sbjct: 298 RGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAY 357

Query: 502 NCLIDG 507
           N L+DG
Sbjct: 358 NVLVDG 363



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 162/322 (50%), Gaps = 14/322 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+  +   L KN+  D    LF+ +  AG  PD  T++ LI+  C   R+     +
Sbjct: 144 PTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDL 203

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++ + F P+ +TFT+LI+GLC   RI EA  LF       C PD+ T+  L++ LC 
Sbjct: 204 LTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCI 263

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++              C    + Y  I   L +    D+A  L  KM    +
Sbjct: 264 RRKLRPALSVVRNYP--------ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 315

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIE---MMDQGVQPDVVTFSVIMDELCKNGKMDK 341
            P+VVTYT+  +G     DW E  R + E   M++QG++PD+V ++V++D  CK  ++D 
Sbjct: 316 APNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDM 372

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +++  M   G+ PN  TYNTL+  +C   K++   +L  +M S G   DV +++TL+ 
Sbjct: 373 AEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVA 432

Query: 402 WYCKNKDVEEALSLYSEMLSKG 423
              +   V+ A S  +  +S+G
Sbjct: 433 GLFRVGQVDAAYSFLNLAMSQG 454



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C+P+  +Y  L+  LCRTG    A +   EMA           P+  TYN +ID LCK  
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK------LVPDVFTYNVVIDTLCKAR 59

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A E F  M +    PDVVTY +++ G C      +A  LF  M   G+ P  VT++
Sbjct: 60  RISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYT 115

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  CK  + + A  LL+LM  R  +P  Y+Y ++I+G C   K+D A +LF  M+  
Sbjct: 116 TLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA 175

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           GC  D V+YNTLI+  C  + + EA  L + M+    +P  +T+  L  GL    +++ A
Sbjct: 176 GCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEA 235

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             LF  M +   A D  T+   +  LC    +  AL + R
Sbjct: 236 FVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVR 275



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 136/264 (51%), Gaps = 4/264 (1%)

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
           F   CKPN ++Y  ++  LC+ G +DKA     +M  E + PDV TY  VI   C A   
Sbjct: 2   FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
           + A    IE  +   +PDVVT++ ++  LCKNG++ +A  L   M   G+ P+  TY TL
Sbjct: 62  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           ID +C   + + A  L   M S  C   V SY ++IN  CKN+ V++A  L+ EM   G 
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP  VTYNTL  GL    ++  A  L   M  N    D  T+   I+GLC +  + EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF+ +       ++V++  L+  L
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKL 261



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 4/195 (2%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           +  Q  +P+ +++  ++  LC+ GK+DKA   +  M    + P+ +TYN +ID  C   +
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           I  A + F +M       DVV+YNTL+   CKN  V +A SL+  M   GI P+ VTY T
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L     ++ Q E A  L   M     +   Y+Y + I+GLCK+  V +A +LF  ++ + 
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 494 YELNIVSYNCLIDGL 508
            + + V+YN LI GL
Sbjct: 177 CKPDRVTYNTLIHGL 191


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 206/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++L     KN + +     +  + + G+   +Y+ + ++  + K     + F +
Sbjct: 296 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 355

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               L S    N  TF +L+  LC E ++ EA  L+ +       P+V +YN +I G CR
Sbjct: 356 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 414

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A  +++EM + NG       PN VT+  ++DG  K+G ++ A  +F +MKD NI
Sbjct: 415 KDNINAACKVYKEMLD-NG-----FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   T   +I+G C A    E + LF + + QG  P  + ++ I+D   K G ++ AS 
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M   G+ P+T TY +LIDG+C  + ID A KL   M+  G   D+ +Y TLI+ +C
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +D++ A  L +E+   G+ P    YN++  G   ++ VE A+ L+ +M    +  D  
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + IDGL KSG +L A ++   +       +  ++  LI+GL
Sbjct: 649 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 692



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 205/401 (51%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +FN L   L K    +   +L+  + + G+ P++ +++ +I   C+   ++    V  
Sbjct: 367 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L + FTPNAVTFT L+ G   +  I  A ++F + +     P   T   +I GLC+ G
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +    +LF +  +     G V  P  + YNTIIDG  KEG ++ A  ++ +M +  I P
Sbjct: 487 RSFEGRDLFNKFVSQ----GFV--PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 540

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             VTYTS+I GFC  N+ + A +L  +M  +G++ D+  +  ++D  CK   M  A  LL
Sbjct: 541 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 600

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +   G++PN + YN++I G+   + ++ A  L+  M + G   D+ +Y +LI+   K+
Sbjct: 601 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 660

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +  A  +++EMLSKGI P    +  L  GL    Q E A K+ ++M   ++      Y
Sbjct: 661 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIY 720

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  I G  K G + EA  L   + D     + ++Y+ L++G
Sbjct: 721 NTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 30/420 (7%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL  N  Y   LSL + + +AG  P   T + +I    K G V+    +   ++    + 
Sbjct: 204 CLKPNSGY--ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 261

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N    TSL+KG C +  +  A  L  +       P+  TY+ LI+G C+ G+   A   +
Sbjct: 262 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 321

Query: 236 EEMA-----------NGNGEFGVVCK-----------------PNTVTYNTIIDGLCKEG 267
            EM            N   E  + C+                  N  T+NT++  LCKEG
Sbjct: 322 SEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEG 381

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  L+ ++  + I+P+VV+Y ++I G C  ++ N A +++ EM+D G  P+ VTF+
Sbjct: 382 KMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFT 441

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++MD   K G ++ A  +   M    + P   T   +I G C   +    R LF    S 
Sbjct: 442 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 501

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +   + YNT+I+ + K  ++  A ++Y EM   GI P+ VTY +L  G  + + ++ A
Sbjct: 502 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 561

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LKL ++M+R  +  D   Y   IDG CK   +  A EL   +R +    N   YN +I G
Sbjct: 562 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 621



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 7/385 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  ++D ++    SP  VS  NI+ G   K+ + +    ++K +   G  P+  T +I
Sbjct: 384 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTI 442

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ + K G + + F +  R+  +   P   T   +IKGLC   R  E   LF K     
Sbjct: 443 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG 502

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    YNT+I+G  + G+  +A N++ EM     E G+   P+TVTY ++IDG CK  
Sbjct: 503 FVPTCMPYNTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGN 556

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +L   MK + +  D+  Y ++I GFC   D   A  L  E+   G+ P+   ++
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 616

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++        +++A  L + M+  G+  +  TY +LIDG   + ++ +A  +   M S 
Sbjct: 617 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 676

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D  ++  LIN  C     E A  +  +M  K + P+V+ YNTL  G F+   ++ A
Sbjct: 677 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 736

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDG 472
            +L DEM    +  D  TY+  ++G
Sbjct: 737 FRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 166/323 (51%), Gaps = 15/323 (4%)

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           E  I+EA   F + +    E D   Y+  ++ LC   ++  AL+L  EM       G + 
Sbjct: 171 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI- 225

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN----PDVVTYTSVIRGFCYANDWN 305
            P   T+ ++I    KEG V +A    L++KD+ +N     ++   TS+++G+C   +  
Sbjct: 226 -PPEGTFTSVITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR 280

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
            A  L  E+ + G+ P+ VT+SV++D  CKNG ++KA      M  +G+  + Y+ N+++
Sbjct: 281 SALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 340

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           +GY       +A  +F     +G + +V ++NTL++W CK   + EA +L+ E+++KGI 
Sbjct: 341 EGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGIS 399

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P VV+YN + LG      +  A K++ EM  N    +  T+   +DG  K G +  A  +
Sbjct: 400 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSI 459

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           F  ++D+       +   +I GL
Sbjct: 460 FHRMKDANILPTDTTLGIIIKGL 482



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 3/255 (1%)

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
           T  YN  +D   +EG + +A++ FL+ K   +  D   Y+  +   C   +   A  L  
Sbjct: 160 TKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLR 217

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           EM   G  P   TF+ ++    K G + +A RL + M+  G + N     +L+ GYC+  
Sbjct: 218 EMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQG 277

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +  A  L   +  +G + + V+Y+ LI+  CKN ++E+A   YSEM +KGI+ +V + N
Sbjct: 278 NLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           ++  G  +    + A  +F++   + + A+ +T+N  +  LCK G + EA  L+  +   
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK 396

Query: 493 KYELNIVSYNCLIDG 507
               N+VSYN +I G
Sbjct: 397 GISPNVVSYNNIILG 411


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 207/408 (50%), Gaps = 13/408 (3%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
            P+ P +  +N L   L +      V+ ++  +   G+ P+++T+++L+   C+  RV  
Sbjct: 124 RPTEPRL--YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGA 181

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L  + R    P+ VT+ +++  LC   R+ EA  +       A  P   +YN ++ 
Sbjct: 182 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-----AMPPVAASYNAIVL 236

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LCR        ++  +M  G G      +PN +TY TI+D  CK G +  A  +  +M 
Sbjct: 237 ALCREFRMQEVFSVVSDMV-GRG-----LQPNVITYTTIVDAFCKAGELRMACAILARMV 290

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
                P+VVT+T+++RG       ++A  ++  M+ +G  P  V++++++  LC  G + 
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLK 350

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            AS +L  M   G  PN  TY+TLIDG+     +  A  ++  M  +GC  +VV Y  ++
Sbjct: 351 GASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMV 410

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           + +CK     +A SL  +ML +   P  VT+NTL   L +  +V RAL +F EMRR+   
Sbjct: 411 DVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCV 470

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  TYN  I GL + G   +AL +   ++    EL++V+YN ++ GL
Sbjct: 471 PNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGL 518



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 212/451 (47%), Gaps = 13/451 (2%)

Query: 64  ASLKKFLKERC-KSSGQGDINLITPNEALCIFDYMLR----MHPSPPPVSSFNILFGCLA 118
            + +K L E   K     D+   T    LC  D +      +   PP  +S+N +   L 
Sbjct: 180 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALC 239

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           +      V S+   +   GL P++ T++ +++ FCK G +     +L R++ +  TPN V
Sbjct: 240 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 299

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           TFT+L++GL  + R+ +A  ++         P   +YN LI GLC  G    A ++   M
Sbjct: 300 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 359

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                     C PN  TY+T+IDG  K G +  A  ++  M      P+VV YT+++  F
Sbjct: 360 EQHG------CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVF 413

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C    +N+AK L  +M+ +   P+ VTF+ ++  LC   ++ +A  +   M   G  PN 
Sbjct: 414 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 473

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN LI G         A  +   M+S+G    +V+YNT+++  C+ +   EA+    +
Sbjct: 474 RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGK 533

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ +GI+P   T++ +     +  +V  A  +   M   +   +   Y   +  LC    
Sbjct: 534 MIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDK 593

Query: 479 VLEALE-LFRAIRDSKYELNIVSYNCLIDGL 508
           +++A+  L + + +  Y  N V++N L+ G+
Sbjct: 594 LVDAMTYLLKMLYEGIYP-NTVTWNVLVRGV 623



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 205/447 (45%), Gaps = 39/447 (8%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D M R     P V ++N+L   L +N        +   +   G  PD  T++ +++  
Sbjct: 150 VYDNM-RKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVL 208

Query: 153 CKMGRVSHG------------------------------FVVLGRILRSCFTPNAVTFTS 182
           CK+ R+                                 F V+  ++     PN +T+T+
Sbjct: 209 CKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 268

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG 241
           ++   C    +  A A+  +  +  C P+V T+  L+ GL   G    AL+++  M A G
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 328

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                    P+TV+YN +I GLC  G +  A  +   M+     P+V TY+++I GF  A
Sbjct: 329 -------WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 381

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
            D   A  ++ +M   G +P+VV ++ ++D  CK    ++A  L++ M+     PNT T+
Sbjct: 382 GDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTF 441

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           NTLI   C   ++  A  +F  M  +GC+ +  +YN LI+   +  +  +AL + +EM S
Sbjct: 442 NTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS 501

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            GI+ ++VTYNT+  GL +      A+    +M    +  + +T++  I   CK G V  
Sbjct: 502 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 561

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A  +  A+       NI+ Y  L+  L
Sbjct: 562 AAWMLGAMNVVNCHRNILVYTILMAEL 588


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 206/415 (49%), Gaps = 25/415 (6%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +F +L    AK    +  +  F+ +      PD++T++ +++   +   V     +  R+
Sbjct: 128 AFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRM 187

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRT 225
           L+    PN  TF+ LI G+C   +   A  +F   T+ R+    P+  TY  +I+GLC+ 
Sbjct: 188 LKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRIL---PNKITYTIIISGLCQA 244

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
               VA  LF  M +        C P++VTYN ++ G CK G VD+A  L    + +   
Sbjct: 245 QKADVAYRLFIAMKDHG------CIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYV 298

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            D   Y+ +I G   A  + +A+  + +M +  ++PDV+ ++++M  L K GK   A RL
Sbjct: 299 LDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRL 358

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
           L  M  RG+ P+T+ YN LI GYC    +D A+ L + +  N C     +Y  LI   C+
Sbjct: 359 LNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCR 418

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR--RN------ 457
           +  V +A  +++EM   G  P+VVT+N L  G  +   +E+A  LF +M   RN      
Sbjct: 419 SGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLR 478

Query: 458 -----HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                +   DT +    ++ LC SG +L+A  +   + DS +  NI++YN LI G
Sbjct: 479 LSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHG 533



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 191/380 (50%), Gaps = 12/380 (3%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           S F+RL S        +H+++I+   K       + VL  I R  F+ +A  FT LI+  
Sbjct: 83  SKFRRLRSW------VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAY 136

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
                I +A   F   + F C+PDVFTYNT+++ + R    ++AL ++  M   N     
Sbjct: 137 AKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN----- 191

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            C PN  T++ +IDG+CK G    A ++F +M    I P+ +TYT +I G C A   + A
Sbjct: 192 -CLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVA 250

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            RLFI M D G  PD VT++ ++   CK G++D+A  LL+         +   Y+ LIDG
Sbjct: 251 YRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDG 310

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                + + A+  +  M  +    DV+ Y  ++    K    ++AL L +EM  +G+ P 
Sbjct: 311 LFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPD 370

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
              YN L  G  ++  ++ A  L  E+ +N   +   TY   I G+C+SG V +A ++F 
Sbjct: 371 THCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFN 430

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            +       ++V++N LIDG
Sbjct: 431 EMEKHGCYPSVVTFNALIDG 450



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 205/425 (48%), Gaps = 19/425 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M++     P V ++N +   + + +     L ++ R+      P+I T SILI+  CK G
Sbjct: 151 MMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSG 210

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           +  +   +   + +    PN +T+T +I GLC   +   A  LF   +   C PD  TYN
Sbjct: 211 KTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYN 270

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L++G C+ G    AL L +               +   Y+ +IDGL +    + A+  +
Sbjct: 271 ALLHGFCKLGRVDEALGLLKYFEKDRYVL------DKQGYSCLIDGLFRARRFEDAQVWY 324

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            KM + NI PDV+ YT +++G   A  + +A RL  EM ++G+ PD   ++ ++   C  
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDL 384

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +D+A  L   +       +  TY  LI G C +  +  A+++F  ME +GC   VV++
Sbjct: 385 GLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTF 444

Query: 397 NTLINWYCKNKDVEEALSLYSEM-----------LSKGIKPTVVT--YNTLFLGLFEIHQ 443
           N LI+ +CK  ++E+A  L+ +M           LS+G    + T    T+   L +   
Sbjct: 445 NALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGL 504

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           + +A  +  ++  +  A +  TYN  I G CK+G +  A +LF+ ++      + V+Y  
Sbjct: 505 ILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGT 564

Query: 504 LIDGL 508
           LI+GL
Sbjct: 565 LINGL 569



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 189/404 (46%), Gaps = 10/404 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P V  + I+   L+K   +   L L   +   GL PD + ++ LI  +C +G +  
Sbjct: 330 HNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDE 389

Query: 161 GFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
              +   I ++ CF+ +A T+T LI G+C    + +A  +F +     C P V T+N LI
Sbjct: 390 AKSLHLEISKNDCFS-SACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALI 448

Query: 220 NGLCRTGHTIVALNLFEEMANGNG-------EFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           +G C+ G+   A  LF +M  G           G     +T +  T+++ LC  G + KA
Sbjct: 449 DGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             + +++ D    P+++TY  +I GFC A + N A +LF E+  +G+ PD VT+  +++ 
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           L    + + A  +L+ ++  G  P T  Y + +   C  +KI  A  L++    +    D
Sbjct: 569 LLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRD 628

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
                ++   + K  +VEEA+    EM  K     +  Y    +GL +  ++E ALK+F 
Sbjct: 629 SEVLKSVEENFEKG-EVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFF 687

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            +  ++V     +    I  L K G +  A E+F    D  Y L
Sbjct: 688 TLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYML 731



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 8/303 (2%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F+   D FT   LI    +      A+  FE M + +      CKP+  TYNT++  + +
Sbjct: 122 FSISADAFT--VLIQAYAKMDMIEKAVESFEMMKDFD------CKPDVFTYNTVLHVMVR 173

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  V  A  ++ +M   N  P++ T++ +I G C +     A ++F EM  + + P+ +T
Sbjct: 174 KEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKIT 233

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +++I+  LC+  K D A RL   M   G  P++ TYN L+ G+C   ++D A  L    E
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            +  + D   Y+ LI+   + +  E+A   Y +M    IKP V+ Y  +  GL +  + +
Sbjct: 294 KDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFK 353

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL+L +EM    +  DT+ YN  I G C  G + EA  L   I  +    +  +Y  LI
Sbjct: 354 DALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILI 413

Query: 506 DGL 508
            G+
Sbjct: 414 CGM 416



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 121/255 (47%)

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V++N IID L K+   +   ++  ++K    +     +T +I+ +   +   +A   F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M D   +PDV T++ ++  + +   +  A  +   M+     PN  T++ LIDG C + K
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
             +A ++F  M     + + ++Y  +I+  C+ +  + A  L+  M   G  P  VTYN 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  ++ +V+ AL L     ++    D   Y+  IDGL ++    +A   +R + +  
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 494 YELNIVSYNCLIDGL 508
            + +++ Y  ++ GL
Sbjct: 332 IKPDVILYTIMMKGL 346


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 206/401 (51%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NI+   L K+   + V +    +   G++PDI T++ LI+ +   G +   F ++ 
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +    F+P   T+ ++I GLC   +   A  +F +       PD  TY +L+   C+ G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             +   N+F +M + +    VV  P+ V +++++    + G +DKA   F  +K+  + P
Sbjct: 345 DAVETENIFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YT +I+G+C     +EA  L  EM+ QG   DVVT++ I+  LCK   + +A +L 
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG+ P++YT   LIDG+C    + +A +LF  M+      DVV+YNTL++ + K 
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D++ A  ++++M+SK I PT ++++ L   L     +  A +++DEM    +       
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMIC 578

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N+ I G C+SG   +       +    +  + +SYN LI G
Sbjct: 579 NSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 209/440 (47%), Gaps = 43/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L    +     +    L   + S G  P +YT++ +IN  CK G+      V
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LRS  +P++ T+ SL+   C +   +E   +F+  R     PD+  ++++++   R
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G+   AL  F    N   E G++  P+ V Y  +I G C++G + +A  L  +M  +  
Sbjct: 378 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DVVTY +++ G C      EA +LF EM ++G+ PD  T ++++D  CK G +  A  
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  + +  +  TYNTL+DG+     ID A++++  M S   +   +S++ L+N  C
Sbjct: 492 LFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALC 551

Query: 405 KNKDVEEALSLYSEMLSKGIKPTV-----------------------------------V 429
               + EA  ++ EM+SK IKPTV                                   +
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCI 611

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +YNTL  G  +   + +A  L  +M  ++  +  D +TYN+ + G C+   + EA  + R
Sbjct: 612 SYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLR 671

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + +     +  +Y  LI+G
Sbjct: 672 KMIERGVNPDRSTYTSLING 691



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 197/392 (50%), Gaps = 9/392 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  MLR   SP   +  ++L     K    +T  ++F  + S  + PD+   S +++ F
Sbjct: 317 VFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE-NIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G +    +    +  +   P+ V +T LI+G C +  I EA  L  +     C  DV
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNT+++GLC+      A  LF EM    G F     P++ T   +IDG CK G +  A
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTE-RGLF-----PDSYTLTILIDGHCKLGNLQNA 489

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ELF KMK++ I  DVVTY +++ GF    D + AK ++ +M+ + + P  ++FS++++ 
Sbjct: 490 MELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC  G + +A R+ + MI + + P     N++I GYC +            M S G + D
Sbjct: 550 LCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSK--GIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +SYNTLI  + K +++ +A  L  +M  K  G+ P V TYN++  G    +Q++ A  +
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
             +M    V  D  TY + I+G      + EA
Sbjct: 670 LRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 190/401 (47%), Gaps = 6/401 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S F++L     + +        F  L S G    I   + LI    ++G V   + +   
Sbjct: 156 SVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQE 215

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           I RS    N  T   ++  LC + ++ +     ++ +     PD+ TYNTLI+     G 
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  L   M +          P   TYNT+I+GLCK G  ++AKE+F +M    ++PD
Sbjct: 276 MEEAFELMHAMPSKG------FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             TY S++   C   D  E + +F +M  + V PD+V FS +M    ++G +DKA     
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +   G+ P+   Y  LI GYC    I  A  L   M   GC  DVV+YNT+++  CK K
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + EA  L++EM  +G+ P   T   L  G  ++  ++ A++LF +M+   +  D  TYN
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYN 509

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DG  K G +  A E++  +   +     +S++ L++ L
Sbjct: 510 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 197/403 (48%), Gaps = 17/403 (4%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  + +  L E CK   +GD       E   IF  M R     P +  F+ +     ++ 
Sbjct: 329 DSTTYRSLLMEACK---KGD-----AVETENIFSDM-RSRDVVPDLVCFSSMMSLFTRSG 379

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           + D  L  F  +  AGL PD   ++ILI  +C+ G +S    +   +L+     + VT+ 
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++ GLC    + EA  LF +       PD +T   LI+G C+ G+   A+ LF++M   
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   K + VTYNT++DG  K G +D AKE++  M  + I P  ++++ ++   C  
Sbjct: 500 R------IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSK 553

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
              +EA R++ EM+ + ++P V+  + ++   C++G        LE MI  G  P+  +Y
Sbjct: 554 GHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISY 613

Query: 362 NTLIDGYCLTDKIDHARKLFVSME--SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           NTLI G+   + +  A  L   ME    G + DV +YN++++ +C+   ++EA ++  +M
Sbjct: 614 NTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKM 673

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           + +G+ P   TY +L  G      +  A +  DEM +   + D
Sbjct: 674 IERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 17/202 (8%)

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWR-GVN----------------PNTYTYNTLID 366
           ++ S ++  L ++G++  A   +  MI R GV+                 N   ++ LI 
Sbjct: 104 LSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIR 163

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            +    K+  A + F  + S G    + + N LI    +   VE A  +Y E+   G+  
Sbjct: 164 TFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGV 223

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V T N +   L +  ++E+      E++   V  D  TYN  I      G + EA EL 
Sbjct: 224 NVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
            A+    +   + +YN +I+GL
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGL 305


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 211/420 (50%), Gaps = 9/420 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHSIL 148
           AL +FD M  +      V+ +N+L     K+  YD    +++RL     ++P++ T++I+
Sbjct: 205 ALKVFDEM-SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN  CK GR      +  R+ ++    +  T++SLI GLC    I  A  ++ +    + 
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D  T+N ++NG CR G    +  L+  M   N +         V+YN +I GL + G 
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-------TVVSYNILIKGLFENGK 376

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V++A  ++  +  +   P+  TY  +I G C     N+A ++F E  D   + D   +S 
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LCK G+MD+A  ++  M  RG   + +  N LI+G+    K++ A   F  ME  G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C   +VSYNTLI   CK +   EA S   EML K  KP ++T + L  GL +  ++E AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            L+ +        D   YN  + GLC    + +AL+L+  ++ S    N+V+ N L++GL
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 206/416 (49%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I++ +++     P V ++NI+   L K   +D  L +++R+       D++T+S LI+  
Sbjct: 243 IWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGL 302

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C+ G +     V   I+ S    +AVT  +++ G C   +I E+  L+       C+  V
Sbjct: 303 CEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-V 361

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            +YN LI GL   G    A++++E +          C+P + TY  +I GLCK G ++KA
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKG------CRPESTTYGVLIHGLCKNGRLNKA 415

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++F + +D     D   Y+S++ G C     +EA  +  +M  +G + D    + +++ 
Sbjct: 416 LKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLING 475

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
             +  K++ A      M  +G +P   +YNTLI G C  ++   A      M       D
Sbjct: 476 FVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPD 535

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +++ + L++  C+ K +E AL+L+ + L KG KP +  YN L  GL  + ++E AL+L+ 
Sbjct: 536 MITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYS 595

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M+R+    +  T N  ++GL K     +A E++  I       +I+SYN  I GL
Sbjct: 596 HMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 214/421 (50%), Gaps = 14/421 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E+L I++ M +        +  +++ G L +  + D  + ++K +  + L  D  TH+ 
Sbjct: 274 DESLEIWERMTKNEREKDMFTYSSLIHG-LCEAGNIDGAVRVYKEIVESSLVVDAVTHNA 332

Query: 148 LINCFCKMGRVSHGF---VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           ++N FC+ G++   F   +V+G+   +C T   V++  LIKGL    ++ EA +++    
Sbjct: 333 MLNGFCRAGKIKESFELWMVMGK--ENCQT--VVSYNILIKGLFENGKVEEAISIWELLC 388

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+  TY  LI+GLC+ G    AL +F+E  +G G      K +   Y++++DGLC
Sbjct: 389 KKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPG------KLDAYAYSSMVDGLC 442

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           KEG +D+A  +  +M       D      +I GF  A+   +A   F EM  +G  P +V
Sbjct: 443 KEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIV 502

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           +++ ++  LCK  +  +A   ++ M+ +   P+  T + L+DG C   KI+ A  L+   
Sbjct: 503 SYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQA 562

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
              G   D+  YN L++  C    +E+AL LYS M      P +VT NTL  GL+++   
Sbjct: 563 LDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDY 622

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A +++D + ++ +  D  +YN  I GLC    + +A+E      +       V++N L
Sbjct: 623 EKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNIL 682

Query: 505 I 505
           +
Sbjct: 683 V 683



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 211/455 (46%), Gaps = 39/455 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL  F  M  +    P V S+N L     +   +D   S  +   S  + P++ T++I
Sbjct: 97  NKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNI 156

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   CK  ++     +L  +      P+  ++ +LI G+     ++ A  +F +  V  
Sbjct: 157 LIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRG 216

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              DV  YN LI+G  + G       ++E +      +     PN VTYN +I+GLCK G
Sbjct: 217 VVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVY-----PNVVTYNIMINGLCKCG 271

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D++ E++ +M       D+ TY+S+I G C A + + A R++ E+++  +  D VT +
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHN 331

Query: 328 VIMDELCK----------------------------------NGKMDKASRLLELMIWRG 353
            +++  C+                                  NGK+++A  + EL+  +G
Sbjct: 332 AMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKG 391

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             P + TY  LI G C   +++ A K+F   E      D  +Y+++++  CK   ++EA+
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAI 451

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           S+ ++M  +G K      N L  G     ++E A+  F EM     +    +YN  I GL
Sbjct: 452 SIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGL 511

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK+    EA    + + + +++ ++++ + L+DGL
Sbjct: 512 CKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 142/254 (55%), Gaps = 6/254 (2%)

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRL--FIEM 314
           T+I    K    +KA + F  M+D     P V +Y +++  F   N+W+ A+    + E 
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           MD  V P++ T+++++   CK  +++KA  LL+ M  + + P+ ++Y TLI+G      +
Sbjct: 145 MD--VSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDL 202

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNT 433
             A K+F  M   G + DV  YN LI+ + K+ D ++   ++  ++    + P VVTYN 
Sbjct: 203 LGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNI 262

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GL +  + + +L++++ M +N    D +TY++ I GLC++G +  A+ +++ I +S 
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 494 YELNIVSYNCLIDG 507
             ++ V++N +++G
Sbjct: 323 LVVDAVTHNAMLNG 336



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + S+N L   L K + +    S  K +      PD+ T S+L++  C+  ++     +
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNL 558

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             + L   F P+   +  L+ GLC+  ++ +A  L++  +   C P++ T NTL+ GL +
Sbjct: 559 WQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK 618

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  +++ +            P+ ++YN  I GLC    +  A E      +  I
Sbjct: 619 VRDYEKASEIWDCILKDG------LHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGI 672

Query: 285 NPDVVTYTSVIRG 297
            P  VT+  ++R 
Sbjct: 673 LPTAVTWNILVRA 685



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL ++ +M R    P  V+  N L   L K + Y+    ++  +   GL PDI +++I 
Sbjct: 589 DALQLYSHMKRSTCVPNLVTR-NTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNIT 647

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           I   C   R+S     L   L     P AVT+  L++ 
Sbjct: 648 IKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 213/402 (52%), Gaps = 16/402 (3%)

Query: 91  LCI--FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           LC+  F  M+        V S  I+   L +         L   + + G+ P ++T++ L
Sbjct: 164 LCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTL 223

Query: 149 INCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +N  C + +   G   +LG + R     + VT+T LI+   +  RI EA  ++ +     
Sbjct: 224 LNA-CVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERN 282

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLC 264
            E DV+ Y ++I+  CR G+   A  LF+EM         +C+   PNT T+  +I G+C
Sbjct: 283 VEMDVYVYTSMISWNCRAGNVRRASALFDEM---------ICRGIVPNTXTFGALISGVC 333

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G ++ A+ L  +M+ + ++ +VV + +++ G+C     +EA RL   M  +G + DV 
Sbjct: 334 KAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVF 393

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++++   LCK  + ++A R+L +M+ +GV PN  T  T I+ YC    +    +   ++
Sbjct: 394 TYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNI 453

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E  G + ++V+YNTLI+ Y KN+ V++A  L +EM+ KG+ P V TY +L  G   + +V
Sbjct: 454 EKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKV 513

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           + ALKLF+EM    +  +  TY   I GL K G   EAL+L+
Sbjct: 514 DEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLY 555



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 183/374 (48%), Gaps = 12/374 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L       K  + V  +   +   G+   + T++ILI  +    R+     V
Sbjct: 215 PTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKV 274

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +       +   +TS+I   C    +  A+ALF +       P+  T+  LI+G+C+
Sbjct: 275 YEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCK 334

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKP---NTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            G    A  L EEM          CK    N V +NT++DG CK G +D+A  L   M+ 
Sbjct: 335 AGQMEAAEILLEEMQ---------CKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMER 385

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           +    DV TY  +  G C  + + EAKR+   M+++GV P+VVT +  ++  C+ G + +
Sbjct: 386 KGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAE 445

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
             R L  +  RGV PN  TYNTLID Y   +K+  A  L   M   G + DV +Y +LI+
Sbjct: 446 PERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIH 505

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C    V+EAL L++EML KGI+  V TY  +  GL +  + + ALKL+DEM R  +  
Sbjct: 506 GECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIP 565

Query: 462 DTYTYNNFIDGLCK 475
           D   +   +  L K
Sbjct: 566 DDRVFEALVGSLHK 579



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 191/425 (44%), Gaps = 21/425 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS-- 146
           +AL +FDY++         S F        K    +  +  F+R+  +G   DI   S  
Sbjct: 134 DALKVFDYVMEKGLVVEGRSCFX------KKCNKVELCVRFFRRMVESGRV-DIGVQSLT 186

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR---IMEAAALFTKH 203
           I+++  C+ G V     ++  +      P   T+ +L+           + E   L  + 
Sbjct: 187 IVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMERE 246

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            V A    + TY  LI     +     A  ++EEM   N E  V    + +++N      
Sbjct: 247 GVVA---SLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWN------ 297

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C+ G V +A  LF +M    I P+  T+ ++I G C A     A+ L  EM  +GV  +V
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           V F+ +MD  CK G MD+A RL ++M  +G   + +TYN L  G C   + + A+++   
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNV 417

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   +VV+  T I  YC+  ++ E       +  +G+ P +VTYNTL     +  +
Sbjct: 418 MVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEK 477

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V++A  L  EM    +  D +TY + I G C    V EAL+LF  +       N+ +Y  
Sbjct: 478 VKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTA 537

Query: 504 LIDGL 508
           +I GL
Sbjct: 538 IISGL 542


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 211/417 (50%), Gaps = 21/417 (5%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PPP  +F++L    AK+   +  +  F ++   G  PD++T++ +++   +         
Sbjct: 130 PPP--TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALA 187

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V  ++L+  + PN  TF  L+ GLC   +  +A  +F +       P+   Y  +++GLC
Sbjct: 188 VYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +   T     L   M          C P+++T N ++DG CK G +D+A  L    + E 
Sbjct: 248 QAKRTDDVHRLLNTMKVSG------CCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
               +  Y+S+I G   A  ++E +    +M   G++PDVV +++++   C+ G +D A 
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L  M  RG++P+TY YN LI G+C    +D AR L + +  N C     +Y  LI   
Sbjct: 362 NMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGM 421

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--------- 454
           C+N  ++EA  ++++M + G  P+++T+N L  GL +  ++E A  LF +M         
Sbjct: 422 CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLF 481

Query: 455 -RRNHVA---ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            R +  A    DT +    ++ LC+SG +L+A +L   + DS    +I++YN LI+G
Sbjct: 482 LRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLING 538



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 211/416 (50%), Gaps = 22/416 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           +  ++ L   L + K YD V    +++  AG+ PD+  ++ILI  FC++G V +   +L 
Sbjct: 306 IKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLN 365

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + +   +P+   + +LIKG C    + +A +L  +     C P   TY  LI G+CR G
Sbjct: 366 DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNG 425

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +F +M N      + C P+ +T+N +IDGLCK G +++A+ LF KM+    NP
Sbjct: 426 LLDEARQIFNQMEN------LGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGK-NP 478

Query: 287 --------------DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
                         D  +  +++   C +    +A +L +++ D GV PD++T++V+++ 
Sbjct: 479 SLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLING 538

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK   ++ A +L   +  +G +P++ TY TLIDG+   D+ + A ++   M  NGC   
Sbjct: 539 FCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPS 598

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
              Y  L+ W C+   +  A SL+ + L + +         L    FE  ++E+A++   
Sbjct: 599 SAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGELEKAVRCLL 657

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM       +   Y  ++ GLC++    EAL++F  +++ + ++N  S   LI+GL
Sbjct: 658 EMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGL 713



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
           F    TH+++I+   K       + +L  +  S       TF+ LI          +A  
Sbjct: 93  FRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVE 152

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
            F K + F C+PDVFTYN++++ + +    ++AL ++ +M   N        PN  T+  
Sbjct: 153 SFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN------YNPNRATFVI 206

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +++GLCK G  D A ++F +M  + I P+ + YT ++ G C A   ++  RL   M   G
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSG 266

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD +T + ++D  CK G++D+A  LL+L    G       Y++LIDG     + D  +
Sbjct: 267 CCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQ 326

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +    M   G   DVV Y  LI  +C+   V+ AL++ ++M  +G+ P    YN L  G 
Sbjct: 327 EWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGF 386

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
            ++  +++A  L  E+ +N     + TY   I G+C++G + EA ++F  + +     +I
Sbjct: 387 CDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSI 446

Query: 499 VSYNCLIDGL 508
           +++N LIDGL
Sbjct: 447 MTFNALIDGL 456



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 188/390 (48%), Gaps = 10/390 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  + IL     +    D  L++   +   GL PD Y ++ LI  FC +G +     +
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              I ++   P + T+T LI G+C    + EA  +F +     C P + T+N LI+GLC+
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 225 TGHTIVALNLFEEMANGNG-------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            G    A +LF +M  G           G     +T +  T+++ LC+ G + KA +L +
Sbjct: 459 AGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLM 518

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           ++ D  + PD++TY  +I GFC A + N A +LF E+  +G  PD VT+  ++D   +  
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS-MESNGCMHDVVSY 396
           + + A R+L+ M+  G  P++  Y  L+   C   K+  A  L++  + S     D    
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETL- 637

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
             L   + +  ++E+A+    EM  K     +  Y    +GL +  + E ALK+F  ++ 
Sbjct: 638 -KLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKE 696

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             +  +  +    I+GLCK G +  A+++F
Sbjct: 697 CQMDVNPPSCVMLINGLCKDGNLEMAVDIF 726



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 56/356 (15%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-------------N 134
           +EA  IF+ M  +  SP  + +FN L   L K    +    LF ++              
Sbjct: 428 DEARQIFNQMENLGCSPS-IMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486

Query: 135 SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
            A    D  +   ++   C+ G +   + +L ++  S   P+ +T+  LI G C    I 
Sbjct: 487 GADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNIN 546

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
            A  LF + ++    PD  TY TLI+G  R      A  + ++M   NG     C P++ 
Sbjct: 547 GAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK-NG-----CTPSSA 600

Query: 255 TYNTIIDGLCKEGFVDKAKELFLK-------MKDENI----------------------- 284
            Y  ++   C++G +  A  L+LK        +DE +                       
Sbjct: 601 VYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMN 660

Query: 285 ----NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
               N ++  YT  + G C A    EA ++F+ + +  +  +  +  ++++ LCK+G ++
Sbjct: 661 FKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLE 720

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            A  +    + +G        N L+    L DK+ HA  L   M S G  +D+  Y
Sbjct: 721 MAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG--YDLDEY 774


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 205/420 (48%), Gaps = 8/420 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +AL  F+ M+      P  ++FN L   L K+  ++    +F       +  D+Y+  
Sbjct: 111 PEQALFYFNQMIG-RGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFG 168

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+I   C++G +  GF VLG++     +PN V +T+LI G C    I     LF K    
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               + +TY  LING  + G     + L+E+M       G+V  PN  TYN++I   C +
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCND 282

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++ A ELF +M++  +  +VVTY ++I G C      EA+RL   M   G+ P+++++
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  C  G +DKAS L   M   G +P+  TYN LI G+           +   ME+
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G     V+Y  L++   ++ ++E+A  +YS M   G+   +  Y  L  GL  +  ++ 
Sbjct: 403 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 462

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           A KLF  +   H+  +   YN  I G CK G    AL L + + ++    N+ SYN  I 
Sbjct: 463 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQ 522



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 49/419 (11%)

Query: 129 LFKRLNSAGL--FP-DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           LF  L    L  FP  +  H  +IN   +            +++     P + TF +L+ 
Sbjct: 79  LFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLI 138

Query: 186 GLCAESRIMEAAALF--TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
            L   +   +A  +F  TK  V   + DV+++  +I G C  G+      +  +M     
Sbjct: 139 LLIKSNFFEKAWRVFNETKGNV---KLDVYSFGIMIKGCCEVGYLDKGFEVLGQME---- 191

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           E G+   PN V Y T+IDG CK G +++ K+LF KM + ++  +  TYT +I GF     
Sbjct: 192 EMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGL 249

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             +   L+ +M   G+ P+V T++ ++   C +GK++ A  L + M  RGV  N  TYNT
Sbjct: 250 KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNT 309

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G C   ++  A +L   M+ +G   +++SYNTLI+ YC   ++++A SL+++M S G
Sbjct: 310 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 369

Query: 424 IKPTVVTYNTLFLGLFEIH-----------------------------------QVERAL 448
             P++ TYN L  G  E                                      +E+A 
Sbjct: 370 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 429

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++  M +  + AD Y Y   I GLC  G + EA +LF+++ +   + N V YN +I G
Sbjct: 430 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYG 488



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 171/377 (45%), Gaps = 42/377 (11%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +   M  M  SP  V    ++ GC  KN   +    LF ++    +  + YT+++LIN F
Sbjct: 186 VLGQMEEMGLSPNVVVYTTLIDGC-CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGF 244

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            KMG    G  +  ++  +   PN  T+ S+I   C + ++  A  LF + R      +V
Sbjct: 245 FKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNV 304

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNTLI GLC+    + A  L   M            PN ++YNT+IDG C  G +DKA
Sbjct: 305 VTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIGNLDKA 358

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF +MK    +P + TY  +I GF  A +      +  EM  +G+ P  VT++++MD 
Sbjct: 359 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 418

Query: 333 L-----------------------------------CKNGKMDKASRLLELMIWRGVNPN 357
           L                                   C  G M +AS+L + +    + PN
Sbjct: 419 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 478

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
              YNT+I GYC       A +L   M  NG + +V SYN+ I   CK++   EA  L  
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538

Query: 418 EMLSKGIKPTVVTYNTL 434
           +M+  G+KP++  +N +
Sbjct: 539 DMIELGLKPSISIWNMI 555


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 218/405 (53%), Gaps = 12/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK---MGRVSHGFV 163
           V S  I+   L K    +    L   + + G+  ++ T++  I  + K   +G V+    
Sbjct: 225 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 284

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ +   +C   N VT+T LI G     +I EA  LF + R    E DV+ Y ++I+  C
Sbjct: 285 LMEKEGVAC---NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNC 341

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R+G+   AL LF+EM +     G++  P+  TY  +I G+CK G ++ A+ L  +M+ + 
Sbjct: 342 RSGNVKRALVLFDEMTDK----GLI--PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+ + V + ++I G+C +   +EA RL + M  +G++ DV  ++ I   LCK  + D+A 
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 455

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M+ RGV+PNT ++ TLID YC       A+++F  ME  G + ++++YN LI+ Y
Sbjct: 456 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 515

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +++EA  L  E+ ++G+ P V T  +L  G     +V+ ALKLFDEM +  +  + 
Sbjct: 516 SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNV 575

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   I GL K G   EA +L+  ++++    +   Y+ L+  L
Sbjct: 576 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 195/437 (44%), Gaps = 47/437 (10%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++LF   A NK +   L  F+ +   G   D  +  + +    + G+V        R++
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT---G 226
                    + T ++ GLC    +     L  +      + +V TYN  I G  +    G
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                L L E+        GV C  N VTY  +I G    G +++A+ LF +M+++ I  
Sbjct: 278 GVAEILTLMEKE-------GVAC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA 328

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV  YTS+I   C + +   A  LF EM D+G+ P   T+  ++  +CK G+M+ A  L+
Sbjct: 329 DVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLV 388

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN--------- 397
             M  +G++ N   +NTLIDGYC +  +D A +L V ME  G   DV +YN         
Sbjct: 389 NEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKL 448

Query: 398 --------------------------TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                                     TLI+ YCK  +  EA  ++ EM  KG  P ++TY
Sbjct: 449 NRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 508

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N L  G  +   ++ A KL DE+    +  D YT  + I G C  G V  AL+LF  +  
Sbjct: 509 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 568

Query: 492 SKYELNIVSYNCLIDGL 508
                N+V+Y  +I GL
Sbjct: 569 RGLVPNVVTYTAMISGL 585



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 7/276 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M       P   ++  L   + K    +    L   +   G+  +    + LI
Sbjct: 349 ALVLFDEMTD-KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +C+ G V     +   + +     +   + S+  GLC  +R  EA  L          
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 467

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  ++ TLI+  C+ G+ + A  +F EM     E G V  PN +TYN +IDG  K G +
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREME----EKGNV--PNIITYNVLIDGYSKRGNM 521

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A +L  ++++  + PDV T TS+I G C     + A +LF EM  +G+ P+VVT++ +
Sbjct: 522 KEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 581

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +  L K+G+ ++A +L + M   G+ P+   Y++L+
Sbjct: 582 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 6/159 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   SF  L     K  ++     +F+ +   G  P+I T+++LI+ + K G +     +
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 527

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T TSLI G C + ++  A  LF +       P+V TY  +I+GL +
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            G +  A  L++EM     E G+   P+   Y++++  L
Sbjct: 588 DGRSEEAFKLYDEMK----ETGLT--PDDTVYSSLVGSL 620


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 202/412 (49%), Gaps = 10/412 (2%)

Query: 101 HPSPPPVS-SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           HP   P + S N L   L   +  D     FK      + PD++T +I+I+  CK G++ 
Sbjct: 143 HPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLR 202

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR---IMEAAALFTKHRVFACEPDVFTYN 216
               V   I      P+ VT+ ++I G C   R   +    AL  +       P+  T+N
Sbjct: 203 KAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFN 262

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L+NG C+  +T  A+ +FEEM     + G+    + VTY+ ++ GLC EG V++  +L 
Sbjct: 263 VLVNGYCKDSNTAAAVRVFEEMK----QQGIAA--SVVTYSALVWGLCSEGKVEEGVKLV 316

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +MKD  + P++ T  SV+ GFC      +A+     M  + V+P+VVT+++++D   + 
Sbjct: 317 DEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRL 376

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
            KM  A  + E M  +GV PN   YN LI G+           L   M   G   D+V+Y
Sbjct: 377 DKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTY 436

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N LI   C   +V +A+ L  EML  G++P  +TYNT+  G  E   ++ A ++   M +
Sbjct: 437 NVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               A+  TYN FI  LC+ G + E  EL   + +     N V+Y+ + +G+
Sbjct: 497 GKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 186/385 (48%), Gaps = 45/385 (11%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           F   LR   SP  + +FNI+   L K         + K + + GL P + T++ +I+ +C
Sbjct: 173 FKAALRRRVSPD-LFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYC 231

Query: 154 KMGRVS---HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
           K GR     H   +L  ++ +  +PN VTF  L+ G C +S    A  +F + +      
Sbjct: 232 KRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAA 291

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
            V TY+ L+ GLC  G     + L +EM     + G+V  PN  T N++++G CK+G + 
Sbjct: 292 SVVTYSALVWGLCSEGKVEEGVKLVDEMK----DLGLV--PNLATLNSVLNGFCKKGMMT 345

Query: 271 KAKELFLKMKDENINPDVVTYT-----------------------------------SVI 295
            A+     M+ +N+ P+VVTYT                                    +I
Sbjct: 346 DAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLI 405

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            GF    DW     L  EM  +GV+ D+VT++V++  LC  G++ KA +LL+ M+  G+ 
Sbjct: 406 AGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLE 465

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P   TYNT+I+GYC    I  A ++   ME      +VV+YN  I   C+   +EE   L
Sbjct: 466 PVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNEL 525

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFE 440
            +EML KG+ P  VTY+T+  G+ E
Sbjct: 526 LNEMLEKGLVPNGVTYDTIKEGMME 550



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 58/131 (44%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +RM      + ++N+L G L         + L   +   GL P   T++ +IN +C+ G 
Sbjct: 424 MRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGN 483

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   + +  R+ +     N VT+   IK LC   ++ E   L  +       P+  TY+T
Sbjct: 484 IKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDT 543

Query: 218 LINGLCRTGHT 228
           +  G+   G+T
Sbjct: 544 IKEGMMEKGYT 554


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 213/396 (53%), Gaps = 11/396 (2%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCF 152
           F  M+  +     V S  ++   L +    +    L   +   G+  P+++T++ L+N +
Sbjct: 203 FHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAY 262

Query: 153 CKMGRVSHGFV--VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             +GR     V  +L  + +     +  T++ LI+   +   I EA  +F + R    E 
Sbjct: 263 --VGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEM 320

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           DV+ Y+++I+   R G+   A  LF+EM+  +        PN  TY  +I G+CK G ++
Sbjct: 321 DVYVYSSMISWSRRLGNMKRAFALFDEMSQRD------IVPNAHTYGALIGGVCKAGQME 374

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            A+ L L+M+ + ++ ++V + + + G+C     +EA RL   M  +G+  DV T++++ 
Sbjct: 375 AAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILA 434

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           + LCK  + D+A  +L  M+ +GV PN  T+   I+ YC    +  A +LF  ME  G +
Sbjct: 435 NGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEV 494

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            ++++YNTLI+ YCK + V++A  + SEM++KG+ P + TY++L  G   + +V+ ALKL
Sbjct: 495 PNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKL 554

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           F+EMR   +  +  TY + I GL K G   EA +L+
Sbjct: 555 FNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLY 590



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 188/383 (49%), Gaps = 6/383 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + D M+      P V ++N L       K    V  + K +    +   + T+SILI  +
Sbjct: 238 LMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWY 297

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
              G +     +   +       +   ++S+I        +  A ALF +       P+ 
Sbjct: 298 SSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNA 357

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY  LI G+C+ G    A  L  EM +   +       N V +NT +DG C+ G +D+A
Sbjct: 358 HTYGALIGGVCKAGQMEAAEILLLEMQSKGVDL------NLVIFNTTMDGYCRRGKMDEA 411

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L   M+ + IN DV TY  +  G C  + ++EAK +   M+++GV+P+VVTF++ ++ 
Sbjct: 412 LRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEI 471

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G + +A RL   M  +G  PN  TYNTLID YC  +K+  A K+   M + G + D
Sbjct: 472 YCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPD 531

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y++LI+  C    V+EAL L++EM  KGI   V TY ++  GL +  + + A KL+D
Sbjct: 532 LYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYD 591

Query: 453 EMRRNHVAADTYTYNNFIDGLCK 475
           EM +  +  D   + + +    K
Sbjct: 592 EMMKIGLIPDDRVFTSLVGSFHK 614



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 208/426 (48%), Gaps = 15/426 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP-DIYTHS 146
           +E + ++DY+          S F +L   L +    D  +  F R+  +  F   + + +
Sbjct: 162 DETIRVYDYVEEKGLVIEERSCFVLLLA-LKRCGEVDFCVRFFHRMVESNKFEIRVQSLT 220

Query: 147 ILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIK---GLCAESRIMEAAALFTK 202
           ++I+  C+ G V     ++  ++ +    PN  T+ +L+    G      + E   L  K
Sbjct: 221 LVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEK 280

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            +V      V TY+ LI     +G    A  +FEEM   N E  V        Y+++I  
Sbjct: 281 EQVVF---SVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVY------VYSSMISW 331

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             + G + +A  LF +M   +I P+  TY ++I G C A     A+ L +EM  +GV  +
Sbjct: 332 SRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLN 391

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +V F+  MD  C+ GKMD+A RL  +M  +G+N + +TYN L +G C   + D A+ +  
Sbjct: 392 LVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILN 451

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           SM   G   +VV++   I  YCK  ++ EA  L+ +M  KG  P ++TYNTL     +  
Sbjct: 452 SMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKE 511

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +V++A K+  EM    +  D YTY++ I G C  G V EAL+LF  +R      N+ +Y 
Sbjct: 512 KVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYT 571

Query: 503 CLIDGL 508
            +I GL
Sbjct: 572 SMISGL 577


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 215/462 (46%), Gaps = 60/462 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN+L G L  + H +    LF ++ + G  P+ +T  IL+  +C+ G  S G  +
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           LG++      PN V + +LI   C E +  +A  L  K R     P V T+N+ I+ LC 
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G  + A  +F +M   + E G+   PN +TY  ++ G CKEG +++AK L   MK    
Sbjct: 265 SGKILEASRIFRDMQI-DEELGLP-HPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN 322

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++ +Y   + G        EA  +  EM+  G++PD+ +++++MD LCKNG +  A  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC----------MH--- 391
           L+ LMI  G+ P+T TY+TL+ GYC   K+  A  L   M SN C          +H   
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLW 442

Query: 392 ----------------------DVVSYNTLINWYCKNKDVEEALSLYSEMLSKG------ 423
                                 D V+ N +IN  C N  +++A+ + + M + G      
Sbjct: 443 KEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGN 502

Query: 424 -----------------IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
                              P +VTY+T+  GL +  +++ A K F EM    +  D+  Y
Sbjct: 503 LGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + FI   C+ G +  A ++ + +        + +YN LI GL
Sbjct: 563 DTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGL 604



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 223/443 (50%), Gaps = 31/443 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  + D M R + +   + S+NI    L +N        + K +   G+ PDIY+++I+
Sbjct: 309 EAKTLVDTMKR-NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIV 367

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G +S   +++G ++R+   P+ VT+++L+ G C++ ++ EA  L  +     C
Sbjct: 368 MDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNC 427

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+ +T N L++ L + G    A NL ++M N  G +GV    +TVT N II+ LC  G 
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKM-NEKG-YGV----DTVTCNIIINALCNNGQ 481

Query: 269 VDKAKEL------------------FLKMKDENIN-----PDVVTYTSVIRGFCYANDWN 305
           +DKA E+                  F+ + D+ I+     PD+VTY+++I G C A   +
Sbjct: 482 LDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLD 541

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +AK+ FIEMM +G+QPD   +   +   C+ GK+  A ++L+ M  RG N    TYN+LI
Sbjct: 542 DAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLI 601

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G    ++I     L   M   G   DV +YN ++N  C+   + +A S+  EML KGI 
Sbjct: 602 LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGIS 661

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P + ++  L     +    + + ++F E+  N        Y    + L   G V EA EL
Sbjct: 662 PNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEAKEL 720

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           F    D  +++    Y  LID L
Sbjct: 721 FETALDRSFDIGNFLYKDLIDRL 743



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 200/404 (49%), Gaps = 16/404 (3%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPD----IYTHSILINCFCKMGRVSHGFVVLGRI 168
           L   LAK+  ++  +S FK L S   FP+    IY +++L+    +  RV     +   +
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSN--FPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDM 138

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           + +  +P A TF  LI  LC    + +A  LF K     CEP+ FT+  L+ G CR G  
Sbjct: 139 VLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLA 198

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
              L L  +M       G++  PN V YNT+I   CKEG    A++L  KM+++ + P V
Sbjct: 199 SKGLELLGQMRT----MGIL--PNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHV 252

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEM-MDQGV---QPDVVTFSVIMDELCKNGKMDKASR 344
            T+ S I   C +    EA R+F +M +D+ +    P+V+T+ +++   CK G +++A  
Sbjct: 253 ETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKT 312

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L++ M       N  +YN  + G     K+  A  +   M   G   D+ SYN +++  C
Sbjct: 313 LVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLC 372

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  + +A  L   M+  GI P  VTY+TL  G     +V  A  L  EM  N+ + +TY
Sbjct: 373 KNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTY 432

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T N  +  L K G + EA  L + + +  Y ++ V+ N +I+ L
Sbjct: 433 TCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINAL 476



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 198/407 (48%), Gaps = 11/407 (2%)

Query: 88  NEALCIFDYMLRMHPSPPP-VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           N+A+  F  +    P   P +  +N+L     +    + V  L+K +  A + P+ YT +
Sbjct: 92  NKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFN 151

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +LI   C  G +     +  ++      PN  TF  L++G C      +   L  + R  
Sbjct: 152 LLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM 211

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P+   YNTLI+  C+ G T  A  L ++M     E G+V  P+  T+N+ I  LC  
Sbjct: 212 GILPNNVLYNTLISSFCKEGKTHDAEKLVDKMR----EDGLV--PHVETFNSRISALCGS 265

Query: 267 GFVDKAKELFLKMK-DENI---NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           G + +A  +F  M+ DE +   +P+V+TY  ++ GFC      EAK L   M       +
Sbjct: 266 GKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFIN 325

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           + ++++ +  L +NGK+ +A  +L+ M+  G+ P+ Y+YN ++DG C    +  AR L  
Sbjct: 326 LESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMG 385

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M  NG + D V+Y+TL++ YC    V EA +L  EM+S    P   T N L   L++  
Sbjct: 386 LMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEG 445

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           ++  A  L  +M       DT T N  I+ LC +G + +A+E+   +
Sbjct: 446 RISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 153/369 (41%), Gaps = 65/369 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV------ 158
           P   + N+L   L K        +L +++N  G   D  T +I+IN  C  G++      
Sbjct: 429 PNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488

Query: 159 -----SHGFVVLGRILRSCF------------TPNAVTFTSLIKGLCAESRIMEAAALFT 201
                +HG   LG +  S              TP+ VT++++I GLC   R+ +A   F 
Sbjct: 489 VNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFI 548

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
           +      +PD   Y+T I+  CR G    A  + ++M          C     TYN++I 
Sbjct: 549 EMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG------CNKTLQTYNSLIL 602

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GL  +  + +   L  +M+++ ++PDV TY  ++   C     N+A  +  EM+ +G+ P
Sbjct: 603 GLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISP 662

Query: 322 DVVTFSVIMDELCK----------------------------------NGKMDKASRLLE 347
           ++ +F +++   CK                                   GK+ +A  L E
Sbjct: 663 NISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFE 722

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK-- 405
             + R  +   + Y  LID  C  +K++ A  +   +   G   D  S+  +I+ + K  
Sbjct: 723 TALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMG 782

Query: 406 NKDVEEALS 414
           NK V + L+
Sbjct: 783 NKHVADELA 791



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 40/280 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +++ +   L K    D     F  + S GL PD   +   I+ FC+ G++S  F V
Sbjct: 522 PDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQV 581

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +        T+ SLI GL ++++I E   L  + R     PDV TYN ++N LC 
Sbjct: 582 LKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCE 641

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE------------------ 266
            G    A ++ +EM     + G+   PN  ++  +I   CK                   
Sbjct: 642 GGRINDAPSVLDEML----QKGI--SPNISSFRILIKAFCKACDFKASHEVFEIALNVCG 695

Query: 267 ----------------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
                           G V +AKELF    D + +     Y  +I   C       A  +
Sbjct: 696 HKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDV 755

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
              ++D+G Q D  +F  ++D   K G    A  L E M+
Sbjct: 756 LHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMM 795



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 18/217 (8%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           +++ G  +KN+ ++ +  L   +   G+ PD+ T++ ++NC C+ GR++    VL  +L+
Sbjct: 599 SLILGLGSKNQIFE-LYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQ 657

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF-----ACEPDVFTYNTLINGLCRT 225
              +PN  +F  LIK  C      +A      H VF      C      Y  + N L   
Sbjct: 658 KGISPNISSFRILIKAFC------KACDFKASHEVFEIALNVCGHKEALYTLMFNELLVG 711

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           G    A  LFE   + + + G         Y  +ID LCK+  ++ A ++  ++ D+   
Sbjct: 712 GKVAEAKELFETALDRSFDIG------NFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQ 765

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            D  ++  VI GF    + + A  L   MM+   + +
Sbjct: 766 FDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 192/368 (52%), Gaps = 10/368 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+AL IF  M+ M   P     + ++ G L K    D   S F+++  +G  PD  T+++
Sbjct: 31  NKALQIFHQMIDMKVKPDAFL-YTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTV 89

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++   K  +   G  +   +L    +P  VT+ +++ G C   RI +A +L  + +   
Sbjct: 90  LVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTG 149

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    Y+TLI+GLC+      A  LFE MA G+ +       + + Y + I GLCK G
Sbjct: 150 RSPSGSLYSTLIDGLCKHDRHEEARELFE-MAAGDVQ-------DVIVYTSFISGLCKAG 201

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+AK + +KM +    PD V+Y  +I   C  N  +EAK L  + M++   P V   +
Sbjct: 202 KLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCT 261

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVN-PNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           V++D LCK+ ++++A  +LE M+  G   P+  TY+ +IDG C  D++D A  +   M  
Sbjct: 262 VLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRR 321

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            GC+ DVV+Y  +I+ +CK   ++EA  L+  M  +G    VV YN L  G     +V+ 
Sbjct: 322 AGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDE 381

Query: 447 ALKLFDEM 454
           A+ + +EM
Sbjct: 382 AIAMIEEM 389



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 192/381 (50%), Gaps = 11/381 (2%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L   + +AG+ P I T   LI   C++   +    +  +++     P+A  +T +I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGV 247
             +++  AA+ F +     C PD  TY  L++ L +         +FEEM + G+     
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH----- 115

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
              P  VTY T+++G CK G +D+A  L  ++K    +P    Y+++I G C  +   EA
Sbjct: 116 --SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEA 173

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           + LF EM    VQ DV+ ++  +  LCK GK+D+A  +   MI  G  P+  +YN +I  
Sbjct: 174 RELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 231

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-P 426
            C  +++  A++L        CM  V     L++  CK++ VEEA  +   ML  G + P
Sbjct: 232 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAP 291

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +VVTY+ +  GL +  +++ A  +  +MRR     D  TY   ID  CK G + EA ELF
Sbjct: 292 SVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 351

Query: 487 RAIRDSKYELNIVSYNCLIDG 507
           + + +     ++V+YN LI G
Sbjct: 352 QRMHERGCASDVVAYNILIRG 372



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 196/383 (51%), Gaps = 9/383 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +F  L   L +    +  L +F ++    + PD + ++++I   CK+ ++      
Sbjct: 12  PTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 71

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++++S   P+ VT+T L+  L    +  +   +F +       P++ TY T++NG C+
Sbjct: 72  FEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 131

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+L   +  G G       P+   Y+T+IDGLCK    ++A+ELF +M   ++
Sbjct: 132 AGRIDQALSLMRRL-KGTGR-----SPSGSLYSTLIDGLCKHDRHEEARELF-EMAAGDV 184

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DV+ YTS I G C A   +EAK + ++M++ G  PD V+++VI+  LCK+ ++ +A  
Sbjct: 185 Q-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 243

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWY 403
           L++  + R   P       L+DG C + +++ A  +   M E+      VV+Y+ +I+  
Sbjct: 244 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGL 303

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   +++A  +  +M   G  P VVTY  +     ++ +++ A +LF  M     A+D 
Sbjct: 304 CKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDV 363

Query: 464 YTYNNFIDGLCKSGFVLEALELF 486
             YN  I G C++  V EA+ + 
Sbjct: 364 VAYNILIRGYCRAAKVDEAIAMI 386



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 9/311 (2%)

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L  + +     P + T+ +LI  LC    T  AL +F +M +      +  KP+   Y  
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMID------MKVKPDAFLYTV 54

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I  LCK   +D A   F +M      PD VTYT ++     A  W +  ++F EM+ +G
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P++VT++ +++  CK G++D+A  L+  +   G +P+   Y+TLIDG C  D+ + AR
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR 174

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +LF    + G + DV+ Y + I+  CK   ++EA +++ +M+  G  P  V+YN +   L
Sbjct: 175 ELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 232

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA-LELFRAIRDSKYELN 497
            + ++V  A +L D+                +DGLCKS  V EA + L R +       +
Sbjct: 233 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPS 292

Query: 498 IVSYNCLIDGL 508
           +V+Y+ +IDGL
Sbjct: 293 VVTYSAVIDGL 303


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D+Y+  I+I   C+ G +   F +L  +    F+PN V +T+LI G C    I +A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +   F    + +TY  LI+GL + G       ++E+M     E GV   PN  TYN ++
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ----EDGVF--PNLYTYNCVM 275

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           +  CK+G    A +LF +M++  ++ ++VTY ++I G C     NEA ++  +M   G+ 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+++T++ ++D  C  GK+ KA  L   +  RG++P+  TYN L+ G+C       A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              ME  G     ++Y  LI+ + +  ++E+A+ L S M   G+ P V TY+ L  G   
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
             Q+  A +LF  M    +  +   YN  + G CK G    AL LFR + + +   N+ S
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 501 YNCLIDGL 508
           Y  +I+ L
Sbjct: 516 YRYMIEVL 523



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 209/422 (49%), Gaps = 21/422 (4%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +  Y+     S      + ++     +++  D+ +S F  +   G  P         NCF
Sbjct: 80  LLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGS-------NCF 132

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAV-------TFTSLIKGLCAESRIMEAAALFTKHRV 205
             +     G     +  R  F  + +       +F  +IKG C    I ++  L  + R 
Sbjct: 133 NNLLTFVVGSSSFNQWWR-FFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE 191

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F   P+V  Y TLI+G C+ G    A +LF EM    G+FG+V   N  TY  +I GL K
Sbjct: 192 FGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM----GKFGLVA--NEWTYTVLIHGLFK 245

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G   +  E++ KM+++ + P++ TY  V+   C      +A +LF EM ++GV  ++VT
Sbjct: 246 NGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVT 305

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++  LC+  K ++A+++++ M   G+NPN  TYNTLIDG+C   K+  A  L   ++
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
           S G    +V+YN L++ +CK  D   A  +  EM  +GIKP+ +TY  L      +  +E
Sbjct: 366 SRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNME 425

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +A++L   M    +  D +TY+  I G C  G + EA  LF+ +   K E N V YN ++
Sbjct: 426 KAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMV 485

Query: 506 DG 507
            G
Sbjct: 486 LG 487



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 203/399 (50%), Gaps = 11/399 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V SF I+     +    +    L   L   G  P++  ++ LI+  CK G +     +  
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF 222

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + +     N  T+T LI GL       +   ++ K +     P+++TYN ++N  C+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDG 282

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            T  A  LF+EM     E GV C  N VTYNT+I GLC+E   ++A ++  +MK + INP
Sbjct: 283 RTKDAFKLFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +++TY ++I GFC      +A  L  ++  +G+ P +VT+++++   CK G    A +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  RG+ P+  TY  LID +   D ++ A +L   ME  G   DV +Y+ LI+ +C  
Sbjct: 397 KEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIK 456

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             + EA  L+  M++K ++P  V YNT+ LG  +     RAL+LF EM    +  +  +Y
Sbjct: 457 GQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYE-----LNIVS 500
              I+ LCK     EA  L   + D+  +     LN++S
Sbjct: 517 RYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLIS 555



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I G  +  F   +  L    + E        Y  +I  +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKG 124

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P    F+ ++  +  +   ++  R       + V+ + Y++  +I G C   +I+ + 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L V +   G   +VV Y TLI+  CK  ++E+A  L+ EM   G+     TY  L  GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           F+    ++  +++++M+ + V  + YTYN  ++  CK G   +A +LF  +R+     NI
Sbjct: 244 FKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNI 303

Query: 499 VSYNCLIDGL 508
           V+YN LI GL
Sbjct: 304 VTYNTLIGGL 313



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 6/189 (3%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+     P + ++NIL     K         + K +   G+ P   T++ILI+ F +M  
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDN 423

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +     +   +     TP+  T++ LI G C + ++ EA+ LF        EP+   YNT
Sbjct: 424 MEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNT 483

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           ++ G C+ G +  AL LF EM            PN  +Y  +I+ LCKE    +A+ L  
Sbjct: 484 MVLGYCKEGSSYRALRLFREMEEKE------LPPNVASYRYMIEVLCKERKSKEAEGLVE 537

Query: 278 KMKDENINP 286
           KM D  I+P
Sbjct: 538 KMIDTGIDP 546


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 218/405 (53%), Gaps = 12/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK---MGRVSHGFV 163
           V S  I+   L K    +    L   + + G+  ++ T++  I  + K   +G V+    
Sbjct: 229 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 288

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           ++ +   +C   N VT+T LI G     +I EA  LF + R    E DV+ Y ++I+  C
Sbjct: 289 LMEKEGVAC---NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNC 345

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R+G+   AL LF+EM +     G++  P+  TY  +I G+CK G ++ A+ L  +M+ + 
Sbjct: 346 RSGNVKRALVLFDEMTDK----GLI--PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+ + V + ++I G+C +   +EA RL + M  +G++ DV  ++ I   LCK  + D+A 
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 459

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M+ RGV+PNT ++ TLID YC       A+++F  ME  G + ++++YN LI+ Y
Sbjct: 460 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 519

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +++EA  L  E+ ++G+ P V T  +L  G     +V+ ALKLFDEM +  +  + 
Sbjct: 520 SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNV 579

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TY   I GL K G   EA +L+  ++++    +   Y+ L+  L
Sbjct: 580 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 195/437 (44%), Gaps = 47/437 (10%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++LF   A NK +   L  F+ +   G   D  +  + +    + G+V        R++
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT---G 226
                    + T ++ GLC    +     L  +      + +V TYN  I G  +    G
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
                L L E+        GV C  N VTY  +I G    G +++A+ LF +M+++ I  
Sbjct: 282 GVAEILTLMEKE-------GVAC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA 332

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DV  YTS+I   C + +   A  LF EM D+G+ P   T+  ++  +CK G+M+ A  L+
Sbjct: 333 DVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLV 392

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN--------- 397
             M  +G++ N   +NTLIDGYC +  +D A +L V ME  G   DV +YN         
Sbjct: 393 NEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKL 452

Query: 398 --------------------------TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                                     TLI+ YCK  +  EA  ++ EM  KG  P ++TY
Sbjct: 453 NRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 512

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N L  G  +   ++ A KL DE+    +  D YT  + I G C  G V  AL+LF  +  
Sbjct: 513 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 572

Query: 492 SKYELNIVSYNCLIDGL 508
                N+V+Y  +I GL
Sbjct: 573 RGLVPNVVTYTAMISGL 589



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 7/276 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M       P   ++  L   + K    +    L   +   G+  +    + LI
Sbjct: 353 ALVLFDEMTD-KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + +C+ G V     +   + +     +   + S+  GLC  +R  EA  L          
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 471

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+  ++ TLI+  C+ G+ + A  +F EM     E G V  PN +TYN +IDG  K G +
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREME----EKGNV--PNIITYNVLIDGYSKRGNM 525

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A +L  ++++  + PDV T TS+I G C     + A +LF EM  +G+ P+VVT++ +
Sbjct: 526 KEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 585

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +  L K+G+ ++A +L + M   G+ P+   Y++L+
Sbjct: 586 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 6/159 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   SF  L     K  ++     +F+ +   G  P+I T+++LI+ + K G +     +
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL 531

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P+  T TSLI G C + ++  A  LF +       P+V TY  +I+GL +
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 591

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
            G +  A  L++EM     E G+   P+   Y++++  L
Sbjct: 592 DGRSEEAFKLYDEMK----ETGLT--PDDTVYSSLVGSL 624


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 206/404 (50%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++++L     KN + +     +  + + G+   +Y+ + ++  + K     + F +
Sbjct: 178 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 237

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               L S    N  TF +L+  LC E ++ EA  L+ +       P+V +YN +I G CR
Sbjct: 238 FNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 296

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             +   A  +++EM + NG       PN VT+  ++DG  K+G ++ A  +F +MKD NI
Sbjct: 297 KDNINAACKVYKEMLD-NG-----FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   T   +I+G C A    E + LF + + QG  P  + ++ I+D   K G ++ AS 
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M   G+ P+T TY +LIDG+C  + ID A KL   M+  G   D+ +Y TLI+ +C
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +D++ A  L +E+   G+ P    YN++  G   ++ VE A+ L+ +M    +  D  
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 530

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY + IDGL KSG +L A ++   +       +  ++  LI+GL
Sbjct: 531 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGL 574



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 205/401 (51%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +FN L   L K    +   +L+  + + G+ P++ +++ +I   C+   ++    V  
Sbjct: 249 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L + FTPNAVTFT L+ G   +  I  A ++F + +     P   T   +I GLC+ G
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 368

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +    +LF +  +     G V  P  + YNTIIDG  KEG ++ A  ++ +M +  I P
Sbjct: 369 RSFEGRDLFNKFVSQ----GFV--PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 422

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             VTYTS+I GFC  N+ + A +L  +M  +G++ D+  +  ++D  CK   M  A  LL
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 482

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             +   G++PN + YN++I G+   + ++ A  L+  M + G   D+ +Y +LI+   K+
Sbjct: 483 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 542

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +  A  +++EMLSKGI P    +  L  GL    Q E A K+ ++M   ++      Y
Sbjct: 543 GRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIY 602

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N  I G  K G + EA  L   + D     + ++Y+ L++G
Sbjct: 603 NTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 30/420 (7%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           CL  N  Y   LSL + + +AG  P   T + +I    K G V+    +   ++    + 
Sbjct: 86  CLKPNSGY--ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSM 143

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N    TSL+KG C +  +  A  L  +       P+  TY+ LI+G C+ G+   A   +
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 203

Query: 236 EEMA-----------NGNGEFGVVCK-----------------PNTVTYNTIIDGLCKEG 267
            EM            N   E  + C+                  N  T+NT++  LCKEG
Sbjct: 204 SEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEG 263

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  L+ ++  + I+P+VV+Y ++I G C  ++ N A +++ EM+D G  P+ VTF+
Sbjct: 264 KMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFT 323

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           ++MD   K G ++ A  +   M    + P   T   +I G C   +    R LF    S 
Sbjct: 324 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 383

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +   + YNT+I+ + K  ++  A ++Y EM   GI P+ VTY +L  G  + + ++ A
Sbjct: 384 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 443

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LKL ++M+R  +  D   Y   IDG CK   +  A EL   +R +    N   YN +I G
Sbjct: 444 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 503



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 7/385 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  ++D ++    SP  VS  NI+ G   K+ + +    ++K +   G  P+  T +I
Sbjct: 266 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKD-NINAACKVYKEMLDNGFTPNAVTFTI 324

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ + K G + + F +  R+  +   P   T   +IKGLC   R  E   LF K     
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG 384

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P    YNT+I+G  + G+  +A N++ EM     E G+   P+TVTY ++IDG CK  
Sbjct: 385 FVPTCMPYNTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGN 438

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A +L   MK + +  D+  Y ++I GFC   D   A  L  E+   G+ P+   ++
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++        +++A  L + M+  G+  +  TY +LIDG   + ++ +A  +   M S 
Sbjct: 499 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 558

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + D  ++  LIN  C     E A  +  +M  K + P+V+ YNTL  G F+   ++ A
Sbjct: 559 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 618

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDG 472
            +L DEM    +  D  TY+  ++G
Sbjct: 619 FRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 183/373 (49%), Gaps = 15/373 (4%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P I   +IL+    +         +  ++L    T +  T   +++    E  I+EA   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
           F + +    E D   Y+  ++ LC   ++  AL+L  EM       G +  P   T+ ++
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI--PPEGTFTSV 116

Query: 260 IDGLCKEGFVDKAKELFLKMKDENIN----PDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           I    KEG V +A    L++KD+ +N     ++   TS+++G+C   +   A  L  E+ 
Sbjct: 117 ITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS 172

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G+ P+ VT+SV++D  CKNG ++KA      M  +G+  + Y+ N++++GY       
Sbjct: 173 ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQ 232

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           +A  +F     +G + +V ++NTL++W CK   + EA +L+ E+++KGI P VV+YN + 
Sbjct: 233 NAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 291

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
           LG      +  A K++ EM  N    +  T+   +DG  K G +  A  +F  ++D+   
Sbjct: 292 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 351

Query: 496 LNIVSYNCLIDGL 508
               +   +I GL
Sbjct: 352 PTDTTLGIIIKGL 364


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 213/444 (47%), Gaps = 33/444 (7%)

Query: 97  MLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           M +M  S   P + ++N +     K   +   + L   +N  G+  D+ T+++LI+  C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCR 275

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
             R + G+++L  + +    PN VT+ +L+ G   E +++ A  L  +   F   P+  T
Sbjct: 276 SNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT 335

Query: 215 YNTLINGLCRTGHTIVALNLFEEM-ANG-----------------NGEFGV--------- 247
           +N LI+G    G+   AL +F  M A G                 N EF +         
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 248 ---VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
              VC    +TY  +IDGLCK GF+D+A  +  +M  + I+PD+VTY+++I GFC     
Sbjct: 396 RNGVC-VGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             AK +   +   G+ P+ + +S ++   C+ G + +  R+ E MI  G  P+ +T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVL 514

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +   C   K+  A +    M S+G + + VS++ LIN Y  + +  +A S++ EM   G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGH 574

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
            PT  TY +L  GL +   +  A K    ++    A DT   N  I  +CKSG + +A+ 
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVS 634

Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
           LF  +       +  +Y  LI GL
Sbjct: 635 LFGEMVQRSILPDSFTYTSLISGL 658



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            ++L IF  M  ++   P V + N + G + K+    +V S  K +    + PD+ T +I
Sbjct: 140 QDSLEIFRLM-GLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNI 198

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  C  G       ++ ++ +S + P  VT+ +++   C + R   A  L     +  
Sbjct: 199 LINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKG 258

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              DV TYN LI+ LCR+  +     L  +M         +  PN VTYNT+++G   EG
Sbjct: 259 VNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRK------RMIHPNEVTYNTLLNGFSNEG 312

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V  A++L  +M    ++P+ VT+ ++I G     ++ EA ++F  M  +G+    V++ 
Sbjct: 313 KVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYG 372

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V++D LCKN + D A      M   GV     TY  +IDG C    +D A  +   M  +
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKD 432

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D+V+Y+ LIN +C+   ++ A  +   +   G+ P  + Y+TL      +  ++  
Sbjct: 433 GIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKET 492

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++++ M       D +T+N  +  LCK+G V EA E  R +       N VS++CLI+G
Sbjct: 493 IRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLING 552



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 7/352 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+ S  F  L    R C   N   F  LI+    E  I ++  +F    ++   P V+T 
Sbjct: 103 GKSSFVFGALMATYRLC-NSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N ++  + ++   +   +  +EM         +C P+  T+N +I+ LC EG   K+  L
Sbjct: 162 NAILGSIVKSCEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFKKSSYL 215

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             KM+     P +VTY +V+  +C    +  A  L   M  +GV  DV T+++++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCR 275

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           + +  K   LL  M  R ++PN  TYNTL++G+    K+  AR+L   M + G   + V+
Sbjct: 276 SNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT 335

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +N LI+ +    + +EAL ++  M +KG+  T V+Y  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           RN V     TY   IDGLCK+GF+ EA+ +   +     + +IV+Y+ LI+G
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALING 447



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 204/450 (45%), Gaps = 33/450 (7%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ + D+M  +      V ++N+L   L ++        L + +    + P+  T++ L+
Sbjct: 247 AIELLDHM-NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLL 305

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N F   G+V     +L  +L    +PN VTF +LI G  +E    EA  +F         
Sbjct: 306 NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLI 365

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMA-NG--------NGEFGVVCK---------- 250
               +Y  L++GLC+     +A   +  M  NG         G    +CK          
Sbjct: 366 GTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVM 425

Query: 251 ----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                     P+ VTY+ +I+G C+ G +  AKE+  ++    ++P+ + Y+++I   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                E  R++  M+ +G  PD  TF+V++  LCK GK+ +A   +  M   G+ PN  +
Sbjct: 486 MGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVS 545

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           ++ LI+GY  + +   A  +F  M   G      +Y +L+   CK   +  A      + 
Sbjct: 546 FDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           +       V  NTL   + +   +++A+ LF EM +  +  D++TY + I GLC+ G  +
Sbjct: 606 NVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTV 665

Query: 481 EALELFRAIRDSKYEL--NIVSYNCLIDGL 508
            A+ LF    +++  L  N V Y C +DG+
Sbjct: 666 IAI-LFAKEAEARGNLVPNKVMYTCFVDGM 694



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 199/474 (41%), Gaps = 75/474 (15%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   SF+ L      +       S+F  +   G  P  +T+  L+   CK G +      
Sbjct: 541  PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L  +       + V   +LI  +C    + +A +LF +    +  PD FTY +LI+GLCR
Sbjct: 601  LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTY---------------------------- 256
             G T++A+ LF + A   G       PN V Y                            
Sbjct: 661  KGKTVIAI-LFAKEAEARGNL----VPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGL 715

Query: 257  -------NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
                   N +IDG  + G ++K  +L  +M ++N  P++ TY  ++ G+      + +  
Sbjct: 716  TRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFM 775

Query: 310  LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
            L+  M+  G+ PD +T   I+  +C++  ++   ++L+  I RGV  + +T+N LI   C
Sbjct: 776  LYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCC 835

Query: 370  LTDKIDHA-------RKLFVSMESNGC-------------------MHDVVS-------- 395
               +I+ A         L +S++ N C                   +H++          
Sbjct: 836  ANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESR 895

Query: 396  -YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
             Y  L+N  C+  D++ A  +  EM++  I P  V  + +   L +  + + A  L   M
Sbjct: 896  KYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSM 955

Query: 455  RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  +     ++   +   CK+G V EALEL   + +   +L++VSYN LI GL
Sbjct: 956  LKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 124/261 (47%)

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           +C  N   ++ +I    +EG +  + E+F  M     NP V T  +++     + +    
Sbjct: 118 LCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSV 177

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
                EM+ + + PDV TF+++++ LC  G   K+S L++ M   G  P   TYNT++  
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC   +   A +L   M   G   DV +YN LI+  C++    +   L  +M  + I P 
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            VTYNTL  G     +V  A +L +EM    ++ +  T+N  IDG    G   EAL++F 
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +         VSY  L+DGL
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGL 378



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 172/379 (45%), Gaps = 12/379 (3%)

Query: 131  KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
            ++++  GL  D+ T + +I+ + +MG++     +L  +      PN  T+  L+ G    
Sbjct: 708  QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKR 767

Query: 191  SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 250
              +  +  L+    +    PD  T  ++I G+C +    + L + +           +C+
Sbjct: 768  KHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILK---------AFICR 818

Query: 251  PNTV---TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
               V   T+N +I   C  G ++ A ++   M    I+ D  T  +++      + + E+
Sbjct: 819  GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQES 878

Query: 308  KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
            + +  EM  QG+ P+   +  +++ LC+ G +  A  + E MI   + P     + ++  
Sbjct: 879  RMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938

Query: 368  YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
                 K D A  L  SM     +  + S+ TL++ +CKN +V EAL L   M + G+K  
Sbjct: 939  LAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLD 998

Query: 428  VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            +V+YN L  GL     +  A +LF+EM+R+   A+  TY   + G+   G      ++  
Sbjct: 999  LVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIIL 1058

Query: 488  AIRDSKYELNIVSYNCLID 506
                ++  +  +S+N +I+
Sbjct: 1059 KDLLARGFITAMSFNHMIN 1077



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 6/297 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P ++++NIL    +K KH  T   L++ +  +G+ PD  T   +I   C+   +  G  +
Sbjct: 752  PNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKI 811

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L   +      +  TF  LI   CA   I  A  +           D  T + +++ L R
Sbjct: 812  LKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNR 871

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  +  +  EM+           P +  Y  +++GLC+ G +  A  +  +M    I
Sbjct: 872  NHRFQESRMVLHEMSKQG------ISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKI 925

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             P  V  ++++R        +EA  L   M+   + P + +F+ +M   CKNG + +A  
Sbjct: 926  CPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALE 985

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            L  +M   G+  +  +YN LI G C    +  A +LF  M+ +G + +V +Y  L+ 
Sbjct: 986  LRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVG 1042



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 2/127 (1%)

Query: 101  HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
            H   PP  + + +   LAK    D    L + +    L P I + + L++ FCK G V+ 
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTE 982

Query: 161  GFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
              + L  ++ +C    + V++  LI GLCA+  +  A  LF + +      +V TY  L+
Sbjct: 983  A-LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041

Query: 220  NGLCRTG 226
             G+   G
Sbjct: 1042 GGILSQG 1048



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)

Query: 87   PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
             +EA  +   ML+M   P  ++SF  L     KN +    L L   +++ GL  D+ +++
Sbjct: 945  ADEASLLLRSMLKMKLVPT-IASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYN 1003

Query: 147  ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +LI   C  G ++  F +   + R  F  N  T+ +L+ G+ ++        +  K  + 
Sbjct: 1004 VLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLA 1063

Query: 207  ACEPDVFTYNTLIN 220
                   ++N +IN
Sbjct: 1064 RGFITAMSFNHMIN 1077


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 219/453 (48%), Gaps = 21/453 (4%)

Query: 60  VKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAK 119
           + D ASL++++K  C   G G I      EA+ ++  +         V+  +IL GCL  
Sbjct: 153 IPDSASLEQYVKCLC---GVGFIE-----EAIEVYFQLKEAGIRISIVACNSILSGCLKA 204

Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSI--LINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
            K  + +   ++ +  AG   D  T ++  LI  FC  G+V+ G+ +L + L++   P  
Sbjct: 205 GK-TELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGN 263

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGLCRTGHTIVALNLF 235
            T+  LI G C        + +   H + A    P ++TY  +INGLC+    + A  +F
Sbjct: 264 PTYNKLIAGFCQAKNYASMSEVL--HTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVF 321

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
            ++ +          P+ V Y T+I GLC+ G   +A++L+ +M D+ + P+  TY +++
Sbjct: 322 NDLKDRG------YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTML 375

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G   + D+  A  L+ EM ++G     VT + I+ ELC  GK D+A  + + M   G+ 
Sbjct: 376 HGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQ 435

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            +  TYN+LI G+C   K+D    L   + +      V  Y  LI   CK+ D E A  L
Sbjct: 436 ADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRL 495

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             +M SKG+ P   TY+T+  G  +    E   +L++E         T T N  I  LC 
Sbjct: 496 LGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCS 555

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            G   EA E+F+ + ++  + + ++YN LI G 
Sbjct: 556 RGKSDEASEMFKKMSETGIKADAITYNSLIRGF 588



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 45/441 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     + K+Y ++  +   + +    P IYT+  +IN  CK       + V
Sbjct: 261 PGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRV 320

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +    + P+ V +T++I GLC      EA  L+ +      +P+ +TYNT+++G  +
Sbjct: 321 FNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLK 380

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A  L+ EM N    +G      TVT N II  LC  G  D+A E+F KM +  I
Sbjct: 381 SGDFERACELYNEMCNKG--YGTT----TVTCNKIISELCSRGKSDEAFEVFKKMSETGI 434

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D +TY S+IRGFC     +E   L  E++ Q  QP V  + +++ + CK+G  + A R
Sbjct: 435 QADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKR 494

Query: 345 LLELMIWRGVNPNTYTYNTLIDG-----------------------------------YC 369
           LL  M  +G++PN YTY+T++ G                                    C
Sbjct: 495 LLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELC 554

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K D A ++F  M   G   D ++YN+LI  +CK   V ++++L +E++++G++P+  
Sbjct: 555 SRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSAS 614

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +Y +L + L +    E A +L+ +M    +        + I GLCK G   E ++    +
Sbjct: 615 SYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGM 674

Query: 490 RDSKYELNIVSY----NCLID 506
            ++K +    ++     CLI 
Sbjct: 675 LENKIKPKKAAFEDLAECLIQ 695


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 205/392 (52%), Gaps = 9/392 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ +F++M R++   P + +  +L   LAK++  DTV  ++K++   G+  +I+ +++
Sbjct: 153 HEAIQVFEHM-RVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNV 211

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK G V     VL  +   C  P+  T+ +LI   C +    EA ++  +  +  
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+FTYN+LI G CR G    A+ LF ++ +          PN VTY ++IDG C+  
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDIKD--------VTPNHVTYTSLIDGYCRVN 323

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  L   M ++ + P V+TY S++R  C      +A  L  EM ++ ++PD VT +
Sbjct: 324 DLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCN 383

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  CK G M  A ++ + M+  G+  + +TY  LI G+C   +ID A++L   M   
Sbjct: 384 TLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDA 443

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G      +Y+ L++ YCK ++ E  + L  E++ +G+   V  Y  L     +I +++ A
Sbjct: 444 GFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCA 503

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
            ++   M+   +  D+  Y +   G  K G V
Sbjct: 504 QRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKV 535



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 160/313 (51%), Gaps = 8/313 (2%)

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
           EA  +F   RV    P +     L+N L +   T     ++++M     + GVV   N  
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMV----KLGVV--ANIH 207

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YN ++   CK G V+KA+++  +M+ + + PD+ TY ++I  +C      EA  +   M
Sbjct: 208 VYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRM 267

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
              G+ PD+ T++ ++   C+ G+M +A +L   +  + V PN  TY +LIDGYC  + +
Sbjct: 268 EMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDL 325

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A +L   M   G    V++YN+++   C+   + +A  L +EM  + I+P  VT NTL
Sbjct: 326 DEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTL 385

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
                +I  +  ALK+ D+M    +  D +TY   I G CK+  + +A EL   + D+ +
Sbjct: 386 INAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGF 445

Query: 495 ELNIVSYNCLIDG 507
             +  +Y+ L+D 
Sbjct: 446 SPSYCTYSWLVDS 458



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 152/341 (44%), Gaps = 60/341 (17%)

Query: 74  CKSSGQGDI----NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           CKS   GD+     +++  E  C+F          P + ++N L     K   +   LS+
Sbjct: 217 CKS---GDVEKAEKVLSEMELKCVF----------PDLFTYNTLISLYCKKGMHYEALSV 263

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG--- 186
             R+  AG+ PDI+T++ LI  FC+ GR+    V L R ++   TPN VT+TSLI G   
Sbjct: 264 QDRMEMAGISPDIFTYNSLIYGFCREGRMREA-VQLFRDIKD-VTPNHVTYTSLIDGYCR 321

Query: 187 --------------------------------LCAESRIMEAAALFTKHRVFACEPDVFT 214
                                           LC   R+ +A  L  +      EPD  T
Sbjct: 322 VNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVT 381

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
            NTLIN  C+ G    AL + ++M       G   K +  TY  +I G CK   +DKAKE
Sbjct: 382 CNTLINAYCKIGDMRSALKVKDKMV------GAGLKLDQFTYKALIHGFCKAKEIDKAKE 435

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L   M D   +P   TY+ ++  +C   +     +L  E++ +G+  DV  +  ++   C
Sbjct: 436 LLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFC 495

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           K  K+D A R+L LM  +G+  ++  Y +L  GY    K++
Sbjct: 496 KIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVN 536



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 209 EPDV----FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGL 263
           +PDV     ++  ++ G  +  H   A+ +FE M  NG        +P+      +++ L
Sbjct: 131 DPDVNSHVLSWLVIVYGNSKMTHE--AIQVFEHMRVNG-------FRPHLHACTVLLNSL 181

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
            K+   D   +++ KM    +  ++  Y  ++   C + D  +A+++  EM  + V PD+
Sbjct: 182 AKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDL 241

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T++ ++   CK G   +A  + + M   G++P+ +TYN+LI G+C   ++  A +LF  
Sbjct: 242 FTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRD 301

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ++     H  V+Y +LI+ YC+  D++EAL L   M  KG+ PTV+TYN++   L E  +
Sbjct: 302 IKDVTPNH--VTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGR 359

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A  L +EM    +  D  T N  I+  CK G +  AL++   +  +  +L+  +Y  
Sbjct: 360 LRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKA 419

Query: 504 LIDG 507
           LI G
Sbjct: 420 LIHG 423


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 198/404 (49%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N+   C  K  + D     F  L + GL PD  +++ +I   CK GR+     +
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++      P A  + ++I G  +  R  +A  L  + R   C P V ++N+++  L +
Sbjct: 307 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 366

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL+LFE M           +PN+ TYN IID LC  G V++A  +  +M+  ++
Sbjct: 367 KRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 419

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+++T   ++   C A    EA ++F     +G  PD VT+  ++D L K G++D+A R
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M+  G N N   Y +LI  + +  + +   K+F  +   GC  D+   NT ++   
Sbjct: 480 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 539

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  +VE+   ++ ++ S G  P V +Y+ L  GL +  Q      +F  M++   A D  
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 599

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  +DG CKSG V +A E+   +++   +  + +Y  ++DGL
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 216/457 (47%), Gaps = 44/457 (9%)

Query: 88  NEALCIFDYMLRMHPSP-PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
            EA  I D M   H S  P + + NI+   L K +  +    +F+  +  G  PD  T+ 
Sbjct: 405 EEAYRILDEM--EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR-------------- 192
            LI+   K G+V   + +  ++L +    N V +TSLI+      R              
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 193 ---------------------IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVA 231
                                + +   +F   R +   PDV +Y+ LI+GL + G     
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582

Query: 232 LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
            N+F  M      F +    +   YN ++DG CK G V KA E+  +MK++ + P V TY
Sbjct: 583 SNIFHAMKQQG--FAL----DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATY 636

Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
            +++ G    +  +EA  LF E   +G++ +VV +S ++D   K G++D+A  +LE M+ 
Sbjct: 637 GAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMK 696

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
           +G+ PN YT+N+L+D     ++I+ A   F SM+   C  +  +Y+ LIN  C+ +   +
Sbjct: 697 KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNK 756

Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
           A   + +M  +G+ P VVTY T+  GL ++  +  A  LF+  + N    D  ++N  I+
Sbjct: 757 AFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 816

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G+  +   +EA ++F   R     +NI S   L+D L
Sbjct: 817 GMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDAL 853



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  F  L   LA+       L+L   +  + L PDI  +++ I+CF K G V   +    
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ V++TS+I  LC   R+ EA  LF +       P  + YNT+I G    G
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L E +          C P+ V++N+I+  L K+  VD+A  LF  MK ++  P
Sbjct: 334 RFEDAYKLLERLRERG------CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 386

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +  TY  +I   C      EA R+  EM    + P+++T ++++D LCK  K+++A ++ 
Sbjct: 387 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 446

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E    RG NP+  TY +LIDG     ++D A +LF  M   G   + V Y +LI  +  +
Sbjct: 447 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 506

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              E+   ++ E++ +G KP +   NT    +F+  +VE+   +F+++R      D  +Y
Sbjct: 507 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 566

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  I GL K+G   E   +F A++   + L+  +YN ++DG
Sbjct: 567 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 607



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 191/391 (48%), Gaps = 11/391 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F+ ML    +  PV   +++       +  D    +FK L   G  PD+   + 
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG-HKIFKELIRRGCKPDLTLLNT 533

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF--TKHRV 205
            ++C  K G V  G ++   I    F P+  +++ LI GL    +  E + +F   K + 
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           FA   D   YN +++G C++G    A  + EEM           +P   TY  I+DGL K
Sbjct: 594 FAL--DARAYNAVVDGFCKSGKVHKAYEILEEMKEK------CVQPTVATYGAIVDGLAK 645

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
              +D+A  LF + K + I  +VV Y+S+I GF      +EA  +  EMM +G+ P+V T
Sbjct: 646 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 705

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ ++D L K  ++++A    + M      PNTYTY+ LI+G C   K + A   +  M+
Sbjct: 706 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 765

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G + +VV+Y T+I+   K  ++ +A SL+    + G  P   ++N L  G+   ++  
Sbjct: 766 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 825

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            A ++F+E R      +  +  + +D L KS
Sbjct: 826 EAYQVFEETRLRGCRINIKSCISLLDALNKS 856



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 154/326 (47%), Gaps = 7/326 (2%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           L   L    R+ +A       R     P    Y  LI  L        AL L  +M    
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
            E GV        + T++  L +EG V  A  L  ++K   + PD+V Y   I  F  A 
Sbjct: 210 YEVGVH------LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 263

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           + + A + F E+  QG++PD V+++ ++  LCK G++ +A  L   M      P  Y YN
Sbjct: 264 NVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 323

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           T+I GY    + + A KL   +   GC+  VVS+N+++    K + V+EALSL+ E++ K
Sbjct: 324 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKK 382

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
             +P   TYN +   L    +VE A ++ DEM    +  +  T N  +D LCK+  + EA
Sbjct: 383 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 442

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
            ++F +        + V+Y  LIDGL
Sbjct: 443 YKIFESASQRGCNPDCVTYCSLIDGL 468


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 214/405 (52%), Gaps = 10/405 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N     L K    +    ++K + S G   ++ T +++I    K GR+     V+ 
Sbjct: 128 VHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIY 187

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA---CEPDVFTYNTLINGLC 223
           R L++   PN VTF  +I G      +  A  L  K  V +    +PD  TYN+ +NG C
Sbjct: 188 RSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFC 247

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G+  VA    +EM       G   +PN  TY T++DG  + G ++ A  L  ++ ++ 
Sbjct: 248 KIGNLAVAEEFKKEM------LGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKG 301

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P+ V Y S+I       D   A  L  +M+D+ + PD  T+S++++ LC+NG +++A 
Sbjct: 302 LLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAF 361

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           + L++++   +  + +++N +I+  C ++ +  A++L  +M   G + DVV++ TLI+ +
Sbjct: 362 KFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRH 421

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK+  VE A+ +Y +M+  G KP ++ YN++  G  +    + A+ L D +RR  +  D 
Sbjct: 422 CKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DV 480

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            TYN  I G C  G + +A  LF  +R+S    + V+YN LI+ L
Sbjct: 481 VTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSL 525



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 199/417 (47%), Gaps = 45/417 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V++FN++   L K       +S+  R    G++P++ T +++I+   KMG +     ++ 
Sbjct: 163 VNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVR 222

Query: 167 R--ILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  ++  C   P++VT+ S + G C    +  A     +      EP+V TY TL++G  
Sbjct: 223 KMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYT 282

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G    A  L +E+     E G++  PN+V YN+II  L  EG ++ A  L   M D+ 
Sbjct: 283 RVGSLENAFRLCDELV----EKGLL--PNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKR 336

Query: 284 INPDVVTYTSVIRGFCYANDWNEA-----------------------------------K 308
           I PD  TY+ VI G C     NEA                                   K
Sbjct: 337 IYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAK 396

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L   M  +G+ PDVVTF  ++D  CK+GK++ A ++ E MI  G  PN   YN++I+G+
Sbjct: 397 QLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGF 456

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
                 D A  L  ++   G + DVV+YNTLI+ YC    +++A +L+SEM + GI  + 
Sbjct: 457 AKEGSFDPAILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASH 515

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           VTYNTL   L +   V +A +L   M    +  D  TY   I    K     E +EL
Sbjct: 516 VTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 38/339 (11%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P++ T++ L++ + ++G + + F +   ++     PN+V + S+I  L  E   ME A+L
Sbjct: 269 PNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGD-MEGASL 327

Query: 200 F----TKHRVFACEPDVFTYNTLINGLCRTGH---------TIVALNLFEEMANGNGEFG 246
                   R++   PD FTY+ +I GLCR G+          I+ ++L  +  + N    
Sbjct: 328 LLSDMIDKRIY---PDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVIN 384

Query: 247 VVCK--------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +C+                    P+ VT+ T+ID  CK+G V+ A +++ KM      P
Sbjct: 385 YLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKP 444

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +++ Y SVI GF     ++ A  L   +   G+  DVVT++ ++   C  GK+D+A  L 
Sbjct: 445 NLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALF 503

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M   G+  +  TYNTLI+  C    +  A++L   M   G + D V+Y  LI  + K 
Sbjct: 504 SEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKK 563

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
              EE + L+  M+ KG+ P   TY T+ + L +   VE
Sbjct: 564 CSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 131/261 (50%), Gaps = 7/261 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +++I+   L +N + +      + +    L  D ++H+++IN  C+   ++    +
Sbjct: 339 PDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQL 398

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+ VTF +LI   C + ++  A  ++ K      +P++  YN++ING  +
Sbjct: 399 LANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAK 458

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ L + +    G F VV      TYNT+I G C  G +D+A  LF +M++  I
Sbjct: 459 EGSFDPAILLIDTLRR-MGLFDVV------TYNTLIHGYCNCGKIDQAFALFSEMRNSGI 511

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
               VTY ++I   C A    +AK L   M+ +G+ PD VT+++++    K    ++   
Sbjct: 512 LASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIE 571

Query: 345 LLELMIWRGVNPNTYTYNTLI 365
           L + M+ +GV P+  TY T++
Sbjct: 572 LHDYMVLKGVVPDRQTYQTMV 592


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 220/429 (51%), Gaps = 8/429 (1%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +G +   +P EA  +FD  +    +   V ++N L   L K        S+++++   G+
Sbjct: 407 RGYLKARSPEEASKLFDEAVACGIAN--VFTYNSLLSWLCKEGKMSEACSIWEKMVRKGV 464

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P + +++ +I   C+ G +     V   +L     PN +T++ L+ G   +     A  
Sbjct: 465 RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFG 524

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ + R     P  FT N +INGLC+ G T  + +  +++     + G +  P  +TYN 
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLV----QEGFI--PTCMTYNC 578

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           IIDG  KEG V+ A  ++ +M    ++P+V TYT++I GFC +N+ + A ++  EM ++G
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           ++ DV  +  ++D  C+ G M  AS+LL  +   G++PN   Y+++I G+     ++ A 
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            L   M + G   D+  Y TLI+   K   +  A  LY+EML+KGI P ++TY+ L  GL
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
               Q+E A K+ ++M R  +    + YN  I G  K G + EA  L   + D     + 
Sbjct: 759 CNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818

Query: 499 VSYNCLIDG 507
            +Y+ L++G
Sbjct: 819 TTYDILVNG 827



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 217/440 (49%), Gaps = 16/440 (3%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
            +K  CK   QGD++      AL +FD M      P  V+   I+  C  KN + D    
Sbjct: 335 LMKGYCK---QGDLD-----SALELFDKMNENGICPNNVTYAVIIEWC-CKNGNMDKAYE 385

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           ++ ++ +  + P ++  + LI  + K         +    + +C   N  T+ SL+  LC
Sbjct: 386 IYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV-ACGIANVFTYNSLLSWLC 444

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            E ++ EA +++ K       P V +YN +I G C+ G    A  +F EM     E G+ 
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML----EKGL- 499

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            KPN +TY+ ++DG  K+G  + A  L+ +M+ ENI P   T   +I G C A   +E++
Sbjct: 500 -KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQ 558

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
               +++ +G  P  +T++ I+D   K G ++ A  +   M   GV+PN +TY  LI+G+
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C ++ +D A K+   M++ G   DV  Y  LI+ +C+  D+  A  L SE+   G+ P  
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNK 678

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           V Y+++  G  ++  +E AL L   M    +  D   Y   I GL K G +L A EL+  
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +       ++++Y+ LI GL
Sbjct: 739 MLAKGIMPDLITYSVLIHGL 758



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 198/393 (50%), Gaps = 10/393 (2%)

Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
           C+ + K  + V  +   + S G   ++   + L+  +CK G +     +  ++  +   P
Sbjct: 304 CMKQGKMLEAV-KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICP 362

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N VT+  +I+  C    + +A  ++ + +     P VF  N+LI G  +      A  LF
Sbjct: 363 NNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF 422

Query: 236 EEMANGNGEFGVVCK-PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           +E         V C   N  TYN+++  LCKEG + +A  ++ KM  + + P VV+Y ++
Sbjct: 423 DE--------AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G C   D + A  +F+EM+++G++P+++T+SV+MD   K G  + A  L + M    +
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            P+ +T N +I+G C   +   ++     +   G +   ++YN +I+ + K   V  AL+
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +Y+EM   G+ P V TY  L  G  + + ++ ALK+ DEM+   +  D   Y   IDG C
Sbjct: 595 VYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + G ++ A +L   +++     N V Y+ +I G
Sbjct: 655 RKGDMVNASQLLSELQEVGLSPNKVVYSSMISG 687



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 191/390 (48%), Gaps = 7/390 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  I++ M+R    P  VS  N++ G   +    D+   +F  +   GL P++ T+S+
Sbjct: 450 SEACSIWEKMVRKGVRPSVVSYNNMILG-HCQQGDMDSANGVFVEMLEKGLKPNLITYSV 508

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ + K G   + F +  R+      P+  T   +I GLC   R  E+     K     
Sbjct: 509 LMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEG 568

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P   TYN +I+G  + G    AL ++ EM     + GV   PN  TY  +I+G CK  
Sbjct: 569 FIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC----KIGV--SPNVFTYTNLINGFCKSN 622

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A ++  +MK++ I  DV  Y ++I GFC   D   A +L  E+ + G+ P+ V +S
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYS 682

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++    K   M+ A  L + MI  G+  +   Y TLI G     K+  A +L+  M + 
Sbjct: 683 SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK 742

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G M D+++Y+ LI+  C    +E A  +  +M  K + PTV  YNTL  G F+   ++ A
Sbjct: 743 GIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEA 802

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
            +L +EM    +  D  TY+  ++G  K G
Sbjct: 803 FRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 163 VVLGRILRSC----FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           VV+ R++ S     F  ++  F  L+       RI +A   F         P +   N  
Sbjct: 136 VVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIF 195

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++ L +      A +++ +MA+     GV  K +  T + +I    +EG +++A+  F +
Sbjct: 196 LSELVKNNMIREARDVYNKMASK----GV--KGDCATISVMIRASMREGKLEEAEGWFRE 249

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
            K++ +  D   Y+ VI   C   D   A  L  EM D+G  P  V F+ ++    K GK
Sbjct: 250 AKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGK 309

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           M +A ++   M+  G   N     TL+ GYC    +D A +LF  M  NG   + V+Y  
Sbjct: 310 MLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAV 369

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +I W CKN ++++A  +Y++M +K I PTV   N+L  G  +    E A KLFDE     
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG 429

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + A+ +TYN+ +  LCK G + EA  ++  +       ++VSYN +I G
Sbjct: 430 I-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILG 477



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 131/254 (51%), Gaps = 11/254 (4%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N AL ++  M ++  SP   +  N++ G   K+ + D  L +   + + G+  D+  +  
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLING-FCKSNNMDLALKVMDEMKNKGIELDVTVYCA 648

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FC+ G + +   +L  +     +PN V ++S+I G   + + MEAA    K  +  
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGF-RKLQNMEAALHLHKRMINE 707

Query: 208 CEP-DVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCK 265
             P D+  Y TLI+GL + G  + A  L+ EM A G         P+ +TY+ +I GLC 
Sbjct: 708 GIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG-------IMPDLITYSVLIHGLCN 760

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G ++ A+++   M  + + P V  Y ++I G     +  EA RL  EM+D+G+ PD  T
Sbjct: 761 KGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTT 820

Query: 326 FSVIMDELCKNGKM 339
           + ++++   K+G +
Sbjct: 821 YDILVNGKVKDGNL 834



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 56/117 (47%)

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D   +N L+N Y K K + +A+  ++ ++ K I P +   N     L + + +  A  ++
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++M    V  D  T +  I    + G + EA   FR  ++   EL+  +Y+ +I+ +
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAV 269


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 202/390 (51%), Gaps = 20/390 (5%)

Query: 121 KHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
           + +D  L LFK +  AGLF P+ +T+++LI  FCK G++     V   +  S   PNA T
Sbjct: 4   RKHDQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
             +L+ GLC   ++  A  LF + +     P   ++N L+ G    G    A+  F+EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
               E      P+  +Y+ ++  L   G + +A  LF  M     +PD++TY  ++ G+C
Sbjct: 120 ASGVE------PDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYC 170

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
                 EA+ L  E++  G +P+V T+S+I++  CK  K+++A  +   MI     PN  
Sbjct: 171 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 230

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK-DVEEALSLYSE 418
           T+NTLI G+C    ++ A KLF  ME  GC   +V+YNTLI+  CK +  V  A+ L+++
Sbjct: 231 TFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNK 290

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           +   G+ PT+VTYN+L  G  E  +    L+L   M       D  TYN  I GLC +  
Sbjct: 291 LEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 348

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V +A  LF  +  +    N+ ++N LI GL
Sbjct: 349 VEDAQRLFNGMACAP---NVTTFNFLIRGL 375



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 209/437 (47%), Gaps = 51/437 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
           P   ++N+L     K       +S+F  + S+GL P+  T + L+   C++G++S     
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 160 --------------------HGFVVLGRILR-------SCFTPNAVTFTSLIKGLCAESR 192
                                GF + GR +        S   P+  ++  L+  L    R
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA ALF+      C PD+ TYN L++G C+ G T  A +L +E+     E      PN
Sbjct: 143 MAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PN 193

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
             TY+ II+  CK   V++A E+F+KM + N  P+ VT+ ++I GFC A    +A +LF 
Sbjct: 194 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 253

Query: 313 EMMDQGVQPDVVTFSVIMDELCKN-GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
           EM   G +  +VT++ ++D LCK  G +  A  L   +   G+ P   TYN+LI G+  +
Sbjct: 254 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--S 311

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           ++ +   +L   M + GC  DV++YN LI+  C    VE+A  L++ M      P V T+
Sbjct: 312 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTF 368

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           N L  GL    +VE A  + D M     A D  T+N  I   CK+G + +A E+ + +  
Sbjct: 369 NFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLK 424

Query: 492 SKYELNIVSYNCLIDGL 508
             +  N  +   L  G+
Sbjct: 425 HGFYPNTYTTYALAHGI 441



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 188/401 (46%), Gaps = 43/401 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  S+ N L   L +     + L LF+ + +    P   +H+IL+  F   GR    F  
Sbjct: 58  PNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFF-- 115

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +  S   P+  ++  L+  L    R+ EA ALF+      C PD+ TYN L++G C+
Sbjct: 116 -KEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCK 171

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T  A +L +E+     E      PN  TY+ II+  CK   V++A E+F+KM + N 
Sbjct: 172 IGQTYEAQSLMKEILKAGYE------PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC 225

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN-GKMDKAS 343
            P+ VT+ ++I GFC A    +A +LF EM   G +  +VT++ ++D LCK  G +  A 
Sbjct: 226 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV 285

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L   +   G+ P   TYN+LI G+  +++ +   +L   M + GC  DV++YN LI+  
Sbjct: 286 DLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGL 343

Query: 404 CKNKDVEEALSLYSEM----------------------------LSKGIKPTVVTYNTLF 435
           C    VE+A  L++ M                            L +   P + T+NT+ 
Sbjct: 344 CSANRVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTII 403

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
           L   +   +  A ++  +M ++    +TYT      G+  S
Sbjct: 404 LAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSS 444



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 6/206 (2%)

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
           A   ++A RLF E++     P+  T++V++   CK G+M +A  +   M   G+ PN  T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
            NTL+ G C   ++  A KLF  M++   +    S+N L+  +        A+  + EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM---AGRAIEFFKEMK 119

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           + G++P + +Y+ L   L +  ++  A  LF  M     + D  TYN  +DG CK G   
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176

Query: 481 EALELFRAIRDSKYELNIVSYNCLID 506
           EA  L + I  + YE N+ +Y+ +I+
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIIN 202


>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 490

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 213/432 (49%), Gaps = 17/432 (3%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT-------VLSLFKRLNSAG-- 137
           P  A  +FD +LR  P P        LF  LA+ +            + LF R+  A   
Sbjct: 34  PELAHQLFDELLR-QPVPVSARPLGGLFSALARAQPSTACADGPALAIDLFNRMTRARRR 92

Query: 138 --LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
             + PD YT++ILI+C  +  R   G    GR+L++  TP+ +T++SL++  C   R  E
Sbjct: 93  RVIAPDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEE 152

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L   HRV    PD  +Y+ ++   C  G +  AL+L   MA    E      P+ V+
Sbjct: 153 ALDLLL-HRVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEH----SPSVVS 207

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I G  KEG + KA  LF  M  +   PDVVTY SVI   C A   ++A+ +   M+
Sbjct: 208 YNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMV 267

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              VQPD VT++ ++      G++ +  RLL++M  +GV P+  T ++++D  C   KI 
Sbjct: 268 HNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIK 327

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A ++F S   NG   D+V Y+ +++ Y     + + + L   M   G+ P +  +N L 
Sbjct: 328 EAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILI 387

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
               +   ++ A+  F++M +  V  + +TY   I   CK G + +A+E F  + D    
Sbjct: 388 NAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVP 447

Query: 496 LNIVSYNCLIDG 507
           L+   Y C+++G
Sbjct: 448 LDTEVYMCMVEG 459



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 159/353 (45%), Gaps = 46/353 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR------- 157
           P V +++ L  C    K  +  L L      +G  PD  ++S+++  FC  GR       
Sbjct: 132 PDVITYSSLLQCFCDMKRTEEALDLLLH-RVSGDLPDAISYSVILKSFCDDGRSQCALDL 190

Query: 158 --------------------VSHGFVVLGRILRSC----------FTPNAVTFTSLIKGL 187
                               V HGF   G I ++C          + P+ VT+ S+I  L
Sbjct: 191 LRMMAEKGAEHSPSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINAL 250

Query: 188 CAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           C ++R M+ A +  +  V  + +PD  TYN+LI+G    G       L + M +     G
Sbjct: 251 C-KARAMDKAEVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQ----G 305

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
           V+  P+ VT ++++D LCK G + +A+E+F         PD+V Y+ ++ G+       +
Sbjct: 306 VM--PSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVK 363

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
              L   M   GV PD+  F+++++   K G MD A    E M+ +GV PN +TY T+I 
Sbjct: 364 MIDLCEVMARDGVVPDLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVIS 423

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            +C   ++D A + F  M   G   D   Y  ++  Y  + D  +A    ++M
Sbjct: 424 AFCKMGRMDDAMEKFSEMIDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKM 476



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD  TY  +I     A   +     F  ++  G+ PDV+T+S ++   C    M +  
Sbjct: 95  IAPDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCD---MKRTE 151

Query: 344 RLLELMIWR--GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD--VVSYNTL 399
             L+L++ R  G  P+  +Y+ ++  +C   +   A  L   M   G  H   VVSYN +
Sbjct: 152 EALDLLLHRVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLV 211

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ + K  ++ +A  L+  M+ +G  P VVTYN++   L +   +++A  +   M  N V
Sbjct: 212 IHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSV 271

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D  TYN+ I G    G + E   L + +R      ++V+ + ++D L
Sbjct: 272 QPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYL 320



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 97/280 (34%), Gaps = 99/280 (35%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+N++     K         LF  +   G  PD+ T++ +IN  CK   +    VV
Sbjct: 203 PSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVV 262

Query: 165 LGRILRSCFTPNAVTFTSLIKG-----------------------------------LCA 189
           L  ++ +   P+AVT+ SLI G                                   LC 
Sbjct: 263 LRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCK 322

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA---------- 239
             +I EA  +F    V   +PD+  Y+ +++G    G  +  ++L E MA          
Sbjct: 323 HGKIKEAEEMFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPC 382

Query: 240 -----NGNGEFGVV--------------CKPNTVTYNTIIDGLCKEGFVD---------- 270
                N   ++G++               KPN  TY T+I   CK G +D          
Sbjct: 383 FNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMI 442

Query: 271 -------------------------KAKELFLKMKDENIN 285
                                    KA+E   KMK+ +I+
Sbjct: 443 DMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKMKNMDIH 482


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 210/403 (52%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N++   + KN     V S FK++ ++ + P++ + +ILI+  C  G++     +
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNI 197

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R+ + P  V++ +L+   C + R   A  L         + DV TYN  I+ LCR
Sbjct: 198 LTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCR 257

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +     + ++M N       +  PN V+YNT+I+G  KEG +  A  +F +M + N+
Sbjct: 258 NSRSAQGYLVLKKMRNK------MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+++TY  +I G+C   ++ EA R+   M    V+P+ VT   +++ L K+ K D A  
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE       + N  ++  +IDG C    +D A +L + M  +G   D+++++ LIN +C
Sbjct: 372 ILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFC 431

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  ++ +A  + S++  +G  P  V ++TL     ++  V  A+K +  M  N   AD +
Sbjct: 432 KVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNF 491

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T N+ +  LC++G ++EA E    I       N V+++C+I+G
Sbjct: 492 TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 214/441 (48%), Gaps = 29/441 (6%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+  +   P + S+N L     K   +   L L   +   G+  D+ T+++ I+  C+  
Sbjct: 200 MMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNS 259

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           R + G++VL ++     TPN V++ +LI G   E +I  A  +F +       P++ TYN
Sbjct: 260 RSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYN 319

Query: 217 TLINGLCRTGHTIVALNLFEEMA---------------NG---NGEFGVV---------- 248
            LING C  G+   AL + + M                NG   + +F V           
Sbjct: 320 ILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCIN 379

Query: 249 -CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
               N +++  +IDGLC+ G +D+A +L ++M  + ++PD++T++ +I GFC   + N+A
Sbjct: 380 RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKA 439

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           K +  ++  +G  P+ V FS ++   CK G + +A +    M   G N + +T N+L+  
Sbjct: 440 KEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVAS 499

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   K+  A +    +   G + + V+++ +IN Y    D   A S++  M+S G  P+
Sbjct: 500 LCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPS 559

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             TY +L   L +      A KL  ++    +A DT +YN  I  + KSG +LEA+ LF 
Sbjct: 560 PFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE 619

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +  +    +  +Y C++ GL
Sbjct: 620 EMIQNNILPDSYTYTCILSGL 640



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 212/457 (46%), Gaps = 34/457 (7%)

Query: 62  DRASLKKFLKERCKSS--GQGDI-------NLITPNEALCIFDYMLRMHPSPPPVSSFNI 112
           D  +   F+   C++S   QG +        +ITPNE                   S+N 
Sbjct: 244 DVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV------------------SYNT 285

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L     K         +F  +    L P++ T++ILIN +C  G       VL  +  + 
Sbjct: 286 LINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEAND 345

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             PN VT  +L+ GL   ++   A  +  ++ +     +  ++  +I+GLCR G    A 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM       GV   P+ +T++ +I+G CK G ++KAKE+  K+  E   P+ V ++
Sbjct: 406 QLLIEMCKD----GV--HPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFS 459

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I   C   +  EA + +  M   G   D  T + ++  LC+NGK+ +A   L  +   
Sbjct: 460 TLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI 519

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN+ T++ +I+GY        A  +F  M S G      +Y +L+   CK ++  EA
Sbjct: 520 GLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L  ++    +    ++YNTL + + +   +  A++LF+EM +N++  D+YTY   + G
Sbjct: 580 RKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSG 639

Query: 473 LCKSG-FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L + G  V   + L R ++     LN + Y C IDGL
Sbjct: 640 LIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGL 676



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 177/451 (39%), Gaps = 102/451 (22%)

Query: 99   RMHPSPPPVS--SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
            ++H  P  V   S+N L   ++K+ +    + LF+ +    + PD YT++ +++   + G
Sbjct: 585  KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREG 644

Query: 157  RVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            R+   F+ LGR++ +   T N++ +T  I GL    +   A  LF +        D+   
Sbjct: 645  RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIAL 704

Query: 216  NTLINGLCRTGHTIVALNLFEEMANGN-----------------GEFGVVCK-------- 250
            N++ +G  R G    A +L  +  N N                 G+  + C         
Sbjct: 705  NSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR 764

Query: 251  ----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                PN +TY+++I GLC  G ++   ++      E+   D +T+  +IR  C  ND ++
Sbjct: 765  SGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDK 824

Query: 307  --------------------------------AKRLFI---EMMDQGVQPDVVTFSVIMD 331
                                            ++  F+   EM+ +G  P    +  +M 
Sbjct: 825  VIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMK 884

Query: 332  ELCKNGKMDKASRLLELMIWRGVN-----------------------------------P 356
             +C+ G +  A +L + M+  G++                                   P
Sbjct: 885  RMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIP 944

Query: 357  NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
             T T+ TL+  +C  D    A  L + ME      D+V+YN LI+  C N DV  AL  Y
Sbjct: 945  TTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFY 1004

Query: 417  SEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             E+  KG+ P + TY  L   +   H V R 
Sbjct: 1005 EEIKQKGLLPNMTTYRVLVSAISTKHYVSRG 1035



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 6/301 (1%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C  +   ++ LI    R G    A+N F  M           KP+  T N I+  + K  
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG------FKPSVYTCNMIMASMVKNC 154

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
                   F +M    + P+V ++  +I   C      +A  +   M   G  P +V+++
Sbjct: 155 RAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK G+   A  L+  M  +G+  +  TYN  ID  C   +      +   M + 
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + VSYNTLIN + K   +  A  +++EM+   + P ++TYN L  G       E A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L++ D M  N V  +  T    ++GL KS     A  +      ++  LN +S+  +IDG
Sbjct: 335 LRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDG 394

Query: 508 L 508
           L
Sbjct: 395 L 395



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/314 (20%), Positives = 117/314 (37%), Gaps = 64/314 (20%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +++FNIL    ++ +   +   L+  +  +G FP+  T+  LI   C  G +  G  +
Sbjct: 734  PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD------------- 211
            L   +    T + +TF  LI+  C  + + +   L     VF    D             
Sbjct: 794  LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 212  --------VF--------------TYNTLINGLCRTGHTIVALNLFEEMA------NGNG 243
                    VF               Y T++  +CR G    A  L ++M       +   
Sbjct: 854  RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 244  EFGVV-----CK------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            E  +V     C                   P T T+ T++   CK+    +A  L + M+
Sbjct: 914  ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973

Query: 281  DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
               +  D+V Y  +I   C   D   A   + E+  +G+ P++ T+ V++  +     + 
Sbjct: 974  HYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVS 1033

Query: 341  KASRLLELMIWRGV 354
            +   +L+ +  RG+
Sbjct: 1034 RGEIVLKDLNDRGL 1047


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 203/423 (47%), Gaps = 9/423 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHS 146
           ++A+ IF Y ++     P   ++N +   L     Y  V  L+  +++ G  FPD  T+S
Sbjct: 176 SKAIAIF-YQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYS 234

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI+ FCK+GR      +L  +  +   P    +T LI        +  A +LF + R  
Sbjct: 235 ALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQ 294

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C PDVFTY  LI GL + G    A + F EM          C+P+TV  N +I+ L K 
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREG------CRPDTVVMNNMINFLGKA 348

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRG-FCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           G +D A +LF +M      P VVTY ++I+  F   +  +E    F  M + G+ P   T
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +S+++D  CK  +M+KA  LLE M  +G  P    Y +LID      + D A +LF  ++
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
            N        Y  +I    K   +++A++++ EM   G  P V  YN L  GL     ++
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL     M+ +    D  +YN  ++GL K+G    A+E+   ++ S    ++VSYN ++
Sbjct: 529 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 588

Query: 506 DGL 508
             L
Sbjct: 589 GAL 591



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 172/356 (48%), Gaps = 11/356 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAA 197
           D  T+  LI C   + +    + ++  ++R+     TP  ++   +++ L     + +A 
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELS--EVVRMLGNAKMVSKAI 179

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
           A+F + +   C+P    YN++I  L   G       L+ EM+         C P+T+TY+
Sbjct: 180 AIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGH-----CFPDTMTYS 234

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I   CK G  D A +L  +MK+  + P    YT +I  F   +D + A  LF EM  Q
Sbjct: 235 ALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQ 294

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
             +PDV T++ ++  L K G++D+A      M   G  P+T   N +I+      ++D A
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDA 354

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            KLF  M +  C+  VV+YNT+I    ++K    E  S +  M   GI P+  TY+ L  
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 414

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           G  + +++E+A+ L +EM           Y + ID L K+     A ELF+ ++++
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 8/234 (3%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK---N 336
           K  N   D  TY ++IR       + E  ++  EM+     P  V     + E+ +   N
Sbjct: 115 KRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRN---PICVVTPTELSEVVRMLGN 171

Query: 337 GKM-DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVV 394
            KM  KA  +   +  R   P    YN++I       +     +L+  M + G C  D +
Sbjct: 172 AKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTM 231

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y+ LI+ +CK    + A  L +EM   G++PT   Y  L    F++  V  AL LF+EM
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           R  +   D +TY   I GL K+G + EA   F  ++      + V  N +I+ L
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFL 345



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 9/166 (5%)

Query: 70  LKERCKSSGQGDINLITP--------NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           LKE C SS      ++          ++A+ +FD M ++  +P  V ++N L   LA+  
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD-VYAYNALMSGLARTG 525

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             D  LS  +R+   G  PDI +++I++N   K G       +L  + +S   P+ V++ 
Sbjct: 526 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYN 585

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +++  L       EAA L  +      E D+ TY++++  + +  H
Sbjct: 586 TVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 80/494 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A C+F  M+      P +   N +   L K K  D   S+ +++  +G+ PD++T+S+
Sbjct: 207 DKAHCLFLEMME-QGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 265

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL-----IKGLCAES----------- 191
           +I+  CK   +     VL +++ +   PN++T+ SL     I G+  ES           
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 325

Query: 192 -------------------RIMEAAALFTKHRVFACEPDVFTYNT--------------- 217
                              R  EA  +F    +   +PD+ +Y+T               
Sbjct: 326 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 385

Query: 218 ----------------------LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
                                 LIN   R G    A+ +FE+M N     G++  P+TVT
Sbjct: 386 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVT 439

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           + T+I  LC+ G +D A   F  M D  + P    Y  +I+G C   +  +AK L  EMM
Sbjct: 440 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 499

Query: 316 DQGVQPDVVT-FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ + P  V  FS I++ LCK G++ +   ++++M+  G  PN  T+N+L++GYCL   +
Sbjct: 500 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 559

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  L  +M S G   +   Y TL++ YCKN  +++AL+++ +ML KG+KPT V Y+ +
Sbjct: 560 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 619

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A K+F EM  +      +TY   + GLC++    EA  L   +     
Sbjct: 620 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 679

Query: 495 ELNIVSYNCLIDGL 508
           + +I+++N +I  +
Sbjct: 680 KFDIITFNIVISAM 693



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 6/408 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA CIFD M+   P P  +S   +L G   A +     V ++F  + + G+ P+ +  +
Sbjct: 347 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 406

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILIN + + G +    ++   +      P+ VTF ++I  LC   R+ +A   F      
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P    Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCKE
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKE 521

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V + K++   M      P+VVT+ S++ G+C   +  EA  L   M   G++P+   +
Sbjct: 522 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 581

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++D  CKNG++D A  +   M+ +GV P +  Y+ ++ G     +   A+K+F  M  
Sbjct: 582 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 641

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G    + +Y  ++   C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + + 
Sbjct: 642 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 701

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           A +LFD +    +  +  TY+  I  L K     EA  LF ++  S +
Sbjct: 702 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 749



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 208/428 (48%), Gaps = 13/428 (3%)

Query: 86  TPNEALCIFDYMLRM---HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
            P  A+ +F  M R      SPP + ++NIL  C  +    D  L++  RL   GL PD 
Sbjct: 132 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD 191

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +++S LI  F K G V     +   ++     P  +   S+IK LC    + +A ++  K
Sbjct: 192 FSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 250

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  PD+FTY+ +I+GLC++     A  + E+M           +PN++TYN++I G
Sbjct: 251 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSITYNSLIHG 304

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
               G  +++  +F +M    + P V    S I         NEAK +F  M+ +G +PD
Sbjct: 305 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 364

Query: 323 VVTFSVIMD--ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           ++++S ++       +  +     +  LM+ +G+ PN + +N LI+ Y     +D A  +
Sbjct: 365 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 424

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M++ G + D V++ T+I+  C+   +++AL  ++ M+  G+ P+   Y  L  G   
Sbjct: 425 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 484

Query: 441 IHQVERALKLFDEMRRNHVAADTYTY-NNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
             ++ +A +L  EM    +      Y ++ I+ LCK G V E  ++   +  +    N+V
Sbjct: 485 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 544

Query: 500 SYNCLIDG 507
           ++N L++G
Sbjct: 545 TFNSLMEG 552


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 234/458 (51%), Gaps = 32/458 (6%)

Query: 69  FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
           FL  R    G+ D+       A+ I+ ++ R+  +P   + + I    L +  +++  + 
Sbjct: 197 FLMNRLIEHGKIDM-------AVAIYRHLKRLGLNPNDYT-YGIFIKALCRKGNFEEAVD 248

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP-NAVTFTSLIKGL 187
           +F+ +  AG+ P+  T S  I   C   R   G+  L R LR+   P +   +T++I+G 
Sbjct: 249 VFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEAL-RALRAANWPIDTFAYTAVIRGF 307

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C+E ++ EA  +F         PD + Y  LI+  C+ G+ + A+ L  +M +   +  +
Sbjct: 308 CSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNL 367

Query: 248 VCK----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           V +           + V YN ++D LCK G V++A EL  +MK   ++ DVV YT++I G
Sbjct: 368 VDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAG 427

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C      +AK +F EM ++G++PD+VT+++++    +NG   +A  LL+ +  +G+ PN
Sbjct: 428 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 487

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
           + T+N +I+G C+  K+  A     ++E + C+ +   Y+ +++ YCK     +A  L+S
Sbjct: 488 SATHNRIIEGLCMAGKVKEAEAFLNTLE-DKCLEN---YSAMVDGYCKANFTRKAYELFS 543

Query: 418 EMLSKGI--------KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            +  +GI        +P  + Y  L         ++RA  +FD +    +  D  TY   
Sbjct: 544 RLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMM 603

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           I+G C+   + EA ++F  +++   + ++++Y  ++DG
Sbjct: 604 INGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDG 641



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 178/316 (56%), Gaps = 18/316 (5%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           FK    +G+F D   ++I+++  CK+G+V     +L  +     + + V +T+LI G C 
Sbjct: 371 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 430

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           + ++++A  +F + +    EPD+ TYN L+ G  R G    AL L + +    G  G+  
Sbjct: 431 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI----GTQGL-- 484

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KPN+ T+N II+GLC  G V +A+     ++D+ +      Y++++ G+C AN   +A  
Sbjct: 485 KPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYE 540

Query: 310 LFIEMMDQG--------VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           LF  +  QG        V+P+ + +  ++   C++G M +A  + ++++ RG+ P+  TY
Sbjct: 541 LFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITY 600

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
             +I+GYC  + +  AR +F  M+  G   DV++Y  +++ + K  ++++A++LY EM++
Sbjct: 601 TMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIA 660

Query: 422 KGIKPTVVTYNTLFLG 437
           +G++P +VTY  L  G
Sbjct: 661 RGLQPDIVTYTALLPG 676



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 179/382 (46%), Gaps = 26/382 (6%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           I    +L+  + ++G        L +  R  F P+ ++   L+  L    +I  A A++ 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +     P+ +TY   I  LCR G+   A+++F EM     E GV   PN VT +T I+
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREME----EAGV--NPNAVTCSTYIE 270

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC     D   E    ++  N   D   YT+VIRGFC      EA+ +FI+M+++G+ P
Sbjct: 271 GLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAP 330

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN----------------TYTYNTLI 365
           D   +  ++   CK G + +A  L   M+  G+  N                   YN ++
Sbjct: 331 DGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVV 390

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           D  C   K++ A +L   M+      DVV Y TLI  YC    + +A +++ EM  +GI+
Sbjct: 391 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 450

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P +VTYN L  G       + AL+L D +    +  ++ T+N  I+GLC +G V EA   
Sbjct: 451 PDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 510

Query: 486 FRAIRDSKYELNIVSYNCLIDG 507
              + D   E    +Y+ ++DG
Sbjct: 511 LNTLEDKCLE----NYSAMVDG 528



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 179/393 (45%), Gaps = 26/393 (6%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            ++L     +   +D  +    +    G  P I + + L+N   + G++     +   + 
Sbjct: 160 LDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLK 219

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R    PN  T+   IK LC +    EA  +F +       P+  T +T I GLC    + 
Sbjct: 220 RLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSD 279

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           +       +   N         +T  Y  +I G C E  + +A+++F+ M +E I PD  
Sbjct: 280 LGYEALRALRAANWPI------DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGY 333

Query: 290 TYTSVIRGFCYANDWNEAKRL----------------FIEMMDQGVQPDVVTFSVIMDEL 333
            Y ++I  +C A +  +A  L                F E  D G+  D V +++++D L
Sbjct: 334 IYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDAL 393

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK GK+++A  LL  M  R ++ +   Y TLI GYCL  K+  A+ +F  M+  G   D+
Sbjct: 394 CKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDI 453

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+YN L+  + +N   +EAL L   + ++G+KP   T+N +  GL    +V+ A    + 
Sbjct: 454 VTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNT 513

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +    +      Y+  +DG CK+ F  +A ELF
Sbjct: 514 LEDKCLE----NYSAMVDGYCKANFTRKAYELF 542



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 6/244 (2%)

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
           ++F+ +   G+ PDI T++IL+  F + G       +L  I      PN+ T   +I+GL
Sbjct: 439 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN--GEF 245
           C   ++ EA A          E     Y+ +++G C+   T  A  LF  ++        
Sbjct: 499 CMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRML 554

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
            +  +PN + Y  +I   C++G + +A+ +F  + +  I PDV+TYT +I G+C  N   
Sbjct: 555 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 614

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA+ +F +M ++G++PDV+T++V++D   K   +  A  L + MI RG+ P+  TY  L+
Sbjct: 615 EARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674

Query: 366 DGYC 369
            G C
Sbjct: 675 PGKC 678



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 18/251 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NIL G  ++N      L L   + + GL P+  TH+ +I   C  G+V      
Sbjct: 451 PDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 510

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH------RVFA--CEPDVFTYN 216
           L  +   C       +++++ G C  +   +A  LF++       R+ A   EP+   Y 
Sbjct: 511 LNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYG 566

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            LI   CR G    A  +F+ +     E G+   P+ +TY  +I+G C+   + +A+++F
Sbjct: 567 KLIGAFCRDGDMKRAQLVFDMLV----ERGIT--PDVITYTMMINGYCRVNCLREARDIF 620

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
             MK+  I PDV+TYT V+ G    N+  +A  L+ EM+ +G+QPD+VT++ ++   C  
Sbjct: 621 NDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNF 680

Query: 337 GKMDKASRLLE 347
           G     ++ LE
Sbjct: 681 GSRHFDNQWLE 691



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 51/303 (16%)

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + ++    + G  D+A +   + K     P +++   ++         + A  ++  +  
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT---------------- 360
            G+ P+  T+ + +  LC+ G  ++A  +   M   GVNPN  T                
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 361 -------------------YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
                              Y  +I G+C   K+  A  +F+ M + G   D   Y  LI+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVT----------------YNTLFLGLFEIHQVE 445
            YCK  ++ +A++L+++M+S GIK  +V                 YN +   L ++ +VE
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A++L +EM+   ++ D   Y   I G C  G +++A  +F  +++   E +IV+YN L+
Sbjct: 401 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 460

Query: 506 DGL 508
            G 
Sbjct: 461 GGF 463



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 9/207 (4%)

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
           N+ N A   F ++ + G Q +V T++ ++  LC+     K   LL  ++  G   +    
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVL-- 130

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
                G+ +T   D  R+    +E       ++  + L+  Y +    +EA+    +   
Sbjct: 131 -----GFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKR 185

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
           +G  P +++ N L   L E  +++ A+ ++  ++R  +  + YTY  FI  LC+ G   E
Sbjct: 186 RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A+++FR + ++    N V+ +  I+GL
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGL 272


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 214/423 (50%), Gaps = 14/423 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + + M+      P   ++N +   ++K      +  L   +   GL P+  T++ L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +  +CK+G +   F ++  + ++   P+  T+  LI GLC    + E   L    +    
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-- 266
           +PDV TYNTLI+G    G ++ A  L E+M N     GV  K N VT+N  +  LCKE  
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMEND----GV--KANQVTHNISLKWLCKEEK 395

Query: 267 --GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
                 K KEL   +     +PD+VTY ++I+ +    D + A  +  EM  +G++ + +
Sbjct: 396 REAVTRKVKEL---VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T + I+D LCK  K+D+A  LL     RG   +  TY TLI G+   +K++ A +++  M
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +       V ++N+LI   C +   E A+  + E+   G+ P   T+N++ LG  +  +V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           E+A + ++E  ++    D YT N  ++GLCK G   +AL  F  + + + E++ V+YN +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTM 631

Query: 505 IDG 507
           I  
Sbjct: 632 ISA 634



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 212/418 (50%), Gaps = 9/418 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA-GLFPDIYTHSILINC 151
           +FD M+++  S   V +FN+L          +  L + +R+ S   + PD  T++ ++  
Sbjct: 191 VFDDMVKIGVSLN-VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
             K GR+S    +L  + ++   PN VT+ +L+ G C    + EA  +    +     PD
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           + TYN LINGLC  G     L L + M +      +  +P+ VTYNT+IDG  + G   +
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKS------LKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIM 330
           A++L  +M+++ +  + VT+   ++  C         R   E++D  G  PD+VT+  ++
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
               K G +  A  ++  M  +G+  NT T NT++D  C   K+D A  L  S    G +
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D V+Y TLI  + + + VE+AL ++ EM    I PTV T+N+L  GL    + E A++ 
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           FDE+  + +  D  T+N+ I G CK G V +A E +       ++ +  + N L++GL
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 193/437 (44%), Gaps = 68/437 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NIL   L         L L   + S  L PD+ T++ LI+   ++G       +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV--FACEPDVFTYNTLINGL 222
           + ++       N VT    +K LC E +  EA     K  V      PD+ TY+TLI   
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE---------------- 266
            + G    AL +  EM    G+ G+  K NT+T NTI+D LCKE                
Sbjct: 427 LKVGDLSGALEMMREM----GQKGI--KMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480

Query: 267 --------------GF-----VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
                         GF     V+KA E++ +MK   I P V T+ S+I G C+      A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
              F E+ + G+ PD  TF+ I+   CK G+++KA       I     P+ YT N L++G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C     + A   F ++     + D V+YNT+I+ +CK+K ++EA  L SEM  KG++P 
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659

Query: 428 VVTYNTLFLGLFE---IHQVERALKLFD----EMRRN----------------HVAADTY 464
             TYN+    L E   + + +  LK F      M+R+                 +  +  
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAI 719

Query: 465 TYNNFIDGLCKSGFVLE 481
            Y++ ID LC  G + E
Sbjct: 720 AYSDVIDELCSRGRLKE 736



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 11/301 (3%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK--EG 267
           P    ++  ++     G   VAL +F++M        +  KPN +T NT++ GL +    
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIR------LKLKPNLLTCNTLLIGLVRYPSS 182

Query: 268 F-VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
           F +  A+E+F  M    ++ +V T+  ++ G+C      +A  +   M+ +  V PD VT
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVT 242

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           ++ I+  + K G++     LL  M   G+ PN  TYN L+ GYC    +  A ++   M+
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
               + D+ +YN LIN  C    + E L L   M S  ++P VVTYNTL  G FE+    
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD-SKYELNIVSYNCL 504
            A KL ++M  + V A+  T+N  +  LCK           + + D   +  +IV+Y+ L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422

Query: 505 I 505
           I
Sbjct: 423 I 423



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 30/259 (11%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  L     + +  +  L ++  +    + P + T + LI   C  G+          +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
             S   P+  TF S+I G C E R+ +A   + +    + +PD +T N L+NGLC+ G T
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             ALN F  +           + +TVTYNT+I   CK+  + +A +L  +M+++ + PD 
Sbjct: 608 EKALNFFNTLIEER-------EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEM------MDQGVQ-----------------PDVVT 325
            TY S I         +E   L  +       M + +Q                  + + 
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIA 720

Query: 326 FSVIMDELCKNGKMDKASR 344
           +S ++DELC  G++ + SR
Sbjct: 721 YSDVIDELCSRGRLKEHSR 739



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 39/226 (17%)

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG---YCLTDKIDHA 377
           P    F + +      GK   A ++ + MI   + PN  T NTL+ G   Y  +  I  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK--------------- 422
           R++F  M   G   +V ++N L+N YC    +E+AL +   M+S+               
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 423 ---------------------GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
                                G+ P  VTYN L  G  ++  ++ A ++ + M++ +V  
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D  TYN  I+GLC +G + E LEL  A++  K + ++V+YN LIDG
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 214/434 (49%), Gaps = 43/434 (9%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+N L   L ++      L +++R+ S GL P + T+S L+    K        V+L  +
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 PN  TFT  I+ L    +I EA  +F +     C PD+ TY  LI+ LC  G  
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A  LF +M ANG+       KP+ V Y T++D     G +D  KE + +M+ +   PD
Sbjct: 314 ENAKELFVKMKANGH-------KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD 366

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           VVT+T ++   C A D++EA   F  M  QG+ P++ T++ ++  L + G+++ A +LL+
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426

Query: 348 LMIWRGVNPNTYTYNTLIDG---------------------------------YCLTD-- 372
            M   GV P  YTY T ID                                  Y L +  
Sbjct: 427 TMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           ++  A+ +F  +  NG   D V+YN ++  Y K   V+EA++L SEM+  G +P V+  N
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           +L   L++  +V+ A ++FD M+   ++    TYN  + GL K G V +A+ELF ++   
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606

Query: 493 KYELNIVSYNCLID 506
           K   N +S+N L+D
Sbjct: 607 KCSPNTISFNTLLD 620



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 206/437 (47%), Gaps = 41/437 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++  +F  L+       + ++  ++  AG   + Y+++ LI+   + G       V  
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           R++     P+  T+++L+  L  +        L  +       P+V+T+   I  L R G
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  +F  M +        C P+ VTY  +ID LC  G ++ AKELF+KMK     P
Sbjct: 277 KIDEAYEIFRRMDDEG------CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V Y +++  F    D +  K  + +M   G  PDVVTF++++D LCK    D+A    
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           ++M  +G+ PN +TYNTLI G     +I+ A KL  +MES G      +Y T I+++ K+
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYN----------------TLFLGLFE---------- 440
            +  +A+  + +M +KGI P +V  N                T+F GL E          
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTY 510

Query: 441 ---------IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
                    + QV+ A+ L  EM RN    D    N+ ID L K+G V EA ++F  ++D
Sbjct: 511 NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570

Query: 492 SKYELNIVSYNCLIDGL 508
            K    +V+YN L+ GL
Sbjct: 571 MKLSPTVVTYNTLLSGL 587



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           DT    + ++ + G  PD+ T +IL++  CK       F     + +    PN  T+ +L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I GL    RI +A  L         +P  +TY T I+   ++G T  A+  FE+M     
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK-- 466

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
             G+V  PN V  N  +  L + G + +AK +F  +++  + PD VTY  +++ +     
Sbjct: 467 --GIV--PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            +EA  L  EM+  G +PDV+  + ++D L K G++D+A ++ + M    ++P   TYNT
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           L+ G     ++  A +LF SM    C  + +S+NTL++ +CKN +VE AL ++S+M    
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            KP V+TYNT+  GL + ++V  A   F +++++ +  D  T    + GL K G + +A+
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 484 ELFR 487
            + R
Sbjct: 702 SIAR 705



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 214/456 (46%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL ++  M+      P + +++ L   L K +  + V+ L K +   GL P++YT +I
Sbjct: 209 GEALEVYRRMVS-EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I    + G++   + +  R+      P+ VT+T LI  LC   ++  A  LF K +   
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PD   Y TL++     G     L+ F+E  +     G +  P+ VT+  ++D LCK  
Sbjct: 328 HKPDQVIYITLLDKFNDFGD----LDTFKEFWSQMEADGYM--PDVVTFTILVDVLCKAR 381

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A   F  M+ + I P++ TY ++I G   A    +A +L   M   GVQP   T+ 
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYI 441

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPN------------------------------ 357
             +D   K+G+  KA    E M  +G+ PN                              
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 358 -----TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
                + TYN ++  Y    ++D A  L   M  NGC  DV+  N+LI+   K   V+EA
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             ++  M    + PTVVTYNTL  GL +  +V++A++LF+ M     + +T ++N  +D 
Sbjct: 562 WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDC 621

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            CK+  V  AL++F  +     + ++++YN +I GL
Sbjct: 622 FCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 194/425 (45%), Gaps = 41/425 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG--- 161
           P V +F I    L +    D    +F+R++  G  PD+ T+++LI+  C  G++ +    
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319

Query: 162 FVVL--------------------------------GRILRSCFTPNAVTFTSLIKGLCA 189
           FV +                                 ++    + P+ VTFT L+  LC 
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                EA A F   R     P++ TYNTLI GL R G    AL L + M +      V  
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES------VGV 433

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P   TY T ID   K G   KA E F KMK + I P++V   + +          EAK 
Sbjct: 434 QPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKT 493

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F  + + G+ PD VT++++M    K G++D+A  LL  MI  G  P+    N+LID   
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++D A ++F  M+       VV+YNTL++   K   V++A+ L+  M+ K   P  +
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTI 613

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           ++NTL     +  +VE ALK+F +M       D  TYN  I GL K   V  A   F  +
Sbjct: 614 SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673

Query: 490 RDSKY 494
           + S +
Sbjct: 674 KKSMH 678



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 167/326 (51%), Gaps = 7/326 (2%)

Query: 148  LINCFCKMGRVSHGFVVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            L+   CK  R  + + +  +  +    +P   ++  LI  L       +A  LF   +  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 207  ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
             C PD FT+N L+    ++G       L++EM +        CKP+ +TYN +I  L K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------CKPDAITYNIVISSLAKS 871

Query: 267  GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
              +DKA + F  +   +  P   TY  +I G        EA RLF EM D G +P+   F
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +++++   K G  + A +L + M+  G+ P+  +Y  L+D  CL  ++D A   F  ++S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             G   D ++YN +IN   K++ +EEAL+LY+EM ++GI P + TYN+L L L     VE+
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDG 472
            A ++++E++   +  D +TYN  I G
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 180/345 (52%), Gaps = 6/345 (1%)

Query: 90   ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
            A  IFD   +     P ++S+N L G L +  + +    LFK + + G  PD +T ++L+
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830

Query: 150  NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
                K G+++  F +   ++     P+A+T+  +I  L   + + +A   F         
Sbjct: 831  AVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFR 890

Query: 210  PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            P   TY  LI+GL + G    A+ LFEEM+    ++G  CKPN   +N +I+G  K G  
Sbjct: 891  PTPRTYGPLIDGLAKVGRLEEAMRLFEEMS----DYG--CKPNCAIFNILINGYGKIGDT 944

Query: 270  DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            + A +LF +M +E I PD+ +YT ++   C A   +EA   F E+   G+ PD + ++ I
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 330  MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
            ++ L K+ +M++A  L   M  RG+ P+ YTYN+L+    L   ++ A++++  ++  G 
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064

Query: 390  MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
              DV +YN LI  Y  +++ E A ++Y  M+  G  P + TY  L
Sbjct: 1065 EPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 208/447 (46%), Gaps = 44/447 (9%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR +   P   ++N++  C +K    D  ++L   +   G  PD+   + LI+   K GR
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   + +  R+     +P  VT+ +L+ GL  E R+ +A  LF       C P+  ++NT
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L++  C+     +AL +F +M   +      CKP+ +TYNT+I GL KE  V+ A   F 
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWFFH 671

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEA---------------KRLFIEMMDQG--VQ 320
           ++K ++++PD VT  +++ G        +A                R F E +  G  V+
Sbjct: 672 QLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLL-----------ELMIWR---------GVNPNTYT 360
            ++    +  +EL  NG   + S L+           EL  ++         G++P   +
Sbjct: 731 AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN LI         + A  LF  M++ GC  D  ++N L+  + K+  + E   LY EM+
Sbjct: 791 YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
           S+  KP  +TYN +   L + + +++AL  F ++  +       TY   IDGL K G + 
Sbjct: 851 SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           EA+ LF  + D   + N   +N LI+G
Sbjct: 911 EAMRLFEEMSDYGCKPNCAIFNILING 937



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 208/455 (45%), Gaps = 45/455 (9%)

Query: 90   ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
            AL +F  M  M   P  ++   +++G + +NK  +     F +L  + + PD  T   L+
Sbjct: 631  ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK-VNHAFWFFHQLKKS-MHPDHVTICTLL 688

Query: 150  NCFCKMGRVSHGFVV--------------------LGRILRSCFTPNAVTFTS------- 182
                K G++     +                    +G  L       A+ F         
Sbjct: 689  PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 183  ---------LIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVAL 232
                     L++ LC   R + A  +F K  +     P + +YN LI  L    +T  A 
Sbjct: 749  CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 233  NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            +LF++M N      V C P+  T+N ++    K G + +  EL+ +M      PD +TY 
Sbjct: 809  DLFKDMKN------VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYN 862

Query: 293  SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
             VI     +N+ ++A   F +++    +P   T+  ++D L K G++++A RL E M   
Sbjct: 863  IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922

Query: 353  GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
            G  PN   +N LI+GY      + A +LF  M + G   D+ SY  L++  C    V+EA
Sbjct: 923  GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982

Query: 413  LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            L  ++E+ S G+ P  + YN +  GL +  ++E AL L++EMR   +  D YTYN+ +  
Sbjct: 983  LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042

Query: 473  LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            L  +G V +A  ++  ++ +  E ++ +YN LI G
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 6/297 (2%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P   +FN+L     K+     +  L+K + S    PD  T++I+I+   K   +      
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               ++ S F P   T+  LI GL    R+ EA  LF +   + C+P+   +N LING  +
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G T  A  LF+ M N         +P+  +Y  ++D LC  G VD+A   F ++K   +
Sbjct: 941  IGDTETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            +PD + Y  +I G   +    EA  L+ EM ++G+ PD+ T++ +M  L   G +++A R
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
            + E +   G+ P+ +TYN LI GY L++  +HA  ++ +M  +GC  ++ +Y  L N
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 204/486 (41%), Gaps = 66/486 (13%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +EA+ +   M+R +   P V   N L   L K    D    +F R+    L P + T++ 
Sbjct: 524  DEAVNLLSEMIR-NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            L++   K GRV     +   ++    +PN ++F +L+   C    +  A  +F+K  V  
Sbjct: 583  LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 208  CEPDVFTYNT----------------------------------LINGLCRTGHTIVALN 233
            C+PDV TYNT                                  L+ GL + G    A++
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAIS 702

Query: 234  L----------------FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELF 276
            +                +E++  G      + K        +++G+C+E  F+     + 
Sbjct: 703  IARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVL 762

Query: 277  LKMKDE--------------NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             K K E               I+P + +Y  +I      +   +A  LF +M + G  PD
Sbjct: 763  CKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPD 822

Query: 323  VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
              TF++++    K+GK+ +   L + MI R   P+  TYN +I     ++ +D A   F 
Sbjct: 823  AFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFY 882

Query: 383  SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
             + S+       +Y  LI+   K   +EEA+ L+ EM   G KP    +N L  G  +I 
Sbjct: 883  DLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIG 942

Query: 443  QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
              E A +LF  M    +  D  +Y   +D LC +G V EAL  F  ++ +  + + ++YN
Sbjct: 943  DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN 1002

Query: 503  CLIDGL 508
             +I+GL
Sbjct: 1003 RIINGL 1008



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 84/171 (49%)

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
           K++  + + E M  + +  +  TY T+     +   +     +   M   G + +  SYN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
            LI+   ++    EAL +Y  M+S+G+KP++ TY+ L + L +    E  + L  EM   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  + YT+   I  L ++G + EA E+FR + D     ++V+Y  LID L
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%)

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  + ++ D+ T+  I   L   G + + + +L  M   G   N Y+YN LI     +  
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A +++  M S G    + +Y+ L+    K +D E  + L  EM   G++P V T+  
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
               L    +++ A ++F  M       D  TY   ID LC +G +  A ELF  ++ + 
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 494 YELNIVSYNCLID 506
           ++ + V Y  L+D
Sbjct: 328 HKPDQVIYITLLD 340



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 67/139 (48%)

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           +TD I      +   E    +H   + N ++ +   +  VE+  +++  M  K I+  + 
Sbjct: 99  MTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLD 158

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY T+F  L     + +   + ++MR+     + Y+YN  I  L +SGF  EALE++R +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 490 RDSKYELNIVSYNCLIDGL 508
                + ++ +Y+ L+  L
Sbjct: 219 VSEGLKPSLKTYSALMVAL 237


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 188/375 (50%), Gaps = 10/375 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G   D+Y ++ L++   +  R         R L +   P+  +FT +I+  C       A
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
                  R     PDV  YN ++ G C  G    AL  F       G+ G  CKPN  TY
Sbjct: 99  WRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKF-------GKMGKTCKPNVATY 151

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I+GLCK G +D A  LF ++  + ++PD  TY++++ G C A     A +++  M++
Sbjct: 152 NTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLE 211

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC-LTDKID 375
                D   ++ + D  CK  ++D+A  +L+ MI RG  P+  TYN +I+G C   ++I+
Sbjct: 212 ANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIE 271

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +LF  M  + C  + V+Y T+I    K  +V+  L L+  M   G+ P    Y++L 
Sbjct: 272 EAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLI 331

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS--GFVLEALELFRAIRDSK 493
               ++ +++ A  +  +  RNHV  D Y Y   I G C++    V EAL LF+ ++D +
Sbjct: 332 YAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRR 391

Query: 494 YELNIVSYNCLIDGL 508
              N+++YN ++ GL
Sbjct: 392 VWPNVITYNIVLRGL 406



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 34/399 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+  F   L  H   P + SF I+  C    ++          + S G+ PD+  +++
Sbjct: 61  REAVRFFKRELCAH-CRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNV 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  +C +GRV    +  G++ ++C  PN  T+ ++I GLC   +I  A  LFT+     
Sbjct: 120 VLKGYCDLGRVGRALIKFGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDL 178

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM--ANGNGEFGVV----------------- 248
            +PD FTY+TL++GLC+      A+ +++ M  AN +G+ G                   
Sbjct: 179 VDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEAL 238

Query: 249 ----------CKPNTVTYNTIIDGLCK-EGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                     CKP+ VTYN II+G+C+ +  +++A  LF +M   +  P+ VTY ++I G
Sbjct: 239 EVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILG 298

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
                +      LF  M   G+ PD   +  ++    K  K+D+A  +L+      V P+
Sbjct: 299 LSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPD 358

Query: 358 TYTYNTLIDGYCLTDK--IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            Y Y TLI GYC   K  +D A  LF +M+      +V++YN ++   CK    +EA  +
Sbjct: 359 VYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQI 418

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           + EM      P  +T+  + +G+    + ++  ++F +M
Sbjct: 419 FQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDM 457



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 158/324 (48%), Gaps = 13/324 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+++N +   L K    D  + LF RL    + PD +T+S L++  C+  R+     V
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L + +  +A  + ++  G C E R+ EA  +        C+P V TYN +ING+C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQ 265

Query: 225 TGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             + I  A  LF++M   +      C PN VTY T+I GL K   V +  ELF  M    
Sbjct: 266 YKNRIEEAYRLFQQMVGSD------CPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG 319

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK--MDK 341
           ++PD   Y S+I  F      +EAK +  +     V PDV  ++ ++   C+  K  +D+
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN--TL 399
           A  L + M  R V PN  TYN ++ G C T + D A ++F  M    C  + +++   T+
Sbjct: 380 ALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTM 439

Query: 400 INWYCKNKDVEEALSLYSEMLSKG 423
              +C   D  E   ++ +M+ KG
Sbjct: 440 GMIHCGKTDKFE--RIFMDMVYKG 461



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           K E    DV  YT ++     A    EA R F   +    +P + +F++I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A R L  M   G+ P+   YN ++ GYC   ++  A   F  M    C  +V +YNT+
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTV 154

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           IN  CK   ++ A+ L++ +    + P   TY+TL  GL +  ++E A+K++D M   + 
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D   YN   DG CK   V EALE+ + +     + ++V+YNC+I+G+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGV 263



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 37/168 (22%)

Query: 377 ARKLF-VSMESNGCMHDVVSYNTLINWYCKNKDVEEAL-------------SLYS----- 417
           ARK F  S +  G  HDV  Y  L++   + +   EA+             SLYS     
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 418 -----------------EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
                             M S GI P V  YN +  G  ++ +V RAL  F +M +    
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CK 145

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  TYN  I+GLCK G +  A+ LF  +     + +  +Y+ L+ GL
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGL 193


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 208/431 (48%), Gaps = 11/431 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-L 138
           G+  +I+  +A+ IF Y +++    P   ++N +   L     Y+ V  L+  +++ G  
Sbjct: 166 GNAKMIS--KAVAIF-YQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHC 222

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
           FPD  T+S LI+ FCK+GR      +L  +  +   P A  +T LI      + +  A  
Sbjct: 223 FPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALG 282

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           LF + R   C PDVFTY  LI GL + G    A N F EM          C+P+TV  N 
Sbjct: 283 LFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREG------CRPDTVVINN 336

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG-FCYANDWNEAKRLFIEMMDQ 317
           +I+ L K G +D A +LF +M      P VVTY ++I+  F   +  +E    F  M   
Sbjct: 337 MINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGS 396

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ P   T+S+++D  CK  + +KA  LLE M  +G  P    Y +LID      + D A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIA 456

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            +LF  ++ N        Y  +I    K   +++A++L+ EM   G  P V  YN L  G
Sbjct: 457 HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSG 516

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L     ++ AL     M+ +    D  +YN  ++GL K+G    A+E+   ++ S  + +
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576

Query: 498 IVSYNCLIDGL 508
            VSYN ++  +
Sbjct: 577 AVSYNTVLGAM 587



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 172/356 (48%), Gaps = 11/356 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAA 197
           D  T+  LI C   + +    + ++  ++R+     TP  +  + +I+ L     I +A 
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTP--MELSDIIRMLGNAKMISKAV 175

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
           A+F + +V  C+P    YN++I  L   G       L+ EM+N        C P+TVTY+
Sbjct: 176 AIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGH-----CFPDTVTYS 230

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I   CK G  D A  L  +MKD  + P    YT +I  F   N+ + A  LF EM  Q
Sbjct: 231 ALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQ 290

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
             +PDV T++ ++  L K G+ D+A      M   G  P+T   N +I+      ++D A
Sbjct: 291 YCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA 350

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            KLF  M +  C+  VV+YNT+I    ++K  + E  S +  M   GI P+  TY+ L  
Sbjct: 351 VKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           G  + ++ E+A+ L +EM           Y + ID L K+     A ELF+ ++++
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKEN 466



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 6/233 (2%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--ELCKNG 337
           K  N   D  TY ++IR       + E  ++  EM+   V   VVT   + D   +  N 
Sbjct: 111 KKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVC--VVTPMELSDIIRMLGNA 168

Query: 338 KM-DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVVS 395
           KM  KA  +   +  R   P    YN++I       + +   +L+  M + G C  D V+
Sbjct: 169 KMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVT 228

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+ LI+ +CK    + A+ L +EM   G++PT   Y  L    F+++ V  AL LF+EMR
Sbjct: 229 YSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMR 288

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +   D +TY   I GL K+G   EA   F  +R      + V  N +I+ L
Sbjct: 289 HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFL 341



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 9/166 (5%)

Query: 70  LKERCKSSGQGDINLITP--------NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           LKE C SS      ++          ++A+ +FD M ++  +P  V ++N L   LA+  
Sbjct: 463 LKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPN-VYAYNALMSGLARAG 521

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
             D  L+  +R+   G  PDI +++I++N   K G       +L  + +S   P+AV++ 
Sbjct: 522 MLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYN 581

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +++  +       EAA L  +  V   E D+ TY++++  + +  H
Sbjct: 582 TVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 215/413 (52%), Gaps = 14/413 (3%)

Query: 104 PPPVSSFNI--LFGCLAKNKHYDTVLSLFKRLNSA--GLFPDIYTHSILINCFCKMGRVS 159
           P  VS  ++  L   LAK+   D   S F+   S      P +Y +++++    +  +V 
Sbjct: 74  PQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVD 133

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
               +   ++ +  +P   T   LI GLC   R  +A  +F K  V  C P+ F++  L+
Sbjct: 134 SFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILV 193

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
            G CR G ++ AL    E+ +G G FGV  +PN V YNT+I   C+EG  ++A+ L  +M
Sbjct: 194 RGYCRAGLSMRAL----ELLDGMGSFGV--QPNKVIYNTLISSFCREGRNEEAERLVERM 247

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM-MDQGV---QPDVVTFSVIMDELCK 335
           +++ + PDVVT+ S I   C A    EA R+F +M +D+ +   +P++ TF+++++  CK
Sbjct: 248 REDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCK 307

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G +++A  L+E M   G      +YN  + G     K+  A+     M   G   ++ S
Sbjct: 308 EGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYS 367

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           +NT+++  CKN  + +A  +   M+S GI P  VTY+TL  G     +V +A  +  EM 
Sbjct: 368 FNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMM 427

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           R   + +TYT N  +  L K G + EA +L + + +  Y+L+ V+ N +IDGL
Sbjct: 428 RRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGL 480



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 221/460 (48%), Gaps = 65/460 (14%)

Query: 107 VSSFNI-LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVL 165
           + S+NI L G +   K  +  L+L K +   G+ P+IY+ + +++  CK G +S   +++
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQLAL-KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
           G ++ S   P+ VT+++L+ G C+  ++++A  +  +     C P+ +T N L++ L + 
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE 448

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL---------- 275
           G    A  L ++M   + +       + VT N +IDGLCK G +D+A E+          
Sbjct: 449 GRIFEAEKLLQKMNERSYDL------DNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSA 502

Query: 276 --------FLKMKDENIN-----PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
                   F+ + D + N     PD++TY+ +I G C A   +EA++ FIEM+ + + PD
Sbjct: 503 ALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPD 562

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            + +   +   CK+GK+  A R+L+ M  RG N +  TYN+LI G    ++I     L  
Sbjct: 563 SIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLD 622

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG----- 437
            M+  G   ++ +YN +I+  C+   +++A SL  EML KGI P + ++  L        
Sbjct: 623 DMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKAS 682

Query: 438 -------LFEI----------------------HQVERALKLFDEMRRNHVAADTYTYNN 468
                  +FEI                       +V  A +LFD           + YN+
Sbjct: 683 DFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYND 742

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I+ LCK   +  A ++   + D  Y  +  S+  +IDGL
Sbjct: 743 LIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGL 782



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 210/462 (45%), Gaps = 60/462 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   + N+L   L  +  ++    +F ++   G  P+ ++  IL+  +C+ G       +
Sbjct: 149 PETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALEL 208

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN V + +LI   C E R  EA  L  + R     PDV T+N+ I+ LC 
Sbjct: 209 LDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCS 268

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  +F +M   + E G+  +PN  T+N +++G CKEG +++AK L   MK    
Sbjct: 269 AGKILEASRIFRDMQI-DEELGLP-RPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGN 326

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             ++ +Y   + G        EA+    EM+D+G++P++ +F+ +MD LCKNG +  A  
Sbjct: 327 LMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARM 386

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC----------MH--- 391
           ++ LMI  G+ P+T TY+TL+ G C T K+  A  +   M   GC          +H   
Sbjct: 387 IMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLW 446

Query: 392 ----------------------DVVSYNTLINWYCKNKDVEEALSLYSEML--------- 420
                                 D V+ N +I+  CK+  ++EA+ +   M          
Sbjct: 447 KEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGN 506

Query: 421 ------------SKGIK--PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
                       S G K  P ++TY+ +  GL +  +++ A K F EM    +  D+  Y
Sbjct: 507 LGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIY 566

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + FI   CK G +  A  + + +       ++ +YN LI GL
Sbjct: 567 DTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGL 608



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 10/296 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +++I+   L K    D     F  +    L PD   +   I+ FCK G++S  F V
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +     +  T+ SLI GL ++++I E   L    +     P++ TYN +I+ LC 
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A +L +EM     + G+   PN  ++  +I   CK       KE+F ++     
Sbjct: 646 GGRIKDATSLLDEML----QKGI--SPNISSFRLLIKAFCKASDFGVVKEVF-EIALSIC 698

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                 Y+ +        + +EAK LF   +D+        ++ ++++LCK+  ++ AS 
Sbjct: 699 GHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASD 758

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL---FVSMESNGCMHDVVSYN 397
           +L  MI +G   +  ++  +IDG     K   A +L    + M S G + + ++ N
Sbjct: 759 ILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRN 814


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 80/494 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A C+F  M+      P +   N +   L K K  D   S+ +++  +G+ PD++T+S+
Sbjct: 151 DKAHCLFLEMME-QGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL-----IKGLCAES----------- 191
           +I+  CK   +     VL +++ +   PN++T+ SL     I G+  ES           
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 192 -------------------RIMEAAALFTKHRVFACEPDVFTYNT--------------- 217
                              R  EA  +F    +   +PD+ +Y+T               
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329

Query: 218 ----------------------LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
                                 LIN   R G    A+ +FE+M N     G++  P+TVT
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVT 383

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           + T+I  LC+ G +D A   F  M D  + P    Y  +I+G C   +  +AK L  EMM
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 443

Query: 316 DQGVQPDVVT-FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ + P  V  FS I++ LCK G++ +   ++++M+  G  PN  T+N+L++GYCL   +
Sbjct: 444 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 503

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  L  +M S G   +   Y TL++ YCKN  +++AL+++ +ML KG+KPT V Y+ +
Sbjct: 504 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 563

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A K+F EM  +      +TY   + GLC++    EA  L   +     
Sbjct: 564 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 623

Query: 495 ELNIVSYNCLIDGL 508
           + +I+++N +I  +
Sbjct: 624 KFDIITFNIVISAM 637



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 6/408 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA CIFD M+   P P  +S   +L G   A +     V ++F  + + G+ P+ +  +
Sbjct: 291 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 350

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILIN + + G +    ++   +      P+ VTF ++I  LC   R+ +A   F      
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P    Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCKE
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKE 465

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V + K++   M      P+VVT+ S++ G+C   +  EA  L   M   G++P+   +
Sbjct: 466 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 525

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++D  CKNG++D A  +   M+ +GV P +  Y+ ++ G     +   A+K+F  M  
Sbjct: 526 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 585

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G    + +Y  ++   C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + + 
Sbjct: 586 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 645

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           A +LFD +    +  +  TY+  I  L K     EA  LF ++  S +
Sbjct: 646 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 693



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 201/408 (49%), Gaps = 10/408 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SPP + ++NIL  C  +    D  L++  RL   GL PD +++S LI  F K G V    
Sbjct: 96  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 154

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   ++     P  +   S+IK LC    + +A ++  K       PD+FTY+ +I+GL
Sbjct: 155 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 214

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C++     A  + E+M           +PN++TYN++I G    G  +++  +F +M   
Sbjct: 215 CKSKAMDKAERVLEQMVEAG------TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 268

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--ELCKNGKMD 340
            + P V    S I         NEAK +F  M+ +G +PD++++S ++       +  + 
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 328

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
               +  LM+ +G+ PN + +N LI+ Y     +D A  +F  M++ G + D V++ T+I
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  C+   +++AL  ++ M+  G+ P+   Y  L  G     ++ +A +L  EM    + 
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 448

Query: 461 ADTYTY-NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                Y ++ I+ LCK G V E  ++   +  +    N+V++N L++G
Sbjct: 449 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 496



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 215/461 (46%), Gaps = 48/461 (10%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+  L I   +L+    P   S +++++G   K+   D    LF  +   G+ P I   +
Sbjct: 116 PDLGLAIVGRLLKNGLGPDDFS-YSLIYG-FVKDGEVDKAHCLFLEMMEQGVLPKILICN 173

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I   CKM  +     ++ +++ S   P+  T++ +I GLC +S+ M+ A    +  V 
Sbjct: 174 SIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC-KSKAMDKAERVLEQMVE 232

Query: 207 A-CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           A   P+  TYN+LI+G   +G    ++ +F++M++     GV+  P     N+ I  L K
Sbjct: 233 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSS----CGVI--PTVDNCNSFIHALFK 286

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND---------------------- 303
            G  ++AK +F  M  +   PD+++Y++++ G+  A D                      
Sbjct: 287 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 346

Query: 304 ---------------WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
                           ++A  +F +M ++G+ PD VTF+ ++  LC+ G++D A      
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 406

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY-NTLINWYCKNK 407
           M+  GV P+   Y  LI G C   ++  A++L   M +       V Y +++IN  CK  
Sbjct: 407 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 466

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V E   +   M+  G +P VVT+N+L  G   +  +E A  L D M    +  + Y Y 
Sbjct: 467 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 526

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DG CK+G + +AL +FR +     +   V Y+ ++ GL
Sbjct: 527 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 567


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 205/408 (50%), Gaps = 14/408 (3%)

Query: 103 SPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           +PPP           C  +N     VL ++  +   G+ P+++T+++L+   C+  RV  
Sbjct: 119 APPPSRGSTTTSSTRCCGENMVGAVVL-VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGA 177

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L  + R    P+ VT+ +++  LC   R+ EA  +       A  P   +YN ++ 
Sbjct: 178 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-----AMPPVAASYNAIVL 232

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            LCR        ++  +M  G G      +PN +TY TI+D  CK G +  A  +  +M 
Sbjct: 233 ALCREFRMQEVFSVVSDMV-GRG-----LQPNVITYTTIVDAFCKAGELRMACAILARMV 286

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
                P+VVT+T+++RG       ++A  ++  M+ +G  P  V++++++  LC  G + 
Sbjct: 287 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLK 346

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            AS +L  M   G  PN  TY+TLIDG+     +  A  ++  M  +GC  +VV Y  ++
Sbjct: 347 GASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMV 406

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           + +CK     +A SL  +ML +   P  VT+NTL   L +  +V RAL +F EMRR+   
Sbjct: 407 DVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCV 466

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  TYN  I GL + G   +AL +   ++    EL++V+YN ++ GL
Sbjct: 467 PNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGL 514



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 212/451 (47%), Gaps = 13/451 (2%)

Query: 64  ASLKKFLKERC-KSSGQGDINLITPNEALCIFDYMLR----MHPSPPPVSSFNILFGCLA 118
            + +K L E   K     D+   T    LC  D +      +   PP  +S+N +   L 
Sbjct: 176 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALC 235

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           +      V S+   +   GL P++ T++ +++ FCK G +     +L R++ +  TPN V
Sbjct: 236 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 295

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           TFT+L++GL  + R+ +A  ++         P   +YN LI GLC  G    A ++   M
Sbjct: 296 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 355

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                     C PN  TY+T+IDG  K G +  A  ++  M      P+VV YT+++  F
Sbjct: 356 EQHG------CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVF 409

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C    +N+AK L  +M+ +   P+ VTF+ ++  LC   ++ +A  +   M   G  PN 
Sbjct: 410 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 469

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYN LI G         A  +   M+S+G    +V+YNT+++  C+ +   EA+    +
Sbjct: 470 RTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGK 529

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+ +GI+P   T++ +     +  +V  A  +   M   +   +   Y   +  LC    
Sbjct: 530 MIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDK 589

Query: 479 VLEALE-LFRAIRDSKYELNIVSYNCLIDGL 508
           +++A+  L + + +  Y  N V++N L+ G+
Sbjct: 590 LVDAMTYLLKMLYEGIYP-NTVTWNVLVRGV 619


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 80/494 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A C+F  M+      P +   N +   L K K  D   S+ +++  +G+ PD++T+S+
Sbjct: 65  DKAHCLFLEMME-QGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL-----IKGLCAES----------- 191
           +I+  CK   +     VL +++ +   PN++T+ SL     I G+  ES           
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 192 -------------------RIMEAAALFTKHRVFACEPDVFTYNT--------------- 217
                              R  EA  +F    +   +PD+ +Y+T               
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243

Query: 218 ----------------------LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
                                 LIN   R G    A+ +FE+M N     G++  P+TVT
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVT 297

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           + T+I  LC+ G +D A   F  M D  + P    Y  +I+G C   +  +AK L  EMM
Sbjct: 298 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 357

Query: 316 DQGVQPDVVT-FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ + P  V  FS I++ LCK G++ +   ++++M+  G  PN  T+N+L++GYCL   +
Sbjct: 358 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 417

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  L  +M S G   +   Y TL++ YCKN  +++AL+++ +ML KG+KPT V Y+ +
Sbjct: 418 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 477

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A K+F EM  +      +TY   + GLC++    EA  L   +     
Sbjct: 478 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 537

Query: 495 ELNIVSYNCLIDGL 508
           + +I+++N +I  +
Sbjct: 538 KFDIITFNIVISAM 551



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 6/408 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA CIFD M+   P P  +S   +L G   A +     V ++F  + + G+ P+ +  +
Sbjct: 205 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 264

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILIN + + G +    ++   +      P+ VTF ++I  LC   R+ +A   F      
Sbjct: 265 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P    Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCKE
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKE 379

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V + K++   M      P+VVT+ S++ G+C   +  EA  L   M   G++P+   +
Sbjct: 380 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 439

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++D  CKNG++D A  +   M+ +GV P +  Y+ ++ G     +   A+K+F  M  
Sbjct: 440 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 499

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G    + +Y  ++   C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + + 
Sbjct: 500 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 559

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           A +LFD +    +  +  TY+  I  L K     EA  LF ++  S +
Sbjct: 560 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 607



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 201/408 (49%), Gaps = 10/408 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SPP + ++NIL  C  +    D  L++  RL   GL PD +++S LI  F K G V    
Sbjct: 10  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 68

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   ++     P  +   S+IK LC    + +A ++  K       PD+FTY+ +I+GL
Sbjct: 69  CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 128

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C++     A  + E+M           +PN++TYN++I G    G  +++  +F +M   
Sbjct: 129 CKSKAMDKAERVLEQMVEAG------TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 182

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--ELCKNGKMD 340
            + P V    S I         NEAK +F  M+ +G +PD++++S ++       +  + 
Sbjct: 183 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 242

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
               +  LM+ +G+ PN + +N LI+ Y     +D A  +F  M++ G + D V++ T+I
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  C+   +++AL  ++ M+  G+ P+   Y  L  G     ++ +A +L  EM    + 
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362

Query: 461 ADTYTY-NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                Y ++ I+ LCK G V E  ++   +  +    N+V++N L++G
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 410



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 215/461 (46%), Gaps = 48/461 (10%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+  L I   +L+    P   S +++++G   K+   D    LF  +   G+ P I   +
Sbjct: 30  PDLGLAIVGRLLKNGLGPDDFS-YSLIYG-FVKDGEVDKAHCLFLEMMEQGVLPKILICN 87

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            +I   CKM  +     ++ +++ S   P+  T++ +I GLC +S+ M+ A    +  V 
Sbjct: 88  SIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC-KSKAMDKAERVLEQMVE 146

Query: 207 A-CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           A   P+  TYN+LI+G   +G    ++ +F++M++     GV+  P     N+ I  L K
Sbjct: 147 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSS----CGVI--PTVDNCNSFIHALFK 200

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND---------------------- 303
            G  ++AK +F  M  +   PD+++Y++++ G+  A D                      
Sbjct: 201 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 260

Query: 304 ---------------WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
                           ++A  +F +M ++G+ PD VTF+ ++  LC+ G++D A      
Sbjct: 261 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 320

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY-NTLINWYCKNK 407
           M+  GV P+   Y  LI G C   ++  A++L   M +       V Y +++IN  CK  
Sbjct: 321 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 380

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V E   +   M+  G +P VVT+N+L  G   +  +E A  L D M    +  + Y Y 
Sbjct: 381 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 440

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DG CK+G + +AL +FR +     +   V Y+ ++ GL
Sbjct: 441 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 481


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 209/422 (49%), Gaps = 17/422 (4%)

Query: 82  INLITPNEALCIFDYMLRMHPSPPP-----VSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           + L  P+ A  + D + R   +  P      S  + L   LA     D  +    R+   
Sbjct: 92  VALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVREL 151

Query: 137 GLFPDIYT-HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
            + P+  T + IL+    ++ R   G +V  R+      PN  TF  +I  LC E  + E
Sbjct: 152 RVPPNTRTCNHILL----RLARDRSGRLV-RRLFEQLPAPNVFTFNIVIDFLCKEGELAE 206

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A +LF++ +   C PDV T+N+LI+G  + G       L EEM          CK + VT
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVVT 260

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +I+  CK G ++ A   F  MK E +  +VVT+++ +  FC      EA +LF +M 
Sbjct: 261 YNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+  +  T++ ++D  CK G++D A  LL+ M+ +GV  N  TY  L+DG C   K+ 
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVA 380

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  +   ME  G   + + Y TLI+ +  NK+ E+AL L SEM +KG++  +  Y  L 
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL  +H+++ A  L  +M  + +  +   Y   +D   KSG V EA+ + + I DS ++
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQ 500

Query: 496 LN 497
            N
Sbjct: 501 PN 502



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 206/426 (48%), Gaps = 32/426 (7%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP   + N +   LA+++    V  LF++L +    P+++T +I+I+  CK G ++    
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARS 209

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +  R+      P+ VTF SLI G      + E   L  + R   C+ DV TYN LIN  C
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A   F  M       GV+   N VT++T +D  CKEG V +A +LF +M+   
Sbjct: 270 KFGRMETAYGYFAAMKRE----GVMA--NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRG 323

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +  +  TYT +I G C A   ++A  L  EM+ QGV  +VVT++V++D LCK  K+ +A 
Sbjct: 324 MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE 383

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            +L +M   GV  N   Y TLI G+ +    + A  L   M++ G   D+  Y  LI   
Sbjct: 384 DVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGL 443

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL--------------- 448
           C    ++EA SL ++M   G++P  + Y T+    F+  +V  A+               
Sbjct: 444 CNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNN 503

Query: 449 -------KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
                  +LF+EM    ++ D   Y   +DG  K G + +A  L   + DS  +L++  Y
Sbjct: 504 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 563

Query: 502 NCLIDG 507
            C I G
Sbjct: 564 TCFISG 569



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 191/417 (45%), Gaps = 20/417 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  M  M    P V +FN L     K    D V  L + +  +G   D+ T++ L
Sbjct: 206 EARSLFSRMKEM-GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNAL 264

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           INCFCK GR+   +     + R     N VTF++ +   C E  + EA  LF + RV   
Sbjct: 265 INCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGM 324

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             + FTY  LI+G C+ G    A+ L +EM             N VTY  ++DGLCKE  
Sbjct: 325 ALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVVTYTVLVDGLCKERK 378

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V +A+++   M+   +  + + YT++I G     +  +A  L  EM ++G++ D+  +  
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++  LC   K+D+A  LL  M   G+ PN   Y T++D    + K+  A  +   +  +G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
                        +   N  + EA+ L++EM+ KG+    V Y  L  G  +   +  A 
Sbjct: 499 -------------FQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF 545

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            L  +M  + +  D + Y  FI G C    + EA E+F  +       +   YNCLI
Sbjct: 546 ALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 160/332 (48%), Gaps = 10/332 (3%)

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
           A    +L+  L     + +A     + R     P+  T N ++  L R     +   LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           ++            PN  T+N +ID LCKEG + +A+ LF +MK+    PDVVT+ S+I 
Sbjct: 182 QLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G+    + +E ++L  EM   G + DVVT++ +++  CK G+M+ A      M   GV  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N  T++T +D +C    +  A KLF  M   G   +  +Y  LI+  CK   +++A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            EM+ +G+   VVTY  L  GL +  +V  A  +   M +  V A+   Y   I G   +
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               +AL L   +++   EL+I  Y  LI GL
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGL 443


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L     +   +     L + + +   FP + T++ L+   CK  +V+   +    +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L+S FTP+ V+F SL+ G C    I EA  LF + +     P V TYNTLI+GLC  G+ 
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L +EM +  G F     P+  TY  +++G  K G+V  A+  F +M  + + PD 
Sbjct: 407 DAALRLKKEMTD-QGLF-----PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y + I G     D + A  +  EM+  G  PDV+T++V +  LC+ G  ++A  LLE 
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G+ P+  TY ++I+G+     +  AR++F  M S G    VV+Y  LI+ +   + 
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A   +S+ML K +   V+TYN +  GL    +++ A K FDEM    +  + ++Y  
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I+  C  G+  EAL L+R + D K + +  +++  +  L
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 11/430 (2%)

Query: 79  QGDINLITPNEALC--IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
            G ++++      C  +FD M+R +   P V + N +   L          +++  +   
Sbjct: 151 HGVVDVLIAGHVXCLLVFDKMIR-NGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIME 195
           G+ P + T++ +++ +CK GRV     +L  +  R C+ PN VT+  L+ GL  +  + +
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQ 268

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L  +          +TYN LING C+ G  + A +L EEM N          P   T
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA------FPTLST 322

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT++ GLCK   V   +  F  M      PD+V++ S++ G+C     +EA  LF E+ 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P V+T++ ++  LC  G +D A RL + M  +G+ P+ +TY  L++G      + 
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            AR  F  M S G   D  +YNT I    K  D   A S+  EML+ G  P V+TYN   
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L +    E A  L + M  + +  D  TY + I+G  K+G + +A E+F  +      
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 496 LNIVSYNCLI 505
            ++V+Y  LI
Sbjct: 563 PSVVTYTVLI 572



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 178/385 (46%), Gaps = 32/385 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +S++N L   L K      V   F  +  +   PDI + + L+  +C+ G +S  F++
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P  +T+ +LI GLC    +  A  L  +       PD+FTY  L+NG  +
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 225 TGHTIVALNLFEEMANGN-------------GEFGVV----------------CKPNTVT 255
            G+  +A   F EM +               GE  +                   P+ +T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN  +  LC++G  ++A +L   M  + + PD VTYTS+I GF       +A+ +F EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +GV P VVT++V++        +D A      M+ + V  N  TYN +I+G C+T ++D
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A K F  ME  G + +  SY  LIN  C     EEAL LY EML + I+P   T++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 436 LGL---FEIHQVERALKLFDEMRRN 457
             L   +++H V+    L   +  N
Sbjct: 678 KNLHRDYQVHAVQCVESLIQNVEDN 702



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 146/278 (52%), Gaps = 5/278 (1%)

Query: 233 NLFEEMANGNG---EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           NL  +  N  G   +FG+  KP  VTYNT++D  CKEG VD+A EL  +M++    P+ V
Sbjct: 194 NLLSKAKNVYGMMEQFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  ++ G     +  +AK L  EM++ G+     T++ +++  C+ G   +A  L+E M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + R   P   TYNTL+ G C   ++   R  F  M  +    D+VS+N+L+  YC+   +
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            EA  L+ E+  + + PTV+TYNTL  GL     ++ AL+L  EM    +  D +TY   
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++G  K G+V  A   F  +     + +  +YN  I G
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 125/234 (53%)

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           +F KM    + PDV     ++R     N  ++AK ++  M   G++P VVT++ ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G++D+A  LL  M  RG  PN  TYN L++G     +++ A+ L   M ++G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +YN LIN +C+     EA  L  EM+++   PT+ TYNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++    D  ++N+ + G C++G + EA  LF  ++       +++YN LI GL
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 8/220 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++N+    L +  +++    L + + S GL PD  T++ +IN F K G +     
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V   +L     P+ VT+T LI    A+  +  A   F+K    +   +V TYN +INGLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            T     A   F+EM     E G++  PN  +Y  +I+  C  G+ ++A  L+ +M D  
Sbjct: 612 MTRRMDEAYKYFDEME----EKGIL--PNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           I PD  T++  ++      D+       +E + Q V+ ++
Sbjct: 666 IQPDSFTHSVFLKNL--HRDYQVHAVQCVESLIQNVEDNI 703



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%)

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L ++ +M+  G+ P V   N +   L + + + +A  ++  M +  +     TYN  +D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            CK G V +ALEL   +++     N V+YN L++GL
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 185/339 (54%), Gaps = 12/339 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N L   L K   +D +  L+  + S  LFP + T+++L++  C+ G V     +
Sbjct: 149 PAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSL 208

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +++    P  V +T+LI GLC+ES++MEA ++F + +     P+++TYN L++G C+
Sbjct: 209 ISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCK 268

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +   AL+L++ M +         +PN VT+  +ID LCK   +  A+  F++M    +
Sbjct: 269 TANVKQALHLYQGMLDDG------LQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGV 322

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV + S+I G+  A + +EA  L +EM    + PDV T+S+++   C+ G +++A  
Sbjct: 323 VPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADD 382

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA------RKLFVSMESNGCMHDVVSYNT 398
           +L+ M   GV  N+  YN+LIDGYC    ++ A       K F  M  NG   D ++Y  
Sbjct: 383 ILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAV 442

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
           ++  +   K + + + L+++M+  GI P  VT   +  G
Sbjct: 443 MLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRG 481



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 209/431 (48%), Gaps = 32/431 (7%)

Query: 86  TPNEALCIFDYMLRMHPSPP--PVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           TP +AL  F  +L+ +P+ P   +  ++ +   L   K Y T   L K L          
Sbjct: 39  TPEQALDTFTSVLKQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDL---------- 88

Query: 144 THSILINCFCKMGRV-SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
             ++L +C  +  RV S  F  L ++  S F P+   F  LI        + EA  ++ K
Sbjct: 89  IQTLLQSCTPR--RVNSLVFNALSQLRGSKFNPS--VFGVLIIAFSEVGLVDEALRVYLK 144

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
              F   P V   N L+NGL +     +   L+  M +          P  VTYN ++D 
Sbjct: 145 VGAF---PAVQACNALLNGLLKKSSFDIMWELYNNMVSRR------LFPTVVTYNVLVDA 195

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            C++G V +AK L  +M  + I P VV YT++I G C  +   EA+ +F +M D GV P+
Sbjct: 196 CCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPN 255

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           + T++V+MD  CK   + +A  L + M+  G+ PN  T+  LID  C   ++  AR+ FV
Sbjct: 256 LYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFV 315

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M   G + +VV +N+LI+ Y K  +  EA  L  EM    I P V TY+ L      + 
Sbjct: 316 QMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLG 375

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA------IRDSKYEL 496
            VE A  +   M +  V A++  YN+ IDG CK G + +ALE+F+A      +R +    
Sbjct: 376 TVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRP 435

Query: 497 NIVSYNCLIDG 507
           + ++Y  ++ G
Sbjct: 436 DALAYAVMLQG 446



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 229/501 (45%), Gaps = 30/501 (5%)

Query: 7   TRSFHFTSISISALRCNFSSSFPHTRKPT------SSISENEPSYPTTTSKLKESLRLTV 60
           T+   FTS+S  +   + ++   H++ P       +S+ +  P+ PT    L  ++   +
Sbjct: 16  TKIRFFTSLSPPS---DLTTIILHSKTPEQALDTFTSVLKQNPNNPTKKLHLYSAV---I 69

Query: 61  KDRASLKKFLKERC--KSSGQGDINLITPNEA-LCIFDYMLRMHPSPPPVSSFNILFGCL 117
                 K +   RC  K   Q  +   TP      +F+ + ++  S    S F +L    
Sbjct: 70  HYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFNALSQLRGSKFNPSVFGVLIIAF 129

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
           ++    D  L ++ ++   G FP +   + L+N   K       + +   ++     P  
Sbjct: 130 SEVGLVDEALRVYLKV---GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTV 186

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           VT+  L+   C +  ++ A +L ++      EP V  Y TLI+GLC     + A ++F +
Sbjct: 187 VTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQ 246

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M + +G F     PN  TYN ++DG CK   V +A  L+  M D+ + P+VVT+  +I  
Sbjct: 247 MKD-SGVF-----PNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDA 300

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            C   +   A+R F++M   GV P+VV F+ ++D   K G   +A+ LL  M    ++P+
Sbjct: 301 LCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPD 360

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY- 416
            +TY+ LI   C    ++ A  +   ME  G   + V YN+LI+ YCK  ++E+AL ++ 
Sbjct: 361 VFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFK 420

Query: 417 -----SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
                S+M   G++P  + Y  +  G      +   + L  +M +  +  +  T      
Sbjct: 421 ATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRR 480

Query: 472 GLCKSGFVLEALELFRAIRDS 492
           G   +G++  AL   R + +S
Sbjct: 481 GYQDNGYLKSALWCSRDLTES 501



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 99/184 (53%), Gaps = 3/184 (1%)

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            F V++    + G +D+A   L + +  G  P     N L++G       D   +L+ +M
Sbjct: 121 VFGVLIIAFSEVGLVDEA---LRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNM 177

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S      VV+YN L++  C+  DV  A SL SEM+ KGI+PTVV Y TL  GL    ++
Sbjct: 178 VSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKL 237

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
             A  +F +M+ + V  + YTYN  +DG CK+  V +AL L++ + D   + N+V++  L
Sbjct: 238 MEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGIL 297

Query: 505 IDGL 508
           ID L
Sbjct: 298 IDAL 301


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 80/494 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A C+F  M+      P +   N +   L K K  D   S+ +++  +G+ PD++T+S+
Sbjct: 227 DKAHCLFLEMME-QGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL-----IKGLCAES----------- 191
           +I+  CK   +     VL +++ +   PN++T+ SL     I G+  ES           
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 192 -------------------RIMEAAALFTKHRVFACEPDVFTYNT--------------- 217
                              R  EA  +F    +   +PD+ +Y+T               
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 405

Query: 218 ----------------------LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
                                 LIN   R G    A+ +FE+M N     G++  P+TVT
Sbjct: 406 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVT 459

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           + T+I  LC+ G +D A   F  M D  + P    Y  +I+G C   +  +AK L  EMM
Sbjct: 460 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 519

Query: 316 DQGVQPDVVT-FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ + P  V  FS I++ LCK G++ +   ++++M+  G  PN  T+N+L++GYCL   +
Sbjct: 520 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 579

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           + A  L  +M S G   +   Y TL++ YCKN  +++AL+++ +ML KG+KPT V Y+ +
Sbjct: 580 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 639

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             GLF+  +   A K+F EM  +      +TY   + GLC++    EA  L   +     
Sbjct: 640 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 699

Query: 495 ELNIVSYNCLIDGL 508
           + +I+++N +I  +
Sbjct: 700 KFDIITFNIVISAM 713



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 6/408 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           NEA CIFD M+   P P  +S   +L G   A +     V ++F  + + G+ P+ +  +
Sbjct: 367 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 426

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ILIN + + G +    ++   +      P+ VTF ++I  LC   R+ +A   F      
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              P    Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCKE
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKE 541

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V + K++   M      P+VVT+ S++ G+C   +  EA  L   M   G++P+   +
Sbjct: 542 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 601

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
             ++D  CKNG++D A  +   M+ +GV P +  Y+ ++ G     +   A+K+F  M  
Sbjct: 602 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 661

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           +G    + +Y  ++   C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + + 
Sbjct: 662 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 721

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           A +LFD +    +  +  TY+  I  L K     EA  LF ++  S +
Sbjct: 722 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 769



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 208/428 (48%), Gaps = 13/428 (3%)

Query: 86  TPNEALCIFDYMLRM---HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
            P  A+ +F  M R      SPP + ++NIL  C  +    D  L++  RL   GL PD 
Sbjct: 152 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD 211

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +++S LI  F K G V     +   ++     P  +   S+IK LC    + +A ++  K
Sbjct: 212 FSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  PD+FTY+ +I+GLC++     A  + E+M           +PN++TYN++I G
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSITYNSLIHG 324

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
               G  +++  +F +M    + P V    S I         NEAK +F  M+ +G +PD
Sbjct: 325 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384

Query: 323 VVTFSVIMD--ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           ++++S ++       +  +     +  LM+ +G+ PN + +N LI+ Y     +D A  +
Sbjct: 385 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 444

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F  M++ G + D V++ T+I+  C+   +++AL  ++ M+  G+ P+   Y  L  G   
Sbjct: 445 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 504

Query: 441 IHQVERALKLFDEMRRNHVAADTYTY-NNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
             ++ +A +L  EM    +      Y ++ I+ LCK G V E  ++   +  +    N+V
Sbjct: 505 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 564

Query: 500 SYNCLIDG 507
           ++N L++G
Sbjct: 565 TFNSLMEG 572


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 213/419 (50%), Gaps = 7/419 (1%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL + D ML +H   P V+S + +   L K  H D    L   L   G+ P+++  + LI
Sbjct: 284 ALEMTDDMLSLH-FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALI 342

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK  R      +   +      PN VT+  LI  LC    + +A  +F + R     
Sbjct: 343 DKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIR 402

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
             V+ YN+LING C+  +   A  L  EM     E G+   P+  +Y+ +I GLC++G +
Sbjct: 403 VTVYPYNSLINGYCQHDNFHQARGLLNEMV----EKGLA--PSAASYSPLIAGLCRKGDL 456

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A EL  +M    ++ +V T+T++I GFC   + +EA RLF +M+D  V P+ VTF+V+
Sbjct: 457 ASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVM 516

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  C+ G + KA +L + M+ RG+ P+ YTY +LI   CLT     A++    +E+N  
Sbjct: 517 IEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCV 576

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           + +  S  TL+  +CK   + E   ++ EM ++G+K  ++++  +     ++H  E+   
Sbjct: 577 VLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LF EM+   V  D   +   ID   K   +++AL  +  +       N+V+Y  LI+ L
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHL 695



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 196/396 (49%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N+L   L +N      + +   +   G+  D  T+  L+  FC+   +     +   +L
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
              F P+  + + ++ GL     I +A  L          P++F  N LI+ LC+     
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  LF  MAN   E      PN VTY  +I  LCK G +D A  +F +M+++ I   V 
Sbjct: 353 EAERLFRGMANRGLE------PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVY 406

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y S+I G+C  +++++A+ L  EM+++G+ P   ++S ++  LC+ G +  A  L   M
Sbjct: 407 PYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREM 466

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              GV+ N YT+ TLI G+C    +D A +LF  M  +  + + V++N +I  YC+  +V
Sbjct: 467 ARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNV 526

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            +A  LY +M+ +G+ P   TY +L   L       +A +  D++  N V  ++++    
Sbjct: 527 RKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTL 586

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           + G CK G + E   ++  +R    +L+++S+  ++
Sbjct: 587 MYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 196/401 (48%), Gaps = 7/401 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           ++  ILF  L K + +     LF  +       D Y ++  I  +C++  +     +L R
Sbjct: 162 TASQILFA-LIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTR 220

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +       +AV +  L+ GLC  +R++EA  +           D  TY TL+ G CRT  
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             +AL + ++M        +   P+  + + ++DGL K G +DKA  L   + +  + P+
Sbjct: 281 LEMALEMTDDM------LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPN 334

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           +    ++I   C    + EA+RLF  M ++G++P+ VT+++++  LCK G MD A  + +
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFD 394

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G+    Y YN+LI+GYC  D    AR L   M   G      SY+ LI   C+  
Sbjct: 395 RMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKG 454

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           D+  A+ L+ EM   G+   V T+ TL  G  +   ++ A +LFD+M  + V  +  T+N
Sbjct: 455 DLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFN 514

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             I+G C+ G V +A +L+  + D     +  +Y  LI  L
Sbjct: 515 VMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVL 555



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 199/408 (48%), Gaps = 14/408 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + N L   L K++ +     LF+ + + GL P+  T++ILI+  CK G +     +
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+           + SLI G C      +A  L  +       P   +Y+ LI GLCR
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ L  EMA  NG  G     N  T+ T+I G CK+G +D+A  LF KM D ++
Sbjct: 453 KGDLASAMELHREMAR-NGVSG-----NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VT+  +I G+C   +  +A +L+ +M+D+G+ PD  T+  ++  LC      KA  
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKE 566

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            ++ +    V  N+++  TL+ G+C   ++     ++  M + G   D++S+  ++    
Sbjct: 567 FVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAAL 626

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE----RALKLFDEMRRNHVA 460
           K  D E+   L+ EM  KG+KP     N     + ++H  E    +AL  +D+M  +  +
Sbjct: 627 KLHDGEKISVLFREMKEKGVKPD----NVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  TY   I+ LCKSG++  A  L   +   ++  N  +YNC +D L
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFL 730



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 204/439 (46%), Gaps = 42/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ IL   L K    D  L +F R+   G+   +Y ++ LIN +C+         +
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++     P+A +++ LI GLC +  +  A  L  +        +V+T+ TLI+G C+
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A  LF++M + +    VV  PN VT+N +I+G C+ G V KA +L+ +M D  +
Sbjct: 488 DGNMDEAARLFDKMIDSS----VV--PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 285 NPDVVTYTSVIR-----------------------------------GFCYANDWNEAKR 309
            PD  TY S+I                                    GFC      E   
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           ++ EM  +GV+ D+++F+VI+    K    +K S L   M  +GV P+   +  +ID + 
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             + I  A   +  M ++GC  +VV+Y  LIN  CK+  +  A  L  EML     P   
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN     L    ++E+A K+          A+T T+N  I G CK+G +  A++L +  
Sbjct: 722 TYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 490 RDSKYELNIVSYNCLIDGL 508
            +S +  + +SY+ +I+ L
Sbjct: 781 TESGFFPDCISYSTIINEL 799



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 200/447 (44%), Gaps = 66/447 (14%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++ALC+FD M R       V  +N L     ++ ++     L   +   GL P   ++S 
Sbjct: 387 DDALCMFDRM-REKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSP 445

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI   C+ G ++    +   + R+  + N  TFT+LI G C +  + EAA LF K    +
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN---------GEFGVVCKP------- 251
             P+  T+N +I G CR G+   A  L+++M +               V+C         
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAK 565

Query: 252 -------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                        N+ +  T++ G CKEG + +   ++ +M+   +  D++++T ++   
Sbjct: 566 EFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAA 625

Query: 299 CYANDWNEAKRLFIEMMDQGVQPD-----------------------------------V 323
              +D  +   LF EM ++GV+PD                                   V
Sbjct: 626 LKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNV 685

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           VT++V+++ LCK+G +  A  L E M+     PN++TYN  +D      +++ A+ L  +
Sbjct: 686 VTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHAT 745

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           +   GC+ + V++NTLI  +CK   ++ A+ L       G  P  ++Y+T+   L ++  
Sbjct: 746 I-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGD 804

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFI 470
           + +A +L++EM    +  D   YN  I
Sbjct: 805 INKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 192/429 (44%), Gaps = 77/429 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +S++ L   L +     + + L + +   G+  ++YT + LI+ FCK G +     +
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++ S   PN VTF  +I+G C    + +A  L+ +       PD +TY +LI+ LC 
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL 557

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T   + A    +++ N           N+ +  T++ G CKEG + +   ++ +M+   +
Sbjct: 558 TLGAMKAKEFVDDLENN------CVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGV 611

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD---------------------- 322
             D++++T ++      +D  +   LF EM ++GV+PD                      
Sbjct: 612 KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALN 671

Query: 323 -------------VVTFSVIMDELCKNGKMDKASRLLELM-------------------- 349
                        VVT++V+++ LCK+G +  A  L E M                    
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731

Query: 350 --------------IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
                         I  G   NT T+NTLI G+C   +I  A  L  +   +G   D +S
Sbjct: 732 NEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEM 454
           Y+T+IN  CK  D+ +A  L++EML KG+KP +V YN L +    IH + ++ L ++ +M
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL-IRWCNIHGEFDKGLGIYSDM 850

Query: 455 RRNHVAADT 463
                A DT
Sbjct: 851 VNLKYADDT 859


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 227/439 (51%), Gaps = 26/439 (5%)

Query: 75  KSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCL--AKNKHYDTVLSLFKR 132
           K+SG GD        AL +F Y ++     P V  +N L   L       +  + ++++ 
Sbjct: 119 KNSGLGD-------RALKMF-YRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYEN 170

Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
           +   G+ P+++T+++L+   CK G++     +L  + +    P+ V++T+++  +C + R
Sbjct: 171 MRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGR 230

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + EA  +    R F  E  V   N LI GLCR G       L +EM  GNG       PN
Sbjct: 231 VEEAREV---ARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMV-GNG-----VDPN 281

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            V+Y+++I  L   G V+ A  +  KM      P+V T++S+++G+       E   L+ 
Sbjct: 282 VVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWR 341

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKA----SRLLELMIWRGVNPNTYTYNTLIDGY 368
            M+ +GV+P+VV ++ +++ LC +G + +A     R+ +    R   PN  TY+TL+ G+
Sbjct: 342 VMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCR---PNVTTYSTLVHGF 398

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
                +  A +++  M + G   +VV Y ++++  CKN   ++A  L   M + G  PTV
Sbjct: 399 VKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTV 458

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
           VT+NT   GL    +V  A+++ D+M+R     DT TYN  +DGL     + EA EL R 
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518

Query: 489 IRDSKYELNIVSYNCLIDG 507
           + + K ELN+V+YN ++ G
Sbjct: 519 LEERKVELNLVTYNTVMYG 537



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 201/402 (50%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           VS  N L   L +      V  L   +   G+ P++ ++S +I+    +G V     VLG
Sbjct: 247 VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLG 306

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +++R    PN  TF+SL+KG     R+ E   L+    +    P+V  YNTL+NGLC +G
Sbjct: 307 KMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSG 366

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A+++   M     E    C+PN  TY+T++ G  K G +  A E++ KM +  + P
Sbjct: 367 NLAEAVDVCGRM-----EKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP 421

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +VV YTS++   C  + +++A RL   M   G  P VVTF+  +  LC  G++  A R++
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M   G  P+T TYN L+DG    +++  A +L   +E      ++V+YNT++  +  +
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN-HVAADTYT 465
              E  L +   ML  G+KP  +T N +     ++ +V  A++  D +     +  D   
Sbjct: 542 GKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIA 601

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + + + G+C S  + EA+     + +     NI +++ L+ G
Sbjct: 602 HTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRG 643



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 189/403 (46%), Gaps = 12/403 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++++   L +N   D +  +  ++    +     +   ++N +   G       +  RI
Sbjct: 75  TYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRI 134

Query: 169 LRSCFTPNAVTFTSLIKGLCAES--RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
                 P    +  L+  L  ES  +     A++   R    EP+VFTYN L+  LC+ G
Sbjct: 135 KEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNG 194

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L  EM+         C P+ V+Y T++  +C++G V++A+E+  +   E +  
Sbjct: 195 KLDGACKLLVEMSKRG------CVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV-- 246

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
            V    ++I G C      E   L  EM+  GV P+VV++S ++  L   G+++ A  +L
Sbjct: 247 -VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVL 305

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             MI RG  PN +T+++L+ GY L  ++     L+  M   G   +VV YNTL+N  C +
Sbjct: 306 GKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCS 365

Query: 407 KDVEEALSLYSEMLSKGI-KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            ++ EA+ +   M      +P V TY+TL  G  +   ++ A +++++M    V  +   
Sbjct: 366 GNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVV 425

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y + +D LCK+    +A  L   +        +V++N  I GL
Sbjct: 426 YTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 176/367 (47%), Gaps = 9/367 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M+R     P V +F+ L             + L++ +   G+ P++  ++ L+
Sbjct: 301 ALAVLGKMIR-RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLL 359

Query: 150 NCFCKMGRVSHGFVVLGRILRSCF-TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           N  C  G ++    V GR+ + CF  PN  T+++L+ G      +  A+ ++ K      
Sbjct: 360 NGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGV 419

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+V  Y ++++ LC+      A  L + MA         C P  VT+NT I GLC  G 
Sbjct: 420 RPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDG------CPPTVVTFNTFIKGLCCGGR 473

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           V  A  +  +M+     PD  TY  ++ G    N+  EA  L  E+ ++ V+ ++VT++ 
Sbjct: 474 VLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNT 533

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           +M     +GK +   ++L  M+  GV P+  T N +I  Y    K+  A +    + +  
Sbjct: 534 VMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGK 593

Query: 389 CM-HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            +  D++++ +L+   C +  +EEA+   ++ML+KGI P + T++ L  G F+       
Sbjct: 594 ELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGP 653

Query: 448 LKLFDEM 454
           +++ D++
Sbjct: 654 IRILDDI 660


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 207/400 (51%), Gaps = 6/400 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L     +   +     L + + +   FP + T++ L+   CK  +V+   +    +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L+S FTP+ V+F SL+ G C    I EA  LF + +     P V TYNTLI+GLC  G+ 
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             AL L +EM +  G F     P+  TY  +++G  K G+V  A+  F +M  + + PD 
Sbjct: 407 DAALRLKKEMTD-QGLF-----PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y + I G     D + A  +  EM+  G  PDV+T++V +  LC+ G  ++A  LLE 
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G+ P+  TY ++I+G+     +  AR++F  M S G    VV+Y  LI+ +   + 
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           ++ A   +S+ML K +   V+TYN +  GL    +++ A K FDEM    +  + ++Y  
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            I+  C  G+  EAL L+R + D K + +  +++  +  L
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 11/430 (2%)

Query: 79  QGDINLITPNEALC--IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
            G ++++      C  +FD M+R +   P V + N +   L          +++  +   
Sbjct: 151 HGVVDVLIAGHVXCLLVFDKMIR-NGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIME 195
           G+ P + T++ +++ +CK GRV     +L  +  R C+ PN VT+  L+ GL  +  + +
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQ 268

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L  +          +TYN LING C+ G  + A +L EEM N          P   T
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA------FPTLST 322

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT++ GLCK   V   +  F  M      PD+V++ S++ G+C     +EA  LF E+ 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P V+T++ ++  LC  G +D A RL + M  +G+ P+ +TY  L++G      + 
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            AR  F  M S G   D  +YNT I    K  D   A S+  EML+ G  P V+TYN   
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             L +    E A  L + M  + +  D  TY + I+G  K+G + +A E+F  +      
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 496 LNIVSYNCLI 505
            ++V+Y  LI
Sbjct: 563 PSVVTYTVLI 572



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 178/385 (46%), Gaps = 32/385 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +S++N L   L K      V   F  +  +   PDI + + L+  +C+ G +S  F++
Sbjct: 318 PTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL 377

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P  +T+ +LI GLC    +  A  L  +       PD+FTY  L+NG  +
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 225 TGHTIVALNLFEEMANGN-------------GEFGVV----------------CKPNTVT 255
            G+  +A   F EM +               GE  +                   P+ +T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN  +  LC++G  ++A +L   M  + + PD VTYTS+I GF       +A+ +F EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +GV P VVT++V++        +D A      M+ + V  N  TYN +I+G C+T ++D
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A K F  ME  G + +  SY  LIN  C     EEAL LY EML + I+P   T++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 436 LGL---FEIHQVERALKLFDEMRRN 457
             L   +++H V+    L   +  N
Sbjct: 678 KNLHRDYQVHAVQCVESLIQNVEDN 702



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 146/278 (52%), Gaps = 5/278 (1%)

Query: 233 NLFEEMANGNG---EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
           NL  +  N  G   +FG+  KP  VTYNT++D  CKEG VD+A EL  +M++    P+ V
Sbjct: 194 NLLSKAKNVYGMMEQFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           TY  ++ G     +  +AK L  EM++ G+     T++ +++  C+ G   +A  L+E M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           + R   P   TYNTL+ G C   ++   R  F  M  +    D+VS+N+L+  YC+   +
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            EA  L+ E+  + + PTV+TYNTL  GL     ++ AL+L  EM    +  D +TY   
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++G  K G+V  A   F  +     + +  +YN  I G
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 125/234 (53%)

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           +F KM    + PDV     ++R     N  ++AK ++  M   G++P VVT++ ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G++D+A  LL  M  RG  PN  TYN L++G     +++ A+ L   M ++G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +YN LIN +C+     EA  L  EM+++   PT+ TYNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++    D  ++N+ + G C++G + EA  LF  ++       +++YN LI GL
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 8/220 (3%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V ++N+    L +  +++    L + + S GL PD  T++ +IN F K G +     
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V   +L     P+ VT+T LI    A+  +  A   F+K    +   +V TYN +INGLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            T     A   F+EM     E G++  PN  +Y  +I+  C  G+ ++A  L+ +M D  
Sbjct: 612 MTRRMDEAYKYFDEME----EKGIL--PNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           I PD  T++  ++      D+       +E + Q V+ ++
Sbjct: 666 IQPDSFTHSVFLKNL--HRDYQVHAVQCVESLIQNVEDNI 703



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%)

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L ++ +M+  G+ P V   N +   L + + + +A  ++  M +  +     TYN  +D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            CK G V +ALEL   +++     N V+YN L++GL
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGL 260


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 191/378 (50%), Gaps = 8/378 (2%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +  + D  + +F+ ++      D YT+S L++  C  GR+     +L  +      PN
Sbjct: 10  LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPN 69

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            V F  LI  LC +  +  A+ L     +  C P+  TYN+L++GLC  G    A++L  
Sbjct: 70  PVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
            M          C PN +T+ T++DG  K G       + + ++++    +  +Y+S+I 
Sbjct: 130 RMVANK------CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 183

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G           +L+ EM+++G +P+ + +S ++D LC+ GK D+A   L  M  +G  P
Sbjct: 184 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 243

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N++TY++L+ GY     I  A  ++  M  N C H  V Y+ LIN  CKN  ++EAL ++
Sbjct: 244 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 303

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTYTYNNFIDGLC 474
            +MLS+GIK  VV Y+++  G      VE+ +KLF++M      +  D  TYN  ++  C
Sbjct: 304 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 363

Query: 475 KSGFVLEALELFRAIRDS 492
               V  A+++   + D 
Sbjct: 364 TKNSVSRAIDILNTMLDQ 381



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M      P PV+ FN+L   L K         L   +   G  P+  T++ 
Sbjct: 52  DEAVSLLDEMQVEGTFPNPVA-FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNS 110

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  C  G++     +L R++ +   PN +TF +L+ G     R ++   +        
Sbjct: 111 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 170

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              + F+Y++LI+GL + G     + L++EM          CKPNT+ Y+ +IDGLC+EG
Sbjct: 171 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG------CKPNTIVYSALIDGLCREG 224

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+AKE  ++MK++   P+  TY+S++ G+  A D ++A  ++ EM D       V +S
Sbjct: 225 KPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYS 284

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--E 385
           ++++ LCKNGK+ +A  + + M+ RG+  +   Y+++I G+C    ++   KLF  M   
Sbjct: 285 ILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCH 344

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
           +     DVV+YN L+N +C    V  A+ + + ML +G  P  +T
Sbjct: 345 NPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 389



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 167/325 (51%), Gaps = 6/325 (1%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           ++  LC    + +A  +F       C  D +TY+TL++GLC  G    A++L +EM    
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVE 64

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
           G F     PN V +N +I  LCK+G + +A +L   M  +   P+ VTY S++ G C   
Sbjct: 65  GTF-----PNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKG 119

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
             ++A  L   M+     P+ +TF  ++D   K+G+     R+L  +  +G   N ++Y+
Sbjct: 120 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 179

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           +LI G     K +H  +L+  M   GC  + + Y+ LI+  C+    +EA     EM +K
Sbjct: 180 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P   TY++L  G FE   + +A+ ++ EM  N        Y+  I+GLCK+G + EA
Sbjct: 240 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 299

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
           L +++ +     +L++V+Y+ +I G
Sbjct: 300 LIVWKQMLSRGIKLDVVAYSSMIHG 324



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 9/324 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L      D  +SL  R+ +    P+  T   L++ F K GR   G  V
Sbjct: 103 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 162

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +    +  N  +++SLI GL  E +      L+ +     C+P+   Y+ LI+GLCR
Sbjct: 163 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 222

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A     EM N          PN+ TY++++ G  + G + KA  ++ +M D + 
Sbjct: 223 EGKPDEAKEYLIEMKNKGH------TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDC 276

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           N   V Y+ +I G C      EA  ++ +M+ +G++ DVV +S ++   C    +++  +
Sbjct: 277 NHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMK 336

Query: 345 LLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           L   M+     + P+  TYN L++ +C  + +  A  +  +M   GC  D ++ +  +  
Sbjct: 337 LFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKT 396

Query: 403 YCKNKD-VEEALSLYSEMLSKGIK 425
              N D  ++      E++ + IK
Sbjct: 397 LRDNMDPPQDGREFLDELVVRLIK 420


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  202 bits (514), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 129/422 (30%), Positives = 203/422 (48%), Gaps = 9/422 (2%)

Query: 89   EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSI 147
            +A+ IF Y ++     P   ++N +   L     Y+ V  L+  +++ G  FPD  T+S 
Sbjct: 1167 QAITIF-YQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSA 1225

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI+ FCK+GR      +L  +      P    +T LI      +    A +LF + R   
Sbjct: 1226 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C PDVFTY  LI GL + G    A + F EM          C+P+TV  N +I+ L K G
Sbjct: 1286 CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREG------CRPDTVFMNNMINFLGKAG 1339

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRG-FCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +D A +LF +M+     P VVTY ++I+  F   +  +E    F  M + G+ P   T+
Sbjct: 1340 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 1399

Query: 327  SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            S+++D  CK  +M+KA  LLE M  +G  P    Y +LID      + D A +LF  ++ 
Sbjct: 1400 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 1459

Query: 387  NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            N        Y  +I    K   +++A++++ EM   G  P V  YN L  GL     ++ 
Sbjct: 1460 NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 1519

Query: 447  ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            AL     M+ +    D  +YN  ++GL K+G    A+E+   ++ S    ++VSYN ++ 
Sbjct: 1520 ALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLG 1579

Query: 507  GL 508
             L
Sbjct: 1580 AL 1581



 Score =  148 bits (373), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 11/356 (3%)

Query: 141  DIYTHSILINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAA 197
            D  T+  LI+C   + +    + ++  ++R+     TP  ++   +++ L     + +A 
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELS--DVVRMLGNAKMVRQAI 1169

Query: 198  ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
             +F + +   C+P    YN++I  L   G       L+ EM+         C P+TVTY+
Sbjct: 1170 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGH-----CFPDTVTYS 1224

Query: 258  TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
             +I   CK G  D A +L  +MK+  + P    YT +I  F   ND + A  LF EM  Q
Sbjct: 1225 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 1284

Query: 318  GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
              +PDV T++ ++  L K G++D+A      M   G  P+T   N +I+      ++D A
Sbjct: 1285 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 1344

Query: 378  RKLFVSMESNGCMHDVVSYNTLINWYCKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             KLF  ME+  C+  VV+YNT+I    ++K    E  S +  M   GI P+  TY+ L  
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404

Query: 437  GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            G  + +++E+A+ L +EM           Y + ID L K+     A ELF+ ++++
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 1460



 Score =  125 bits (314), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 88/291 (30%), Positives = 139/291 (47%), Gaps = 50/291 (17%)

Query: 88   NEALCIFDYM--LRMHPSPPPVSSFNILFGCLAKNKHYDT-VLSLFKRLNSAGLFPDIYT 144
            ++A+ +F  M  LR  PS   V ++N +   L ++K   + V S F+R+  +G+ P  +T
Sbjct: 1342 DDAMKLFQEMETLRCIPS---VVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 1398

Query: 145  HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL----------------- 187
            +SILI+ FCK  R+    ++L  +    F P    + SLI  L                 
Sbjct: 1399 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 1458

Query: 188  --CAES----------------RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
              C  S                R+ +A  +F +     C PDV+ YN L++GL RTG   
Sbjct: 1459 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 1518

Query: 230  VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             AL+    M     E G  C P+  +YN I++GL K G   +A E+   MK   + PDVV
Sbjct: 1519 EALSTMRRMQ----EHG--CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVV 1572

Query: 290  TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            +Y +V+    +A  + EA +L  EM   G + D++T+S I++ +   GK+D
Sbjct: 1573 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI---GKVD 1620



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 6/233 (2%)

Query: 280  KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--ELCKNG 337
            K  N   D  TY ++I        + E  ++  EM+   +   VVT + + D   +  N 
Sbjct: 1105 KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSDVVRMLGNA 1162

Query: 338  KM-DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVVS 395
            KM  +A  +   +  R   P    YN++I       + +   +L+  M + G C  D V+
Sbjct: 1163 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 1222

Query: 396  YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
            Y+ LI+ +CK    + A+ L +EM   G++PT   Y  L    F+ +    AL LF+EMR
Sbjct: 1223 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 1282

Query: 456  RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              +   D +TY   I GL K+G + EA   F  ++      + V  N +I+ L
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL 1335


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 187/364 (51%), Gaps = 14/364 (3%)

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
           +++LI  +C  G V     VL  +     +PN + + ++++ LC   ++ +   +  +  
Sbjct: 196 NNVLIGGYCXSGEVEEALRVLDCM---SVSPNGINYDTILRSLCDRCKLKQGMEVLDRQL 252

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C PDV TY  LI+  C+      A+ L  EM +        CKPN VTYN +I G+C
Sbjct: 253 QIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKE------CKPNVVTYNALIKGIC 306

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            EG +D+       +      PDV++YT V+        W +A +L   M+ +G   +VV
Sbjct: 307 NEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVV 366

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           TF+ +++ LC+ G + KA  +LE++      PN+ +YN  I G+C     +        M
Sbjct: 367 TFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEIM 421

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
            S GC  D+V+YN L+   CK++ V++A+ +  ++  KG+KP V+TY+ +  GL ++ + 
Sbjct: 422 VSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKT 481

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           + AL+L +E     +  +  T+ + + G+ + G V EA+++F  +       N  +YN +
Sbjct: 482 DLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLI 541

Query: 505 IDGL 508
           I GL
Sbjct: 542 IMGL 545



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 22/351 (6%)

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
           +PD+ T++ LI+  CK  RV     +L  ++     PN VT+ +LIKG+C E R+ E   
Sbjct: 257 YPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIR 316

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
                  +  +PDV +Y  +++ L   G    A+ L   M          C  N VT+NT
Sbjct: 317 FLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKG------CSLNVVTFNT 370

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I+ LC++G + KA  +   +      P+ ++Y   I GFC     NE       M+ +G
Sbjct: 371 LINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEIMVSRG 425

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             PD+VT+++++  LCK+ K+D A  +L+ + ++G+ P+  TY+ +IDG     K D A 
Sbjct: 426 CYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLAL 485

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L     + G   +++++ +++    +   V EA+ ++  +   GI+P    YN + +GL
Sbjct: 486 ELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGL 545

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            +  Q  R  K  +            TYN  + G+   G   EA +L+  +
Sbjct: 546 CKTQQTSRGCKPTEA-----------TYNILVKGITSEGXPKEASKLWSEL 585



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 24/351 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K+      + L   + S    P++ T++ LI   C  GR+      
Sbjct: 258 PDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRF 317

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +    + P+ +++T ++  L +  R  +A  L        C  +V T+NTLIN LC+
Sbjct: 318 LKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQ 377

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK-MKDEN 283
            G    A N+ E +         VC PN+++YN  I G C E      K  +L+ M    
Sbjct: 378 KGLLGKAFNVLEMIXKH------VCTPNSISYNPSIGGFCNE------KSXYLEIMVSRG 425

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD+VTY  ++   C     ++A  +  ++  +G++PDV+T+S+I+D L K GK D A 
Sbjct: 426 CYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLAL 485

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LLE    +G+ PN  T+ +++ G     K+  A K+F  +E  G   +  +YN +I   
Sbjct: 486 ELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGL 545

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           CK           ++  S+G KPT  TYN L  G+      + A KL+ E+
Sbjct: 546 CK-----------TQQTSRGCKPTEATYNILVKGITSEGXPKEASKLWSEL 585



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 23/326 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L   +      D V+   K L S G  PD+ +++I+++     GR +    +
Sbjct: 293 PNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKL 352

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L    + N VTF +LI  LC +  + +A  +        C P+  +YN  I G C 
Sbjct: 353 LASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCN 412

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                   + + E+    G     C P+ VTYN ++  LCK+  VD A E+  ++  + +
Sbjct: 413 EK------SXYLEIMVSRG-----CYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGL 461

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PDV+TY+ +I G       + A  L  E   +G++P+++TF+ ++  + + GK+ +A +
Sbjct: 462 KPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIK 521

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   +   G+ PN + YN +I G C T +            S GC     +YN L+    
Sbjct: 522 IFHFLEGLGIRPNAFAYNLIIMGLCKTQQT-----------SRGCKPTEATYNILVKGIT 570

Query: 405 KNKDVEEALSLYSEMLSKG-IKPTVV 429
                +EA  L+SE+ SKG +K ++V
Sbjct: 571 SEGXPKEASKLWSELYSKGPVKKSLV 596


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 204/419 (48%), Gaps = 8/419 (1%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P +AL   + M+      P  ++FN L   L K+  ++    +F       +  D+Y+  
Sbjct: 98  PEQALFYXNQMIG-RGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFG 155

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           I+I   C++G +  GF VLG++     +PN V +T+LI G C    I     LF K    
Sbjct: 156 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 215

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
               + +TY  LING  + G     + L+E+M       G+V  PN  TYN++I   C +
Sbjct: 216 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCND 269

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G ++ A ELF +M++  +  +VVTY ++I G C      EA+RL   M   G+ P+++++
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 329

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D  C  G +DKAS L   M   G +P+  TYN LI G+           +   ME+
Sbjct: 330 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 389

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G     V+Y  L++   ++ ++E+A  +YS M   G+   +  Y  L  GL  +  ++ 
Sbjct: 390 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 449

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           A KLF  +   H+  +   YN  I G CK G    AL L + + ++    N+ SYN  I
Sbjct: 450 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 49/419 (11%)

Query: 129 LFKRLNSAGL--FP-DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
           LF  L    L  FP  +  H  +IN   +            +++     P + TF +L+ 
Sbjct: 66  LFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLI 125

Query: 186 GLCAESRIMEAAALF--TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
            L   +   +A  +F  TK  V   + DV+++  +I G C  G+      +  +M     
Sbjct: 126 LLIKSNFFEKAWRVFNETKGNV---KLDVYSFGIMIKGCCEVGYLDKGFEVLGQME---- 178

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           E G+   PN V Y T+IDG CK G +++ K+LF KM + ++  +  TYT +I GF     
Sbjct: 179 EMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGL 236

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             +   L+ +M   G+ P+V T++ ++   C +GK++ A  L + M  RGV  N  TYNT
Sbjct: 237 KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNT 296

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G C   ++  A +L   M+ +G   +++SYNTLI+ YC   ++++A SL+++M S G
Sbjct: 297 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 356

Query: 424 IKPTVVTYNTLFLGLFEIH-----------------------------------QVERAL 448
             P++ TYN L  G  E                                      +E+A 
Sbjct: 357 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 416

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +++  M +  + AD Y Y   I GLC  G + EA +LF+++ +   + N V YN +I G
Sbjct: 417 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYG 475



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 173/383 (45%), Gaps = 42/383 (10%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +   M  M  SP  V    ++ GC  KN   +    LF ++    +  + YT+++LIN F
Sbjct: 173 VLGQMEEMGLSPNVVVYTTLIDGC-CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGF 231

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            KMG    G  +  ++  +   PN  T+ S+I   C + ++  A  LF + R      +V
Sbjct: 232 FKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNV 291

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNTLI GLC+    + A  L   M            PN ++YNT+IDG C  G +DKA
Sbjct: 292 VTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIGNLDKA 345

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             LF +MK    +P + TY  +I GF  A +      +  EM  +G+ P  VT++++MD 
Sbjct: 346 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 405

Query: 333 L-----------------------------------CKNGKMDKASRLLELMIWRGVNPN 357
           L                                   C  G M +AS+L + +    + PN
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 465

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
              YNT+I GYC       A +L   M  NG + +V SYN+ I   CK++   EA  L  
Sbjct: 466 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLK 525

Query: 418 EMLSKGIKPTVVTYNTLFLGLFE 440
           +M+  G+KP++  +N +    F+
Sbjct: 526 DMIELGLKPSISIWNMISKARFD 548


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 199/430 (46%), Gaps = 30/430 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++ NIL   L +   +      F  +   G+ PD+Y  +  IN FCK G+V     +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++  +   PN VTF ++I GL    R  EA     K      EP + TY+ L+ GL R
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTV-----------------------------T 255
                 A  + +EM        V+   N +                             T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I G CK G  D A+ L  +M     N +  ++TSVI   C    ++ A R   EM+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P     + ++  LCK+GK  KA  L    + +G   +T T N L+ G C   K+D
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A ++   +   GC+ D VSYNTLI+  C  K ++EA     EM+ +G+KP   TY+ L 
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GLF +++VE A++ +D+ +RN +  D YTY+  IDG CK+    E  E F  +     +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642

Query: 496 LNIVSYNCLI 505
            N V YN LI
Sbjct: 643 PNTVVYNHLI 652



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 206/448 (45%), Gaps = 30/448 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M     +P  V +FN +   L     YD      +++   G+ P + T+SIL
Sbjct: 278 EAVKLFSKMEEAGVAPN-VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +    +  R+   + VL  + +  F PN + + +LI        + +A  +         
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEF-GVVC------------- 249
                TYNTLI G C+ G    A  L +EM +       G F  V+C             
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456

Query: 250 ----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P      T+I GLCK G   KA EL+ +  ++    D  T  +++ G C
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A   +EA R+  E++ +G   D V+++ ++   C   K+D+A   L+ M+ RG+ P+ Y
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TY+ LI G    +K++ A + +   + NG + DV +Y+ +I+  CK +  EE    + EM
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           +SK ++P  V YN L        ++  AL+L ++M+   ++ ++ TY + I G+     V
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDG 507
            EA  LF  +R    E N+  Y  LIDG
Sbjct: 697 EEAKLLFEEMRMEGLEPNVFHYTALIDG 724



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 185/399 (46%), Gaps = 9/399 (2%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            SF  +   L  +  +D+ L     +    + P     + LI+  CK G+ S    +  +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            L   F  +  T  +L+ GLC   ++ EA  +  +     C  D  +YNTLI+G C    
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A    +EM           KP+  TY+ +I GL     V++A + +   K   + PD
Sbjct: 556 LDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V TY+ +I G C A    E +  F EMM + VQP+ V ++ ++   C++G++  A  L E
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G++PN+ TY +LI G  +  +++ A+ LF  M   G   +V  Y  LI+ Y K  
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +   L  EM SK + P  +TY  +  G      V  A +L +EMR   +  D+ TY 
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            FI G  K G VLEA   F+   +  Y   I  +N LI 
Sbjct: 790 EFIYGYLKQGGVLEA---FKGSDEENYAAIIEGWNKLIQ 825



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 149/302 (49%), Gaps = 13/302 (4%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKE 266
           P   T N L+  L R        N F++       F VVCK   P+   + T I+  CK 
Sbjct: 224 PSKTTCNILLTSLVRA-------NEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKG 273

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V++A +LF KM++  + P+VVT+ +VI G      ++EA     +M+++G++P ++T+
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++  L +  ++  A  +L+ M  +G  PN   YN LID +     ++ A ++   M S
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G      +YNTLI  YCKN   + A  L  EMLS G      ++ ++   L      + 
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+   EM   +++         I GLCK G   +ALEL+    +  + ++  + N L+ 
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513

Query: 507 GL 508
           GL
Sbjct: 514 GL 515



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)

Query: 397 NTLINWYC---KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + LI  YC   K      AL ++  + +KG+ P+  T N L   L   ++ ++  + FD 
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  V+ D Y +   I+  CK G V EA++LF  + ++    N+V++N +IDGL
Sbjct: 252 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 305



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M RM    P V  +  L     K      V  L + ++S  + P+  T++++
Sbjct: 698 EAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 756

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           I  + + G V+    +L  +      P+++T+   I G   +  ++EA
Sbjct: 757 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 230/505 (45%), Gaps = 17/505 (3%)

Query: 5   SSTRSFHFTSISISALRCNF--SSSFPHTRKPTSSISENEPSYP--TTTSKLKESLRLTV 60
           S  + F  T  SIS L  +       PH +     I  N+ S P  T  S L     LT 
Sbjct: 28  SIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLH---HLTQ 84

Query: 61  KDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKN 120
               S+   L      +      L+  ++AL  F+ M+       P + FN L G L ++
Sbjct: 85  NQNPSMTTALLYESIINAHLKSQLL--DKALIFFNEMVDKGLVFRP-NIFNSLLGSLVRS 141

Query: 121 KHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF 180
             ++     F  L     F D+Y+  I+I   C+ G +   F +LG +     +PN V +
Sbjct: 142 NCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIY 200

Query: 181 TSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 240
           T+LI G C    I  A   F K        + +T+  LINGL + G      +LFE+M  
Sbjct: 201 TTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKI 260

Query: 241 GNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
            NG F     PN  TYN +++  C EG + +A +LF +M++  +  +VVTY ++I G C 
Sbjct: 261 -NGLF-----PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCR 314

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYT 360
                EA++L  +M    V P+++T++ ++   C  G +DKAS LL+ +   G++P+  T
Sbjct: 315 EERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVT 374

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN LI+GY           L   ME  G     V+   LI+ Y + +++E+A  +YS M 
Sbjct: 375 YNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSME 434

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G+ P V  Y  L  GL     ++ + KLF  M   HV      YN  I G CK     
Sbjct: 435 KFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSY 494

Query: 481 EALELFRAIRDSKYELNIVSYNCLI 505
            AL L R +       N+ SY+ +I
Sbjct: 495 RALRLLREMEAKGLVPNVASYSSII 519



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 195/376 (51%), Gaps = 6/376 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V SF I+     +N + D    L   L   GL P++  ++ LI+  CK G +    +   
Sbjct: 162 VYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFD 221

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++       N  TFT LI GL  +    +   LF K ++    P+++TYN L+N  C  G
Sbjct: 222 KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A +LF+EM     E GV  + N VTYNT+I G+C+E  V +A++L  +MK   ++P
Sbjct: 282 KICRAFDLFDEMR----ERGV--EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +++TY ++I GFC   + ++A  L  ++   G+ P +VT++++++   K G     + L 
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  RG++P+  T   LID Y    +++ A +++ SME  G + DV  Y  LI+  C  
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            +++E+  L+  M    ++P+ V YNT+  G  +     RAL+L  EM    +  +  +Y
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASY 515

Query: 467 NNFIDGLCKSGFVLEA 482
           ++ I  LCK G   EA
Sbjct: 516 SSIIGVLCKDGKWEEA 531



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 181/359 (50%), Gaps = 15/359 (4%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           M  SP  V    ++ GC  KN   +     F ++   GL  + YT ++LIN   K G   
Sbjct: 191 MGLSPNVVIYTTLIDGC-CKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
            GF +  ++  +   PN  T+  L+   C E +I  A  LF + R    E +V TYNTLI
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLI 309

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
            G+CR      A  L ++M            PN +TYNT+I G C  G +DKA  L  ++
Sbjct: 310 GGMCREERVWEAEKLVDQMKKA------AVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           K   ++P +VTY  +I G+  A +W     L  EM  +G+ P  VT +V++D   +  +M
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH----DVVS 395
           +KA ++   M   G+ P+ Y Y  LI G C+   +  + KLF SM   G MH    DV+ 
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM---GEMHVEPSDVI- 479

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           YNT+I+ YCK  +   AL L  EM +KG+ P V +Y+++   L +  + E A  L D+M
Sbjct: 480 YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 169/326 (51%), Gaps = 6/326 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +F +L   L K         LF+++   GLFP++YT++ L+N +C  G++   F +   +
Sbjct: 234 TFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM 293

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N VT+ +LI G+C E R+ EA  L  + +  A  P++ TYNTLI G C  G+ 
Sbjct: 294 RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNL 353

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A +L +++ + NG       P+ VTYN +I+G  K G      +L  +M+   I+P  
Sbjct: 354 DKASSLLDQLKS-NG-----LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSK 407

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VT T +I  +    +  +A +++  M   G+ PDV  + V++  LC  G M ++S+L   
Sbjct: 408 VTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRS 467

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M    V P+   YNT+I GYC  D    A +L   ME+ G + +V SY+++I   CK+  
Sbjct: 468 MGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTL 434
            EEA  L  +M+   +KP+    N +
Sbjct: 528 WEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 173/329 (52%), Gaps = 6/329 (1%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           +F  +IKG C    + ++  L    +     P+V  Y TLI+G C+ G    A   F++M
Sbjct: 164 SFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKM 223

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
               GE G+V   N  T+  +I+GL K+G      +LF KMK   + P++ TY  ++  +
Sbjct: 224 ----GEMGLVA--NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C       A  LF EM ++GV+ +VVT++ ++  +C+  ++ +A +L++ M    V+PN 
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTLI G+C    +D A  L   ++SNG    +V+YN LI  Y K  + +    L  E
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M  +GI P+ VT   L      + ++E+A +++  M +  +  D Y Y   I GLC  G 
Sbjct: 398 MEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN 457

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + E+ +LFR++ +   E + V YN +I G
Sbjct: 458 MKESSKLFRSMGEMHVEPSDVIYNTMIHG 486



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 10/211 (4%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           L+ +   P + ++NIL    +K  ++  V  L + +   G+ P   T ++LI+ + ++  
Sbjct: 363 LKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQE 422

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   F +   + +    P+   +  LI GLC +  + E++ LF        EP    YNT
Sbjct: 423 MEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           +I+G C+  ++  AL L  EM       G+V  PN  +Y++II  LCK+G  ++A+ L  
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAK----GLV--PNVASYSSIIGVLCKDGKWEEAEVLLD 536

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           KM +  + P      S++     A ++ E K
Sbjct: 537 KMIELQLKPS----ASILNMISKAKNFTELK 563



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 19/204 (9%)

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           +A  LF   + QG Q    + S ++  L  + K+  A  L+  ++   ++   +T  +L+
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI- 424
                           ++   N  M   + Y ++IN + K++ +++AL  ++EM+ KG+ 
Sbjct: 80  H--------------HLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 425 -KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +P +  +N+L   L   +  E+A   F+E++   V  D Y++   I G C++G + ++ 
Sbjct: 126 FRPNI--FNSLLGSLVRSNCFEKAWLFFNELKE-RVKFDVYSFGIMIKGCCENGNLDKSF 182

Query: 484 ELFRAIRDSKYELNIVSYNCLIDG 507
           +L   ++D     N+V Y  LIDG
Sbjct: 183 QLLGLLQDMGLSPNVVIYTTLIDG 206


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 199/430 (46%), Gaps = 30/430 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++ NIL   L +   +      F  +   G+ PD+Y  +  IN FCK G+V     +
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 295

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++  +   PN VTF ++I GL    R  EA     K      EP + TY+ L+ GL R
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTV-----------------------------T 255
                 A  + +EM        V+   N +                             T
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 415

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I G CK G  D A+ L  +M     N +  ++TSVI   C    ++ A R   EM+
Sbjct: 416 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 475

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P     + ++  LCK+GK  KA  L    + +G   +T T N L+ G C   K+D
Sbjct: 476 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 535

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A ++   +   GC+ D VSYNTLI+  C  K ++EA     EM+ +G+KP   TY+ L 
Sbjct: 536 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 595

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GLF +++VE A++ +D+ +RN +  D YTY+  IDG CK+    E  E F  +     +
Sbjct: 596 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 655

Query: 496 LNIVSYNCLI 505
            N V YN LI
Sbjct: 656 PNTVVYNHLI 665



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 206/448 (45%), Gaps = 30/448 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M     +P  V +FN +   L     YD      +++   G+ P + T+SIL
Sbjct: 291 EAVKLFSKMEEAGVAPN-VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +    +  R+   + VL  + +  F PN + + +LI        + +A  +         
Sbjct: 350 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEF-GVVC------------- 249
                TYNTLI G C+ G    A  L +EM +       G F  V+C             
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469

Query: 250 ----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P      T+I GLCK G   KA EL+ +  ++    D  T  +++ G C
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A   +EA R+  E++ +G   D V+++ ++   C   K+D+A   L+ M+ RG+ P+ Y
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TY+ LI G    +K++ A + +   + NG + DV +Y+ +I+  CK +  EE    + EM
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           +SK ++P  V YN L        ++  AL+L ++M+   ++ ++ TY + I G+     V
Sbjct: 650 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 709

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDG 507
            EA  LF  +R    E N+  Y  LIDG
Sbjct: 710 EEAKLLFEEMRMEGLEPNVFHYTALIDG 737



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 185/399 (46%), Gaps = 9/399 (2%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            SF  +   L  +  +D+ L     +    + P     + LI+  CK G+ S    +  +
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 508

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            L   F  +  T  +L+ GLC   ++ EA  +  +     C  D  +YNTLI+G C    
Sbjct: 509 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 568

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A    +EM           KP+  TY+ +I GL     V++A + +   K   + PD
Sbjct: 569 LDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V TY+ +I G C A    E +  F EMM + VQP+ V ++ ++   C++G++  A  L E
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G++PN+ TY +LI G  +  +++ A+ LF  M   G   +V  Y  LI+ Y K  
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +   L  EM SK + P  +TY  +  G      V  A +L +EMR   +  D+ TY 
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            FI G  K G VLEA   F+   +  Y   I  +N LI 
Sbjct: 803 EFIYGYLKQGGVLEA---FKGSDEENYAAIIEGWNKLIQ 838



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 149/302 (49%), Gaps = 13/302 (4%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKE 266
           P   T N L+  L R        N F++       F VVCK   P+   + T I+  CK 
Sbjct: 237 PSKTTCNILLTSLVRA-------NEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKG 286

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V++A +LF KM++  + P+VVT+ +VI G      ++EA     +M+++G++P ++T+
Sbjct: 287 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 346

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++  L +  ++  A  +L+ M  +G  PN   YN LID +     ++ A ++   M S
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G      +YNTLI  YCKN   + A  L  EMLS G      ++ ++   L      + 
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 466

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+   EM   +++         I GLCK G   +ALEL+    +  + ++  + N L+ 
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526

Query: 507 GL 508
           GL
Sbjct: 527 GL 528



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)

Query: 397 NTLINWYC---KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + LI  YC   K      AL ++  + +KG+ P+  T N L   L   ++ ++  + FD 
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 264

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  V+ D Y +   I+  CK G V EA++LF  + ++    N+V++N +IDGL
Sbjct: 265 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 318



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M RM    P V  +  L     K      V  L + ++S  + P+  T++++
Sbjct: 711 EAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 769

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           I  + + G V+    +L  +      P+++T+   I G   +  ++EA
Sbjct: 770 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 197/395 (49%), Gaps = 28/395 (7%)

Query: 104 PPPVSSFNILFGCLAKNKHYDT--VLSLFKRLNSAGLFPDIYTHSI----LINCFCKMGR 157
           PP    +NI  G +   +   +  +L L +++    L  +   + +       C C +G+
Sbjct: 378 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 437

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
               F ++  ++R  F P+  T++ +I  LC  +++ +A  LF + ++    PDV+TY  
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI+  C+ G    A  LFEEM +      V C P  VTY  +I    K   V +A ++F 
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRS------VGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG----------------VQP 321
           +M D    P+ VTY +++ G C A + ++A  ++ +++                   + P
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 611

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +VVT+  ++D LCK  K+D A  LL+ M+  G  PN   Y+ LIDG+C   KID A+++F
Sbjct: 612 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + M   G +  V +Y +LI+   K+  ++ A+ + S+ML     P VVTY  +  GL  I
Sbjct: 672 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 731

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            + E+ALKL   M     + +  TY   IDGL +S
Sbjct: 732 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 207/438 (47%), Gaps = 29/438 (6%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           I + M+    +P P S FN L       K Y     L  R+ + G  P    ++I I   
Sbjct: 333 IINMMMTEGCNPNP-SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 391

Query: 153 CKMGRVSHGFV------VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           C   ++    +      + G +L +    N V   +  + LC   +  +A  L  +    
Sbjct: 392 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 451

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PD  TY+ +I  LC       A  LF+EM        V   P+  TY  +ID  CK 
Sbjct: 452 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM------VGVTPDVYTYTILIDSFCKA 505

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G +++A+ LF +M+    +P VVTYT++I  +  A    +A  +F  M+D G +P+ VT+
Sbjct: 506 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 565

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRG----------------VNPNTYTYNTLIDGYCL 370
             ++D LCK G + KA  +   +I                   + PN  TY  L+DG C 
Sbjct: 566 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 625

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K+DHA +L  +M S+GC  + + Y+ LI+ +CK   ++ A  ++ +M   G  P+V T
Sbjct: 626 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 685

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           Y +L   +F+  +++ A+K+  +M ++    +  TY   IDGLC+ G   +AL+L   + 
Sbjct: 686 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 745

Query: 491 DSKYELNIVSYNCLIDGL 508
           +     N+V+Y  LIDGL
Sbjct: 746 EKGCSPNVVTYTALIDGL 763



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 181/407 (44%), Gaps = 18/407 (4%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
           L +  ++D  +S   R+      P++ T+  L++ F K  ++     ++  ++     PN
Sbjct: 286 LMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 345

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
              F SL+   C E     A  L  +     C P    YN  I  +C     + + +L +
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLD 404

Query: 237 EMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                 GE     C  N V        LC  G  DKA +L  +M  +   PD  TY+ VI
Sbjct: 405 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 464

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
              C+A    +A  LF EM   GV PDV T+++++D  CK G +++A  L E M   G +
Sbjct: 465 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 524

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P   TY  LI  Y    ++  A  +F  M   GC  + V+Y  L++  CK  ++ +A  +
Sbjct: 525 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 584

Query: 416 YSEMLSKG----------------IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           Y++++                   + P VVTY  L  GL + H+V+ A +L D M  +  
Sbjct: 585 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 644

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
             +   Y+  IDG CK+G +  A E+F  +    Y  ++ +Y  LID
Sbjct: 645 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLID 691



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 201/455 (44%), Gaps = 54/455 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L   L+     D    + K ++ +G   D +T     +  CK GR +     
Sbjct: 207 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA--- 263

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  I R  F  + V  T +I GL   S   EA +   + R  +C P+V TY TL++G  +
Sbjct: 264 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 323

Query: 225 TGH-----TIVAL----------NLFEEMANG--------------NGEFGVVCKPNTVT 255
                    I+ +          +LF  + +               N      C P  V 
Sbjct: 324 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 383

Query: 256 YNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           YN  I  +C +        +D A++++ +M   N   + V   +  R  C    +++A +
Sbjct: 384 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 443

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EMM +G  PD  T+S ++  LC   K++KA  L + M   GV P+ YTY  LID +C
Sbjct: 444 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 503

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               I+ A+ LF  M S GC   VV+Y  LI+ Y K K V +A  ++  M+  G +P  V
Sbjct: 504 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 563

Query: 430 TYNTLFLGLFEIHQVERALKLFDEM----------------RRNHVAADTYTYNNFIDGL 473
           TY  L  GL +   + +A +++ ++                 R+ +A +  TY   +DGL
Sbjct: 564 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 623

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           CK+  V  A EL  A+  S  E N + Y+ LIDG 
Sbjct: 624 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 149/383 (38%), Gaps = 61/383 (15%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VLGR+L             L++  C      EA     + + F   P   TYN L+  L 
Sbjct: 172 VLGRLL-----------NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLS 220

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             G   +   + +EM+         C  +  T       LCKEG    A ++   ++ E+
Sbjct: 221 SAGQVDLGFRVQKEMSESG-----FCM-DRFTVGCFAHALCKEGRWADALDM---IERED 271

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D V  T +I G   A+ ++EA      M      P+VVT+  ++    K  ++    
Sbjct: 272 FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK 331

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R++ +M+  G NPN   +N+L+  YC      +A KL   M + GC    V YN  I   
Sbjct: 332 RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 391

Query: 404 CKNKDV-----------------------------------------EEALSLYSEMLSK 422
           C  + +                                         ++A  L  EM+ K
Sbjct: 392 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 451

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P   TY+ +   L    +VE+A  LF EM+   V  D YTY   ID  CK+G + +A
Sbjct: 452 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 511

Query: 483 LELFRAIRDSKYELNIVSYNCLI 505
             LF  +R       +V+Y  LI
Sbjct: 512 QWLFEEMRSVGCSPTVVTYTALI 534



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 11/254 (4%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y+ + D L  +G    A+ L  ++ +E+          ++R  C    WNEA      + 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC----LT 371
           D G +P  VT++ ++  L   G++D   R+ + M   G   + +T        C      
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
           D +D   +    +++  C H       +I+   +    +EA+S    M      P VVTY
Sbjct: 262 DALDMIEREDFKLDTVLCTH-------MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 314

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
            TL  G  +  Q+    ++ + M       +   +N+ +   C       A +L   +  
Sbjct: 315 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 374

Query: 492 SKYELNIVSYNCLI 505
                  V YN  I
Sbjct: 375 CGCPPGYVVYNIFI 388


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 233/495 (47%), Gaps = 81/495 (16%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A C+F  M+      P +   N +   L K K  D   S+ +++  +G+ PD++T+S+
Sbjct: 227 DKAHCLFLEMME-QGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL-----IKGLCAES----------- 191
           +I+  CK   +     VL +++ +   PN++T+ SL     I G+  ES           
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 192 -------------------RIMEAAALFTKHRVFACEPDVFTYNT--------------- 217
                              R  EA  +F    +   +PD+ +Y+T               
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWV 405

Query: 218 -----------------------LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 254
                                  LIN   R G    A+ +FE+M N     G++  P+TV
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTV 459

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           T+ T+I  LC+ G +D A   F  M D  + P    Y  +I+G C   +  +AK L  EM
Sbjct: 460 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 519

Query: 315 MDQGVQPDVVT-FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M++ + P  V  FS I++ LCK G++ +   ++++M+  G  PN  T+N+L++GYCL   
Sbjct: 520 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 579

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           ++ A  L  +M S G   +   Y TL++ YCKN  +++AL+++ +ML KG+KPT V Y+ 
Sbjct: 580 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 639

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  GLF+  +   A K+F EM  +      +TY   + GLC++    EA  L   +    
Sbjct: 640 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 699

Query: 494 YELNIVSYNCLIDGL 508
            + +I+++N +I  +
Sbjct: 700 VKFDIITFNIVISAM 714



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 15/413 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVS-SFNILFGCLAKNKHYDTVL-----SLFKRLNSAGLFPD 141
           NEA CIFD M+   P P  +S S N  + C      Y TV+     ++F  + + G+ P+
Sbjct: 367 NEAKCIFDSMVLKGPKPDIISYSTNASWVCY----WYVTVVWVMWHNIFNLMLTKGIAPN 422

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
            +  +ILIN + + G +    ++   +      P+ VTF ++I  LC   R+ +A   F 
Sbjct: 423 KHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 482

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
                   P    Y  LI G C  G  + A  L  EM N +     +  P    +++II+
Sbjct: 483 HMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIIN 537

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
            LCKEG V + K++   M      P+VVT+ S++ G+C   +  EA  L   M   G++P
Sbjct: 538 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 597

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           +   +  ++D  CKNG++D A  +   M+ +GV P +  Y+ ++ G     +   A+K+F
Sbjct: 598 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 657

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
             M  +G    + +Y  ++   C+N   +EA  L  ++ +  +K  ++T+N +   +F++
Sbjct: 658 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 717

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
            + + A +LFD +    +  +  TY+  I  L K     EA  LF ++  S +
Sbjct: 718 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 770



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 206/429 (48%), Gaps = 14/429 (3%)

Query: 86  TPNEALCIFDYMLRM---HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
            P  A+ +F  M R      SPP + ++NIL  C  +    D  L++  RL   GL PD 
Sbjct: 152 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD 211

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           +++S LI  F K G V     +   ++     P  +   S+IK LC    + +A ++  K
Sbjct: 212 FSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                  PD+FTY+ +I+GLC++     A  + E+M           +PN++TYN++I G
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSITYNSLIHG 324

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
               G  +++  +F +M    + P V    S I         NEAK +F  M+ +G +PD
Sbjct: 325 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384

Query: 323 VVTFSVIMDELCK---NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
           ++++S     +C             +  LM+ +G+ PN + +N LI+ Y     +D A  
Sbjct: 385 IISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAML 444

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +F  M++ G + D V++ T+I+  C+   +++AL  ++ M+  G+ P+   Y  L  G  
Sbjct: 445 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 504

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTY-NNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
              ++ +A +L  EM    +      Y ++ I+ LCK G V E  ++   +  +    N+
Sbjct: 505 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNV 564

Query: 499 VSYNCLIDG 507
           V++N L++G
Sbjct: 565 VTFNSLMEG 573


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 206/424 (48%), Gaps = 25/424 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN+L   L  +   D    LF  +   G  P+ +T  IL+  +CK G    G  +
Sbjct: 145 PETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      PN V + +++   C E R  ++  L  K R     PD+ T+N+ I+ LC+
Sbjct: 205 LNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCK 264

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  +F +M     E+  + +PN++TYN ++ G CK G ++ AK LF  +++ + 
Sbjct: 265 EGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              + +Y   ++G      + EA+ +  +M+D+G+ P + +++++MD LCK G +  A  
Sbjct: 323 LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           ++ LM   GV+P+  TY  L+ GYC   K+D A+ L   M  N C+ +  + N L++   
Sbjct: 383 IVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA--- 461
               + EA  L  +M  KG     VT N +  GL    ++++A+++   MR +  AA   
Sbjct: 443 NMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 462 --------------------DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
                               D  TY+  ++GLCK+G   EA  LF  +   K + + ++Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAY 562

Query: 502 NCLI 505
           N  I
Sbjct: 563 NIFI 566



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 215/422 (50%), Gaps = 30/422 (7%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + S+NI    L ++  +    ++ K++   G+ P IY+++IL++  CK+G +S    ++G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + R+  +P+AVT+  L+ G C+  ++  A +L  +     C P+ +T N L++ L   G
Sbjct: 386 LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMG 445

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK------ 280
               A  L  +M N  G +G+    +TVT N I+DGLC  G +DKA E+   M+      
Sbjct: 446 RISEAEELLRKM-NEKG-YGL----DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA 499

Query: 281 -----------------DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
                            + N  PD++TY++++ G C A  + EAK LF EMM + +QPD 
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDS 559

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           + +++ +   CK GK+  A R+L+ M  +G + +  TYN+LI G  + ++I     L   
Sbjct: 560 LAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE 619

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   ++ +YNT I + C+   VE+A +L  EM+ K I P V ++  L     ++  
Sbjct: 620 MREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPD 679

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            + A ++F E   +        Y+   + L  +G +L+A EL  A+ D  +EL    Y  
Sbjct: 680 FDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738

Query: 504 LI 505
           L+
Sbjct: 739 LV 740



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 193/396 (48%), Gaps = 10/396 (2%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R   + P +  +N+L     + +  + V  L+K +   G+ P+ YT ++LI   C    V
Sbjct: 104 RFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCV 163

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                +   +      PN  TF  L++G C      +   L      F   P+   YNT+
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           ++  CR G    +  L E+M     E G+V  P+ VT+N+ I  LCKEG V  A  +F  
Sbjct: 224 VSSFCREGRNDDSEKLVEKMR----EEGLV--PDIVTFNSRISALCKEGKVLDASRIFSD 277

Query: 279 MK-DENIN---PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           M+ DE +    P+ +TY  +++GFC      +AK LF  + +      + ++++ +  L 
Sbjct: 278 MELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLV 337

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           ++GK  +A  +L+ MI +G+ P+ Y+YN L+DG C    +  A+ +   M+ NG   D V
Sbjct: 338 RHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAV 397

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  L++ YC    V+ A SL  EM+     P   T N L   L+ + ++  A +L  +M
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKM 457

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
                  DT T N  +DGLC SG + +A+E+ + +R
Sbjct: 458 NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 138/263 (52%), Gaps = 4/263 (1%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP    YN +++   +E  V+    L+  M    I+P+  T+  +IR  C ++  + A+ 
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF EM ++G +P+  TF +++   CK G  DK   LL  M   GV PN   YNT++  +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM-LSKGI---K 425
              + D + KL   M   G + D+V++N+ I+  CK   V +A  ++S+M L + +   +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P  +TYN +  G  ++  +E A  LF+ +R N       +YN ++ GL + G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
            + + D     +I SYN L+DGL
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGL 371



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 40/263 (15%)

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD+ T+S L+N  CK GR +    +   ++     P+++ +   I   C + +I  A  
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           +        C   + TYN+LI GL           L +EM     E G+   PN  TYNT
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMR----EKGI--SPNICTYNT 634

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI------ 312
            I  LC+ G V+ A  L  +M  +NI P+V ++  +I  FC   D++ A+ +F       
Sbjct: 635 AIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSIC 694

Query: 313 ----------------------------EMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                                        ++D+G +     +  ++  LCK  +++ AS 
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASG 754

Query: 345 LLELMIWRGVNPNTYTYNTLIDG 367
           +L  MI +G   +      +IDG
Sbjct: 755 ILHKMIDKGYGFDPAALMPVIDG 777


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 212/412 (51%), Gaps = 11/412 (2%)

Query: 96  YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM 155
           Y +R     P V  +N++   L     +  + +L+  + S GL P+++T+++L+   C+ 
Sbjct: 133 YRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQN 192

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G+V     +L  +      P+ V++T++I  +C    + +A  L  K      EP V  Y
Sbjct: 193 GKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKF-----EPVVPVY 247

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N LI+G+C+      A +L  EM     + GV   PN ++Y+T+I  L   G V+ +  +
Sbjct: 248 NALIHGVCKECRFKEAFDLMNEMV----DRGV--DPNVISYSTVISCLSDMGNVELSLAV 301

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
           F +M      P+V T+TS+I+GF       +A  L+  M+ +GV P+VV ++ ++  LC 
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCS 361

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           +G MD+A  +   M    + PN  TY+T+I G+  +  +  A + +  M + GC  +VV 
Sbjct: 362 DGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVV 421

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y  +++  C+    ++A  L   M+S G  PTV+T+N    GL    +VE A+ + D+M 
Sbjct: 422 YTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQME 481

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +     +  TYN  +DGL ++    EA  L R + + K E + V+YN ++ G
Sbjct: 482 KYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYG 533



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 35/434 (8%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   L +N   D    L   +++ G  PD  +++ +I+  CK+G V      
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA--- 233

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R L   F P    + +LI G+C E R  EA  L  +      +P+V +Y+T+I+ L  
Sbjct: 234 --RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSD 291

Query: 225 TGHTIVALNLFEEM-------------------------ANGNGEFGVVCK----PNTVT 255
            G+  ++L +F  M                          +  G + ++ +    PN V 
Sbjct: 292 MGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVA 351

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I GLC +G +D+A  ++ +M+ ++I P+V TY+++I GF  + D   A   + +M+
Sbjct: 352 YNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMI 411

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G +P+VV ++ ++D LC+    D+A  L++ MI  G  P   T+N  I G C   +++
Sbjct: 412 NCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVE 471

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  +   ME   C+ ++ +YN L++   +     EA  L  E+  + ++   VTYNT+ 
Sbjct: 472 WAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIM 531

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK-Y 494
            G       ++ L+L  +M  N +  DT T N  ++  CK G V  A+++   I   K +
Sbjct: 532 YGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEF 591

Query: 495 ELNIVSYNCLIDGL 508
             +I+++  ++ G+
Sbjct: 592 RADIITHTIILWGI 605



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 46/435 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++  +   L +N   D V  L +++    +         +I C+ +      G  +  RI
Sbjct: 76  TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 P+   +  ++  L +++      AL+   +    EP+VFTYN L+  LC+ G  
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A  L  EM+N        C P+ V+Y T+I  +CK G VDKA+EL +K +     P V
Sbjct: 196 DGACKLLVEMSNKG------CDPDDVSYTTVISSMCKLGDVDKARELAMKFE-----PVV 244

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
             Y ++I G C    + EA  L  EM+D+GV P+V+++S ++  L   G ++ +  +   
Sbjct: 245 PVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGR 304

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  RG  PN  T+ +LI G+ +  ++  A  L+  M   G   +VV+YNTLI+  C + +
Sbjct: 305 MFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGN 364

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLG------------------------------- 437
           ++EA+S++++M    I+P V TY+T+  G                               
Sbjct: 365 MDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTC 424

Query: 438 ----LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
               L ++   ++A  L D M  +       T+NNFI GLC++G V  A+ +   +   +
Sbjct: 425 MVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYE 484

Query: 494 YELNIVSYNCLIDGL 508
              NI +YN L+DGL
Sbjct: 485 CLPNIRTYNELLDGL 499



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 177/404 (43%), Gaps = 42/404 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   + K   +     L   +   G+ P++ ++S +I+C   MG V     V
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            GR+      PN  TFTSLIKG     R+ +A  L+         P+V  YNTLI+GLC 
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCS 361

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   A++++ +M   +       +PN  TY+TII G  K G +  A E + KM +   
Sbjct: 362 DGNMDEAISVWNQMEKDS------IRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGC 415

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV YT ++   C  + +++A  L   M+  G  P V+TF+  +  LC+ G+++ A  
Sbjct: 416 RPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMN 475

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L+ M      PN  TYN L+DG    +    A  L   +E      D V+YNT++  + 
Sbjct: 476 VLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFS 535

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNT------------------------------- 433
            N   ++ L L  +ML  GIK   +T NT                               
Sbjct: 536 FNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADI 595

Query: 434 -----LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
                +  G+      E A+    EM +  +  +  T+N  + G
Sbjct: 596 ITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRG 639



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 177/378 (46%), Gaps = 32/378 (8%)

Query: 94  FDYMLRM--HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           FD M  M      P V S++ +  CL+   + +  L++F R+   G  P++ T + LI  
Sbjct: 264 FDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKG 323

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           F   GRV     +   ++R   +PN V + +LI GLC++  + EA +++ +    +  P+
Sbjct: 324 FFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPN 383

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------------------- 248
           V TY+T+I G  ++G  + A   + +M N      VV                       
Sbjct: 384 VTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLID 443

Query: 249 ------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                 C P  +T+N  I GLC+ G V+ A  +  +M+     P++ TY  ++ G   AN
Sbjct: 444 NMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRAN 503

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
            + EA  L  E+ ++ V+ D VT++ IM     NG   +  +LL  M+  G+  +T T N
Sbjct: 504 AFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVN 563

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW-YCKNKDVEEALSLYSEMLS 421
           T ++ YC   K+  A K+  ++ +       +  +T+I W  C     EEA+    EML 
Sbjct: 564 TTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLK 623

Query: 422 KGIKPTVVTYNTLFLGLF 439
           +GI P + T+N L  G F
Sbjct: 624 RGIFPNIATWNVLVRGFF 641



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 147/316 (46%), Gaps = 36/316 (11%)

Query: 224 RTGHTIVA-LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           R  H IV+ L  F+ ++N +G F    K   +TY T+ID L +   +D    L  +MK E
Sbjct: 49  RQEHDIVSSLEYFKSLSN-SGTF----KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+      +  VI+ +  +N   +  ++F  + + G +P V  +++++D L         
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           + L   M   G+ PN +TYN L+   C   K+D A KL V M + GC  D VSY T+I+ 
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223

Query: 403 YCKNKDVE------------------------------EALSLYSEMLSKGIKPTVVTYN 432
            CK  DV+                              EA  L +EM+ +G+ P V++Y+
Sbjct: 224 MCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYS 283

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           T+   L ++  VE +L +F  M       +  T+ + I G    G V +A+ L+  +   
Sbjct: 284 TVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIRE 343

Query: 493 KYELNIVSYNCLIDGL 508
               N+V+YN LI GL
Sbjct: 344 GVSPNVVAYNTLIHGL 359


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 209/465 (44%), Gaps = 68/465 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG--- 161
           P V +F  L     K    D    LFK +   G+ PD+  +S LI+ + K G +  G   
Sbjct: 176 PNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKL 235

Query: 162 --------------------------------FVVLGRILRSCFTPNAVTFTSLIKGLCA 189
                                           F V  R+L    +PN VT+T LIKGLC 
Sbjct: 236 FSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQ 295

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           + RI EA  ++ +      EP V TY++LI+G C+ G+      L+E+M        +  
Sbjct: 296 DGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIK------MGY 349

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+ V Y  ++DGLCK+G +  A    +K   ++I P+VV + S+I G+C  N  +EA +
Sbjct: 350 PPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALK 409

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           +F  M   G++PDV T + +M      G++ +   L   M   G+ P+   + TL+D +C
Sbjct: 410 VFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFC 469

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              K     +LF  M+ N    D+   N +IN   K + VEEA   ++ +L   ++P +V
Sbjct: 470 KNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIV 529

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI------------------- 470
           TYNT+  G   + +++ A ++F+ ++      +  T    I                   
Sbjct: 530 TYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPS 589

Query: 471 --------DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                   DGLCK G V EA  +F    D+K   ++V+Y  LI G
Sbjct: 590 IISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRG 634



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 188/374 (50%), Gaps = 12/374 (3%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  P++ T   LIN FCK G +   F +   + +    P+ + +++LI G      +   
Sbjct: 173 GPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMG 232

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNT 253
             LF++      + DV  +++ I+   + G+   A ++++ M         +C+   PN 
Sbjct: 233 HKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRM---------LCQGISPNV 283

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           VTY  +I GLC++G + +A  ++ ++    + P VVTY+S+I GFC   +      L+ +
Sbjct: 284 VTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYED 343

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+  G  PDVV + V++D LCK G M  A R     + + + PN   +N+LIDG+C  ++
Sbjct: 344 MIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNR 403

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            D A K+F  M   G   DV +  TL+        ++E L L+  M   G++P  V + T
Sbjct: 404 CDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCT 463

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L     +  +    L+LFD M+RN + AD    N  I+ L K   V EA + F  + + K
Sbjct: 464 LMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGK 523

Query: 494 YELNIVSYNCLIDG 507
            E +IV+YN +I G
Sbjct: 524 MEPDIVTYNTMICG 537



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 182/398 (45%), Gaps = 35/398 (8%)

Query: 94  FDYMLRM--HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           FD   RM      P V ++ IL   L ++        ++ ++   GL P + T+S LI+ 
Sbjct: 268 FDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDG 327

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           FCK G +  GF +   +++  + P+ V +  L+ GLC +  ++ A     K    +  P+
Sbjct: 328 FCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPN 387

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V  +N+LI+G CR      AL +F  M    G +G+  KP+  T  T++     EG + +
Sbjct: 388 VVVFNSLIDGWCRLNRCDEALKVFRLM----GIYGI--KPDVATITTLMRVTVMEGRLKE 441

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
              LF +M    + PD V + +++  FC         +LF  M    +  D+   +V+++
Sbjct: 442 GLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVIN 501

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            L K   +++AS+    ++   + P+  TYNT+I GYC   ++D A ++F  ++      
Sbjct: 502 LLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGP 561

Query: 392 DVVSYNTLINWYCKNKD---------------------------VEEALSLYSEMLSKGI 424
           + V+   LI+  CKN D                           V+EA +++ + +   I
Sbjct: 562 NAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKI 621

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            P VV Y  L  G  ++ ++  A  L++ M RN V  D
Sbjct: 622 LPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 8/283 (2%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNT-----IIDGLCKEGFVDKAKELFLKMKDENIN 285
           AL+ F+     +  F  +C+  TV +       ++D L ++G V KA +    + +    
Sbjct: 84  ALDTFD--GQRSDSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFR 141

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            D+V+   +++G    +    A R+   ++D G  P+VVTF  +++  CK G+MD+A  L
Sbjct: 142 VDIVSCNKILKGLS-VDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFEL 200

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            ++M  RG+ P+   Y+TLIDGY     +    KLF      G   DVV +++ I+ Y K
Sbjct: 201 FKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 260

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
              +  A  +Y  ML +GI P VVTY  L  GL +  ++  A  ++ ++ +  +     T
Sbjct: 261 FGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVT 320

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y++ IDG CK G +     L+  +    Y  ++V Y  L+DGL
Sbjct: 321 YSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 363



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 33/287 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  FN L     +    D  L +F+ +   G+ PD+ T + L+      GR+  G  +
Sbjct: 386 PNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFL 445

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+ +    P+AV F +L+   C   +      LF   +      D+   N +IN L +
Sbjct: 446 FFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFK 505

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A   F  +  G  E      P+ VTYNT+I G C    +D+A  +F  +K    
Sbjct: 506 GQSVEEASKFFNNLLEGKME------PDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPF 559

Query: 285 NPDVVTYTSVIRGFCYANDWN---------------------------EAKRLFIEMMDQ 317
            P+ VT T +I   C  +D +                           EA  +F + +D 
Sbjct: 560 GPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDA 619

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            + PDVV +++++   CK G++ +A+ L E M+  GV P+      L
Sbjct: 620 KILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 199/430 (46%), Gaps = 30/430 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++ NIL   L +   +      F  +   G+ PD+Y  +  IN FCK G+V     +
Sbjct: 213 PSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 271

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++  +   PN VTF ++I GL    R  EA     K      EP + TY+ L+ GL R
Sbjct: 272 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 331

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTV-----------------------------T 255
                 A  + +EM        V+   N +                             T
Sbjct: 332 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 391

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YNT+I G CK G  D A+ L  +M     N +  ++TSVI   C    ++ A R   EM+
Sbjct: 392 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 451

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            + + P     + ++  LCK+GK  KA  L    + +G   +T T N L+ G C   K+D
Sbjct: 452 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 511

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A ++   +   GC+ D VSYNTLI+  C  K ++EA     EM+ +G+KP   TY+ L 
Sbjct: 512 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 571

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GLF +++VE A++ +D+ +RN +  D YTY+  IDG CK+    E  E F  +     +
Sbjct: 572 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 631

Query: 496 LNIVSYNCLI 505
            N V YN LI
Sbjct: 632 PNTVVYNHLI 641



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 206/448 (45%), Gaps = 30/448 (6%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M     +P  V +FN +   L     YD      +++   G+ P + T+SIL
Sbjct: 267 EAVKLFSKMEEAGVAPN-VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 325

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +    +  R+   + VL  + +  F PN + + +LI        + +A  +         
Sbjct: 326 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 385

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEF-GVVC------------- 249
                TYNTLI G C+ G    A  L +EM +       G F  V+C             
Sbjct: 386 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 445

Query: 250 ----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P      T+I GLCK G   KA EL+ +  ++    D  T  +++ G C
Sbjct: 446 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 505

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A   +EA R+  E++ +G   D V+++ ++   C   K+D+A   L+ M+ RG+ P+ Y
Sbjct: 506 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 565

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TY+ LI G    +K++ A + +   + NG + DV +Y+ +I+  CK +  EE    + EM
Sbjct: 566 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 625

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           +SK ++P  V YN L        ++  AL+L ++M+   ++ ++ TY + I G+     V
Sbjct: 626 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 685

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDG 507
            EA  LF  +R    E N+  Y  LIDG
Sbjct: 686 EEAKLLFEEMRMEGLEPNVFHYTALIDG 713



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 185/399 (46%), Gaps = 9/399 (2%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            SF  +   L  +  +D+ L     +    + P     + LI+  CK G+ S    +  +
Sbjct: 425 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 484

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            L   F  +  T  +L+ GLC   ++ EA  +  +     C  D  +YNTLI+G C    
Sbjct: 485 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 544

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A    +EM           KP+  TY+ +I GL     V++A + +   K   + PD
Sbjct: 545 LDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 598

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V TY+ +I G C A    E +  F EMM + VQP+ V ++ ++   C++G++  A  L E
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M  +G++PN+ TY +LI G  +  +++ A+ LF  M   G   +V  Y  LI+ Y K  
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +   L  EM SK + P  +TY  +  G      V  A +L +EMR   +  D+ TY 
Sbjct: 719 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 778

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            FI G  K G VLEA   F+   +  Y   I  +N LI 
Sbjct: 779 EFIYGYLKQGGVLEA---FKGSDEENYAAIIEGWNKLIQ 814



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 149/302 (49%), Gaps = 13/302 (4%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKE 266
           P   T N L+  L R        N F++       F VVCK   P+   + T I+  CK 
Sbjct: 213 PSKTTCNILLTSLVRA-------NEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKG 262

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G V++A +LF KM++  + P+VVT+ +VI G      ++EA     +M+++G++P ++T+
Sbjct: 263 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 322

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++  L +  ++  A  +L+ M  +G  PN   YN LID +     ++ A ++   M S
Sbjct: 323 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 382

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G      +YNTLI  YCKN   + A  L  EMLS G      ++ ++   L      + 
Sbjct: 383 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 442

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL+   EM   +++         I GLCK G   +ALEL+    +  + ++  + N L+ 
Sbjct: 443 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 502

Query: 507 GL 508
           GL
Sbjct: 503 GL 504



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)

Query: 397 NTLINWYC---KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           + LI  YC   K      AL ++  + +KG+ P+  T N L   L   ++ ++  + FD 
Sbjct: 181 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 240

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  V+ D Y +   I+  CK G V EA++LF  + ++    N+V++N +IDGL
Sbjct: 241 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL 294



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F+ M RM    P V  +  L     K      V  L + ++S  + P+  T++++
Sbjct: 687 EAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVM 745

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           I  + + G V+    +L  +      P+++T+   I G   +  ++EA
Sbjct: 746 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 793


>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 182/359 (50%), Gaps = 45/359 (12%)

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN---------- 216
           R+     TP    F  ++  L   +R   A +   K      +PD+FTYN          
Sbjct: 53  RLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLG 112

Query: 217 -----------TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
                      TLINGLC+ G T  AL L +E+     ++ VV       Y  II+GLCK
Sbjct: 113 HTHFLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVV------MYTAIINGLCK 166

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  VD A +L+ +M  + ++PDV TY ++I GFC      +A  LF +M  + V+ D  T
Sbjct: 167 DKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYT 226

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++   CK G + +   ++ +M+  GV P+  TYN+L+DGYCL  ++D A+ +F +M 
Sbjct: 227 FNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMV 286

Query: 386 SNGC------------MH------DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
             G             MH      D ++Y++LI+ +CK+  + +AL L  EM  +G  P 
Sbjct: 287 QRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPN 346

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           ++TYN++   L +IH VE+ + L  +++   +  D YTY    +GL K G + EA E+F
Sbjct: 347 IITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIF 405



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 38/368 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+S F  +   LA +  Y   LS  ++L+  G+ PD++T+++LINCF ++G        
Sbjct: 61  PPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTH----F 116

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R          V++ +LI GLC       A  L  +      + DV  Y  +INGLC+
Sbjct: 117 LDR----------VSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCK 166

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A +L+ EM            P+  TYN +I G C  G +  A  LF  MK EN+
Sbjct: 167 DKLVDDAFDLYTEMVAKR------VSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENV 220

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  T+ +++  FC   +  E K +   MM +GV+PD++T++ +MD  C   ++DKA  
Sbjct: 221 EADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKN 280

Query: 345 LLELMIWRGVN------------------PNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           +   M+ RGV                   P+T  Y++LIDG+C + +I  A +L   M  
Sbjct: 281 IFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHD 340

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   ++++YN+++   CK   VE+ ++L  ++  KGI+P   TY  L  GLF+  ++E 
Sbjct: 341 RGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEE 400

Query: 447 ALKLFDEM 454
           A ++F ++
Sbjct: 401 AREIFPDL 408



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 32/277 (11%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP+  TYN +I+   + G        FL         D V+Y ++I G C   +   A R
Sbjct: 95  KPDLFTYNVLINCFSQLGHTH-----FL---------DRVSYETLINGLCKVGETRAALR 140

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  E+ ++ VQ DVV ++ I++ LCK+  +D A  L   M+ + V+P+ +TYN +I G+C
Sbjct: 141 LLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFC 200

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
           +  ++  A  LF  M+      D  ++NTL++ +CK  +V E  ++ + M+ +G+KP ++
Sbjct: 201 VVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDII 260

Query: 430 TYNTLFLGLFEIHQVERA------------------LKLFDEMRRNHVAADTYTYNNFID 471
           TYN+L  G   + +V++A                  + LF EM    +  DT  Y++ ID
Sbjct: 261 TYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLID 320

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G CKSG + +ALEL   + D     NI++YN ++  L
Sbjct: 321 GFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYAL 357



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 21/218 (9%)

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN-------- 362
           F  + +Q   P +  F  I+  L  + +   A    + + ++G+ P+ +TYN        
Sbjct: 51  FNRLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQ 110

Query: 363 -------------TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
                        TLI+G C   +   A +L   +      +DVV Y  +IN  CK+K V
Sbjct: 111 LGHTHFLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLV 170

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           ++A  LY+EM++K + P V TYN +  G   + +++ A+ LF++M+  +V AD YT+N  
Sbjct: 171 DDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTL 230

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +   CK G V E   +   +     + +I++YN L+DG
Sbjct: 231 VSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDG 268



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D M      PP + ++N +   L K  H +  ++L +++   G+ PD YT++IL
Sbjct: 330 QALELVDEM-HDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTIL 388

Query: 149 INCFCKMGRVSHG 161
            N   K GR+   
Sbjct: 389 TNGLFKDGRLEEA 401


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 205/396 (51%), Gaps = 10/396 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++AL +F  +    P+ P + + N +   L K + +D V  LF  + S G+ P + T++ 
Sbjct: 110 DDALSVFCRL----PTLPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNT 165

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N     G ++  + V  +++     PN VT++++I  LC E  ++EA  LF   +   
Sbjct: 166 LVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETG 225

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +P+++TYN L++  C+       L L++E+       G+V  PN V   T+I G     
Sbjct: 226 VQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKS----GLV--PNAVIITTLIGGFFLAN 279

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +   K  FL+M    I P V  Y S+I G   +    EA  ++ +M   G+ PD  T S
Sbjct: 280 RISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCS 339

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +I+  LC  G++  A+R LELM   G+N N   YN LID +C    +  A      M   
Sbjct: 340 IIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEV 399

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VV+Y++LI+ + K + +E A+ +Y EM++KG++P V+TY  +  G  +   ++ A
Sbjct: 400 GIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAA 459

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
            +L  EM    ++++  T +  +DGLC+   V +A+
Sbjct: 460 FRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAV 495



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 198/399 (49%), Gaps = 9/399 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
             +L   L++   +D  LS+F RL +    P +   + +++   K  R    + +   +L
Sbjct: 96  LGVLVIALSQMGLHDDALSVFCRLPT---LPALPACNAILDGLVKARRFDRVWKLFDEML 152

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                P+ VT+ +L+     E  + +A  ++ +      +P+V TY+T+I  LC  G  I
Sbjct: 153 SRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVI 212

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A  LF  M     E GV  +PN  TYN ++   CK   V++   L+ ++    + P+ V
Sbjct: 213 EAERLFIMMK----ETGV--QPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAV 266

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
             T++I GF  AN  ++ K  F+EM   G+ P V  ++ ++D   ++G   +A  + + M
Sbjct: 267 IITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDM 326

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              G+ P+ +T + ++ G C   ++  A +    M+ +G   +  +YN LI+ +CK+ ++
Sbjct: 327 TRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNL 386

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
            EAL+  + M   GI+P VVTY++L  G  +  ++E A+ ++ EM    V  +  TY   
Sbjct: 387 AEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAM 446

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           I G  K G +  A  L + + +     N ++ + L+DGL
Sbjct: 447 IHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGL 485



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 172/408 (42%), Gaps = 90/408 (22%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +++ +   L +         LF  +   G+ P++YT++ L++  CK   V+    +
Sbjct: 193 PNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTL 252

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING--- 221
              +L+S   PNAV  T+LI G    +RI +    F +   +   P V  YN+LI+G   
Sbjct: 253 YQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFR 312

Query: 222 --------------------------------LCRTGHTIVALNLFEEMA---------- 239
                                           LC  G   VA    E M           
Sbjct: 313 SGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAA 372

Query: 240 ----------NGN-----------GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
                     +GN            E G+  +PN VTY+++IDG  K+  ++ A  ++++
Sbjct: 373 YNALIDEHCKDGNLAEALATCTRMNEVGI--EPNVVTYSSLIDGHSKKRKMEIAMGIYME 430

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  + + P+V+TYT++I G     D + A RL  EM ++G+  + +T SV++D LC+  +
Sbjct: 431 MVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESR 490

Query: 339 MDKASRLLELMIWRGVNP--------------------NTYTYNTLIDGYCLTDKIDHAR 378
           +  A  ++ +M + G                       N+ TY TLI G  +  +   A 
Sbjct: 491 VQDA--VMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAG 548

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           K F  M  +  + D  +Y+ LI   C    V  A+ LY++M+  G+KP
Sbjct: 549 KFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKP 596



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 47/303 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L     ++ +    L++++ +   GL PD +T SI++   C  G+V      
Sbjct: 298 PTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRF 357

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +S    NA  + +LI   C +  + EA A  T+      EP+V TY++LI+G  +
Sbjct: 358 LELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSK 417

Query: 225 TGHTIVALNLFEEMA---------------NGNGEFGVV--------------CKPNTVT 255
                +A+ ++ EM                +G+ +FG +                 N +T
Sbjct: 418 KRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAIT 477

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDV------------------VTYTSVIRG 297
            + ++DGLC+E  V  A    +K   +    D+                  VTY ++I G
Sbjct: 478 VSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYG 537

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
                 ++EA + F  M +  + PD  T+S+++   C  G +  A  L   M+  GV P 
Sbjct: 538 LYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKPR 597

Query: 358 TYT 360
            Y 
Sbjct: 598 RYA 600


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 191/404 (47%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  +   L +      + SL   +   GL P++  ++ +I   CK    S    V
Sbjct: 344 PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++ S F P+ VTF +LI   C E  + EA  L  +      EP+  +Y  LI+G C 
Sbjct: 404 LNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  +VA +L  EM  G G       P+ VT   +I GL   G VD+A  +  KM +  +
Sbjct: 464 RGEVMVASDLLVEMI-GRGH-----TPDVVTLGALIHGLVVSGQVDEALMVREKMAERQV 517

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   Y  +I G C     + AK L +EM++Q VQPD   ++ ++D   ++ K+  A +
Sbjct: 518 MPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + E M  +G   +   YN +I GYC +  ++ A     SM   GC+ D  +Y TLI+ Y 
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D++ AL    +M+ +  KP +VTY +L  G   I   + A  LF  M+   +  +  
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVV 697

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            Y   I  L K    ++A   F  +  +    N  + + L++GL
Sbjct: 698 HYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741



 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 191/407 (46%), Gaps = 41/407 (10%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  P    +++LI+ +C+ G V  G ++LG +      P  VT+ ++I  L  +S + + 
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
            +L  + +     P+V  YNT+I  LC+      AL +  +M     +      P+ VT+
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFD------PDVVTF 419

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I   C+EG V++A +L  +     + P+ ++YT +I GFC   +   A  L +EM+ 
Sbjct: 420 NTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIG 479

Query: 317 QGVQPDVVT-----------------------------------FSVIMDELCKNGKMDK 341
           +G  PDVVT                                   ++V++  LCK   +  
Sbjct: 480 RGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSA 539

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  LL  M+ + V P+ + Y TLIDG+  +DK+  ARK+F  ME  G   D+V+YN +I 
Sbjct: 540 AKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIK 599

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            YCK+  + EA+   S M   G  P   TY TL  G  +   ++ AL+   +M +     
Sbjct: 600 GYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKP 659

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TY + I G C  G    A  LF +++      N+V Y  LI  L
Sbjct: 660 NIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706



 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 194/431 (45%), Gaps = 56/431 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L K +     L++  ++ ++   PD+ T + LI  FC+ G V     +
Sbjct: 379 PNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKL 438

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +R    PN +++T LI G C    +M A+ L  +       PDV T   LI+GL  
Sbjct: 439 LREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVV 498

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    AL + E+MA           P+   YN +I GLCK+  +  AK L ++M ++ +
Sbjct: 499 SGQVDEALMVREKMAERQ------VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKV 552

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   YT++I GF  ++  ++A+++F  M ++G   D+V ++ ++   CK+G M++A  
Sbjct: 553 QPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVM 612

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            +  M   G  P+ +TY TLIDGY     I  A +    M    C  ++V+Y +LI  YC
Sbjct: 613 CMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYC 672

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
              + + A  L++ M S+G+ P VV Y  L   LF+  +  +A   F+ M  NH + +  
Sbjct: 673 NIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA 732

Query: 465 T--------------------------------------------------YNNFIDGLC 474
           T                                                  YN  I  LC
Sbjct: 733 TMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLC 792

Query: 475 KSGFVLEALEL 485
           +   + +A+EL
Sbjct: 793 RHNMLGKAMEL 803



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 21/352 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V +   L   L  +   D  L + +++    + PD   +++LI+  CK   +S    +
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 543

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     P+   +T+LI G     ++ +A  +F          D+  YN +I G C+
Sbjct: 544 LVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCK 603

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A+     M        V C P+  TY T+IDG  K+G +  A      M     
Sbjct: 604 SGMMNEAVMCMSSMRK------VGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++VTY S+I G+C   + + A+ LF  M  +G+ P+VV ++V++  L K  K  +A+ 
Sbjct: 658 KPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAA 717

Query: 345 LLELMIWRGVNPNTYTYNTLIDG-----YCLTDK----IDHARK------LFVSMESNGC 389
             E M+    +PN  T + L++G     Y + +      D A K      +F  + S+G 
Sbjct: 718 YFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGL 777

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
              + +YN +I   C++  + +A+ L  +M +KG  P  VT+ +L  G   +
Sbjct: 778 DPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSV 829



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 131/312 (41%), Gaps = 39/312 (12%)

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  L+ EM   + E G     +  +   ++ GLC EG V++ + L      E   P  V 
Sbjct: 258 ARRLYGEMLARDREGGA----DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVF 313

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y  +I G+C   D      L  EM  +G+ P VVT+  I+  L +   + K   LL  M 
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
            RG++PN   YNT+I   C       A  +   M ++    DVV++NTLI  +C+  DVE
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433

Query: 411 EALSLYS-----------------------------------EMLSKGIKPTVVTYNTLF 435
           EAL L                                     EM+ +G  P VVT   L 
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL    QV+ AL + ++M    V  D   YN  I GLCK   +  A  L   + + K +
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 496 LNIVSYNCLIDG 507
            +   Y  LIDG
Sbjct: 554 PDKFVYTTLIDG 565



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 21/224 (9%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           P+I T++ LI  +C +G      V+   +      PN V +T LI  L  + + ++AAA 
Sbjct: 659 PNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAY 718

Query: 200 FTKHRVFACEPDVFTYNTLINGL--CRTG------------HTIVA-LNLFEEMANGNGE 244
           F    +  C P+  T + L+NGL  CR G            H   A L++F+ + +    
Sbjct: 719 FEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDG-- 776

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                 P    YN II  LC+   + KA EL  KM ++   PD VT+ S++ GF      
Sbjct: 777 ----LDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKS 832

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            + +        Q     +  +  ++++   +   D+ SR+L+L
Sbjct: 833 GKWRSALPNEFQQDEFEIICKYMTLLNQHVMSPVRDEVSRVLQL 876


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 207/403 (51%), Gaps = 11/403 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N +   L     +  +  ++  +   G+  ++YT+++L+   CK  RV     +
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +      P+AV++T+++  +C   ++ EA  L  + + F     V  YN LING CR
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCR 255

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                    LF EMA           P+ +TY+T+I+ L + G V+ A  +  KM     
Sbjct: 256 EHKMEEVFELFNEMAVEG------IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGC 309

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+V T+TS+++G+       EA  L+  M+ +G +P+ V ++ ++  LC  GKM +A  
Sbjct: 310 SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + M   GV PN  TY+TLIDG+     +  A +++  M +NGC+ +VV Y  +++  C
Sbjct: 370 VSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLC 429

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +N     AL L   M +    P  +T+NT   GL    + E A+K+ ++MR+   A +  
Sbjct: 430 RNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVT 489

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  +DGL  +    EAL++   I + + + N+V+YN ++ G
Sbjct: 490 TYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 207/432 (47%), Gaps = 35/432 (8%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N+L   L KN   D    L   ++  G  PD  +++ +++  C++G+V     +  
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 237

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           RI    F P    + +LI G C E ++ E   LF +  V   +PDV TY+T+IN L   G
Sbjct: 238 RI--KSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMG 292

Query: 227 HTIVALNL---------------FEEMANGNGEFGVVCK--------------PNTVTYN 257
           +  +AL +               F  +  G    G +C+              PNTV YN
Sbjct: 293 NVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYN 352

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           T+I GLC  G + +A  +  KM+   + P+  TY+++I GF  A D   A  ++ +M+  
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G  P+VV ++ ++D LC+N   + A  L+E M      PNT T+NT I G C + K + A
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWA 472

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            K+   M   GC  +V +YN +++     K   EAL +  E+    IK  +VTYNT+  G
Sbjct: 473 MKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSG 532

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF-RAIRDSKYEL 496
                  + AL++  ++       D+ TYN  I   CK G V  A++L  R  +  +   
Sbjct: 533 FCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYP 592

Query: 497 NIVSYNCLIDGL 508
           ++ +Y  L+ G+
Sbjct: 593 DVFTYTSLLWGV 604



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 189/404 (46%), Gaps = 44/404 (10%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  +N L     +    + V  LF  +   G+ PD+ T+S +IN   +MG V     VL 
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302

Query: 167 RI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
           ++ LR C +PN  TFTSL+KG     R+ EA  L+ +      EP+   YNTLI+GLC  
Sbjct: 303 KMFLRGC-SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSY 361

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           G  + A+++ ++M   NG F     PN  TY+T+IDG  K G +  A E++ KM      
Sbjct: 362 GKMVEAVSVSQKMER-NGVF-----PNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+VV YT ++   C  + +N A  L   M +    P+ +TF+  +  LC +GK + A ++
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475

Query: 346 LELMIWRGVNPN--TY---------------------------------TYNTLIDGYCL 370
           L  M   G  PN  TY                                 TYNT++ G+C 
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK-PTVV 429
                 A ++   +   G   D ++YNT+I  YCK  +V+ A+ L   +  KG   P V 
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVF 595

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           TY +L  G+     V+ A+   D+M    +  +  T+N  + GL
Sbjct: 596 TYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 217/472 (45%), Gaps = 26/472 (5%)

Query: 52  LKESLRLTVKDRASLKKFLKERCK--SSGQGDINLITPNEALCIF----DYMLRMHPSPP 105
           LKE   L +K +  L  F+        + Q D+NL+  +E L       + +L +H    
Sbjct: 3   LKEGCSLLLKKQKPLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKS 62

Query: 106 PVSS---------FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
             +S         +  +   L   +  D +  L + +   G+  +     I+IN + + G
Sbjct: 63  IANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAG 122

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
                     RI      P+   +  ++  L +E++      ++   +    E +V+TYN
Sbjct: 123 LAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYN 182

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L+  LC+      A  L  EM+         C P+ V+Y T++  +C+ G V++A+EL 
Sbjct: 183 MLLKALCKNDRVDAARKLLAEMSYKG------CIPDAVSYTTVVSSMCRLGKVEEARELS 236

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
           +++K       V  Y ++I GFC  +   E   LF EM  +G+ PDV+T+S +++ L + 
Sbjct: 237 MRIKS-----FVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEM 291

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G ++ A  +L  M  RG +PN +T+ +L+ GY +  ++  A  L+  M   G   + V+Y
Sbjct: 292 GNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAY 351

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           NTLI+  C    + EA+S+  +M   G+ P   TY+TL  G  +   +  A +++++M  
Sbjct: 352 NTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMIT 411

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N    +   Y   +D LC++     AL L   + +     N +++N  I GL
Sbjct: 412 NGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 8/351 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +   M  +    P V +F  L             L L+ R+   G  P+   ++ LI
Sbjct: 297 ALAVLAKMF-LRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLI 355

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  C  G++     V  ++ R+   PN  T+++LI G      ++ A+ ++ K     C 
Sbjct: 356 HGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V  Y  +++ LCR      AL+L E MANGN      C PNT+T+NT I GLC  G  
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGN------CPPNTITFNTFIKGLCCSGKT 469

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           + A ++  +M+     P+V TY  V+ G   A    EA ++  E+ +  ++ ++VT++ I
Sbjct: 470 EWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTI 529

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   C  G    A ++   ++  G  P++ TYNT+I  YC   ++  A +L   +   G 
Sbjct: 530 LSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGE 589

Query: 390 MH-DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
            + DV +Y +L+   C    V+EA+    +M+++GI P   T+N L  GLF
Sbjct: 590 GYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLF 640


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 190/393 (48%), Gaps = 6/393 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN     L +    +T L LF  + S G  PD+ +++I+I+  C   R      V
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++    +P+     +L+ GLC+  R+  A  L         + +   YN LI+G CR
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ +   M+         C P+ VTYN +++  C+EG VD+A  L   M+   +
Sbjct: 237 MGRVDKAMKIKAFMSRTG------CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGV 290

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD+ +Y  +++GFC AN  + A  + +E M      DVV+++ ++   CK  +  K   
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYE 350

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M  +G+ P+  T+N LID +         +KL   M     + D + Y  +++  C
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN  V+ A S++ +M+  G+ P V++YN L  G  +  +V  A+ LFDEM+   +  D  
Sbjct: 411 KNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEV 470

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           TY   + GL +   +  A  ++  + +  + LN
Sbjct: 471 TYKLIVGGLIRGKKISLACRVWDQMMERGFTLN 503



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 169/335 (50%), Gaps = 6/335 (1%)

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           F P+   F + +  LC ++R+  A  LF        +PDV +Y  +I+ LC       A 
Sbjct: 115 FVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAA 174

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            ++  + +          P+      ++ GLC  G VD A EL + +    +  + + Y 
Sbjct: 175 KVWRRLIDKG------LSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYN 228

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I GFC     ++A ++   M   G  PD+VT++++++  C+ G +D+A RL+E M   
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV P+ Y+YN L+ G+C  + +D A  + V       M DVVSYNT+I  +CK +   + 
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKG 348

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+ EM  KGI+P +VT+N L              KL DEM +  V  D   Y   +D 
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           LCK+G V  A  +FR + ++    +++SYN L++G
Sbjct: 409 LCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNG 443



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 182/362 (50%), Gaps = 8/362 (2%)

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH---RV 205
           I+   K G ++    +  ++  S     +V +   I  L   SR+  A   + +H   R 
Sbjct: 17  ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F+  P  FTY+  I+ LC   + I  L L   +       G V  P+   +NT ++ LC+
Sbjct: 77  FSLLP--FTYSRFISALCSAPNNI-NLPLIHSLLLDMDSLGFV--PDIWAFNTYLNLLCR 131

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +  ++ A ELF  M  +  +PDVV+YT +I   C A  ++EA +++  ++D+G+ PD   
Sbjct: 132 QNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKA 191

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
              ++  LC  G++D A  L+  +I  GV  N+  YN LIDG+C   ++D A K+   M 
Sbjct: 192 CVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMS 251

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             GC+ D+V+YN L+N+ C+   V+EA+ L   M   G++P + +YN L  G  + + V+
Sbjct: 252 RTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVD 311

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           RA  +  E  +     D  +YN  I   CK+    +  ELF  +       ++V++N LI
Sbjct: 312 RAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILI 371

Query: 506 DG 507
           D 
Sbjct: 372 DA 373



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 136/268 (50%), Gaps = 6/268 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++NIL     +    D  + L + +  +G+ PD+Y+++ L+  FCK   V    ++
Sbjct: 257 PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLM 316

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +   +++    + V++ ++I   C   R  +   LF +       PD+ T+N LI+   R
Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T V   L +EM        +   P+ + Y  ++D LCK G VD A  +F  M +  +
Sbjct: 377 EGSTHVVKKLLDEMTK------MRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGV 430

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPDV++Y +++ GFC  +   +A  LF EM  +G+ PD VT+ +I+  L +  K+  A R
Sbjct: 431 NPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACR 490

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           + + M+ RG   N +   TL++    +D
Sbjct: 491 VWDQMMERGFTLNRHLSETLVNAIQSSD 518


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 214/461 (46%), Gaps = 60/461 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +FN+L   L +++ +D  L LF+++   G  P+ +T  IL+   C+ G V     +
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +     SC   N V + +L+   C E    EA  L  +       PDV T+N+ I+ LCR
Sbjct: 208 VNNN-NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCR 266

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G  + A  +F +M   + E G+  +PN VT+N ++ G CK G +  A+ L   MK    
Sbjct: 267 AGKVMEASRIFRDM-QMDAELGLP-RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGN 324

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
              +  Y   + G     +  EA+ +  EM+ +G++P+  T++++MD LC+N  +  A  
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC----------MH--- 391
           L++LM+  GV P+T  Y+TL+ GYC   K+  A+ +   M  NGC          +H   
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444

Query: 392 ----------------------DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK---- 425
                                 D V+ N ++N  C+N ++++A  + SEM + G      
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 426 ------------------PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
                             P  +TY TL  GL ++ ++E A K F EM   ++  D+ TY+
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            FI   CK G +  A  + + +  +     + +YN LI GL
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGL 605



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 210/455 (46%), Gaps = 62/455 (13%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +NI    L +N        +   + + G+ P+ YT++I+++  C+   +S    ++  ++
Sbjct: 331 YNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMM 390

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R+   P+ V +++L+ G C+  ++ EA ++  +     C+P+ +T NTL++ L + G T+
Sbjct: 391 RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD-------- 281
            A  + ++M           +P+TVT N +++GLC+ G +DKA E+  +M          
Sbjct: 451 EAEEMLQKMNEK------CYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 282 --------------ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
                          N  PD +TYT++I G C      EAK+ FIEM+ + ++PD VT+ 
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
             +   CK GK+  A R+L+ M   G +    TYN LI G    ++I     L   M+  
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG---------- 437
           G   D+ +YN +I   C+    ++A+SL  EML KGI P V ++  L             
Sbjct: 625 GISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVA 684

Query: 438 --LFEIH----------------------QVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
             LFE+                       Q+  A +LF+     ++    + Y + I  L
Sbjct: 685 CELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARL 744

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           C+   + +A  L   + D  Y  +  S+  +IDGL
Sbjct: 745 CQDERLADANSLLYKLIDKGYGFDHASFMPVIDGL 779



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 190/412 (46%), Gaps = 52/412 (12%)

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH--GFV--VLGRILRSC 172
           LA+  H D  ++ FK L +   FP +     L N   +     H  GFV  +   +L + 
Sbjct: 88  LAQLGHVDDAITHFKSLRAQ--FPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAAR 145

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P   TF  LI  LC       A  LF K     C P+ FT   L+ GLCR G    AL
Sbjct: 146 VAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQAL 205

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
               E+ N N    +    N V YNT++   C+E   ++A+ L  +M +  + PDVVT+ 
Sbjct: 206 ----ELVNNNNSCRIA---NRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFN 258

Query: 293 SVIRGFCYANDWNEAKRLFIEM-MDQGV---QPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           S I   C A    EA R+F +M MD  +   +P+VVTF++++   CK+G M  A  L+E 
Sbjct: 259 SRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVET 318

Query: 349 M-------------IW----------------------RGVNPNTYTYNTLIDGYCLTDK 373
           M             IW                      +G+ PN YTYN ++DG C    
Sbjct: 319 MKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHM 378

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  AR L   M  NG   D V+Y+TL++ YC    V EA S+  EM+  G +P   T NT
Sbjct: 379 LSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNT 438

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           L   L++  +   A ++  +M       DT T N  ++GLC++G + +A E+
Sbjct: 439 LLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEI 490



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 28/274 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L K    +     F  + +  L PD  T+   I  FCK G++S  F V
Sbjct: 523 PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRV 582

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R+  +    T+ +LI GL + ++I E   L  + +     PD+ TYN +I  LC 
Sbjct: 583 LKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCE 642

Query: 225 TGHTIVALNLFEEMANG------------------NGEFGVVCKPNTVT----------Y 256
            G    A++L  EM +                   + +F V C+   V           Y
Sbjct: 643 GGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALY 702

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           + + + L   G + +AKELF    D  +      Y  +I   C      +A  L  +++D
Sbjct: 703 SLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLID 762

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           +G   D  +F  ++D L K G   +A  L + M+
Sbjct: 763 KGYGFDHASFMPVIDGLSKRGNKRQADELAKRMM 796



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 38/237 (16%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N L   L  N     +  L   +   G+ PDI T++ +I C C+ G+      +L 
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLH 654

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L    +PN  +F  LIK     S    A  LF +  +  C      Y+ + N L   G
Sbjct: 655 EMLDKGISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSLMFNELLAGG 713

Query: 227 HTIVALNLFE-------------------------EMANGNGE-FGVVCKP---NTVTYN 257
               A  LFE                          +A+ N   + ++ K    +  ++ 
Sbjct: 714 QLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFM 773

Query: 258 TIIDGLCKEGFVDKAKELF-----LKMKDENINPDVVTYTSVIRGFCY---ANDWNE 306
            +IDGL K G   +A EL      L+++D  ++        VI G       +DW +
Sbjct: 774 PVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYSNRKRVIPGKLLKDGGSDWQD 830


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 191/381 (50%), Gaps = 9/381 (2%)

Query: 127 LSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
           L+ F+ +   G+ P I   ++++       R      V   +L+    P+ VT+ +L+  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 187 LCAESRIMEAAALF--TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
              E R+ +AA L    + R   C P   TYN +INGL R G    A  L + M      
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-- 298

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
                K +  T+N +I G    G V+KA  L L+M++E I P VVTY ++I G   + + 
Sbjct: 299 -----KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV 353

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
             A+  F+EM   G+ PD++T++ +++  CK G + +A  L   +   G+ P+  TYN L
Sbjct: 354 EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           +DGYC    ++ AR+    M   GC  DV +Y  L+N   K +++      + EMLSKG+
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           +P    YNT       +     A +L + M    +++DT TYN F+DGLCKSG + +A  
Sbjct: 474 QPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYV 533

Query: 485 LFRAIRDSKYELNIVSYNCLI 505
           L+  +     + + ++Y CLI
Sbjct: 534 LWMKMVSDGLQPDCITYTCLI 554



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%), Gaps = 9/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS--AGLFPDIYTHSILINCFCKMGRVSHGF 162
           P + ++N L     +    D    L + + +   G  P   T++++IN   + G +    
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            ++ R +R     +A TF  LI G  A   + +A AL  +       P V TYNT+I+G+
Sbjct: 289 QLVDR-MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
            R+G+   A   F EM       G++  P+ +TYN++I+G CK G + +A  LF  +K  
Sbjct: 348 FRSGNVEAARMKFVEMR----AMGLL--PDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P V+TY  ++ G+C   D  EA+R   EM++QG QPDV T++++M+   K   +   
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
               + M+ +G+ P+ + YNT I    +      A +L   M S G   D V+YN  ++ 
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK+ ++++A  L+ +M+S G++P  +TY  L     E  ++  A  +FD M  + +   
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY  FI   C+ G +  A   F+ + +     N V+YN LI  L
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 195/439 (44%), Gaps = 42/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N++   LA+    +    L  R+  +      +T + LI  +   G V     +
Sbjct: 266 PSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK-ASAFTFNPLITGYFARGSVEKAGAL 324

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +      P  VT+ ++I G+     +  A   F + R     PD+ TYN+LING C+
Sbjct: 325 QLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCK 384

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+   AL LF ++            P+ +TYN ++DG C+ G +++A+    +M ++  
Sbjct: 385 AGNLKEALWLFGDLKRAG------LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP----------------------- 321
            PDV TYT ++ G     +    +  F EM+ +G+QP                       
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 322 ------------DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                       D VT+++ +D LCK+G +  A  L   M+  G+ P+  TY  LI  +C
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++  AR +F  M  +G     V+Y   I+ YC+  ++  A   + +ML +G++P  V
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN L   L  + +   A + F EM    ++ + YTY   IDG CK G   EA+ L+  +
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM 678

Query: 490 RDSKYELNIVSYNCLIDGL 508
                  +  ++N L  G 
Sbjct: 679 HQHGIHPDHCTHNALFKGF 697



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 177/377 (46%), Gaps = 30/377 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   + ++ + +     F  + + GL PD+ T++ LIN +CK G +     +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G + R+   P+ +T+  L+ G C    + EA     +     C+PDV TY  L+NG  +
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 225 TGHTIVALNLFEEMANGNGE---------------FGVVCKP--------------NTVT 255
             +  +    F+EM +   +                G   +               +TVT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN  +DGLCK G +  A  L++KM  + + PD +TYT +I   C      EA+ +F  M+
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+ P  VT++V +   C+ G +  A    + M+  GV PN  TYN LI   C   + +
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A + F  M   G   +  +Y  LI+  CK  + EEA+ LYSEM   GI P   T+N LF
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694

Query: 436 LGLFEIHQVERALKLFD 452
            G F+  Q + A++  +
Sbjct: 695 KG-FDEGQSKHAIQYME 710



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 2/153 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD ML +   PP   ++ +      +  +  +    F+++   G+ P+  T+++L
Sbjct: 565 EARDIFDGML-VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C+MGR +  +     +L    +PN  T+T LI G C E    EA  L+++      
Sbjct: 624 IHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI 683

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            PD  T+N L  G    G +  A+   E +  G
Sbjct: 684 HPDHCTHNALFKGF-DEGQSKHAIQYMENVVLG 715


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 212/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + +L +FDY  +        S F  L   L ++ + +  +   +++  +G+   + + + 
Sbjct: 139 DSSLEVFDYARKKGFEIDERSCFEFLLA-LKRSGNMELCVEFLRQMVDSGIEIRVCSWTA 197

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK G V     ++  ++   F P+ +T+ +L+ G      +     + +      
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +V TY  LI    R+     A  LF+EM     E      P+   Y +II+  CK G
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE------PDVYIYTSIINWNCKFG 311

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A  LF +M +  + P+  TY ++I G C A +   A+ +  +M  +GV  + V F+
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD  CK G +D+A RL  +M  +G   + +T N +  G+C +++ + A++L ++ME  
Sbjct: 372 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 431

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VVS++ LI+ YCK ++  EA  L+  M  KG  P+VVTYN       +  ++E A
Sbjct: 432 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 491

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            KL +EM+   +  DTYTY + IDG   SG V  ALELF  +       N+V+Y  +I G
Sbjct: 492 YKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISG 551

Query: 508 L 508
           L
Sbjct: 552 L 552



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     + K    V  +   +    +  ++ T+++LI  + +  ++     +
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+    P+   +TS+I   C    +  A  LF +       P+ +TY  LING C+
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A    E M N     GV    N V +NT++DG CK+G +D+A  L   M+ +  
Sbjct: 345 AGEMKAA----EMMVNDMQSKGV--DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGF 398

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  T   +  GFC +N   EAKRL + M ++GV P+VV+FS+++D  CK     +A R
Sbjct: 399 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 458

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L ++M  +G  P+  TYN  I+ YC   K++ A KL   M+  G M D  +Y +LI+   
Sbjct: 459 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 518

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            + +V+ AL L++EM   G+   VVTY  +  GL +  + + A KL+DEM +  +  D  
Sbjct: 519 ASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDG 578

Query: 465 TYNNFIDGLCKSGFVLEALE 484
            Y++ I  L K G ++  LE
Sbjct: 579 IYSSLIASLHKVGPLVSGLE 598



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 203/403 (50%), Gaps = 9/403 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPP--VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           + N  LC+ +++ +M  S     V S+  +   L K        +L   L   G  P + 
Sbjct: 170 SGNMELCV-EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVI 228

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T++ L+N + ++  V     +L  + ++    N  T+T LI+     S+I EA  LF + 
Sbjct: 229 TYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 288

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                EPDV+ Y ++IN  C+ G+   A  LF+EM     E  +V  PN  TY  +I+G 
Sbjct: 289 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMT----ERRLV--PNAYTYGALINGA 342

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G +  A+ +   M+ + ++ + V + +++ G+C     +EA RL   M  +G + D 
Sbjct: 343 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 402

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T ++I    C++ + ++A RLL  M  RGV PN  +++ LID YC       AR+LF  
Sbjct: 403 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 462

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ME  G    VV+YN  I  YCK   +EEA  L +EM  +G+ P   TY +L  G      
Sbjct: 463 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGN 522

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           V+RAL+LF+EM +  +  +  TY   I GL K G   EA +L+
Sbjct: 523 VDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLY 565


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 210/446 (47%), Gaps = 47/446 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  +   L +      V SL   + + GL P++  ++ +IN  CK    S    +
Sbjct: 149 PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDM 208

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++++S F P+ VTF ++I G C E  + EA  L  +      EP+  +Y  LI+G C 
Sbjct: 209 LNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCV 268

Query: 225 TGHTIVALNLFEEMANGNGE-----------FGVVCK-------------------PNTV 254
            G  +VA +L  EM  G G             G+V                     P+  
Sbjct: 269 RGEAMVASDLLVEMM-GRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDAN 327

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            YN +I GLCK+  +  AK L  +M ++ + PD   YT++I GF  ++  ++A+++F E 
Sbjct: 328 IYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EF 386

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           M++   PD+V ++V++   CK G M +A   +  M   G  P+ +TY TL+DGY     I
Sbjct: 387 MEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDI 446

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
             + +L   M    C  ++ +Y +LI  YC   D   A  L+++M S+G+ P VV Y  L
Sbjct: 447 SASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVL 506

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL--CKSGFV------------- 479
              LF+  +V +A   F+ M  NH   +  T +  ++GL  C+ G V             
Sbjct: 507 IGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEK 566

Query: 480 LEALELFRAIRDSKYELNIVSYNCLI 505
              L++FR +     +  I +YN +I
Sbjct: 567 SALLDVFRGLISDGLDPRISAYNAII 592



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 193/407 (47%), Gaps = 42/407 (10%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  P    +++LI+ +C+ G +  G ++LG +      P  VT+ ++I  L  +  + + 
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
            +L  + R     P+V  YNT+IN LC+      A ++  +M            P+ VT+
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSR------FNPDVVTF 224

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I G C+EG V +A +L  +     + P+ ++YT +I GFC   +   A  L +EMM 
Sbjct: 225 NTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMG 284

Query: 317 QGVQPDVVT-----------------------------------FSVIMDELCKNGKMDK 341
           +G  PD++T                                   ++V++  LCK   +  
Sbjct: 285 RGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSA 344

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  LLE M+ + V P+ + Y TLIDG+  +DK+  ARK+F  ME   C  D+V+YN +I 
Sbjct: 345 AKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIK 403

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            YCK   ++EA++  S M   G  P   TY TL  G  +   +  +L+L  +M +     
Sbjct: 404 GYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKP 463

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +TY + I G C  G    A +LF  ++      N+V Y  LI  L
Sbjct: 464 NIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSL 510



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 158/325 (48%), Gaps = 7/325 (2%)

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           +++GLC E R+ E   L        C P    YN LI+G CR G     L L  EM    
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK- 145

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
              G++  P  VTY  II  L ++G + K + L  +M+   ++P+V  Y +VI   C   
Sbjct: 146 ---GII--PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCR 200

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
             ++A  +  +M+     PDVVTF+ ++   C+ G + +A +LL   I RG+ PN  +Y 
Sbjct: 201 SASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYT 260

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            LI G+C+  +   A  L V M   G   D+++   LI+    +  V +AL +  +M  +
Sbjct: 261 PLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAER 320

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            + P    YN L  GL +   +  A  L +EM    V  D + Y   IDG  +S  + +A
Sbjct: 321 QVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDA 380

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
            ++F  + + K   +IV+YN +I G
Sbjct: 381 RKIFEFM-EEKACPDIVAYNVMIKG 404



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 144/312 (46%), Gaps = 6/312 (1%)

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  L+ +  V     D ++   ++ GLC  G       L E        +G  C P  V 
Sbjct: 65  ARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIE------ARWGEGCVPGAVF 118

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN +IDG C+ G + +   L  +M+ + I P VVTY ++I       D  + + L  EM 
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMR 178

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G+ P+V  ++ +++ LCK     +AS +L  M+    NP+  T+NT+I G+C    + 
Sbjct: 179 ARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVR 238

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A KL       G   + +SY  LI+ +C   +   A  L  EM+ +G  P ++T   L 
Sbjct: 239 EALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALI 298

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            GL    QV  AL + ++M    V  D   YN  I GLCK   +  A  L   + + K +
Sbjct: 299 HGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQ 358

Query: 496 LNIVSYNCLIDG 507
            +   Y  LIDG
Sbjct: 359 PDKFIYTTLIDG 370



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 117/251 (46%)

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            ++ GLC EG V++ + L      E   P  V Y  +I G+C   D      L  EM  +
Sbjct: 86  VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ P VVT+  I+  L + G + K   LL  M  RG++PN   YNT+I+  C       A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             +   M  +    DVV++NT+I  +C+  DV EAL L  E + +G++P  ++Y  L  G
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
                +   A  L  EM       D  T    I GL  SG V +AL +   + + +   +
Sbjct: 266 FCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPD 325

Query: 498 IVSYNCLIDGL 508
              YN LI GL
Sbjct: 326 ANIYNVLISGL 336



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 105/239 (43%)

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+ L+ +M       D  +   ++RG C      E + L      +G  P  V ++V+
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  C+ G + +   LL  M  +G+ P   TY  +I        +     L   M + G 
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             +V  YNT+IN  CK +   +A  + ++M+     P VVT+NT+  G      V  ALK
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L  E  R  +  +  +Y   I G C  G  + A +L   +    +  ++++   LI GL
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGL 301



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 46/305 (15%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  IF++M     + P + ++N++     K       ++    +  AG  PD +T++ 
Sbjct: 378 SDARKIFEFM--EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTT 435

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ + K G +S    +L  +++    PN  T+ SLI G C       A  LF K +   
Sbjct: 436 LVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEG 495

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM---------------ANG--NGEFGVV-- 248
             P+V  Y  LI  L +    I A   FE M                NG  N   G+V  
Sbjct: 496 LFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNS 555

Query: 249 -------------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                                      P    YN II  LC+   + KA +L  KM ++ 
Sbjct: 556 NRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKG 615

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD +T+ S++ GF  A +  + +        Q     +  +  + ++   +  + + S
Sbjct: 616 CLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDEFEIITKYMALFNQHVTSSVVGEVS 675

Query: 344 RLLEL 348
           R+L+L
Sbjct: 676 RILQL 680


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 204/407 (50%), Gaps = 7/407 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +++ M+R     P V + + L G L K+  +    +LF+ +   G  P+  T+ +
Sbjct: 261 DDAFSLYEEMVR-KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+   K  R +    +LG ++      + + +T+L+  LC E +I EA  +F       
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+  TY  LI+ LC+ G+   A  +  EM   +        PN VT+++II+GL K G
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS------ISPNVVTFSSIINGLVKRG 433

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
           +V KA +   +MK+  I+P+VVTY +VI G         A  ++ EM+ +GV+ +     
Sbjct: 434 WVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVD 493

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ L KNGK++KA  L   M  RGV  +   Y TLIDG   T  +  A K+   +   
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             + D V YN  IN  C     +EA S   EM S G+KP  VTYNT+        +  +A
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           LKL + M+R+ +  +  TY+  I GL ++G V +A  L   +  S +
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 11/370 (2%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL- 199
           D  +++++++ F + G ++    +L  + +     +AVT  +++ GLC + R+  AAAL 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 200 -FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYN 257
                       DV  +N+L++G C+ G    A  + E M A G G        + V YN
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVG-------VDVVGYN 213

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           +++ GLC+ G VD A+++   MK + + P+VVTYT  I  +C  N  ++A  L+ EM+ +
Sbjct: 214 SLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK 273

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           GV PDVVT S ++  LCK+G+  +A  L   M   G  PN  TY  LID      + + +
Sbjct: 274 GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             L   + S G + D++ Y  L++W CK   ++EA  ++   LS    P  VTY  L   
Sbjct: 334 LSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA 393

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L +   V+ A ++  EM    ++ +  T+++ I+GL K G+V +A +  R +++   + N
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453

Query: 498 IVSYNCLIDG 507
           +V+Y  +IDG
Sbjct: 454 VVTYGTVIDG 463



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 199/407 (48%), Gaps = 8/407 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP--DIYTHSILINCFCKMGRVSHG 161
           P    + N +   L ++   D   +L + +   G     D+   + L++ +CK+G +   
Sbjct: 134 PFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETA 193

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           F V  R+       + V + SL+ GLC    +  A  +    +    EP+V TY   I  
Sbjct: 194 FAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVE 253

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            CR      A +L+EEM       GV+  P+ VT + ++ GLCK+G   +A  LF +M+ 
Sbjct: 254 YCRRNAVDDAFSLYEEMVRK----GVL--PDVVTLSALVGGLCKDGRFSEAYALFREMEK 307

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               P+ VTY  +I     A   NE+  L  E++ +GV  D++ ++ +MD LCK GK+D+
Sbjct: 308 IGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDE 367

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A  +    +     PN  TY  LID  C    +D A ++   ME      +VV+++++IN
Sbjct: 368 AKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIIN 427

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
              K   V +A     EM  +GI P VVTY T+  G F+    E AL ++ EM    V  
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + +  ++ ++GL K+G + +A  LFR + +    L+ V+Y  LIDGL
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 214/452 (47%), Gaps = 21/452 (4%)

Query: 70  LKERCKSSGQGDINLITPNE---ALC----------IFDYMLRMHPSPPPVSSFNILFGC 116
           + ER K+ G G ++++  N     LC          + D M R     P V ++ +    
Sbjct: 196 VAERMKAQGVG-VDVVGYNSLVAGLCRAGEVDAARDMVDTMKR-DGVEPNVVTYTMFIVE 253

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
             +    D   SL++ +   G+ PD+ T S L+   CK GR S  + +   + +    PN
Sbjct: 254 YCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPN 313

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
            VT+  LI  L    R  E+ +L  +        D+  Y  L++ LC+ G    A ++F 
Sbjct: 314 HVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
              + N        PN VTY  +ID LCK G VD A+++  +M++++I+P+VVT++S+I 
Sbjct: 374 HALSDN------HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIIN 427

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G        +A     EM ++G+ P+VVT+  ++D   K    + A  +   M+  GV  
Sbjct: 428 GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEV 487

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N +  ++L++G     KI+ A  LF  M   G + D V+Y TLI+   K  ++  A  + 
Sbjct: 488 NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVG 547

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            E+  K + P  V YN     L  + + + A    +EM+   +  D  TYN  I    + 
Sbjct: 548 QELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSRE 607

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           G   +AL+L   ++ S  + N+++Y+ LI GL
Sbjct: 608 GKTAKALKLLNGMKRSSIKPNLITYSTLIVGL 639



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 179/398 (44%), Gaps = 41/398 (10%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L KN   +   +LF+ +N  G+  D   ++ LI+   K G +   F V   +    
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+AV +   I  LC   +  EA +   + +    +PD  TYNT+I    R G T  AL
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP------ 286
            L   M   +       KPN +TY+T+I GL + G V+KAK L  +M     +P      
Sbjct: 615 KLLNGMKRSS------IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHR 668

Query: 287 -----------------------------DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
                                        D+  Y +++R  CY     +A  +  EM  +
Sbjct: 669 RVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ PD +TF+ ++    K+G +D A    + M++ G++PN  T+NTL+ G     +I  +
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES 788

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             +   M+  G     ++Y+ L+  Y K  +  EA+ LY EM+ KG  P V TYN L   
Sbjct: 789 DMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISD 848

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
             ++  + +A +LF+EM+   V   + TY+  + G  K
Sbjct: 849 FSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSK 886



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 219/525 (41%), Gaps = 112/525 (21%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA  +F  M ++  +P  V+ + +L   LAK +  +  LSL   + S G+  D+  ++ 
Sbjct: 296 SEAYALFREMEKIGAAPNHVT-YCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTA 354

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++  CK G++     +    L    TPN VT+T LI  LC    +  A  + ++    +
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG----- 262
             P+V T++++INGL + G    A +   EM     E G+   PN VTY T+IDG     
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMK----ERGI--DPNVVTYGTVIDGSFKCL 468

Query: 263 ------------LC------------------KEGFVDKAKELFLKMKD----------- 281
                       LC                  K G ++KA+ LF +M +           
Sbjct: 469 GQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYT 528

Query: 282 ------------------------ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
                                   +N+ PD V Y   I   C      EA+    EM   
Sbjct: 529 TLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST 588

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G++PD VT++ ++    + GK  KA +LL  M    + PN  TY+TLI G      ++ A
Sbjct: 589 GLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKA 648

Query: 378 RKLFVSMESNG--------------CMH---------------------DVVSYNTLINW 402
           + L   M S+G              C                       D+  YNTL+  
Sbjct: 649 KYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRV 708

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C N    +A+ +  EM  +GI P  +T+N L LG F+   ++ A   +D+M  + ++ +
Sbjct: 709 LCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPN 768

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             T+N  + GL  +G + E+  +   ++    E + ++Y+ L+ G
Sbjct: 769 VATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 173/383 (45%), Gaps = 6/383 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+   CL          S  + + S GL PD  T++ +I    + G+ +    +
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + RS   PN +T+++LI GL     + +A  L  +       P   T+  ++    +
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              + + L + E M N       +C   TV YNT++  LC  G   KA  +  +M    I
Sbjct: 677 GRRSDLILEIHEWMMNAG-----LCADITV-YNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+ ++I G   +   + A   + +M+  G+ P+V TF+ ++  L   G++ ++  
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M  RG+ P+  TY+ L+ GY        A +L+  M   G +  V +YN LI+ + 
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L++EM ++G+ PT  TY+ L  G  ++       K   +M+    +    
Sbjct: 851 KVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKG 910

Query: 465 TYNNFIDGLCKSGFVLEALELFR 487
           T ++      K G   EA  L +
Sbjct: 911 TLSSISRAFSKPGMSWEARRLLK 933



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 184/417 (44%), Gaps = 16/417 (3%)

Query: 95  DYMLRMHPS--PPPVSSFNIL----FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           DYM  M      P V ++  +    F CL +    +  L ++  +   G+  + +    L
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQ----EAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N   K G++     +   +       + V +T+LI GL     +  A  +  +      
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            PD   YN  IN LC  G +  A +  EEM +         KP+ VTYNT+I    +EG 
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTG------LKPDQVTYNTMIAAQSREGK 609

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             KA +L   MK  +I P+++TY+++I G   A    +AK L  EM   G  P  +T   
Sbjct: 610 TAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRR 669

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++    +  + D    + E M+  G+  +   YNTL+   C       A  +   M   G
Sbjct: 670 VLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG 729

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D +++N LI  + K+  ++ A S Y +ML  GI P V T+NTL  GL    ++  + 
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESD 789

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            + +EM++  +     TY+  + G  K    +EA+ L+  +    +   + +YN LI
Sbjct: 790 MVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALI 846



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 13/282 (4%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           SP  ++   +L  C ++ +  D +L + + + +AGL  DI  ++ L+   C  G      
Sbjct: 661 SPTSLTHRRVLQAC-SQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
           VVL  +      P+ +TF +LI G      +  A + + +       P+V T+NTL+ GL
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779

Query: 223 ---CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
               R G + + LN  ++            +P+ +TY+ ++ G  K+    +A  L+ +M
Sbjct: 780 ESAGRIGESDMVLNEMKKRG---------IEPSNLTYDILVTGYGKQSNKVEAVRLYCEM 830

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
             +   P V TY ++I  F      ++AK LF EM ++GV P   T+ +++    K    
Sbjct: 831 VGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNG 890

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
            +  + L+ M  +G +P+  T +++   +        AR+L 
Sbjct: 891 TEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 42/224 (18%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + A   +D ML  H   P V++FN L G                 L SAG          
Sbjct: 751 DNAFSTYDQML-YHGISPNVATFNTLLGG----------------LESAG---------- 783

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
                    R+    +VL  + +    P+ +T+  L+ G   +S  +EA  L+ +     
Sbjct: 784 ---------RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKG 834

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P V TYN LI+   + G    A  LF EM N     GV+  P + TY+ ++ G  K  
Sbjct: 835 FLPKVSTYNALISDFSKVGMMSQAKELFNEMQN----RGVL--PTSCTYDILVSGWSKLR 888

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
              + ++    MK++  +P   T +S+ R F       EA+RL 
Sbjct: 889 NGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 207/476 (43%), Gaps = 81/476 (17%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK------------ 154
           + S N L  C A+    + + SLF+ L  +G  P+++T++I++N +CK            
Sbjct: 213 ILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKA 272

Query: 155 ------------------MGRVSHGFVVLG---------RILRSCFTP-NAVTFTSLIKG 186
                              G   HG    G         R LR    P N+  + ++I  
Sbjct: 273 TEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHE 332

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
            C    + EA  L    R     P  ++Y+ LI+GLC+ G    AL+L EEM   N    
Sbjct: 333 FCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN---- 388

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              KP+ VTY+++ DGLCK G  + +  +F  +  E    DV++Y ++I GF    D   
Sbjct: 389 --VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGS 446

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI---------------- 350
           A +L  EM   G  P+  TF+ ++   CK  ++DKA  +  +M+                
Sbjct: 447 ACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMAD 506

Query: 351 --------WR-----------GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
                   W            G+ PN+YTYN +I   C   K + A ++   M  N    
Sbjct: 507 EFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFP 566

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
             + YNTLI+ Y K  +  +AL LY++ML  GI P++VTY  L        +++ A  LF
Sbjct: 567 CAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLF 626

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            EM +  +  D   +   I G CK G +  A  L+  +       N+V+Y CLIDG
Sbjct: 627 KEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDG 682



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 201/442 (45%), Gaps = 41/442 (9%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           LR+   P     +N +     +N        L + + S G+ P  Y++SILI+  CK G+
Sbjct: 314 LRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQ 373

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V     ++  +++S   P+ VT++SL  GLC       + ++F        + DV +YNT
Sbjct: 374 VEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNT 433

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LING         A  L  EM   NG       PN+ T+N +I G CK   +DKA E+F 
Sbjct: 434 LINGFVLQRDMGSACKLVHEM-RMNGSV-----PNSFTFNRLIHGFCKRQRLDKALEVFT 487

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M    +  ++ T   +   F     + EA +L  E+ D G+ P+  T+++++  LCK  
Sbjct: 488 IMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQ 547

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT-------------------------- 371
           K +KA  +L +M+   V P    YNTLIDGY                             
Sbjct: 548 KTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYT 607

Query: 372 ---------DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
                     K+  A  LF  M   G + D + +  +I  +CK  D++ A +LY EM   
Sbjct: 608 MLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQW 667

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G  P VVTY  L  G F+I ++++A  LF++M+R++V  D  TY   I G    G+    
Sbjct: 668 GKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRV 727

Query: 483 LELFRAIRDSKYELNIVSYNCL 504
            E+F  ++++    N  +Y  L
Sbjct: 728 REMFNEMKENGVFPNYTAYATL 749



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 189/402 (47%), Gaps = 11/402 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N+L    A+N        +F +    GL  +I + + L+NCF +  +      +   +  
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 171 SCFTPNAVTFTSLIKGLCAES-----RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
           S  +PN  T+T ++   C  S      I++A  +  +  +    P V TY   I+GLCR 
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           G    AL L  ++   N      C      YN +I   C+ G + +A EL   M+   I+
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYC------YNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P   +Y+ +I G C      +A  L  EM+   V+P +VT+S + D LCK+G  + +  +
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
              +   G   +  +YNTLI+G+ L   +  A KL   M  NG + +  ++N LI+ +CK
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
            + +++AL +++ ML  G++  + T N +            ALKL +E++   +  ++YT
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           YN  I  LCK     +A E+   +  +      + YN LIDG
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDG 577



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 161/316 (50%), Gaps = 11/316 (3%)

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGVVCKPN 252
           +LF + +     P+VFTY  ++N  C+         + A  + EEM   NGE      P 
Sbjct: 234 SLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEM-EMNGE-----SPT 287

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
            VTY   I GLC+ G V+ A  L   ++  N   +   Y +VI  FC   + +EA  L  
Sbjct: 288 VVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLE 347

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
           +M   G+ P   ++S+++D LCK G+++KA  L+E M+   V P+  TY++L DG C + 
Sbjct: 348 DMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG 407

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
             + +  +F ++ + G  HDV+SYNTLIN +   +D+  A  L  EM   G  P   T+N
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            L  G  +  ++++AL++F  M +  V  + +T N   D   + G   EAL+L   ++D 
Sbjct: 468 RLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDL 527

Query: 493 KYELNIVSYNCLIDGL 508
               N  +YN +I  L
Sbjct: 528 GIVPNSYTYNIVIKWL 543



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 173/379 (45%), Gaps = 30/379 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + + M++ +  P  V+ ++ LF  L K+   +  LS+F  L + G   D+ +++ L
Sbjct: 376 KALDLIEEMVQSNVKPSLVT-YSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTL 434

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN F     +     ++  +  +   PN+ TF  LI G C   R+ +A  +FT       
Sbjct: 435 INGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGV 494

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEFGVVCK------------- 250
           + ++FT N + +   R GH   AL L  E+ +      +  + +V K             
Sbjct: 495 QLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWE 554

Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
                      P  + YNT+IDG  K+    KA  L+ KM    I P +VTYT +I  F 
Sbjct: 555 VLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFS 614

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
             +   EA  LF EM+ +G+ PD + F+ I+   CK G M  A  L E M   G +PN  
Sbjct: 615 NRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVV 674

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           TY  LIDGY    ++D A  LF  M+ +    D ++Y  LI  Y      +    +++EM
Sbjct: 675 TYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEM 734

Query: 420 LSKGIKPTVVTYNTLFLGL 438
              G+ P    Y TL L L
Sbjct: 735 KENGVFPNYTAYATLGLHL 753



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 40/269 (14%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           +D ++   ++    +I+ F   N   +A  +F++    G++ ++++ + +++   +  + 
Sbjct: 170 QDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQT 229

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYC---LTDKID--HARKLFVSMESNGCMHDVV 394
           +    L E +   G +PN +TY  +++ YC       ID   A ++   ME NG    VV
Sbjct: 230 EFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVV 289

Query: 395 S-----------------------------------YNTLINWYCKNKDVEEALSLYSEM 419
           +                                   YN +I+ +C+N ++ EA  L  +M
Sbjct: 290 TYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDM 349

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
            S GI PT  +Y+ L  GL +  QVE+AL L +EM +++V     TY++  DGLCKSG  
Sbjct: 350 RSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLT 409

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +L +F  +    Y+ +++SYN LI+G 
Sbjct: 410 EISLSMFHNLGAEGYKHDVISYNTLINGF 438


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 203/422 (48%), Gaps = 9/422 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-LFPDIYTHSI 147
           +A+ IF Y ++     P   ++N +   L     Y+ V  L+  +++ G  FPD  T+S 
Sbjct: 144 QAITIF-YQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSA 202

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK+GR      +L  +      P    +T LI      +    A +LF + R   
Sbjct: 203 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 262

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PDVFTY  LI GL + G    A + F EM          C+P+TV  N +I+ L K G
Sbjct: 263 CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREG------CRPDTVFMNNMINFLGKAG 316

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRG-FCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            +D A +LF +M+     P VVTY ++I+  F   +  +E    F  M + G+ P   T+
Sbjct: 317 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 376

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           S+++D  CK  +M+KA  LLE M  +G  P    Y +LID      + D A +LF  ++ 
Sbjct: 377 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 436

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
           N        Y  +I    K   +++A++++ EM   G  P V  YN L  GL     ++ 
Sbjct: 437 NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 496

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL     M+ +    D  +YN  ++GL K+G    A+E+   ++ S    ++VSYN ++ 
Sbjct: 497 ALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLG 556

Query: 507 GL 508
            L
Sbjct: 557 AL 558



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 11/356 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAA 197
           D  T+  LI+C   + +    + ++  ++R+     TP  ++   +++ L     + +A 
Sbjct: 89  DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELS--DVVRMLGNAKMVRQAI 146

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            +F + +   C+P    YN++I  L   G       L+ EM+         C P+TVTY+
Sbjct: 147 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGH-----CFPDTVTYS 201

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I   CK G  D A +L  +MK+  + P    YT +I  F   ND + A  LF EM  Q
Sbjct: 202 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 261

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
             +PDV T++ ++  L K G++D+A      M   G  P+T   N +I+      ++D A
Sbjct: 262 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 321

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            KLF  ME+  C+  VV+YNT+I    ++K    E  S +  M   GI P+  TY+ L  
Sbjct: 322 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 381

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           G  + +++E+A+ L +EM           Y + ID L K+     A ELF+ ++++
Sbjct: 382 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 437



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 45/272 (16%)

Query: 105 PPVSSFNILFGCLAKNK-HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P V ++N +   L ++K     V S F+R+  +G+ P  +T+SILI+ FCK  R+    +
Sbjct: 335 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMM 394

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---------TKHRVFA------- 207
           +L  +    F P    + SLI  L    R   A  LF         +  RV+A       
Sbjct: 395 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 454

Query: 208 -------------------CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                              C PDV+ YN L++GL RTG    AL+    M     E G  
Sbjct: 455 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ----EHG-- 508

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C P+  +YN I++GL K G   +A E+   MK   + PDVV+Y +V+    +A  + EA 
Sbjct: 509 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAS 568

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
           +L  EM   G + D++T+S I++ +   GK+D
Sbjct: 569 KLMKEMNTLGFEYDLITYSSILEAI---GKVD 597



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 6/211 (2%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD--ELCKNG 337
           K  N   D  TY ++I        + E  ++  EM+   +   VVT + + D   +  N 
Sbjct: 82  KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTELSDVVRMLGNA 139

Query: 338 KM-DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG-CMHDVVS 395
           KM  +A  +   +  R   P    YN++I       + +   +L+  M + G C  D V+
Sbjct: 140 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 199

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y+ LI+ +CK    + A+ L +EM   G++PT   Y  L    F+ +    AL LF+EMR
Sbjct: 200 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 259

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             +   D +TY   I GL K+G + EA   F
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFF 290


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 209/421 (49%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++ +C+ + M+ +   P   +   ++ G L K  + D+   L  +L   G  P+++ ++ 
Sbjct: 305 DDGICLMNEMVELGFVPTEAAVSGLVDG-LRKKGNIDSAYDLVVKLGRFGFLPNLFVYNA 363

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  CK   +    ++   +       N VT++ LI   C    +  A + F +     
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
               ++ YN+LING C+ G    A  L+ +M N   E      P   T+ T+I G CK+ 
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLE------PTATTFTTLISGYCKDL 477

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            V+KA +L+ +M ++ I P V T+T++I G C  N+  EA +LF EM+++ ++P  VT++
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           V+++  CK   MDKA  LLE M+  G+ P+TYTY  LI G C T ++  A+     +   
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + + Y+ L++ YC    + EALS   EM+ +GI   +V +  L  G  +   ++R 
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L  +M    +  D+  Y + ID   K G   ++ E    +   K   N+V+Y   ++G
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717

Query: 508 L 508
           L
Sbjct: 718 L 718



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 201/438 (45%), Gaps = 41/438 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + + +   L + + +  V  +F    +AG+ PD YT S +I   C++         
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +  + F  + VT+  LI GLC    ++EA  +    R    + DV TY TL+ G CR
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  + L  EM     E G V  P     + ++DGL K+G +D A +L +K+     
Sbjct: 301 VQQFDDGICLMNEMV----ELGFV--PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF 354

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P++  Y ++I   C   D ++A+ L+  M    +  + VT+S+++D  CK G +D A  
Sbjct: 355 LPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAES 414

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
               MI  G+    Y YN+LI+G+C    +  A  L+  M + G      ++ TLI+ YC
Sbjct: 415 YFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYC 474

Query: 405 KNKDVEEALSLY-----------------------------------SEMLSKGIKPTVV 429
           K+  VE+A  LY                                    EM+ + IKPT V
Sbjct: 475 KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV 534

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN +  G  + H +++A +L ++M  N +  DTYTY   I GLC +G V  A +    +
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL 594

Query: 490 RDSKYELNIVSYNCLIDG 507
                +LN + Y+ L+ G
Sbjct: 595 HKKNLKLNEMCYSALLHG 612



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 204/425 (48%), Gaps = 17/425 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +FD M+     P  V+ +N++     K  + D    L + +   GL PD YT+  L
Sbjct: 516 EASKLFDEMVERKIKPTEVT-YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C  GRVS     +  + +     N + +++L+ G C + R+ EA +   +      
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D+  +  LI+G  +         L ++M +         +P++V Y ++ID   KEG 
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG------LRPDSVIYTSMIDAYSKEGS 688

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             K+ E    M  E   P+VVTYT+ + G C   + + A  LF +M+   + P+ VT+  
Sbjct: 689 FKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGC 748

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L K G M +A+ L   M+ +G+  NT TYN LI G+C   ++  A K+   M  NG
Sbjct: 749 FLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENG 807

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
              D ++Y+T+I  +C++ DV  A+ L+  ML KG++P  V +N L  G      +++A 
Sbjct: 808 IFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAF 867

Query: 449 KLFDEMRRNHVAA---------DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
           +L ++M    +           D    N  + G C +G V  AL L+ ++     +L++ 
Sbjct: 868 ELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLE 927

Query: 500 SYNCL 504
            + CL
Sbjct: 928 MWKCL 932



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 207/480 (43%), Gaps = 79/480 (16%)

Query: 100 MHPSPPPVS--SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           MH    P++  +++IL     K    D   S F R+   G+   IY ++ LIN  CK G 
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +S    +  +++     P A TFT+LI G C + ++ +A  L+ +       P V+T+  
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LI GLC T     A  LF+EM           KP  VTYN +I+G CK   +DKA EL  
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERK------IKPTEVTYNVMIEGYCKAHNMDKAFELLE 557

Query: 278 KMKDENINPDVVTY-----------------------------------TSVIRGFCYAN 302
            M    + PD  TY                                   ++++ G+C   
Sbjct: 558 DMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQG 617

Query: 303 DWNEA--------------------------------KRLF---IEMMDQGVQPDVVTFS 327
              EA                                KRLF    +M DQG++PD V ++
Sbjct: 618 RLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYT 677

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D   K G   K+   L+LM+     PN  TY   ++G C   +ID A  LF  M + 
Sbjct: 678 SMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTA 737

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + V+Y   ++   K  +++EA  L+ EML KG+     TYN L  G  ++ ++  A
Sbjct: 738 NISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEA 796

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            K+  EM  N +  D  TY+  I   C+SG V  A+EL+  +     E + V++N LI G
Sbjct: 797 TKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYG 856



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 245/556 (44%), Gaps = 73/556 (13%)

Query: 8   RSFHFTSISISALRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKE---SLRLTVKDRA 64
           R      +S+S L+  FS+S         S +EN+  + T  S +     S ++   D  
Sbjct: 4   RHLRRARLSLSPLQRTFSTS--------KSTNENDTHFITHISDIVRGNLSWKIAFND-P 54

Query: 65  SLKKFLKERCKSSGQGDINLITPNE-ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
           S+   LK       Q  IN +  ++ AL  F+++          +SF IL   L +NK +
Sbjct: 55  SISSTLKPH--HVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLF 112

Query: 124 DTVLSLFKRLNSAGLFPD------IYTHS-----------ILINCFCKMGRVSHGFVVLG 166
               SL   L   G  P       + +H             L++ + +  RV    VVL 
Sbjct: 113 WPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLR 172

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L +   P   T ++++ GL    + +    +F +      +PD +T + +I  LC   
Sbjct: 173 LMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELK 232

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A      M +   +  +V      TYN +I GLCK G V +A E+   ++++ +  
Sbjct: 233 DFCRAKEKILWMESNRFDLSIV------TYNVLIHGLCKGGGVLEALEVRKSLREKGLKE 286

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           DVVTY +++ GFC    +++   L  EM++ G  P     S ++D L K G +D A  L+
Sbjct: 287 DVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLV 346

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES-------------------- 386
             +   G  PN + YN LI+  C  + +D A  L+ +M S                    
Sbjct: 347 VKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKR 406

Query: 387 ---------------NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
                          +G    +  YN+LIN +CK  D+  A  LY++M+++G++PT  T+
Sbjct: 407 GMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTF 466

Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
            TL  G  +  QVE+A KL+ EM    +A   YT+   I GLC +  + EA +LF  + +
Sbjct: 467 TTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVE 526

Query: 492 SKYELNIVSYNCLIDG 507
            K +   V+YN +I+G
Sbjct: 527 RKIKPTEVTYNVMIEG 542


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 220/438 (50%), Gaps = 24/438 (5%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL--NSAGLFP-- 140
           + P+ AL +F    R+ PS P + S   L   LA+ + +    +L   L  ++  LFP  
Sbjct: 82  LDPDAALHLF----RLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHL 137

Query: 141 -DIY--------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
            ++Y        +  +L+      G++S    V   + +    P+  +   L+  L    
Sbjct: 138 AEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG 197

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
               AA ++ + R+    PD FT   +    CR G    A+   EEM       G+  + 
Sbjct: 198 DPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEME------GMGLEV 251

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N V Y+ ++D  C  G+ + A+ +   ++ + ++P+VVTYT +++G+C      EA+R+ 
Sbjct: 252 NLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVV 311

Query: 312 IEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
            EM + G +  D V + ++++  C+ G+MD A+R+   M   G++ N + YNT+I+G C 
Sbjct: 312 KEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCK 371

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +++  +K+   ME  G   D  SYNTLI+ YC+   + +A  +   M+  G+  T +T
Sbjct: 372 LGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLT 431

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YNTL  G   +H ++ AL+L+  M +  VA +  + +  +DGL K+G   +AL L++   
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 491 DSKYELNIVSYNCLIDGL 508
                 N++++N +I+GL
Sbjct: 492 ARGLAKNVITFNTVINGL 509



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 207/420 (49%), Gaps = 6/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL +FD M ++    P + S N L   L ++        ++ ++  AG+ PD +T +I
Sbjct: 165 SSALNVFDGMGKV-GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAI 223

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +   +C+ GRV+     +  +       N V + +++   C      +A  +    +   
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY  L+ G C+ G    A  + +EM    G+  V    + V Y  +I+G C+ G
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKE-TGDIVV----DEVAYGMMINGYCQRG 338

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  +  +M+D  I+ ++  Y ++I G C      E +++  EM D G++PD  +++
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  C+ G M KA  +  +M+  G+   T TYNTL+ G+C    ID A +L+  M   
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + +S +TL++   K    E+AL+L+ E L++G+   V+T+NT+  GL +I ++  A
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L D M+      D+ TY    DG CK G +  A  L   +    +  ++  +N  I G
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 192/379 (50%), Gaps = 7/379 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ +  C       +    + + L   GL P++ T+++L+  +CK GR+     V+  +
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314

Query: 169 LRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
             +     + V +  +I G C   R+ +A  +  + R      ++F YNT+INGLC+ G 
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGR 374

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 + +EM +      V  +P+  +YNT+IDG C+EG + KA E+   M    +   
Sbjct: 375 MEEVQKVLQEMED------VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            +TY ++++GFC  +  ++A RL+  M+ +GV P+ ++ S ++D L K GK ++A  L +
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
             + RG+  N  T+NT+I+G C   ++  A +L   M+   C  D ++Y TL + YCK  
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  A  L ++M   G  P+V  +N+   G F   Q  +   +  EM    ++ +  TY 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 468 NFIDGLCKSGFVLEALELF 486
             I G CK G + EA  L+
Sbjct: 609 ALIAGWCKEGNLHEACNLY 627



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 198/412 (48%), Gaps = 32/412 (7%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L          D  L L+  +   G+ P+  + S L++   K G+      +    
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L      N +TF ++I GLC   R+ EA  L  + +   C PD  TY TL +G C+ G  
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A +L  +M +     G    P+   +N+ I G        K  ++  +M    ++P++
Sbjct: 551 GTATHLMNKMEH----LGFA--PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY ++I G+C   + +EA  L+ EM++ G+ P+V   S +M    K GK+D+A+ +L+ 
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664

Query: 349 MI------------------------WRGVNPNTYT--YNTLIDGYCLTDKIDHARKLFV 382
           ++                            NP++    +N +I G C + +I  A+ LF 
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           S+ +   + D  +Y++LI+    +  ++EA SL   MLS G+ P ++TYN+L  GL +  
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
           ++ RA+ LF++++   ++ +  TYN  ID  CK G   EA +L + + +  Y
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY 836



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 212/459 (46%), Gaps = 69/459 (15%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N +   L K    + V  + + +   G+ PD Y+++ LI+ +C+ G +   F +   ++
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R+      +T+ +L+KG C+   I +A  L+         P+  + +TL++GL + G T 
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481

Query: 230 VALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
            ALNL++E +A G  +       N +T+NT+I+GLCK G + +A+EL  +MK+    PD 
Sbjct: 482 QALNLWKETLARGLAK-------NVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDS 534

Query: 289 VTYTSVIRGFC-----------------------------------YANDWNEAKRLFIE 313
           +TY ++  G+C                                    A  W++   +  E
Sbjct: 535 LTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSE 594

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G+ P++VT+  ++   CK G + +A  L   M+  G+NPN +  + L+  +    K
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654

Query: 374 IDHA----RKLF---------------------VSMESNGCMHDV-VSYNTLINWYCKNK 407
           +D A    +KL                      V   ++G  H   V +N +I   CK+ 
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + +A SL+  + +K   P   TY++L  G      ++ A  L D M    +  +  TYN
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           + I GLCKSG +  A+ LF  ++      N ++YN LID
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 156/350 (44%), Gaps = 34/350 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  FN         K +  V  +   +++ GL P++ T+  LI  +CK G +     +
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   PN    ++L+     E ++ EA  +  K       P        I+ +  
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              TI         A+GN           V +N II GLCK G +  AK LF  ++++  
Sbjct: 687 VVDTI---------ADGNPHSA------NVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY+S+I G   +   +EA  L   M+  G+ P+++T++ ++  LCK+GK+ +A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   +  +G++PN  TYNTLID YC   K   A KL   M   G M              
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYM-------------- 837

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
                EEA+ L  +M+   + P  +TY TL  G  +   +E   KL+DEM
Sbjct: 838 -----EEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 48/300 (16%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  L     K  +     +L+  + + G+ P+++  S L++CF K G+V    +V
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661

Query: 165 LGRILRSCFTPNA--------------------------VTFTSLIKGLCAESRIMEAAA 198
           L +++     P                            V +  +I GLC   RI +A +
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS 721

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           LF   R     PD FTY++LI+G   +G    A +L + M +          PN +TYN+
Sbjct: 722 LFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG------LTPNIITYNS 775

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +I GLCK G + +A  LF K++ + I+P+ +TY ++I  +C      EA +L  +M+++G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835

Query: 319 ----------------VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
                           V P+ +T+  ++    K+G M++ S+L + M  RG+ P  +  N
Sbjct: 836 YMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 200/401 (49%), Gaps = 11/401 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           ++L    A N  ++     FKR    G      +   L+    K  R +    V   ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR---TGH 227
               PN  TF  +I  LC   ++ +A  +    +V+ C P+V +YNTLI+G C+    G 
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  + +EM   +        PN  T+N +IDG  K+  +  + ++F +M D+++ P+
Sbjct: 277 MYKADAVLKEMVEND------VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V++Y S+I G C     +EA  +  +M+  GVQP+++T++ +++  CKN  + +A  +  
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +  +G  P T  YN LID YC   KID    L   ME  G + DV +YN LI   C+N 
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++E A  L+ ++ SKG+ P +VT++ L  G     +  +A  L  EM +  +     TYN
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 468 NFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDG 507
             + G CK G +  A  +   + ++ +  +N+ SYN L+ G
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 172/338 (50%), Gaps = 11/338 (3%)

Query: 98  LRMHPSPPPVSSFNILFGC---LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           ++++   P V S+N L      L  N       ++ K +    + P++ T +ILI+ F K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
              +     V   +L     PN +++ SLI GLC   +I EA ++  K      +P++ T
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YN LING C+      AL++F  +  G G       P T  YN +ID  CK G +D    
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSV-KGQGAV-----PTTRMYNMLIDAYCKLGKIDDGFA 422

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L  +M+ E I PDV TY  +I G C   +   AK+LF ++  +G+ PD+VTF ++M+  C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC 481

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH-DV 393
           + G+  KA+ LL+ M   G+ P   TYN ++ GYC    +  A  +   ME    +  +V
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
            SYN L+  Y +   +E+A  L +EML KG+ P  +TY
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 205/394 (52%), Gaps = 12/394 (3%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++   L +N+  D V  ++K +    + P+++T +++IN  CK G+++    V+  +   
Sbjct: 194 LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252

Query: 172 CFTPNAVTFTSLIKGLC---AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
             +PN V++ +LI G C      ++ +A A+  +       P++ T+N LI+G  +  + 
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             ++ +F+EM + +       KPN ++YN++I+GLC  G + +A  +  KM    + P++
Sbjct: 313 PGSMKVFKEMLDQD------VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TY ++I GFC  +   EA  +F  +  QG  P    +++++D  CK GK+D    L E 
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ P+  TYN LI G C    I+ A+KLF  + S G + D+V+++ L+  YC+  +
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGE 485

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN-HVAADTYTYN 467
             +A  L  EM   G+KP  +TYN +  G  +   ++ A  +  +M +   +  +  +YN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             + G  + G + +A  L   + +     N ++Y
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 135/263 (51%), Gaps = 10/263 (3%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKP       ++  L KE      + ++ +M    I P+V T+  VI   C     N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCK---NGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
            +  +M   G  P+VV+++ ++D  CK   NGKM KA  +L+ M+   V+PN  T+N LI
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DG+   D +  + K+F  M       +V+SYN+LIN  C    + EA+S+  +M+S G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P ++TYN L  G  +   ++ AL +F  ++       T  YN  ID  CK G + +   L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
              +       ++ +YNCLI GL
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGL 446



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 9/251 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M+     P  ++ +N L     KN      L +F  +   G  P    +++
Sbjct: 348 SEAISMRDKMVSAGVQPNLIT-YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ +CK+G++  GF +   + R    P+  T+  LI GLC    I  A  LF +     
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ T++ L+ G CR G +  A  L +EM+    + G+  KP  +TYN ++ G CKEG
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMS----KMGL--KPRHLTYNIVMKGYCKEG 519

Query: 268 FVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
            +  A  +  +M K+  +  +V +Y  +++G+       +A  L  EM+++G+ P+ +T+
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

Query: 327 SVIMDELCKNG 337
            ++ +E+   G
Sbjct: 580 EIVKEEMVDQG 590


>gi|356507504|ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 195/398 (48%), Gaps = 21/398 (5%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V SF+ +F  L   K  D    LF  +   G  PD+  +S+LIN +CK+GR+    
Sbjct: 9   SVPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAI 68

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             L  + R         ++SLI G  +  R  EA A + +       PDV  Y  LI GL
Sbjct: 69  SFLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGL 128

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
              G    A  +  EM     + G+V  P+ V YN II GLC  G +D+A+ L L++ + 
Sbjct: 129 SSEGRVGEAAKMLGEMI----QIGLV--PDAVCYNEIIKGLCDVGLLDRARSLQLEISEH 182

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
               +V T+T +I   C      +A+ +F +M   G  P +VTF+ +MD LCK GK+++A
Sbjct: 183 QGFHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEA 242

Query: 343 SRLLELMIWRGVNPNTY-----TYNTLIDGYCLTDKIDH---------ARKLFVSMESNG 388
             LL  M   G +P+ +       + ++D   L  K++          A KL + +  +G
Sbjct: 243 HLLLYKMEI-GRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSG 301

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            M D+V+YN LIN +CK  ++  AL L+ +M +KG+ P  VTY TL  GLF + + E A 
Sbjct: 302 VMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAF 361

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           K+   M ++        Y   +  LC+   V +A  L+
Sbjct: 362 KIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLY 399



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 54/347 (15%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V +++ + +GLC       A  LF  M     E G   +P+ + Y+ +I+G CK G +
Sbjct: 11  PSVISFSAIFSGLCHVKRADEAHRLFNVMK----ERGF--QPDLICYSVLINGYCKLGRL 64

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A      ++ + +   +  Y+S+I GF  A  +NEA   +  M  +G+ PDVV ++++
Sbjct: 65  EEAISFLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTIL 124

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  L   G++ +A+++L  MI  G+ P+   YN +I G C    +D AR L + +  +  
Sbjct: 125 IRGLSSEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQG 184

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER--- 446
            H+V ++  +I   CK    E+A  ++++M   G  P++VT+N L  GL +  ++E    
Sbjct: 185 FHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHL 244

Query: 447 ---------------------------------------------ALKLFDEMRRNHVAA 461
                                                        A KL  ++  + V  
Sbjct: 245 LLYKMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMP 304

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D  TYN  I+G CK+  +  AL+LF+ +++     N V+Y  LIDGL
Sbjct: 305 DIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGL 351



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 15/274 (5%)

Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
           L  +L  +G+ PDI T+++LIN FCK   ++    +   +     +PN VT+ +LI GL 
Sbjct: 293 LLIQLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLF 352

Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF-EEMANGNGEFGV 247
              R  +A  +        CEP    Y  L+  LCR      A +L+ E + N  G    
Sbjct: 353 RVGREEDAFKIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGR--- 409

Query: 248 VCKPNTVTY--NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
             + N++       + G  ++ F     EL  + +D  + P    YT ++ GFC A   N
Sbjct: 410 --EDNSINALEECFVRGEVEQAF-RGLLELDFRFRDFALAP----YTILLIGFCQAEKVN 462

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA  +F  +    +  +  +   ++  L +NG++D A  +    + +G    +     L+
Sbjct: 463 EALLIFTVLDKFNININPASCVYLIRGLSENGRLDDAVNIFVYTLDKGFKLKSSVCEQLL 522

Query: 366 DGYCLTDKIDHARKLFVSMESNG-CMHDVVSYNT 398
                 DK + A  L   M+S G C++ +   NT
Sbjct: 523 K-ILSQDKKECAIDLVPRMKSAGYCLNGLFLQNT 555



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 20/264 (7%)

Query: 59  TVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGC 116
            V D  +L+K +++ C++            + L  +  ++++  S   P + ++N+L   
Sbjct: 267 QVLDSVALQKKVEQMCEAG-----------QLLDAYKLLIQLAGSGVMPDIVTYNVLING 315

Query: 117 LAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPN 176
             K  + +  L LFK + + GL P+  T+  LI+   ++GR    F +   +L+    P+
Sbjct: 316 FCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKHGCEPS 375

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE 236
              + +L+  LC + R+ +A +L+ ++       +  + N L     R G    A     
Sbjct: 376 FEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGREDNSINALEECFVR-GEVEQAFRGLL 434

Query: 237 EMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIR 296
           E+     +F +        Y  ++ G C+   V++A  +F  +   NIN +  +   +IR
Sbjct: 435 ELDFRFRDFAL------APYTILLIGFCQAEKVNEALLIFTVLDKFNININPASCVYLIR 488

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQ 320
           G       ++A  +F+  +D+G +
Sbjct: 489 GLSENGRLDDAVNIFVYTLDKGFK 512


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 212/420 (50%), Gaps = 8/420 (1%)

Query: 86  TPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTH 145
           TP  AL + D M      P  V  +N L     +    D    +   +  AG+ P++ T+
Sbjct: 185 TP-AALSVADRM-TAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +  I  +C+   V   F +   ++R+    + VT ++L+ GLC + R  EA ALF +   
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P+  TY TLI+ L + G     L+L  EM +     GVV   + VTY  ++D L K
Sbjct: 303 VGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLVTYTALMDWLGK 356

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           +G  D+ K+       +N++ + VTYT +I   C A++ +EA+++ +EM ++ + P+VVT
Sbjct: 357 QGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           FS +++   K G +DKA+    +M  RG+NPN  TY TLIDG+      D A +++  M 
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   +    ++L+N   +N  +EEA++L+ +    G+    V Y TL  GLF+   + 
Sbjct: 477 CEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A K   E+   ++  D   YN FI+ LC  G   EA  +   +R+   + +  +YN +I
Sbjct: 537 TAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMI 596



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 217/487 (44%), Gaps = 39/487 (8%)

Query: 47  TTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALC-----------IFD 95
            T+     ++R    D ASL   L   C+      + L+ P  AL            I  
Sbjct: 57  ATSGLAAAAIRFRPADPASLNALLYSHCR------LRLLRPAIALLRSSRPTTVAYNILL 110

Query: 96  YMLRMHPSPPPV-------------SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP-D 141
             L  H   P V              + N L   L +N   D   +L  R    G+   D
Sbjct: 111 AALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALD 168

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
           +   + LI  +C++G       V  R+       + V + +L+ G C   ++  A  +  
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228

Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
             +    +P+V TY   I   CRT     A +L+E M       GV+   + VT + ++ 
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVA 282

Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
           GLC++G   +A  LF +M      P+ VTY ++I     A    E   L  EM+ +GV  
Sbjct: 283 GLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342

Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
           D+VT++ +MD L K GK D+    L   +   ++ N  TY  LID  C    +D A ++ 
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
           + ME      +VV+++++IN + K   +++A      M  +GI P VVTY TL  G F+ 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
              + AL+++ +M    V  + +  ++ ++GL ++G + EA+ LF+    S   L+ V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 502 NCLIDGL 508
             LIDGL
Sbjct: 523 TTLIDGL 529



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 191/395 (48%), Gaps = 6/395 (1%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L +N   +  ++LFK  + +GL  D   ++ LI+   K G +   F     ++   
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
             P+AV +   I  LC   +  EA ++ T+ R    +PD  TYNT+I   CR G T  AL
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
            L  EM   +       KPN +TYNT++ GL   G V+KAK L  +M     +P  +T+ 
Sbjct: 610 KLLHEMKMSS------IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            V++    +   +    +   MM+ G+  D+  ++ ++  LC +G   KA+ +LE M+  
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ P+T T+N LI G+C +  +D+A   +  M       ++ ++NTL+        + EA
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            ++  EM   G++P  +TY+ L  G  +      A++L+ EM          TYN  I  
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             K+G + +A ELF+ ++         +Y+ L+ G
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 190/402 (47%), Gaps = 10/402 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++ +L   L K  + D    +   +    + P++ T S +IN F K G +         +
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF--ACEPDVFTYNTLINGLCRTG 226
                 PN VT+ +LI G        + AAL   H +     E + F  ++L+NGL + G
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQG--QDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNG 498

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ LF++ A+G+G        + V Y T+IDGL K G +  A +   ++ D N+ P
Sbjct: 499 KIEEAMALFKD-ASGSG-----LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLP 552

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V Y   I   C    + EAK +  EM + G++PD  T++ ++   C+ G+  KA +LL
Sbjct: 553 DAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M    + PN  TYNTL+ G   T  ++ A+ L   M S G     +++  ++    ++
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQS 672

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
           + ++  L ++  M++ G+   +  YNTL   L       +A  + +EM  + +A DT T+
Sbjct: 673 RRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF 732

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           N  I G CKS  +  A   +  +       NI ++N L+ GL
Sbjct: 733 NALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 206/464 (44%), Gaps = 20/464 (4%)

Query: 49  TSKLKESLRLTVKDRASLKK-----FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPS 103
           T ++K++LR  + D  SL        +   CK+           +EA  +   M     S
Sbjct: 360 TDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAH--------NVDEAEQVLLEMEEKSIS 411

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V +F+ +     K    D      + +   G+ P++ T+  LI+ F K         
Sbjct: 412 PN-VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           V   +L      N     SL+ GL    +I EA ALF          D   Y TLI+GL 
Sbjct: 471 VYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A    +E+ + N        P+ V YN  I+ LC  G   +AK +  +M++  
Sbjct: 531 KAGDMPTAFKFGQELMDRN------MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMG 584

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + PD  TY ++I   C   +  +A +L  EM    ++P+++T++ ++  L   G ++KA 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            LL  M+  G +P++ T+  ++     + ++D    +   M + G   D+  YNTL+   
Sbjct: 645 YLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C +    +A  +  EML  GI P  +T+N L LG  +   ++ A   + +M   +++ + 
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            T+N  + GL   G + EA  +   +  S  E N ++Y+ L+ G
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTG 808



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 167/383 (43%), Gaps = 6/383 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N+   CL     +    S+   + + GL PD  T++ +I   C+ G  +    +
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  S   PN +T+ +L+ GL     + +A  L  +       P   T+  ++    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +    V L++ E M N           +   YNT++  LC  G   KA  +  +M    I
Sbjct: 672 SRRLDVILDIHEWMMNAG------LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +T+ ++I G C ++  + A   + +M+ Q + P++ TF+ ++  L   G++ +A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M   G+ PN  TY+ L+ G+        A +L+  M   G +  V +YN LI+ + 
Sbjct: 786 VLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   + +A  L+ +M  +G+ PT  TY+ L  G   I       K   +M+    +    
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKG 905

Query: 465 TYNNFIDGLCKSGFVLEALELFR 487
           T +       K G   +A  L +
Sbjct: 906 TLSFICRAFSKPGMTWQAQRLLK 928



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 7/268 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           + + M+    SP  ++   +L  C ++++  D +L + + + +AGL  DI  ++ L+   
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQAC-SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           C  G      VVL  +L S   P+ +TF +LI G C  S +  A A + +       P++
Sbjct: 705 CYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNI 764

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            T+NTL+ GL   G    A  +  EM     E      PN +TY+ ++ G  K+    +A
Sbjct: 765 ATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE------PNNLTYDILVTGHGKQSNKVEA 818

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L+ +M  +   P V TY ++I  F  A    +AK LF +M  +GV P   T+ +++  
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYT 360
             +     +  + L+ M  +G +P+  T
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGT 906


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 208/416 (50%), Gaps = 9/416 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F++M R+H   P + +  +L   LAK +  + V  ++K++   G+ P+I+  ++
Sbjct: 144 QDAIQVFEHM-RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNV 202

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G V     +L  +      P+  T+ +LI   C +    EA  +  +     
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ TYN+LI G CR G    AL LF E+   NG       PN VTY T+IDG C+  
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREI---NG-----ATPNHVTYTTLIDGYCRVN 314

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  L   M+ E ++P VVTY S++R  C      +A RL  EM ++ V+PD VT +
Sbjct: 315 DLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCN 374

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  CK G M  A ++ + M+  G+ P+ +T+  LI G+C   ++D A++    M   
Sbjct: 375 TLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA 434

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G      +Y+ L++ Y    + E  + L  E+  KG+   +  Y  L   L +I ++E A
Sbjct: 435 GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 494

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            ++F  M+   +  D+  Y +      K+G  + A ++   +   +  + +  Y C
Sbjct: 495 ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRC 550



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 205/415 (49%), Gaps = 13/415 (3%)

Query: 93  IFDYMLRMHPSP---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           + + ++R+H  P     + S+ ++F   A ++     + +F+ +   G  P ++  ++L+
Sbjct: 112 VLNAVVRIHDDPDSNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLL 169

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N   K    +  + V  +++R    PN   F  LI   C    + +A  L  +       
Sbjct: 170 NSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIF 229

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD+FTYNTLI+  C+ G    AL + + M  G    GV   P+ VTYN++I G C+EG +
Sbjct: 230 PDLFTYNTLISLYCKKGMHYEALGIQDRMERG----GV--SPDIVTYNSLIYGFCREGRM 283

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  LF ++      P+ VTYT++I G+C  ND  EA RL   M  +G+ P VVT++ I
Sbjct: 284 REALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSI 341

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           + +LC+ GK+  A+RLL  M  R V P+  T NTLI+ YC    +  A K+   M   G 
Sbjct: 342 LRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGL 401

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D  ++  LI+ +CK  +V+ A     EML  G  P+  TY+ L    ++    E  ++
Sbjct: 402 KPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIR 461

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           L DE+ R  +  D   Y   I  LCK   +  A  +F  ++    + + V Y  L
Sbjct: 462 LPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSL 516



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 177/376 (47%), Gaps = 8/376 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  FN+L     K+   +    L   + S  +FPD++T++ LI+ +CK G       +
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI 254

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+ R   +P+ VT+ SLI G C E R+ EA  LF +  +    P+  TY TLI+G CR
Sbjct: 255 QDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCR 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L E M            P  VTYN+I+  LC+EG +  A  L  +M +  +
Sbjct: 313 VNDLEEALRLREVMEVEG------LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VT  ++I  +C   D   A ++  +M++ G++PD  TF  ++   CK  ++D A  
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M+  G +P+  TY+ L+D Y   D  +   +L   +   G   D+  Y  LI   C
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +E A  +++ M  KG+K   V Y +L    F+  +   A  + DEM +  +     
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLK 546

Query: 465 TYNNFIDGLCKSGFVL 480
            Y  F       G +L
Sbjct: 547 IYRCFSASYAGDGSIL 562



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 9/319 (2%)

Query: 189 AESRI-MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           A SR+  +A  +F   RV   +P +     L+N L +   T +   ++++M       GV
Sbjct: 138 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV----RVGV 193

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           V  PN   +N +I   CK G V+KA++L  +M+   I PD+ TY ++I  +C      EA
Sbjct: 194 V--PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +   M   GV PD+VT++ ++   C+ G+M +A RL   +   G  PN  TY TLIDG
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDG 309

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC  + ++ A +L   ME  G    VV+YN+++   C+   +++A  L +EM  + ++P 
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            VT NTL     +I  +  A+K+  +M    +  D +T+   I G CK   V  A E   
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLF 429

Query: 488 AIRDSKYELNIVSYNCLID 506
            + D+ +  +  +Y+ L+D
Sbjct: 430 EMLDAGFSPSYSTYSWLVD 448



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 138/258 (53%), Gaps = 2/258 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP+      +++ L K    +   +++ KM    + P++  +  +I   C + D  +A++
Sbjct: 159 KPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQ 218

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM  + + PD+ T++ ++   CK G   +A  + + M   GV+P+  TYN+LI G+C
Sbjct: 219 LLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFC 278

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++  A +LF   E NG   + V+Y TLI+ YC+  D+EEAL L   M  +G+ P VV
Sbjct: 279 REGRMREALRLF--REINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVV 336

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN++   L E  +++ A +L +EM    V  D  T N  I+  CK G +  A+++ + +
Sbjct: 337 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKM 396

Query: 490 RDSKYELNIVSYNCLIDG 507
            ++  + +  ++  LI G
Sbjct: 397 LEAGLKPDQFTFKALIHG 414



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 68/153 (44%)

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           + N+   + L+  Y  +     A ++F  M  +G    + +   L+N   K +       
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +Y +M+  G+ P +  +N L     +   VE+A +L +EM    +  D +TYN  I   C
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K G   EAL +   +       +IV+YN LI G
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG 276


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 205/406 (50%), Gaps = 17/406 (4%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P PP V S NIL   L   +       + + L ++G   D  +H+ L+  +C+ G +   
Sbjct: 111 PEPPAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDA 169

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             V+    R+  T N VT+T+LI G C   R+ +A  L     V    PD +TYNT++ G
Sbjct: 170 ERVV-EAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPV---APDTYTYNTVLKG 225

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC       A  L  EM   +      C PN VT+ T I   C+ G +D+A EL  +M  
Sbjct: 226 LCCAKQWEQAEELMREMIRNS------CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPK 279

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               PDV+ Y++++ GF      +EA +L   M+    +P+ V ++  +  LC  G+ ++
Sbjct: 280 YGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEE 336

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
              L+  M+ +   PN  T++TLI+  C    +++A ++   M+  G M DVVSYNT+I+
Sbjct: 337 VGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIIS 396

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            +      ++AL L   ML    KP  +++N +   L +  +   A++L  +M +     
Sbjct: 397 CFSDQARADDALKLLKSMLC---KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI 453

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  T+N  ID LC++G V +A+E+F  +   +   +IV+Y+ LI+G
Sbjct: 454 NEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLING 499



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 202/404 (50%), Gaps = 18/404 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F        +N   D  + L +++   G  PD+  +S L+N F + GRV     +
Sbjct: 249 PNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL 308

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +L     PN V + + +KGLC   R  E   L  +     C P+  T++TLIN LC+
Sbjct: 309 LNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQ 365

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ + E+M     ++G +  P+ V+YNTII     +   D A +L   M     
Sbjct: 366 NRLVEYAVEVLEQMQ----KYGYM--PDVVSYNTIISCFSDQARADDALKLLKSML---C 416

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +++ +V++  C A  W +A  L  +M+ +  + + +TF++++D LC+NG++  A  
Sbjct: 417 KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIE 476

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + ELM      P+  TY++LI+G+      + A  LF SM    C  D+ SYN  +   C
Sbjct: 477 VFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLC 533

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
                ++A  L ++M+++   P  VT+N L   L +   V RA+ ++++M +  +  D +
Sbjct: 534 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIF 593

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TYN  I+G  + G + +AL+    +     E + +SYN ++ GL
Sbjct: 594 TYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGL 634



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 177/336 (52%), Gaps = 18/336 (5%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP  ++F+ L   L +N+  +  + + +++   G  PD+ +++ +I+CF    R      
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 409

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +L     P+ ++F +++K LC   R  +A  L  K     C  +  T+N LI+ LC
Sbjct: 410 LLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLC 466

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+ +FE M          C P+ VTY+++I+G  ++G  + A +LF  M    
Sbjct: 467 QNGQVKDAIEVFELMPKYR------CMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP--- 517

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D+ +Y + ++G C A  W++A  L  +M+ +   P+ VTF++++  LC+ G +++A 
Sbjct: 518 CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAI 577

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            + E M   G+ P+ +TYN LI+GY    ++D A K   +M    C  D +SYN+++   
Sbjct: 578 DVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGL 634

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTY---NTLFL 436
           C+ +  ++A  L +EML K   P  VT+   N LF+
Sbjct: 635 CRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFI 670



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD + R  P    + S+N     L     +D    L   + +    P+  T +ILI+  C
Sbjct: 510 FD-LFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 568

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           + G V+    V  ++ +   TP+  T+ +LI G   + R+ +A    +      CEPD  
Sbjct: 569 QKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLS---TMPCEPDTI 625

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
           +YN+++ GLCR      A  L  EM   N      C PN VT+
Sbjct: 626 SYNSILKGLCRAERWKDAEKLVTEMLRKN------CTPNEVTF 662


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 205/401 (51%), Gaps = 6/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V + NI+   L K+   + V +   ++   G++PDI T++ LI+ +   G +   F ++ 
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +    F+P   T+ ++I GLC   +   A  +F +       PD  TY +L+   C+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
             +    +F +M + +    VV  P+ V +++++    + G +DKA   F  +K+  + P
Sbjct: 355 DVVETEKVFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D V YT +I+G+C     + A  L  EM+ QG   DVVT++ I+  LCK   + +A +L 
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M  R + P++YT   LIDG+C    + +A +LF  M+      DVV+YNTL++ + K 
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
            D++ A  ++++M+SK I PT ++Y+ L   L     +  A +++DEM   ++       
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           N+ I G C+SG   +       +    +  + +SYN LI G
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 205/440 (46%), Gaps = 43/440 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++N L    +     +    L   +   G  P +YT++ +IN  CK G+      V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +LRS  +P++ T+ SL+   C +  ++E   +F+  R     PD+  ++++++   R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G+   AL  F    N   E G++  P+ V Y  +I G C++G +  A  L  +M  +  
Sbjct: 388 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             DVVTY +++ G C      EA +LF EM ++ + PD  T ++++D  CK G +  A  
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M  + +  +  TYNTL+DG+     ID A++++  M S   +   +SY+ L+N  C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561

Query: 405 KNKDVEEALSLYSEMLSKGIKPTV-----------------------------------V 429
               + EA  ++ EM+SK IKPTV                                   +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNH--VAADTYTYNNFIDGLCKSGFVLEALELFR 487
           +YNTL  G      + +A  L  +M      +  D +TYN+ + G C+   + EA  + R
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681

Query: 488 AIRDSKYELNIVSYNCLIDG 507
            + +     +  +Y C+I+G
Sbjct: 682 KMIERGVNPDRSTYTCMING 701



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 191/401 (47%), Gaps = 6/401 (1%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S F++L     + +        F  L S G    I   + LI    ++G V   + V   
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           I RS    N  T   ++  LC + ++ +     ++ +     PD+ TYNTLI+     G 
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  L   M  G G       P   TYNT+I+GLCK G  ++AKE+F +M    ++PD
Sbjct: 286 MEEAFELMNAMP-GKG-----FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
             TY S++   C   D  E +++F +M  + V PD+V FS +M    ++G +DKA     
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +   G+ P+   Y  LI GYC    I  A  L   M   GC  DVV+YNT+++  CK K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            + EA  L++EM  + + P   T   L  G  ++  ++ A++LF +M+   +  D  TYN
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +DG  K G +  A E++  +   +     +SY+ L++ L
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 193/395 (48%), Gaps = 9/395 (2%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +F  MLR   SP   +  ++L     K    +T   +F  + S  + PD+   S +++ F
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE-KVFSDMRSRDVVPDLVCFSSMMSLF 385

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            + G +    +    +  +   P+ V +T LI+G C +  I  A  L  +     C  DV
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TYNT+++GLC+      A  LF EM            P++ T   +IDG CK G +  A
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTER------ALFPDSYTLTILIDGHCKLGNLQNA 499

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ELF KMK++ I  DVVTY +++ GF    D + AK ++ +M+ + + P  +++S++++ 
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC  G + +A R+ + MI + + P     N++I GYC +            M S G + D
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSK--GIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +SYNTLI  + + +++ +A  L  +M  +  G+ P V TYN++  G    +Q++ A  +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
             +M    V  D  TY   I+G      + EA  +
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 197/403 (48%), Gaps = 17/403 (4%)

Query: 62  DRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNK 121
           D  + +  L E CK   +GD+      E   +F  M R     P +  F+ +     ++ 
Sbjct: 339 DSTTYRSLLMEACK---KGDVV-----ETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSG 389

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
           + D  L  F  +  AGL PD   ++ILI  +C+ G +S    +   +L+     + VT+ 
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
           +++ GLC    + EA  LF +    A  PD +T   LI+G C+ G+   A+ LF++M   
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
                   + + VTYNT++DG  K G +D AKE++  M  + I P  ++Y+ ++   C  
Sbjct: 510 R------IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
               EA R++ EM+ + ++P V+  + ++   C++G        LE MI  G  P+  +Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623

Query: 362 NTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
           NTLI G+   + +  A  L   M  E  G + DV +YN++++ +C+   ++EA  +  +M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           + +G+ P   TY  +  G      +  A ++ DEM +   + D
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 17/202 (8%)

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWR-GVN----------------PNTYTYNTLID 366
           ++ S ++  L ++G++  A   L  MI R GV+                 N   ++ LI 
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            Y    K+  A + F  + S G    + + N LI    +   VE A  +Y E+   G+  
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            V T N +   L +  ++E+      +++   V  D  TYN  I      G + EA EL 
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
            A+    +   + +YN +I+GL
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGL 315


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 201/396 (50%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N   G L KN  +D V   +    S GL    +T+S  I+  C+  R+     +L  + 
Sbjct: 193 YNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMD 252

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R  F+P+       I  LC ++R+ +A  +  K R     PDV TY T++  LC      
Sbjct: 253 RFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFS 312

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A+ L+EEM     + G+  KP+ V    +I GLCK   V++A EL  +M   NI   V 
Sbjct: 313 EAVGLWEEMV----KMGL--KPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVS 366

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y ++I GF  A   ++A  +   M   G +P VVT++++++  C  G M+KA  L+  M
Sbjct: 367 IYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKM 426

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              GVNP+ Y+YN L+ G C T ++D A          G   D+VS N LI+ +CK K V
Sbjct: 427 ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKV 486

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           + AL L+ EM  KG++   VTY TL  GLF +     A +LF++M +  +  +   YN  
Sbjct: 487 KSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIM 546

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  LCK G +  A ++F  +   +   +IV+YN LI
Sbjct: 547 LHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLI 582



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 188/382 (49%), Gaps = 6/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + NI   CL K       L + +++   G  PD+ T++ ++ C C   R S    +
Sbjct: 258 PDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGL 317

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+ V   +LI GLC  S++ EA  L ++      E  V  YN LI+G  R
Sbjct: 318 WEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWR 377

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +   M   NG     C+P  VTYN +++  C  G ++KA+ L  KM+   +
Sbjct: 378 AGSIDKAYTIISFMRT-NG-----CEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGV 431

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPD  +Y  +++G C  +  ++A     + M+ G   D+V+ ++++D  CK  K+  A  
Sbjct: 432 NPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALE 491

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M ++G+  +  TY TLI+G       + A +LF  M       +V  YN +++  C
Sbjct: 492 LFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLC 551

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  D++ A  ++  M+ K I P +VTYNTL   L +  +   AL LF +MR   V  D+ 
Sbjct: 552 KVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSL 611

Query: 465 TYNNFIDGLCKSGFVLEALELF 486
           T+   I+GL   G    A E++
Sbjct: 612 TFKYLINGLLDEGRSTLAYEVW 633



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 154/296 (52%), Gaps = 6/296 (2%)

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FTY+  I+ LC++      + L EE+      FG    P+    N  ID LCK+  +  A
Sbjct: 226 FTYSRWISALCQSNR----IELVEELLADMDRFGF--SPDIWACNIYIDCLCKQNRLHDA 279

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++  KM+ +   PDVVTYT+V+   C    ++EA  L+ EM+  G++PDVV    ++  
Sbjct: 280 LQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFG 339

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCKN K+++A  L   M+   +  +   YN LI G+     ID A  +   M +NGC   
Sbjct: 340 LCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPG 399

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VV+YN L+N YC    +E+A +L ++M + G+ P   +YN L  GL + HQ+++A     
Sbjct: 400 VVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVS 459

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +        D  + N  ID  CK   V  ALELF+ +     + + V+Y  LI+GL
Sbjct: 460 DHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGL 515



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 184/406 (45%), Gaps = 16/406 (3%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRL-----NSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S + IL     +   +D+V+  F  +        G+  + Y   ++ NC   +    +G 
Sbjct: 156 SLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGM 215

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +   C TP   T++  I  LC  +RI     L      F   PD++  N  I+ L
Sbjct: 216 ALSKGL---CLTP--FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCL 270

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C+      AL + E+M  G G       P+ VTY T++  LC      +A  L+ +M   
Sbjct: 271 CKQNRLHDALQMVEKM-RGKGTI-----PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKM 324

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + PDVV   ++I G C  +   EA  L   M+   ++  V  ++ ++    + G +DKA
Sbjct: 325 GLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKA 384

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             ++  M   G  P   TYN L++ YC    ++ A  L   ME++G   D  SYN L+  
Sbjct: 385 YTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKG 444

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK   +++A +  S+ +  G    +V+ N L     ++ +V+ AL+LF EM    + AD
Sbjct: 445 LCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQAD 504

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TY   I+GL   G+   A ELF  +  ++ + N+  YN ++  L
Sbjct: 505 AVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHL 550



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 6/230 (2%)

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVTFSVIMDELCK 335
           L+  D  ++P VV    V+RG    +D   A R +     + G        + I+  L  
Sbjct: 78  LERLDIELDPFVVNL--VVRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFV 132

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           +G     S  L  +  +GV  +   Y  L+ GY    K D     F  M  +GC    + 
Sbjct: 133 DGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGID 192

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YN  I    KN   +     Y   LSKG+  T  TY+     L + +++E   +L  +M 
Sbjct: 193 YNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMD 252

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           R   + D +  N +ID LCK   + +AL++   +R      ++V+Y  ++
Sbjct: 253 RFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVV 302



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 76/192 (39%)

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           QGV      + +++    + GK D      + M+  G       YN  I         D 
Sbjct: 149 QGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDL 208

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             K +    S G      +Y+  I+  C++  +E    L ++M   G  P +   N    
Sbjct: 209 VEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYID 268

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
            L + +++  AL++ ++MR      D  TY   +  LC +    EA+ L+  +     + 
Sbjct: 269 CLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKP 328

Query: 497 NIVSYNCLIDGL 508
           ++V+   LI GL
Sbjct: 329 DVVACGALIFGL 340


>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
 gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
          Length = 580

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 184/352 (52%), Gaps = 22/352 (6%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EAL +++ M R +  P  + ++N +  C++K    +    + K +  +   PD + ++ 
Sbjct: 190 DEALRLYELM-RGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTR 248

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +IN FCK+G   +  V+LGR+  + + P+AV F  +I GLC  S+  EA  +        
Sbjct: 249 VINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAG 308

Query: 208 CEPDVFTY----------------NTLINGLCRTGHTIVALNLFEEMANGNGEF-----G 246
           CEPD  TY                + L+  LC+TG    A  L E++ NG+ E      G
Sbjct: 309 CEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGG 368

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
             CKP+ V Y+ +ID LC  G  D+   +   M++  + PD V YT  +  FC +   ++
Sbjct: 369 DGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDD 428

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A RL   M++ G  PDV++++ ++  LC  G+ ++A RL ++M+  G+ PN +TY  LI 
Sbjct: 429 ACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIR 488

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             C T K++ AR LF  M+ + C+ D+ +Y  LI  + +N+ V EA  L  +
Sbjct: 489 ALCSTKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQ 540



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 216/512 (42%), Gaps = 44/512 (8%)

Query: 32  RKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLIT----- 86
           ++  SS   +   Y      L  + RL+  D + L + + + C    +  ++L+      
Sbjct: 21  KQNRSSYKHDSRIYNQVVRNLAAAKRLSDID-SVLGEMMDQGCSLEPEAALDLVVCYANG 79

Query: 87  --PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
              + A  IF+  LR      P   +N++FG LAK + +  V  + + L +        T
Sbjct: 80  AMVDRAQAIFNE-LRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDST 138

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTF--TSLIKGLCAESRIMEAAALFTK 202
              L+  FCK   V      L  +          TF    LI+GLC   RI EA  L+  
Sbjct: 139 ADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYEL 198

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            R      D+FTYN +I  + + G    A  + + M   +      CKP+   Y  +I+G
Sbjct: 199 MRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESD------CKPDKFIYTRVING 252

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            CK G    A  L  +MK+    PD V +  +I G C  + ++EA  +    ++ G +PD
Sbjct: 253 FCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPD 312

Query: 323 VVTF----------------SVIMDELCKNGKMDKASRLLE-----------LMIWRGVN 355
            VT+                S +M  LCK GK++ A +LLE           L+   G  
Sbjct: 313 EVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCK 372

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
           P+   Y+ +ID  C     D    +  +ME  G   D V Y   +  +C++  +++A  L
Sbjct: 373 PDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRL 432

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
              M+  G  P V++YNTL   L    Q E A +LF  M    +  + +TY   I  LC 
Sbjct: 433 LEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCS 492

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  +  A  LF  ++ SK   ++ +Y  LI G
Sbjct: 493 TKKLEGARHLFNFMKLSKCVPDMETYKALILG 524



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 194/446 (43%), Gaps = 38/446 (8%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +   M+    S  P ++ +++  C A     D   ++F  L   G     + ++++    
Sbjct: 53  VLGEMMDQGCSLEPEAALDLVV-CYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGAL 111

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK---HRVFACE 209
            K+ R    F ++  ++   FT +  T  +L++  C ++  ++ A  F K    +     
Sbjct: 112 AKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFC-KALAVDKAVRFLKWMSSKGLQVA 170

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
              F YN LI GLC+      AL L+E M   N         +  TYN +I+ + K G V
Sbjct: 171 MSTFEYNCLIEGLCKGDRIDEALRLYELMRGNN------VPADIFTYNNMIECISKLGMV 224

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A+++   M++ +  PD   YT VI GFC   ++  A  L   M + G  PD V F  I
Sbjct: 225 EQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCI 284

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTY----------------NTLIDGYCLTDK 373
           +  LCK  K D+A  +L++ I  G  P+  TY                + L+   C T K
Sbjct: 285 IGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGK 344

Query: 374 IDHARKLFV-----SMES------NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           ++ A +L       S ES      +GC  DVV Y+ +I+  C     +E   +   M  +
Sbjct: 345 VEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEER 404

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G+KP  V Y           +++ A +L + M       D  +YN  +  LC +G   EA
Sbjct: 405 GVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEA 464

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             LF+ + ++  E N+ +Y  LI  L
Sbjct: 465 CRLFQVMVETGIEPNVFTYTQLIRAL 490



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 10/265 (3%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE--NINPDVVTYTSVIRGFCYANDW--N 305
           K ++  YN ++  L     +     +  +M D+  ++ P+      V    CYAN    +
Sbjct: 28  KHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALDLVV----CYANGAMVD 83

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
            A+ +F E+  QG +     ++VI   L K  +     R++E ++ +    +  T + L+
Sbjct: 84  RAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALV 143

Query: 366 DGYCLTDKIDHARKLFVSMESNGCM--HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
             +C    +D A +    M S G         YN LI   CK   ++EAL LY  M    
Sbjct: 144 RIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNN 203

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
           +   + TYN +   + ++  VE+A K+   M  +    D + Y   I+G CK G    A+
Sbjct: 204 VPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAV 263

Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
            L   ++++ Y  + V ++C+I GL
Sbjct: 264 VLLGRMKEAGYAPDAVVFDCIIGGL 288


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 208/403 (51%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N++   + KN     V   FK++ ++ + P++ + +ILI+  C  G++     +
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNI 197

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + R+ + P  V++ +L+   C + R   A  L         + DV TYN  I+ LCR
Sbjct: 198 LTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCR 257

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +     + ++M N       +  PN V+YNT+I+G  KEG +  A  +F +M + N+
Sbjct: 258 NSRSAQGYLVLKKMRNK------MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           +P+++TY  +I G+C   ++ EA RL   M    V+P+ VT   +++ L K+ K D A  
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE       + N  ++  +IDG C    +D A +L + M  +G   D+++++ LIN +C
Sbjct: 372 ILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFC 431

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  ++ +A  + S++  +G  P  V ++TL     ++  V   +K +  M  N   AD +
Sbjct: 432 KVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNF 491

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           T N+ +  LC++G ++EA E    I       N V+++C+I+G
Sbjct: 492 TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 213/441 (48%), Gaps = 29/441 (6%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+  +   P + S+N L     K   +   L L   +   G+  D+ T+++ I+  C+  
Sbjct: 200 MMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNS 259

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           R + G++VL ++     TPN V++ +LI G   E +I  A  +F +       P++ TYN
Sbjct: 260 RSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYN 319

Query: 217 TLINGLCRTGHTIVALNLFEEMA---------------NG---NGEFGVV---------- 248
            LING C  G+   AL L + M                NG   + +F V           
Sbjct: 320 ILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSIN 379

Query: 249 -CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
               N +++  +IDGLC+ G +D+A +L ++M  + + PD++T++ +I GFC   + N+A
Sbjct: 380 RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKA 439

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           K +  ++  +G  P+ V FS ++   CK G + +  +    M   G N + +T N+L+  
Sbjct: 440 KEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVAS 499

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   K+  A +    +   G + + V+++ +IN Y    D   A S++ +M+S G  P+
Sbjct: 500 LCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPS 559

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
             TY +L   L +      A KL  ++    +A DT +YN  I  + KSG +LEA+ LF 
Sbjct: 560 PFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE 619

Query: 488 AIRDSKYELNIVSYNCLIDGL 508
            +  +    +  +Y C++ GL
Sbjct: 620 EMIQNNILPDSYTYTCILSGL 640



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 196/405 (48%), Gaps = 7/405 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N L     K         +F  +    L P++ T++ILIN +C  G       +
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRL 337

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +  +   PN VT  +L+ GL   ++   A  +  ++ +     +  ++  +I+GLCR
Sbjct: 338 LDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCR 397

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L  EM   +G +     P+ +T++ +I+G CK G ++KAKE+  K+  E  
Sbjct: 398 NGLLDEAFQLLIEMCK-DGVY-----PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGF 451

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V ++++I   C   +  E  + +  M   G   D  T + ++  LC+NGK+ +A  
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  +   G+ PN+ T++ +I+GY        A  +F  M S G      +Y +L+   C
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLC 571

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K ++  EA  L  ++    +    ++YNTL + + +   +  A++LF+EM +N++  D+Y
Sbjct: 572 KGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 465 TYNNFIDGLCKSG-FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           TY   + GL + G  V   + L R ++     LN + Y C IDGL
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGL 676



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 177/451 (39%), Gaps = 102/451 (22%)

Query: 99   RMHPSPPPVS--SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
            ++H  P  V   S+N L   ++K+ +    + LF+ +    + PD YT++ +++   + G
Sbjct: 585  KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREG 644

Query: 157  RVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            R+   F+ LGR++ +   T N++ +T  I GL    +   A  LF +        D+   
Sbjct: 645  RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIAL 704

Query: 216  NTLINGLCRTGHTIVALNLFEEMANGN-----------------GEFGVVCK-------- 250
            N++ +G  R G    A +L  +  N N                 G+  + C         
Sbjct: 705  NSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR 764

Query: 251  ----PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                PN +TY+++I GLC  G ++   ++      E+   D +T+  +IR  C  ND ++
Sbjct: 765  SGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDK 824

Query: 307  --------------------------------AKRLFI---EMMDQGVQPDVVTFSVIMD 331
                                            ++  F+   EM+ +G  P    +  +M 
Sbjct: 825  VIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMK 884

Query: 332  ELCKNGKMDKASRLLELMIWRGVN-----------------------------------P 356
             +C+ G +  A +L + M+  G++                                   P
Sbjct: 885  RMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIP 944

Query: 357  NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
             T T+ TL+  +C  D    A  L + ME      D+V+YN LI+  C N DV  AL  Y
Sbjct: 945  TTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFY 1004

Query: 417  SEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
             E+  KG+ P + TY  L   +   H V R 
Sbjct: 1005 EEIKQKGLLPNMTTYRVLVSAISTKHYVSRG 1035



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 6/301 (1%)

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C  +   ++ LI    R G    A+N F  M           KP+  T N I+  + K  
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG------FKPSVYTCNMIMASMVKNC 154

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
                   F +M    + P+V ++  +I   C      +A  +   M   G  P +V+++
Sbjct: 155 RAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK G+   A  L+  M  +G+  +  TYN  ID  C   +      +   M + 
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + VSYNTLIN + K   +  A  +++EM+   + P ++TYN L  G       E A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           L+L D M  N V  +  T    ++GL KS     A  +      ++  LN +S+  +IDG
Sbjct: 335 LRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDG 394

Query: 508 L 508
           L
Sbjct: 395 L 395



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/314 (20%), Positives = 117/314 (37%), Gaps = 64/314 (20%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +++FNIL    ++ +   +   L+  +  +G FP+  T+  LI   C  G +  G  +
Sbjct: 734  PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD------------- 211
            L   +    T + +TF  LI+  C  + + +   L     VF    D             
Sbjct: 794  LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 212  --------VF--------------TYNTLINGLCRTGHTIVALNLFEEMA------NGNG 243
                    VF               Y T++  +CR G    A  L ++M       +   
Sbjct: 854  RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 244  EFGVV-----CK------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
            E  +V     C                   P T T+ T++   CK+    +A  L + M+
Sbjct: 914  ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973

Query: 281  DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
               +  D+V Y  +I   C   D   A   + E+  +G+ P++ T+ V++  +     + 
Sbjct: 974  HYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVS 1033

Query: 341  KASRLLELMIWRGV 354
            +   +L+ +  RG+
Sbjct: 1034 RGEIVLKDLNDRGL 1047


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 212/421 (50%), Gaps = 7/421 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + +L +FDY  +        S F  L   L ++ + +  +   +++  +G+   + + + 
Sbjct: 135 DSSLEVFDYARKKGFEIDERSCFEFLLA-LKRSGNMELCVEFLRQMVDSGIEIRVCSWTA 193

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++  CK G V     ++  ++   F P+ +T+ +L+ G      +     + +      
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            + +V TY  LI    R+     A  LF+EM     E      P+   Y +II+  CK G
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE------PDVYIYTSIINWNCKFG 307

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            + +A  LF +M +  + P+  TY ++I G C A +   A+ +  +M  +GV  + V F+
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD  CK G +D+A RL  +M  +G   + +T N +  G+C +++ + A++L ++ME  
Sbjct: 368 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 427

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   +VVS++ LI+ YCK ++  EA  L+  M  KG  P+VVTYN       +  ++E A
Sbjct: 428 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 487

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            KL +EM+   +  DTYTY + IDG   SG V  ALELF  +       N+V+Y  +I G
Sbjct: 488 YKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISG 547

Query: 508 L 508
           L
Sbjct: 548 L 548



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N L     + K    V  +   +    +  ++ T+++LI  + +  ++     +
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+    P+   +TS+I   C    +  A  LF +       P+ +TY  LING C+
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A    E M N     GV    N V +NT++DG CK+G +D+A  L   M+ +  
Sbjct: 341 AGEMKAA----EMMVNDMQSKGV--DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGF 394

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D  T   +  GFC +N   EAKRL + M ++GV P+VV+FS+++D  CK     +A R
Sbjct: 395 EIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARR 454

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L ++M  +G  P+  TYN  I+ YC   K++ A KL   M+  G M D  +Y +LI+   
Sbjct: 455 LFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGER 514

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            + +V+ AL L++EM   G+   VVTY  +  GL +  + + A KL+DEM +  +  D  
Sbjct: 515 ASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDG 574

Query: 465 TYNNFIDGLCKSGFVLEALE 484
            Y++ I  L K G ++  LE
Sbjct: 575 IYSSLIASLHKVGPLVSGLE 594



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 203/403 (50%), Gaps = 9/403 (2%)

Query: 86  TPNEALCIFDYMLRMHPSPPP--VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
           + N  LC+ +++ +M  S     V S+  +   L K        +L   L   G  P + 
Sbjct: 166 SGNMELCV-EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVI 224

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           T++ L+N + ++  V     +L  + ++    N  T+T LI+     S+I EA  LF + 
Sbjct: 225 TYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 284

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                EPDV+ Y ++IN  C+ G+   A  LF+EM     E  +V  PN  TY  +I+G 
Sbjct: 285 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMT----ERRLV--PNAYTYGALINGA 338

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           CK G +  A+ +   M+ + ++ + V + +++ G+C     +EA RL   M  +G + D 
Sbjct: 339 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 398

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
            T ++I    C++ + ++A RLL  M  RGV PN  +++ LID YC       AR+LF  
Sbjct: 399 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 458

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           ME  G    VV+YN  I  YCK   +EEA  L +EM  +G+ P   TY +L  G      
Sbjct: 459 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGN 518

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           V+RAL+LF+EM +  +  +  TY   I GL K G   EA +L+
Sbjct: 519 VDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLY 561


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 220/438 (50%), Gaps = 24/438 (5%)

Query: 85  ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL--NSAGLFP-- 140
           + P+ AL +F    R+ PS P + S   L   LA+ + +    +L   L  ++  LFP  
Sbjct: 82  LDPDAALHLF----RLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHL 137

Query: 141 -DIY--------THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAES 191
            ++Y        +  +L+      G++S    V   + +    P+  +   L+  L    
Sbjct: 138 AEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG 197

Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
               AA ++ + R+    PD FT   +    CR G    A+   EEM       G+  + 
Sbjct: 198 DPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEME------GMGLEV 251

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           N V Y+ ++D  C  G+ + A+ +   ++ + ++P+VVTYT +++G+C      EA+R+ 
Sbjct: 252 NLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVV 311

Query: 312 IEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
            EM + G +  D V + ++++  C+ G+MD A+R+   M   G++ N + YNT+I+G C 
Sbjct: 312 KEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCK 371

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             +++  +K+   ME  G   D  SYNTLI+ YC+   + +A  +   M+  G+  T +T
Sbjct: 372 LGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLT 431

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YNTL  G   +H ++ AL+L+  M +  VA +  + +  +DGL K+G   +AL L++   
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 491 DSKYELNIVSYNCLIDGL 508
                 N++++N +I+GL
Sbjct: 492 ARGLAKNVITFNTVINGL 509



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 207/420 (49%), Gaps = 6/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL +FD M ++    P + S N L   L ++        ++ ++  AG+ PD +T +I
Sbjct: 165 SSALNVFDGMGKV-GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAI 223

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +   +C+ GRV+     +  +       N V + +++   C      +A  +    +   
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY  L+ G C+ G    A  + +EM    G+  V    + V Y  +I+G C+ G
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKE-TGDIVV----DEVAYGMMINGYCQRG 338

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D A  +  +M+D  I+ ++  Y ++I G C      E +++  EM D G++PD  +++
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D  C+ G M KA  +  +M+  G+   T TYNTL+ G+C    ID A +L+  M   
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   + +S +TL++   K    E+AL+L+ E L++G+   V+T+NT+  GL +I ++  A
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +L D M+      D+ TY    DG CK G +  A  L   +    +  ++  +N  I G
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 192/379 (50%), Gaps = 7/379 (1%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +++ +  C       +    + + L   GL P++ T+++L+  +CK GR+     V+  +
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314

Query: 169 LRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
             +     + V +  +I G C   R+ +A  +  + R      ++F YNT+INGLC+ G 
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGR 374

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 + +EM +      V  +P+  +YNT+IDG C+EG + KA E+   M    +   
Sbjct: 375 MEEVQKVLQEMED------VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            +TY ++++GFC  +  ++A RL+  M+ +GV P+ ++ S ++D L K GK ++A  L +
Sbjct: 429 TLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWK 488

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
             + RG+  N  T+NT+I+G C   ++  A +L   M+   C  D ++Y TL + YCK  
Sbjct: 489 ETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            +  A  L ++M   G  P+V  +N+   G F   Q  +   +  EM    ++ +  TY 
Sbjct: 549 QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYG 608

Query: 468 NFIDGLCKSGFVLEALELF 486
             I G CK G + EA  L+
Sbjct: 609 ALIAGWCKEGNLHEACNLY 627



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 32/426 (7%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N L          D  L L+  +   G+ P+  + S L++   K G+      +    
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           L      N +TF ++I GLC   R+ EA  L  + +   C PD  TY TL +G C+ G  
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A +L  +M +     G    P+   +N+ I G        K  ++  +M    ++P++
Sbjct: 551 GTATHLMNKMEH----LGFA--PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VTY ++I G+C   + +EA  L+ EM++ G+ P+V   S +M    K GK+D+A+ +L+ 
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664

Query: 349 MI------------------------WRGVNPNTYT--YNTLIDGYCLTDKIDHARKLFV 382
           ++                            NP++    +N +I G C + +I  A+ LF 
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           S+ +   + D  +Y++LI+    +  ++EA SL   MLS G+ P ++TYN+L  GL +  
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++ RA+ LF++++   ++ +  TYN  ID  CK G   EA +L + + +   +  +++Y+
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYS 844

Query: 503 CLIDGL 508
            LI GL
Sbjct: 845 ILIYGL 850



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 218/469 (46%), Gaps = 68/469 (14%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +G  +L   ++AL ++  ML+   +P  +S   +L G L K    +  L+L+K   + GL
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG-LFKAGKTEQALNLWKETLARGL 495

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
             ++ T + +IN  CK+GR++    +L R+      P+++T+ +L  G C   ++  A  
Sbjct: 496 AKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATH 555

Query: 199 LFTK--HRVFA---------------------------------CEPDVFTYNTLINGLC 223
           L  K  H  FA                                   P++ TY  LI G C
Sbjct: 556 LMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWC 615

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---- 279
           + G+   A NL+ EM N NG       PN    + ++    KEG VD+A  +  K+    
Sbjct: 616 KEGNLHEACNLYFEMVN-NG-----MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669

Query: 280 ----------------------KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
                                  D N +   V +  +I G C +    +AK LF  + ++
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
              PD  T+S ++     +G +D+A  L ++M+  G+ PN  TYN+LI G C + K+  A
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             LF  ++S G   + ++YNTLI+ YCK     EA  L  +M+ +GI+PTV+TY+ L  G
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYG 849

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           L     +E A+KL D+M  N+V  +  TY   I G  KSG + E  +L+
Sbjct: 850 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLY 898



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 164/350 (46%), Gaps = 15/350 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  FN         K +  V  +   +++ GL P++ T+  LI  +CK G +     +
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++ +   PN    ++L+     E ++ EA  +  K       P        I+ +  
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              TI         A+GN           V +N II GLCK G +  AK LF  ++++  
Sbjct: 687 VVDTI---------ADGNPHSA------NVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY+S+I G   +   +EA  L   M+  G+ P+++T++ ++  LCK+GK+ +A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   +  +G++PN  TYNTLID YC   K   A KL   M   G    V++Y+ LI   C
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLC 851

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
               +EEA+ L  +M+   + P  +TY TL  G  +   +E   KL+DEM
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 901



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 161/323 (49%), Gaps = 15/323 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + ++  L     K  +     +L+  + + G+ P+++  S L++CF K G+V    +V
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L +++     P     T  I  +   S +++  A    H           +N +I GLC+
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKI---SHVVDTIADGNPHSANV------MWNVIIFGLCK 712

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           +G    A +LFE + N          P+  TY+++I G    G +D+A  L   M    +
Sbjct: 713 SGRIADAKSLFESLRNKR------FLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+++TY S+I G C +   + A  LF ++  +G+ P+ +T++ ++DE CK GK  +A +
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+  G+ P   TY+ LI G C    ++ A KL   M  N    + ++Y TLI+ Y 
Sbjct: 827 LKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYI 886

Query: 405 KNKDVEEALSLYSEMLSKGIKPT 427
           K+ ++EE   LY EM  +G+ PT
Sbjct: 887 KSGNMEEISKLYDEMHIRGLLPT 909



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 6/217 (2%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           +++I   CK GR++    +   +    F P+  T++SLI G  A   I EA +L      
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
               P++ TYN+LI GLC++G    A+NLF ++ +          PN +TYNT+ID  CK
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG------ISPNGITYNTLIDEYCK 817

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           EG   +A +L  KM +E I P V+TY+ +I G C      EA +L  +M++  V P+ +T
Sbjct: 818 EGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYIT 877

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           +  ++    K+G M++ S+L + M  RG+ P  +  N
Sbjct: 878 YCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 208/416 (50%), Gaps = 9/416 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A+ +F++M R+H   P + +  +L   LAK +  + V  ++K++   G+ P+I+  ++
Sbjct: 144 QDAIQVFEHM-RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNV 202

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G V     +L  +      P+  T+ +LI   C +    EA  +  +     
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD+ TYN+LI G CR G    AL LF E+   NG       PN VTY T+IDG C+  
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREI---NG-----ATPNHVTYTTLIDGYCRVN 314

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++A  L   M+ E ++P VVTY S++R  C      +A RL  EM ++ V+PD VT +
Sbjct: 315 DLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCN 374

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++  CK G M  A ++ + M+  G+ P+ +T+  LI G+C   ++D A++    M   
Sbjct: 375 TLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA 434

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G      +Y+ L++ Y    + E  + L  E+  KG+   +  Y  L   L +I ++E A
Sbjct: 435 GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 494

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
            ++F  M+   +  D+  Y +      K+G  + A ++   +   +  + +  Y C
Sbjct: 495 ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRC 550



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 205/415 (49%), Gaps = 13/415 (3%)

Query: 93  IFDYMLRMHPSP---PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           + + ++R+H  P     + S+ ++F   A ++     + +F+ +   G  P ++  ++L+
Sbjct: 112 VLNAVVRIHDDPDSNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLL 169

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N   K    +  + V  +++R    PN   F  LI   C    + +A  L  +       
Sbjct: 170 NSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIF 229

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PD+FTYNTLI+  C+ G    AL + + M  G    GV   P+ VTYN++I G C+EG +
Sbjct: 230 PDLFTYNTLISLYCKKGMHYEALGIQDRMERG----GV--SPDIVTYNSLIYGFCREGRM 283

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  LF ++      P+ VTYT++I G+C  ND  EA RL   M  +G+ P VVT++ I
Sbjct: 284 REALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSI 341

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           + +LC+ GK+  A+RLL  M  R V P+  T NTLI+ YC    +  A K+   M   G 
Sbjct: 342 LRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGL 401

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D  ++  LI+ +CK  +V+ A     EML  G  P+  TY+ L    ++    E  ++
Sbjct: 402 KPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIR 461

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
           L DE+ R  +  D   Y   I  LCK   +  A  +F  ++    + + V Y  L
Sbjct: 462 LPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSL 516



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 177/376 (47%), Gaps = 8/376 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  FN+L     K+   +    L   + S  +FPD++T++ LI+ +CK G       +
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGI 254

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R+ R   +P+ VT+ SLI G C E R+ EA  LF +  +    P+  TY TLI+G CR
Sbjct: 255 QDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCR 312

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL L E M            P  VTYN+I+  LC+EG +  A  L  +M +  +
Sbjct: 313 VNDLEEALRLREVMEVEG------LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VT  ++I  +C   D   A ++  +M++ G++PD  TF  ++   CK  ++D A  
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  M+  G +P+  TY+ L+D Y   D  +   +L   +   G   D+  Y  LI   C
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K   +E A  +++ M  KG+K   V Y +L    F+  +   A  + DEM +  +     
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLK 546

Query: 465 TYNNFIDGLCKSGFVL 480
            Y  F       G +L
Sbjct: 547 IYRCFSASYAGDGSIL 562



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 9/319 (2%)

Query: 189 AESRI-MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           A SR+  +A  +F   RV   +P +     L+N L +   T +   ++++M       GV
Sbjct: 138 ANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMV----RVGV 193

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
           V  PN   +N +I   CK G V+KA++L  +M+   I PD+ TY ++I  +C      EA
Sbjct: 194 V--PNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +   M   GV PD+VT++ ++   C+ G+M +A RL   +   G  PN  TY TLIDG
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDG 309

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
           YC  + ++ A +L   ME  G    VV+YN+++   C+   +++A  L +EM  + ++P 
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            VT NTL     +I  +  A+K+  +M    +  D +T+   I G CK   V  A E   
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLF 429

Query: 488 AIRDSKYELNIVSYNCLID 506
            + D+ +  +  +Y+ L+D
Sbjct: 430 EMLDAGFSPSYSTYSWLVD 448



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 138/258 (53%), Gaps = 2/258 (0%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           KP+      +++ L K    +   +++ KM    + P++  +  +I   C + D  +A++
Sbjct: 159 KPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQ 218

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           L  EM  + + PD+ T++ ++   CK G   +A  + + M   GV+P+  TYN+LI G+C
Sbjct: 219 LLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFC 278

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
              ++  A +LF   E NG   + V+Y TLI+ YC+  D+EEAL L   M  +G+ P VV
Sbjct: 279 REGRMREALRLF--REINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVV 336

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TYN++   L E  +++ A +L +EM    V  D  T N  I+  CK G +  A+++ + +
Sbjct: 337 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKM 396

Query: 490 RDSKYELNIVSYNCLIDG 507
            ++  + +  ++  LI G
Sbjct: 397 LEAGLKPDQFTFKALIHG 414



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 68/153 (44%)

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           + N+   + L+  Y  +     A ++F  M  +G    + +   L+N   K +       
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           +Y +M+  G+ P +  +N L     +   VE+A +L +EM    +  D +TYN  I   C
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K G   EAL +   +       +IV+YN LI G
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG 276


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 187/375 (49%), Gaps = 10/375 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G   D+Y ++ L++   +  R         R L +   P+  +FT +I+  C       A
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
                  R     PDV  YN ++ G C  G    AL  F       G+ G  CKPN  TY
Sbjct: 99  WRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKF-------GKMGKTCKPNVATY 151

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I+GLCK G +D A  LF ++  + ++PD  TY++++ G C A     A +++  M++
Sbjct: 152 NTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLE 211

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC-LTDKID 375
                D   ++ + D  CK  ++D+A  +L+ MI R   P+  TYN +I+G C   ++I+
Sbjct: 212 ANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIE 271

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A +LF  M  + C  + V+Y T+I    K  +V+  L L+  M   G+ P    Y++L 
Sbjct: 272 EAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLI 331

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS--GFVLEALELFRAIRDSK 493
               ++ +++ A  +  +  RNHV  D Y Y   I G C++    V EAL LF+ ++D +
Sbjct: 332 YAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRR 391

Query: 494 YELNIVSYNCLIDGL 508
              N+++YN ++ GL
Sbjct: 392 VWPNVITYNIVLRGL 406



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 34/399 (8%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EA+  F   L  H   P + SF I+  C    ++          + S G+ PD+  +++
Sbjct: 61  REAVRFFKRELCAH-CRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNV 119

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           ++  +C +GRV    +  G++ ++C  PN  T+ ++I GLC   +I  A  LFT+     
Sbjct: 120 VLKGYCDLGRVGRALIKFGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDL 178

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEM--ANGNGEFGVV----------------- 248
            +PD FTY+TL++GLC+      A+ +++ M  AN +G+ G                   
Sbjct: 179 VDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEAL 238

Query: 249 ----------CKPNTVTYNTIIDGLCK-EGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
                     CKP+ VTYN II+G+C+ +  +++A  LF +M   +  P+ VTY ++I G
Sbjct: 239 EVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILG 298

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
                +      LF  M   G+ PD   +  ++    K  K+D+A  +L+      V P+
Sbjct: 299 LSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPD 358

Query: 358 TYTYNTLIDGYCLTDK--IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            Y Y TLI GYC   K  +D A  LF +M+      +V++YN ++   CK    +EA  +
Sbjct: 359 VYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQI 418

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           + EM      P  +T+  + +G+    + ++  ++F +M
Sbjct: 419 FQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDM 457



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 159/324 (49%), Gaps = 13/324 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+++N +   L K    D  + LF RL    + PD +T+S L++  C+  R+     V
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L + +  +A  + ++  G C E R+ EA  +        C+P V TYN +ING+C+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQ 265

Query: 225 TGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             + I  A  LF++M   +      C PN VTY T+I GL K   V +  ELF  M    
Sbjct: 266 YKNRIEEAYRLFQQMVGSD------CPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG 319

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK--MDK 341
           ++PD   Y S+I  F      +EAK +  +     V PDV  ++ ++   C+  K  +D+
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN--TL 399
           A  L + M  R V PN  TYN ++ G C T + D A ++F  M    C  + +++   T+
Sbjct: 380 ALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTM 439

Query: 400 INWYCKNKDVEEALSLYSEMLSKG 423
              +C+  D  E   ++ +M+ KG
Sbjct: 440 GMIHCRKTDKFE--RIFMDMVYKG 461



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 1/229 (0%)

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
           K E    DV  YT ++     A    EA R F   +    +P + +F++I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
            +A R L  M   G+ P+   YN ++ GYC   ++  A   F  M    C  +V +YNT+
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTV 154

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           IN  CK   ++ A+ L++ +    + P   TY+TL  GL +  ++E A+K++D M   + 
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             D   YN   DG CK   V EALE+ + +   + + ++V+YNC+I+G+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGV 263



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 29/230 (12%)

Query: 66  LKKFLKERCKSSGQGDINLITPN--------------EALCIFDYMLRMHPSPPPVSSFN 111
           LK  ++ RCK S      ++T N              EA  +F  M+     P  V+   
Sbjct: 241 LKTMIQRRCKPS------VVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGT 294

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++ G L+K       L LFK ++ AGL PD Y +  LI  F K+ ++     +L    R+
Sbjct: 295 MILG-LSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARN 353

Query: 172 CFTPNAVTFTSLIKGLC--AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
              P+   +T+LI G C   + R+ EA  LF   +     P+V TYN ++ GLC+TG   
Sbjct: 354 HVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFD 413

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
            A  +F+EM      F V C PN +T+  +  G+      DK + +F+ M
Sbjct: 414 EAYQIFQEM------FKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDM 457



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 37/168 (22%)

Query: 377 ARKLF-VSMESNGCMHDVVSYNTLINWYCKNKDVEEAL-------------SLYS----- 417
           ARK F  S +  G  HDV  Y  L++   + +   EA+             SLYS     
Sbjct: 27  ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86

Query: 418 -----------------EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
                             M S GI P V  YN +  G  ++ +V RAL  F +M +    
Sbjct: 87  QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CK 145

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  TYN  I+GLCK G +  A+ LF  +     + +  +Y+ L+ GL
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGL 193


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 199/401 (49%), Gaps = 11/401 (2%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           ++L    A N  ++     FKR    G      +   L+    K  R +    +   ++R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIR 216

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR---TGH 227
               PN  TF  +I  LC   ++ +A  +    +V+   P+V +YNTLI+G C+    G 
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK 276

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  + +EM            PN  T+N +IDG  K+  +  + ++F +M D+++ P+
Sbjct: 277 MYKADAVLKEMVENE------VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V+TY S+I G C     NEA  +  +M+  GVQP+++T+  +++  CKNG M +A  + +
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            +  +G  P T  YN LID YC   KID    L   ME  G + DV +YN LI   C+N 
Sbjct: 391 SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
           ++E A  L+ ++ +KG+ P +VT++ L  G     +  +A  L  EM +  +     TYN
Sbjct: 451 NIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 468 NFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDG 507
             + G CK G +  A  +   + ++ +  +N+ SYN L+ G
Sbjct: 510 IMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 205/394 (52%), Gaps = 12/394 (3%)

Query: 112 ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRS 171
           ++   L +N+  D V  L+K +    + P+++T +++IN  CK G+++    V+  +   
Sbjct: 194 LMVALLKQNRSAD-VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252

Query: 172 CFTPNAVTFTSLIKGLC---AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            ++PN V++ +LI G C      ++ +A A+  +       P++ T+N LI+G  +  + 
Sbjct: 253 GYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNL 312

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             +L +F+EM + +        PN +TYN++I+GLC  G +++A  +  KM    + P++
Sbjct: 313 PGSLKVFKEMLDQD------VIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TY S+I GFC      EA  +F  +  QG +P    +++++D  CK GK+D    L E 
Sbjct: 367 ITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEE 426

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M   G+ P+  TYN LI G C    I+ A+KLF  + + G + D+V+++ L+  YC   +
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGE 485

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN-HVAADTYTYN 467
             +A  L  EM   G+KP  +TYN +  G  +   ++ A  +  +M +   +  +  +YN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             + G  + G + +A  L   + +     N ++Y
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 46/366 (12%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG-------- 156
           P V +FN++   L K    +    + + +   G  P++ +++ LI+ +CK+G        
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 157 ------------------------------RVSHGFVVLGRILRSCFTPNAVTFTSLIKG 186
                                          +     V   +L     PN +T+ SLI G
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 187 LCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
           LC   +I EA  +  K      +P++ TY++LING C+ G    AL++F+ +       G
Sbjct: 341 LCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK------G 394

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
              +P T  YN +ID  CK G +D    L  +M+ E I PDV TY  +I G C   +   
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           AK+LF ++ ++G+ PD+VTF ++M+  C  G+  KA+ LL+ M   G+ P   TYN ++ 
Sbjct: 455 AKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMK 513

Query: 367 GYCLTDKIDHARKLFVSMESNGCMH-DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           GYC    +  A  +   ME    +  +V SYN L+  Y +   +E+A  L +EML KG+ 
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573

Query: 426 PTVVTY 431
           P  +TY
Sbjct: 574 PNRITY 579



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 172/356 (48%), Gaps = 30/356 (8%)

Query: 74  CKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
           CK  G G +      +A  +   M+    SP  +++FNIL     K+ +    L +FK +
Sbjct: 269 CKLGGNGKMY-----KADAVLKEMVENEVSPN-LTTFNILIDGFWKDDNLPGSLKVFKEM 322

Query: 134 NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRI 193
               + P++ T++ LIN  C  G+++    +  +++ +   PN +T+ SLI G C    +
Sbjct: 323 LDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMM 382

Query: 194 MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
            EA  +F   +     P    YN LI+  C+ G       L EEM       G+V  P+ 
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE----GIV--PDV 436

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
            TYN +I GLC+ G ++ AK+LF ++ ++ + PD+VT+  ++ G+C   +  +A  L  E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGYCLTD 372
           M   G++P  +T++++M   CK G +  A+ +  ++   R +  N  +YN L+ GY    
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           K++ A  L   M   G + + ++Y            V+E      EM+ KG  P +
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEI----------VKE------EMVDKGFVPDI 595



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 10/263 (3%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           CKP  V        L K+      + L+ +M    I P+V T+  VI   C     N+A+
Sbjct: 191 CKPLMVA-------LLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCK---NGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
            +  +M   G  P+VV+++ ++D  CK   NGKM KA  +L+ M+   V+PN  T+N LI
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DG+   D +  + K+F  M     + +V++YN+LIN  C    + EA+ +  +M+S G++
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P ++TY++L  G  +   ++ AL +FD ++       T  YN  ID  CK G + +   L
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
              +       ++ +YNCLI GL
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGL 446



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 3/147 (2%)

Query: 363 TLIDGYCLTDKIDHARKLF--VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           + +DG+           +F  +SM  N C++ +++ + L+  Y  N   E     +    
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSG 180

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G K + ++   L + L + ++      L+ EM R  +  + +T+N  I+ LCK+G + 
Sbjct: 181 YYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
           +A ++   ++   Y  N+VSYN LIDG
Sbjct: 241 KARDVMEDMKVYGYSPNVVSYNTLIDG 267


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 192/365 (52%), Gaps = 10/365 (2%)

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+++ILI   C+   V    V+L  +++   + N  T+T LIKGLC E RI  A  +  +
Sbjct: 161 YSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEE 220

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
             +    P V+TYN +I+G C++G    AL + + +   NG     C P+  TYN +I G
Sbjct: 221 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMERNG-----CNPDDWTYNILIYG 274

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LC E   D+A+EL          P V+T+T++I G+C A   ++A R+   M+    + D
Sbjct: 275 LCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLD 333

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +  + V+++ L K  +  +A   +  M   G+ PN   Y ++IDGYC   K+  A ++F 
Sbjct: 334 LQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR 393

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ME  GC  +  +Y++LI    +++ + +A++L ++M   GI P V+TY TL  G  + H
Sbjct: 394 LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 453

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + + A +LF+ M +N +  D   YN     LCKSG   EA      +R     L  V+Y 
Sbjct: 454 EFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL--VRKGVV-LTKVTYT 510

Query: 503 CLIDG 507
            L+DG
Sbjct: 511 SLVDG 515



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 213/472 (45%), Gaps = 82/472 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K+      L +   +   G  PD +T++ILI   C         ++
Sbjct: 228 PSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELL 287

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE--------------- 209
              I+R  FTP  +TFT++I G C   RI +A  + T      C+               
Sbjct: 288 NDAIVRG-FTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIK 346

Query: 210 --------------------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                               P+V  Y ++I+G C+ G    AL +F  M +        C
Sbjct: 347 KCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG------C 400

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +PN  TY+++I GL ++  + KA  L  KM+++ I P V+TYT++I+G C  ++++ A R
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460

Query: 310 LFIEMMDQ-GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           LF EMM+Q G+ PD   ++V+   LCK+G+ ++A   L   + +GV     TY +L+DG+
Sbjct: 461 LF-EMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGF 516

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL--------------- 413
                 D A  L   M + GC  D  +Y+ L+   CK K + EAL               
Sbjct: 517 SKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576

Query: 414 --------------------SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
                               S+++EM+S G KP+  TY        +I Q+E A  L  E
Sbjct: 577 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 636

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           M R+ VA D  TYN FI+G    G++  A    + + D+  E N  +Y  L+
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILL 688



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 195/432 (45%), Gaps = 45/432 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           S+ IL   L + +     L L   +   G   +++T+++LI   CK GR+     VL  +
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                 P+  T+ ++I G C   R+ +A  +        C PD +TYN LI GLC     
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE--- 278

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD------------------ 270
               +  EE+ N     G    P  +T+  II+G CK   +D                  
Sbjct: 279 --KPDEAEELLNDAIVRGFT--PTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 271 -----------------KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
                            +AKE   +M    + P+VV YTS+I G+C       A  +F  
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           M  +G +P+  T+S ++  L ++ K+ KA  L+  M   G+ P   TY TLI G C   +
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
            D+A +LF  ME NG   D  +YN L +  CK+   EEA   YS ++ KG+  T VTY +
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVLTKVTYTS 511

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L  G  +    + A  L ++M      AD+YTY+  +  LCK   + EAL +   +  S 
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571

Query: 494 YELNIVSYNCLI 505
            + NIV+Y  +I
Sbjct: 572 VKCNIVAYTIII 583



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 194/460 (42%), Gaps = 69/460 (15%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K   +D    LF+ +   GL PD   +++L +  CK GR    +  
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF 496

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +R       VT+TSL+ G         AA L  K     C+ D +TY+ L+  LC+
Sbjct: 497 L---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCK 553

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++ ++M       GV C  N V Y  II  + KEG  D AK +F +M     
Sbjct: 554 QKKLNEALSILDQMTLS----GVKC--NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH 607

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA-- 342
            P   TYT  I  +C      EA+ L  EM   GV PDVVT++V ++     G MD+A  
Sbjct: 608 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFS 667

Query: 343 -------------------------------------------------SRLLELMIWRG 353
                                                             +LLE M+  G
Sbjct: 668 TLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHG 727

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           +NP   TY+++I G+C   +++ A  LF  M       +   Y  LI   C  K   +A+
Sbjct: 728 LNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAV 787

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI--- 470
           S  ++M+  G +P + +Y+ L +GL +    ++A  LF ++    +  + Y +N      
Sbjct: 788 SFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL----LGMEDYNHNEVAWKI 843

Query: 471 --DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             DGL K+G V    +L  A+ +   +++  +Y+ + D +
Sbjct: 844 LNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNI 883



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 7/315 (2%)

Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
           + +A  L     +  C  + ++Y  LI GLC T     AL L   M          C  N
Sbjct: 141 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDG------CSLN 194

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
             TY  +I GLCKEG +  A+ +  +M    + P V TY ++I G+C +    +A  +  
Sbjct: 195 LHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKA 254

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M   G  PD  T+++++  LC   K D+A  LL   I RG  P   T+  +I+GYC  +
Sbjct: 255 LMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
           +ID A ++  SM S+ C  D+ +Y  LIN   K    +EA    SEM + G+ P VV Y 
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           ++  G  ++ +V  AL++F  M       + +TY++ I GL +   + +A+ L   +++ 
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433

Query: 493 KYELNIVSYNCLIDG 507
                +++Y  LI G
Sbjct: 434 GITPGVITYTTLIQG 448



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 7/333 (2%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           N  ++T LI+GLC    + EA  L        C  ++ TY  LI GLC+ G    A  + 
Sbjct: 159 NEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVL 218

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
           EEM       GVV  P+  TYN +IDG CK G +  A  +   M+    NPD  TY  +I
Sbjct: 219 EEMP----LRGVV--PSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILI 272

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            G C     +EA+ L  + + +G  P V+TF+ I++  CK  ++D A R+   M+     
Sbjct: 273 YGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCK 331

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            +   Y  LI+      +   A++    M +NG   +VV Y ++I+ YCK   V  AL +
Sbjct: 332 LDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEV 391

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
           +  M  +G +P   TY++L  GL +  ++ +A+ L  +M+ + +     TY   I G CK
Sbjct: 392 FRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 451

Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
                 A  LF  +  +    +  +YN L   L
Sbjct: 452 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL 484



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 195/435 (44%), Gaps = 26/435 (5%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +F  M      P   +  ++++G L +++     ++L  ++   G+ P + T++ LI
Sbjct: 388 ALEVFRLMEHEGCRPNAWTYSSLIYG-LIQDQKLHKAMALITKMQEDGITPGVITYTTLI 446

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              CK     + F +   + ++  TP+   +  L   LC   R  EA +   +  V   +
Sbjct: 447 QGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTK 506

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
               TY +L++G  + G+T  A  L E+M N        CK ++ TY+ ++  LCK+  +
Sbjct: 507 ---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEG------CKADSYTYSVLLQALCKQKKL 557

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           ++A  +  +M    +  ++V YT +I         + AK +F EM+  G +P   T++V 
Sbjct: 558 NEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVF 617

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G++++A  L+  M   GV P+  TYN  I+G      +D A      M    C
Sbjct: 618 ISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASC 677

Query: 390 MHDVVSYNTLINWYCKNK----------------DVEEALSLYSEMLSKGIKPTVVTYNT 433
             +  +Y  L+  + K                  +++    L   M+  G+ PT VTY++
Sbjct: 678 EPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSS 737

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G  +  ++E A  LFD MR   ++ +   Y   I   C      +A+     + +  
Sbjct: 738 IIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG 797

Query: 494 YELNIVSYNCLIDGL 508
           ++ ++ SY+ LI GL
Sbjct: 798 FQPHLESYHYLIVGL 812



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
           C+ N  +Y  +I GLC+   V +A  L + M  +  + ++ TYT +I+G C     + A+
Sbjct: 156 CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGAR 215

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           R+  EM  +GV P V T++ ++D  CK+G+M  A  +  LM   G NP+ +TYN LI G 
Sbjct: 216 RVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGL 275

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C  +K D A +L       G    V+++  +IN YCK + +++AL + + MLS   K  +
Sbjct: 276 C-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
             Y  L   L +  + + A +   EM  N +A +   Y + IDG CK G V  ALE+FR 
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +       N  +Y+ LI GL
Sbjct: 395 MEHEGCRPNAWTYSSLIYGL 414


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 227/462 (49%), Gaps = 37/462 (8%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFK----RLNS 135
            D+ L+  ++AL ++  ++++H S P   + N L   L K++  +T   L+     R N 
Sbjct: 144 ADVGLV--DKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNG 201

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
             +  D YT SI++   C  GR+  G  ++  R  + C  PN V + +LI G C +  + 
Sbjct: 202 DDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGC-VPNIVFYNTLIDGYCKKGEVE 260

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTG---------------HTIVALNLFEEMA 239
            A  LF K ++    P + T+ +L+NG C+ G                  V + ++  + 
Sbjct: 261 SAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNII 320

Query: 240 NGNGEFGV--------------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           +   + G                C+P+ VTYNT+I+  C  G V++A++L  +     + 
Sbjct: 321 DARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLA 380

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P+ +TYT ++ G+C   ++ +A    IEM   G++ D++++  ++  L   G++D A  +
Sbjct: 381 PNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI 440

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
            + M+ RG+ P+   YN L++G     K+  A+ +   M       D   Y TL++ + +
Sbjct: 441 RDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIR 500

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
           + +++EA  L+  ++ KG+ P VV YN +  G  +   ++ A+   D+MRR H   D +T
Sbjct: 501 HGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFT 560

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++  IDG  K   +   L++F  +     + N+V+Y  LI+G
Sbjct: 561 FSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLING 602



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 179/333 (53%), Gaps = 6/333 (1%)

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+ T++ LIN FC  G V     +L + +R    PN +T+T L+ G C +    +A   
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
             +      E D+ +Y  LI+GL   G    AL + + M N     G++  P+   YN +
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR----GIL--PDANIYNVL 459

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           ++GL K+G +  AK +  +M D+NI PD   Y +++ GF    + +EAK+LF  ++++G+
Sbjct: 460 MNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGL 519

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
            P VV ++V++    K+G MD A   ++ M      P+ +T++T+IDGY     ++   K
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLK 579

Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
           +F  M    C  +VV+Y +LIN YC+  + + A  L+S M S G+KP+VVTY+ L     
Sbjct: 580 IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639

Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           +  ++ +A+  F+ M  N    +   ++  ++G
Sbjct: 640 KEAKLGKAVSYFELMLINKCTPNDAAFHYLVNG 672



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 193/401 (48%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L     K    ++   LFK+L   G  P + T   L+N FCKMG      ++
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +     + N   + ++I         ++A     +     CEPD+ TYNTLIN  C 
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L E+             PN +TY  ++ G CK+G   KA +  ++M    +
Sbjct: 361 RGEVEEAEKLLEQTIRRG------LAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             D+++Y ++I G   A + + A  +   MM++G+ PD   ++V+M+ L K GK+  A  
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M+ + + P+ + Y TL+DG+     +D A+KLF  +   G    VV YN +I  + 
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  ++ A+    +M      P + T++T+  G  + H +   LK+F  M + +   +  
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY + I+G C+ G    A +LF  +R    + ++V+Y+ LI
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI 635



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 22/360 (6%)

Query: 95  DYMLRMHPSPPPVS--SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           DY++ M  S   V   S+  L   L      DT L++  R+ + G+ PD   +++L+N  
Sbjct: 404 DYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGL 463

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G++S   V+L  +L     P+A  + +L+ G      + EA  LF        +P V
Sbjct: 464 FKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGV 523

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             YN +I G  ++G    A+   ++M   +        P+  T++TIIDG  K+  ++  
Sbjct: 524 VGYNVMIKGFSKSGMMDNAILCIDKMRRAHH------VPDIFTFSTIIDGYVKQHNMNAV 577

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++F  M  +N  P+VVTYTS+I G+C   +   A++LF  M   G++P VVT+S+++  
Sbjct: 578 LKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGS 637

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK------------- 379
            CK  K+ KA    ELM+     PN   ++ L++G+  T     +R+             
Sbjct: 638 FCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFE 697

Query: 380 -LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
             F  M  +G      +YN ++   C+ + V+ AL L ++ML+ G+    V++  L  G+
Sbjct: 698 DFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGI 757



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 4/262 (1%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT--YTS--VIRGFCYANDWNE 306
           P+T   N++++ L K   ++ A +L+ +M D +   D+    YT+  +++G C      +
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
             +L      +G  P++V ++ ++D  CK G+++ A +L + +  +G  P   T+ +L++
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
           G+C     +    L + M+  G   +V  YN +I+   K     +A     EM     +P
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
            +VTYNTL        +VE A KL ++  R  +A +  TY   + G CK G   +A +  
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +  S  E++++SY  LI GL
Sbjct: 407 IEMSTSGLEVDMISYGALIHGL 428



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 10/278 (3%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N  LCI D M R H   P + +F+ +     K  + + VL +F  +      P++ T++ 
Sbjct: 541 NAILCI-DKMRRAH-HVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTS 598

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN +C+ G       +   +      P+ VT++ LI   C E+++ +A + F    +  
Sbjct: 599 LINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK 658

Query: 208 CEPDVFTYNTLINGLCRTGHTIVAL---NLFEEMANGNGEF-----GVVCKPNTVTYNTI 259
           C P+   ++ L+NG   T  T V+    NL E   +   +F     G         YN I
Sbjct: 659 CTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCI 718

Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
           +  LC++  V  A +L  KM    +  D V++ ++I G C   +  E + +    +++G 
Sbjct: 719 LICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGE 778

Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
               + +S+ +D+    G + +AS +L+ MI   V+PN
Sbjct: 779 LQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 239/504 (47%), Gaps = 45/504 (8%)

Query: 24  FSSSFPHTRKP--------------TSSISENEPSYP-----TTTSKLKESLRLTVKDRA 64
           FSSS+ H  +P              +S++ +++  +      T+  + K+S R+   D  
Sbjct: 3   FSSSYSHVSRPPLFYTKPKFFCNFRSSTVIQDKEDFQFISILTSILRGKQSWRIAFND-- 60

Query: 65  SLKKFLKERCKSSGQGDI-NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
               F+    K S    +  +++ N++  + D  L      P V + + L   L + + +
Sbjct: 61  ---PFISRNLKPSHVDKVLMMLSLNDSRLMKDCNLM-----PEVRTLSALLNGLLRFRRF 112

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           + VL LF  + SA + PDIY +S ++   C++   +    ++  +  +    + V +  L
Sbjct: 113 NDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVL 172

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           I GLC   RI EA  +         E +V TY    N          A  LF+EM    G
Sbjct: 173 IHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNE---------AELLFKEM----G 219

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           E G+    N +TY+ +ID  C+ G +D A     KM   +I   V  Y S+I G+C   +
Sbjct: 220 EKGLC--ANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGN 277

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
            + AK  F EM+D+G+ P VVT++ ++   C  G+  KA ++   M  +G++PNTYT+  
Sbjct: 278 ASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTA 337

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           +I G C  + +  A +LF  M+    M   V+YN +I  +C++ ++ EA  L  EM+ KG
Sbjct: 338 IISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKG 397

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
             P   TY  L  GL  + +V  A +  D++ ++H   +   Y+  + G CK G   +A+
Sbjct: 398 FVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAV 457

Query: 484 ELFRAIRDSKYELNIVSYNCLIDG 507
              R + +    +++V Y  LIDG
Sbjct: 458 SACRVMVERGVAMDLVCYAILIDG 481



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 185/376 (49%), Gaps = 13/376 (3%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ +F  M      P  V+ +N++     ++ +      L   +   G  PD YT+  L
Sbjct: 350 EAIRLFGEMKERKIMPSEVT-YNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I+  C +GRVS     +  + +     N + +++L+ G C E R  +A +          
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
             D+  Y  LI+G  R   T     L +EM N         +P+ V Y  +ID   K G 
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG------LRPDAVIYTNMIDRHSKAGN 522

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           + +A  L+  M DE   P+VVTYT++I G C A   ++A+ L  E +   V P+ +T+  
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
            +D L + G M+KA +L   M+ +G    T +YN LI G+C   KI+ A KL   M  N 
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND 641

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D ++Y+T+I   CK  +++EA+ L+  ML KG+KP  + Y+ L  G     ++E+A 
Sbjct: 642 ILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAF 701

Query: 449 KLFDE-----MRRNHV 459
           +L DE     MR NHV
Sbjct: 702 ELRDEMIRRGMRSNHV 717



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 185/376 (49%), Gaps = 7/376 (1%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  +   GL P + T++ LI+ +C  G     F V   +     +PN  TFT++I GLC 
Sbjct: 285 FDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCR 344

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
            + + EA  LF + +     P   TYN +I G CR+G+   A +L +EM  G G      
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV-GKGFV---- 399

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            P+T TY  +I GLC  G V +AKE    +  ++   + + Y++++ G+C    + +A  
Sbjct: 400 -PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVS 458

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
               M+++GV  D+V +++++D   +         LL+ M   G+ P+   Y  +ID + 
Sbjct: 459 ACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHS 518

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               +  A  L+  M   GC+ +VV+Y  LIN  CK   +++A  L  E L   + P  +
Sbjct: 519 KAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHI 578

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY      L     +E+A++L   M +  +A  T +YN  I G C+ G + EA +L   +
Sbjct: 579 TYGCFLDHLTRGGNMEKAVQLHHAMLKGFLAT-TVSYNILIRGFCRLGKIEEATKLLHGM 637

Query: 490 RDSKYELNIVSYNCLI 505
            D+    + ++Y+ +I
Sbjct: 638 TDNDILPDYITYSTII 653



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 176/381 (46%), Gaps = 7/381 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   +F  +   L +       + LF  +    + P   T++++I   C+ G +S  F +
Sbjct: 330 PNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHL 389

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  ++   F P+  T+  LI GLC+  R+ EA            + +   Y+ L++G C+
Sbjct: 390 LDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCK 449

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A++    M        +VC      Y  +IDG  +E        L  +M +  +
Sbjct: 450 EGRFKDAVSACRVMVERGVAMDLVC------YAILIDGTAREHDTRALFGLLKEMHNHGL 503

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD V YT++I     A +  EA  L+  M+D+G  P+VVT++ +++ LCK G MDKA  
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAEL 563

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L +  +   V PN  TY   +D       ++ A +L  +M   G +   VSYN LI  +C
Sbjct: 564 LSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFC 622

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   +EEA  L   M    I P  +TY+T+     +   ++ A+KL+  M    +  DT 
Sbjct: 623 RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTL 682

Query: 465 TYNNFIDGLCKSGFVLEALEL 485
            Y+  + G C +G + +A EL
Sbjct: 683 AYSFLVHGCCIAGELEKAFEL 703



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 133/252 (52%), Gaps = 9/252 (3%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           + IL    A+      +  L K +++ GL PD   ++ +I+   K G +   F +   ++
Sbjct: 475 YAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMV 534

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHT 228
                PN VT+T+LI GLC ++ +M+ A L +K  + +   P+  TY   ++ L R G+ 
Sbjct: 535 DEGCLPNVVTYTALINGLC-KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNM 593

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A+ L   M  G           TV+YN +I G C+ G +++A +L   M D +I PD 
Sbjct: 594 EKAVQLHHAMLKG-------FLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           +TY+++I   C  ++  EA +L+  M+D+G++PD + +S ++   C  G+++KA  L + 
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 349 MIWRGVNPNTYT 360
           MI RG+  N  T
Sbjct: 707 MIRRGMRSNHVT 718



 Score = 45.1 bits (105), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 413 LSLYSEMLSK--GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
           LSL    L K   + P V T + L  GL    +    L LFD++   +V  D Y Y+  +
Sbjct: 79  LSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVV 138

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             LC+     +A E+   +  ++ +L+IV YN LI GL
Sbjct: 139 RSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGL 176


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 216/460 (46%), Gaps = 21/460 (4%)

Query: 64  ASLKKFLKERCKSSGQGDINLITPNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNK 121
           +++K+ L+     S    + L +  +A+ +FD +   R    P P ++F  L    +   
Sbjct: 99  SAIKRRLRSPLLYSRAVSVLLASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAG 158

Query: 122 HYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFT 181
            +   +  F R+      P  + ++ +       G +     +  R++ S   PN+ T+ 
Sbjct: 159 RHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYI 218

Query: 182 SLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
            L+ GLC     ++A  +F +       PDV  Y  L++ LC  G    A  L   M   
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKE- 277

Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
           NG     C P+ VTY   + GLCK G VD+A   F  ++D      ++ Y+ +I G   A
Sbjct: 278 NG-----CPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQA 332

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             ++E    + EM+ + + PD+  +++++    + G+   A  LL+ M  +G  P+T+ Y
Sbjct: 333 GRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCY 392

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           NTL+        ID A+ L   M  N  + D  ++N +I   CK   +++A+ ++ EM  
Sbjct: 393 NTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGE 452

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA-------------DTYTYNN 468
            G  PTV+TYN L  GL+    +E A  LF +M   +  +             DT +   
Sbjct: 453 HGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRK 512

Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +DG+C+SG VL+A +L R I +S    ++V+YN LI+GL
Sbjct: 513 LVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGL 552



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 203/452 (44%), Gaps = 54/452 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +N +F  L         L+L+ R+ S+G  P+  T+ +L++  CK G       +
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKM 236

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+   +T L+  LC E RI +A  L    +   C PD  TY   ++GLC+
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A + FE + +G    G++       Y+ +IDGL + G  D+    + +M  ++I
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLI------GYSCLIDGLFQAGRFDEGLSYYTEMLGKSI 350

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS----------------- 327
           +PD+  YT +IR F  A    +A  L  EM D+G  PD   ++                 
Sbjct: 351 SPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQS 410

Query: 328 ---------VIMDE---------LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                    V++D          LCK G +DKA ++ + M   G +P   TYN LIDG  
Sbjct: 411 LMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLY 470

Query: 370 LTDKIDHARKLFVSME-------------SNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
               ++ AR LF  ME                 + D  S   L++  C++  V +A  L 
Sbjct: 471 RAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLL 530

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
             ++  G+ P VVTYNTL  GL +   ++ AL+LF E++   ++ D  TY   IDGL ++
Sbjct: 531 RGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRA 590

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               +A  LF+ I  S    ++  YN ++  L
Sbjct: 591 HRENDATMLFQNILRSGGFPSLPIYNTMMRSL 622



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 171/417 (41%), Gaps = 87/417 (20%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +E L  +  ML    SP  ++ + IL    A+         L   +   G  PD + ++ 
Sbjct: 336 DEGLSYYTEMLGKSISPD-ITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+     +G +     ++  +L++    ++ T   +I GLC +  I +A  +F +     
Sbjct: 395 LLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHG 454

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------------------------ 243
           C P V TYN LI+GL R G    A  LF +M  GN                         
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLV 514

Query: 244 --------------------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                               E GVV  P+ VTYNT+I+GLCK   +D A  LF +++ + 
Sbjct: 515 DGMCQSGQVLKAYKLLRGIIESGVV--PDVVTYNTLINGLCKAKNLDGALRLFKELQLKG 572

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+PD +TY ++I G   A+  N+A  LF  ++  G  P +  ++ +M  LC+  K+ +A 
Sbjct: 573 ISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAI 632

Query: 344 RLL----------------------------------ELM----IWRGVNPNTYTYNTLI 365
            L                                   EL+    ++  +NPN YT    +
Sbjct: 633 NLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYT--IWV 690

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            G C   KID A ++F  +E  G +        LIN+ C ++++  A+ +    LSK
Sbjct: 691 IGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSK 747


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 205/454 (45%), Gaps = 47/454 (10%)

Query: 96  YMLRM-HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
           Y+ RM     P V S+NI+     K ++ +  L+  + +   G  P  + +S ++  FCK
Sbjct: 32  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 91

Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
            G VS    V   +      P+ V F  L+ GL    +I EA  LF       C+PDV T
Sbjct: 92  TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 151

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YNT+I GLC+      A+ L E M   +        P  VTY T+ID LCK   + +A E
Sbjct: 152 YNTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFVTYTTLIDHLCKFTRLQQAYE 205

Query: 275 LFLKMKD-----------------------------------ENINPDVVTYTSVIRGFC 299
           +F KM +                                   +N+     TY+ V+ G  
Sbjct: 206 VFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLS 265

Query: 300 YANDWN-EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
             +  N EA +L  EMM + + PD   +S++++ LCK  +  +A  + + M  RG++P  
Sbjct: 266 KMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTV 325

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
            TYNTL++G   T K+  A +L   M   G + D  SYN +I  +C N D  EA  L+ +
Sbjct: 326 VTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQD 385

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH----VAADTYTYNNFIDGLC 474
           M+  GI     TYN + +G  +      A  LF  M+        A + +TY   I  LC
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           K+  V EA +L  A+RD  +  ++  +  L+  L
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 479



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 193/403 (47%), Gaps = 31/403 (7%)

Query: 135 SAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
            AGLFP+   ++ LI+C CK G ++     L R+ + C  PN V++  +I G C    I 
Sbjct: 3   EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYCKARNIE 61

Query: 195 EAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 248
           +A A   +       P    Y++++   C+TG+   A+++F EM     E  +V      
Sbjct: 62  KALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 121

Query: 249 -----------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
                                  CKP+ VTYNT+I GLCK   +D+A  L  +MK E+++
Sbjct: 122 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 181

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P  VTYT++I   C      +A  +F +M +         +SV+ ++L + GK+ +ASR+
Sbjct: 182 PTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRV 241

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKID-HARKLFVSMESNGCMHDVVSYNTLINWYC 404
              M  + V     TY+ ++ G    D  +  A KL   M       D  +Y+ LIN  C
Sbjct: 242 YSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLC 301

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K +   EA  ++ EM  +GI PTVVTYNTL  GL    +++ A++L   M       DT 
Sbjct: 302 KARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTC 361

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +YN  I G C +G   EA  LF+ +      LN  +YN +I G
Sbjct: 362 SYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVG 404



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 206/438 (47%), Gaps = 34/438 (7%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN+L   L + +       LF+ +NS G  PD+ T++ +I   CK  ++     +
Sbjct: 112 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 171

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+ +   +P  VT+T+LI  LC  +R+ +A  +F K     C      Y+ L N L R
Sbjct: 172 LERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQR 231

Query: 225 TGHTIVALNLFEEMA----------------------NGNGE--------FGVVCKPNTV 254
            G  + A  ++ +M                        GN E         G    P+  
Sbjct: 232 AGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFY 291

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
            Y+ +I+GLCK     +AKE+F +M+   I+P VVTY +++ G        +A  L   M
Sbjct: 292 AYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 351

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +DQG  PD  ++++++   C NG  ++A  L + MI  G+  NT+TYN +I G+   +  
Sbjct: 352 LDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAW 411

Query: 375 DHARKLFVSMESNG----CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             A  LF  M+S         ++ +Y  LI+  CK   VEEA  L S M  KG  P++  
Sbjct: 412 SSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKI 471

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           +  L   L    +++ A +L+ EM R +      + N  +DG+ + G V EA +  + + 
Sbjct: 472 WEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMT 531

Query: 491 DSKYELNIVSYNCLIDGL 508
           D+    +  +Y+ L+ GL
Sbjct: 532 DTGIVPDKFTYDKLVVGL 549



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 179/343 (52%), Gaps = 10/343 (2%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +L +   PNA+ + +LI  LC    + EA + + K     C P+V +YN +I+G C+  +
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARN 59

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              AL    EM     E G    P    Y++I+   CK G V KA ++F +M  +   PD
Sbjct: 60  IEKALAFLREME----ELGH--PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD 113

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           +V +  ++ G   A   +EA+ LF  M  +G +PDVVT++ ++  LCK  K+D+A  LLE
Sbjct: 114 IVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE 173

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M    V+P   TY TLID  C   ++  A ++F  M    C     +Y+ L N   +  
Sbjct: 174 RMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH--QVERALKLFDEMRRNHVAADTYT 465
            + EA  +YS+M  K +  T  TY+ + LGL ++    VE A KL  EM    +A D Y 
Sbjct: 234 KLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVE-AAKLVTEMMGKKIAPDFYA 292

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           Y+  I+GLCK+    EA E+F+ +R       +V+YN L++GL
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGL 335



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 195/476 (40%), Gaps = 81/476 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L K K  D  + L +R+    + P   T++ LI+  CK  R+   + V
Sbjct: 147 PDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEV 206

Query: 165 LGRILR---SCFTPN-AVTFTSLIKG--LCAESRI------------------------- 193
             ++     +C  P  +V F  L +   L   SR+                         
Sbjct: 207 FEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSK 266

Query: 194 -----MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
                +EAA L T+       PD + Y+ LINGLC+      A  +F+EM  G G     
Sbjct: 267 MDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEM-RGRG----- 320

Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
             P  VTYNT+++GL     +  A EL   M D+   PD  +Y  +IRGFC   D NEA 
Sbjct: 321 ISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAY 380

Query: 309 RLFIEMMDQGV---------------------------------------QPDVVTFSVI 329
            LF +M+  G+                                        P++ T+ ++
Sbjct: 381 CLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEIL 440

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +  LCK  ++++A +LL  M  +G  P+   +  L+       ++D A +L+  M    C
Sbjct: 441 ISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINC 500

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
              V S N L++   +   V+EA     +M   GI P   TY+ L +GL    + ++A K
Sbjct: 501 QQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARK 560

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           L +E+ R+    +       +  LC  G    A E +  +     E+ +  +N L+
Sbjct: 561 LVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 163/380 (42%), Gaps = 23/380 (6%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P EA  +F  M     SP  V+   +L G L+  K  D +   +  L+  G  PD  +++
Sbjct: 306 PGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQ-GRLPDTCSYN 364

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           ++I  FC  G  +  + +   +++     N  T+  +I G   +     A  LF + +  
Sbjct: 365 LMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSG 424

Query: 207 ACE----PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
             +    P++FTY  LI+ LC+T     A  L   M +     G V  P+   +  ++  
Sbjct: 425 KNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDK----GFV--PSLKIWEVLLSR 478

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           L + G +D A EL+ +M   N    V +   ++ G       +EAK    +M D G+ PD
Sbjct: 479 LARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPD 538

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
             T+  ++  LC  GK D+A +L+E ++  G  P       L+   C       A + + 
Sbjct: 539 KFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYC 598

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK--GIKPTVVTYNTLFLG-LF 439
            + S G    +  +NTL+   C  + ++     Y +M+ +  G+   +V     F   LF
Sbjct: 599 WLPSVGVEVTLGMHNTLVTSCCLARKLD-----YLDMIEQREGVPDVIVERIEKFRAELF 653

Query: 440 EIHQVERALKLFDEMRRNHV 459
                E  +K+++E R   +
Sbjct: 654 R----EEEVKIYEETRDRKI 669


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 206/401 (51%), Gaps = 22/401 (5%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  ++ L   L + K Y+ V  L++++    + PD+Y ++I++    + G+V     +L 
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +  S   P+ V +  LIKG C    + EA +L  +     C P+V TY+ LI+G+CR G
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNG 420

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            T  A  +F EM        + C P+ VT+N++IDGLCK G ++KA  LF KM+    NP
Sbjct: 421 LTRDAQEIFNEMEK------LGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGR-NP 473

Query: 287 --------------DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
                         D  +   ++   C +   ++A R+ +++ D G  P + T++++++ 
Sbjct: 474 SLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G  + A +L   M ++G++P+T TY TLI+G     + + A K+F  ME NGC  D
Sbjct: 534 FCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPD 593

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
              Y T++ W C+  ++  A SL+ + L + I+           G FE  +VE+A++   
Sbjct: 594 AAVYRTMMTWMCRRMELPRAFSLWLKYL-RNIRSQEDEAIKAIEGYFEKQEVEKAVRGLL 652

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           EM       D   Y  ++ GLC++  V EAL++F  + + K
Sbjct: 653 EMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYK 693



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 206/414 (49%), Gaps = 21/414 (5%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            +F +L     K    D  +  F  +      PD+YT++++++   +   +     V  R
Sbjct: 127 DAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTR 186

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           +++    PN  TF+ LI GLC    + +A  LF +       PD FTY  +I+GLCR+  
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
              A  LF++M +     GV   P+ VT N +++G C    VD+A  L    + +    D
Sbjct: 247 VDDAYRLFDKMKDS----GV--GPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
           V  Y+ +IRG   A  + + + L+ +M++  V+PDV  ++++M  L + GK+  A  LL 
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            M   GV P+T  YN LI G+C    +  AR L + +  + C  +V +Y+ LI+  C+N 
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNG 420

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR--RN-------- 457
              +A  +++EM   G  P+ VT+N+L  GL +  Q+E+A  LF +M   RN        
Sbjct: 421 LTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLS 480

Query: 458 ----HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               HV  D+ +    ++ LC SG + +A  +   + DS     I +YN L++G
Sbjct: 481 QGPSHV-LDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 197/472 (41%), Gaps = 81/472 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N++   L +       L+++ R+      P++ T SILI+  CK G V     +
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC- 223
              + +    P+A T+  +I GLC   R+ +A  LF K +     PD  T N L+NG C 
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 224 --RTGHTIVALNLFEEMANGNGEFGVVC--------------------------KPNTVT 255
             R       L LFE+        G  C                          KP+   
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y  ++ GL + G V  A EL  +M +  + PD V Y  +I+GFC     +EA+ L +E+ 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
                P+V T+S+++  +C+NG    A  +   M   G  P+  T+N+LIDG C T +++
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458

Query: 376 HARKLFVSME--------------------------------SNGCMHD----------- 392
            A  LF  ME                                 +G +H            
Sbjct: 459 KAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADS 518

Query: 393 -----VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                + +YN L+N +CK  +   A  L+ EM  KG+ P  VTY TL  GL    + E A
Sbjct: 519 GDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDA 578

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF----RAIRDSKYE 495
            K+FD+M +N    D   Y   +  +C+   +  A  L+    R IR  + E
Sbjct: 579 YKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDE 630



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 160/330 (48%), Gaps = 6/330 (1%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
            F  LIK         +A   F   R F C PDV+TYN +++ L +    ++AL ++  M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
              N      C PN  T++ +IDGLCK G V  A  LF +M    I PD  TY  VI G 
Sbjct: 188 MKLN------CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGL 241

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C +   ++A RLF +M D GV PD VT + +++  C   ++D+A  LL L    G   + 
Sbjct: 242 CRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDV 301

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             Y+ LI G     + +  + L+  M  +    DV  Y  ++    +   V +AL L +E
Sbjct: 302 RGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNE 361

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M   G+ P  V YN L  G  ++  +  A  L  E+ R+    +  TY+  I G+C++G 
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGL 421

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +A E+F  +       + V++N LIDGL
Sbjct: 422 TRDAQEIFNEMEKLGCYPSAVTFNSLIDGL 451



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 96/191 (50%)

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G++     F V++    K G  DKA      M      P+ YTYN ++D     + +  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
             ++  M    C+ +V +++ LI+  CK+ +V++AL L+ EM  +GI P   TY  +  G
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L    +V+ A +LFD+M+ + V  D  T N  ++G C    V EA  L R      Y L+
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 498 IVSYNCLIDGL 508
           +  Y+CLI GL
Sbjct: 301 VRGYSCLIRGL 311



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%)

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
            +I D L     ++   + LE +   G+  +   +  LI  Y      D A + F SM  
Sbjct: 95  DLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRD 154

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
             C  DV +YN +++   +   +  AL++Y+ M+     P V T++ L  GL +   V+ 
Sbjct: 155 FDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKD 214

Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           AL LFDEM +  +  D +TY   I GLC+S  V +A  LF  ++DS    + V+ N L++
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLN 274

Query: 507 G 507
           G
Sbjct: 275 G 275


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 227/475 (47%), Gaps = 66/475 (13%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M +    P   S  ++L   + + + Y  VL ++ ++    + PD++T +I++
Sbjct: 15  ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVL-VYDQMRRLDIVPDVFTCAIMV 73

Query: 150 NCFCKMGRVSH-------------------------GFVVLGRI----------LRSCFT 174
           N +CK G+V                           G+V LG I                
Sbjct: 74  NAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVM 133

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            N VT T LIKG C + ++ EA  +  +  +      D + Y  LI+G C+ G    A+ 
Sbjct: 134 RNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIR 193

Query: 234 LFEEM--------------------ANGN---GEFGVVC------KPNTVTYNTIIDGLC 264
           + +EM                     NG    GE  ++C      KP++ +Y T++DG C
Sbjct: 194 VRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYC 253

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           ++G   KA  +  +M  + I P VVTY ++++G C   D+ +A RL+  M+ +GV P+ V
Sbjct: 254 RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEV 313

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
            +  ++D L K G   +A  L + ++ RG+N + Y +NT+I+G C   ++D A++ F  M
Sbjct: 314 GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           E  GC  D ++Y TL + YCK  +VEEA  +  +M  + I P++  YN+L +GLF   ++
Sbjct: 374 EELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKI 433

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
            + + L  EM    ++ +  TY   I G C  G + +A   +  +    +  N++
Sbjct: 434 SKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVI 488



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 176/350 (50%), Gaps = 6/350 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L  +K    ++ L   +++ GL P++ T+  LI  +C  GR+   F  
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++   F PN +  + ++  L    RI EA  L  K   F    D        N   R
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIR 534

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                   +  +E A    +F +   PN V YN  + GLCK G V+ A+  FL +   + 
Sbjct: 535 KLDCWKIADTLDESAI---KFSL---PNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSF 588

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD  TY ++I GF  A   NEA  L  EM+++G+ P++ T++ +++ LCK+G +D+A R
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARR 648

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + +  +G+ PN  TYN LIDGYC +     A  L   M   G    +++Y++LIN +C
Sbjct: 649 LFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFC 708

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           K  DVEEA+ L +EM +  +  T+ T++ L  G  +   V++  KL + M
Sbjct: 709 KQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 198/427 (46%), Gaps = 42/427 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           + AL ++D +L        + +FN +   L K    D     FKR+   G  PD  T+  
Sbjct: 329 SRALTLWDDIL-ARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRT 387

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L + +CK+G V   F +  ++ +    P+   + SLI GL    +I +   L  +     
Sbjct: 388 LSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRG 447

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P+V TY  LI G C  G    A + + EM       G    PN +  + I+  L + G
Sbjct: 448 LSPNVVTYGALIAGWCDQGRLDKAFSAYFEM------IGKGFAPNVIICSKIVSSLYRLG 501

Query: 268 FVDKAKELFLKMKD-------------ENIN----------------------PDVVTYT 292
            +D+A  L  KM D             +N +                      P+ V Y 
Sbjct: 502 RIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYN 561

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
             + G C +   N+A+R F+ +      PD  T+  ++      G +++A  L + M+ +
Sbjct: 562 IAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNK 621

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G+ PN  TYN L++G C +  +D AR+LF  +   G + +VV+YN LI+ YCK+    EA
Sbjct: 622 GLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREA 681

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
           L L  +ML +GI P+++TY++L  G  +   VE A+KL +EM+ ++V     T++  ++G
Sbjct: 682 LDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEG 741

Query: 473 LCKSGFV 479
             + G V
Sbjct: 742 CIQHGDV 748



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 7/363 (1%)

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
           +++  + + G V +   V   + +    P+  +  SL+  L        A  ++ + R  
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
              PDVFT   ++N  C+ G    A+    EM     E       N V+YN+++DG    
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFEL------NAVSYNSLVDGYVSL 114

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM-MDQGVQPDVVT 325
           G ++ AK +   M ++ +  + VT T +I+G+C      EA+++  EM  + GV  D   
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           +  ++D  CK GKM  A R+ + M+  G+  N +  N+LI+GYC   ++    +L + M 
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
                 D  SY TL++ YC++    +A ++  +ML KGI+PTVVTYNTL  GL      +
Sbjct: 235 KLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYK 294

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL+L+  M +  V  +   Y   +DGL K G    AL L+  I       +I ++N +I
Sbjct: 295 DALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMI 354

Query: 506 DGL 508
           +GL
Sbjct: 355 NGL 357



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 182/370 (49%), Gaps = 9/370 (2%)

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G+  D Y +  LI+ +CK+G++     V   +L+     N     SLI G C   ++ E 
Sbjct: 167 GVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEG 226

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
             L    R    +PD ++Y TL++G CR G +  A N+ ++M     E      P  VTY
Sbjct: 227 ERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIE------PTVVTY 280

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT++ GLC+ G    A  L+  M    + P+ V Y +++ G     D++ A  L+ +++ 
Sbjct: 281 NTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILA 340

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           +G+   +  F+ +++ LCK G+MD A    + M   G  P+  TY TL DGYC    ++ 
Sbjct: 341 RGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEE 400

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A K+   ME       +  YN+LI     +K + + + L +EM ++G+ P VVTY  L  
Sbjct: 401 AFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIA 460

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  +  ++++A   + EM     A +    +  +  L + G + EA  L + + D  ++L
Sbjct: 461 GWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD--FDL 518

Query: 497 NIVSYNCLID 506
            ++ + CL D
Sbjct: 519 -VLDHRCLED 527



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 43/407 (10%)

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
           L PD Y++  L++ +C+ G  S  F V  ++LR    P  VT+ +L+KGLC      +A 
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDAL 297

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTY 256
            L+         P+   Y TL++GL + G    AL L+++ +A G          +   +
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARG-------INKSIYAF 350

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           NT+I+GLCK G +D AKE F +M++    PD +TY ++  G+C   +  EA ++  +M  
Sbjct: 351 NTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEK 410

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
           + + P +  ++ ++  L  + K+ K   LL  M  RG++PN  TY  LI G+C   ++D 
Sbjct: 411 EEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDK 470

Query: 377 ARKLFVSM--------------------------ESNGCMHDVVSYNTLINWYC----KN 406
           A   +  M                          E+N  +  +V ++ +++  C    +N
Sbjct: 471 AFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQN 530

Query: 407 KDVE--EALSLYSEMLSKGIK---PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            D+   +   +   +    IK   P  V YN    GL +  +V  A + F  +       
Sbjct: 531 ADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTP 590

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           D +TY   I G   +G+V EA  L   + +     NI +YN L++GL
Sbjct: 591 DNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGL 637


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 208/446 (46%), Gaps = 37/446 (8%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D M R     P V ++N+L   L +N   D    +   ++  G  PD  +H  +++  
Sbjct: 144 VYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGM 202

Query: 153 CKMGRVSHG------------------------------FVVLGRILRSCFTPNAVTFTS 182
           CK+GRV                                 F V+  +++    PN VT+T+
Sbjct: 203 CKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 262

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           ++   C    +  A A+  +     C P+V T+  L+ G    G    AL+++  M +  
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                   P+T++YN +I GLC  G +  A + F  MK   + P+  TY++++ GF  A 
Sbjct: 323 W------APSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG 376

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           D + A  ++ EM   G +P+VV ++ ++D LCK    D+A  L++ M+     PNT T+N
Sbjct: 377 DLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFN 436

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           TLI   C   ++  A  +F  M  NGC  +  +YN L++   +  + ++A ++  EML+ 
Sbjct: 437 TLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN 496

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G + ++VTYNT+   L ++   + A+ L   M    +  D +T+N  I   CK G V  A
Sbjct: 497 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 556

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             L   +       N+V+Y  LI  L
Sbjct: 557 ACLLGQMNAVNCPRNVVAYTILISEL 582



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 208/406 (51%), Gaps = 15/406 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   L +      V+ ++  +  AG+ P++YT+++LI   C+  RV     +
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGL 222
           L  + R    P+ V+  +++ G+C   R+ EA       R F  E  P   +YN +++ L
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-------RGFLAETVPVQASYNAVVHAL 232

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C         ++  EM     + G+  +PN VTY TI+D  CK   +  A  +  +M   
Sbjct: 233 CGEFRMWEVFSVVNEMV----QRGL--QPNVVTYTTIVDAFCKARELRMACAILARMVSM 286

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              P+V+T+T++++GF      ++A  ++  M+D+G  P  ++++V++  LC  G +  A
Sbjct: 287 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 346

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
                 M    + PN  TY+TL+DG+     +D A  ++  M+S+GC  +VV Y  +I+ 
Sbjct: 347 LDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV 406

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK    ++A SL  +ML     P  VT+NTL   L +  +V RAL +F  MRRN    +
Sbjct: 407 LCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 466

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN  + GL + G   +A  +   + ++ +EL++V+YN +I+ L
Sbjct: 467 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCL 512



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 6/379 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +S+N +   L        V S+   +   GL P++ T++ +++ FCK   +     +
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R++    TPN +TFT+L+KG   + ++ +A +++         P   +YN LI GLC 
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+ F  M            PN  TY+T++DG    G +D A  ++ +MK    
Sbjct: 340 IGDLKGALDFFNSMKRN------ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 393

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV YT++I   C    +++A+ L  +M+     P+ VTF+ ++  LC  G++ +A  
Sbjct: 394 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALN 453

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M   G +PN  TYN L+ G         A  + + M +NG    +V+YNT+IN  C
Sbjct: 454 VFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLC 513

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    + A+ L   M+ +GI+P   T+N +     +  +V  A  L  +M   +   +  
Sbjct: 514 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 573

Query: 465 TYNNFIDGLCKSGFVLEAL 483
            Y   I  LC  G +  A+
Sbjct: 574 AYTILISELCNQGKLSNAM 592



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 36/368 (9%)

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
            C  P    +  L+  L  E+ +     ++   R    +P+V+TYN LI  LC+      
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK----------------- 273
           A  + +EM+         C P+ V++ TI+ G+CK G V++A+                 
Sbjct: 176 ARKMLDEMSRKG------CHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVV 229

Query: 274 ----------ELFL---KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
                     E+F    +M    + P+VVTYT+++  FC A +   A  +   M+  G  
Sbjct: 230 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 289

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+V+TF+ ++    ++GK+  A  +   M+  G  P+T +YN LI G C    +  A   
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F SM+ N  + +  +Y+TL++ +    D++ A+ +++EM S G KP VV Y  +   L +
Sbjct: 350 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 409

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
               ++A  L D+M  ++   +T T+N  I  LC  G V  AL +F  +R +    N  +
Sbjct: 410 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 469

Query: 501 YNCLIDGL 508
           YN L+ GL
Sbjct: 470 YNELLHGL 477



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 171/350 (48%), Gaps = 7/350 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  I   M+ M  +P  ++   ++ G     K +D  LS++  +   G  P   ++++LI
Sbjct: 276 ACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA-LSMWHWMVDEGWAPSTISYNVLI 334

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C +G +         + R+   PNA T+++L+ G      +  A  ++ + +   C+
Sbjct: 335 RGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK 394

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V  Y  +I+ LC+      A +L ++M   N      C PNTVT+NT+I  LC  G V
Sbjct: 395 PNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN------CPPNTVTFNTLIGRLCDCGRV 448

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  +F  M+    +P+  TY  ++ G     +  +A  + IEM++ G +  +VT++ +
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 508

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ LC+      A  LL  M+ +G+ P+ +T+N +I  YC   K+  A  L   M +  C
Sbjct: 509 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNC 568

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
             +VV+Y  LI+  C    +  A+    +ML +GI P   T+N L   +F
Sbjct: 569 PRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 618



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 33/293 (11%)

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI-NPDVVTYTSVIRGFCYANDW 304
           GV C  + +     I    + G  D+A + F +  D    +P V  Y  ++      N  
Sbjct: 81  GVACTEDALV--AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMV 138

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
                ++  M   GV P+V T+++++  LC+N ++D A ++L+ M  +G +P+  ++ T+
Sbjct: 139 GAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTI 198

Query: 365 IDGYCLTDKIDHARKLFV------------------------------SMESNGCMHDVV 394
           + G C   +++ AR                                   M   G   +VV
Sbjct: 199 VSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVV 258

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y T+++ +CK +++  A ++ + M+S G  P V+T+  L  G FE  +V  AL ++  M
Sbjct: 259 TYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWM 318

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                A  T +YN  I GLC  G +  AL+ F +++ +    N  +Y+ L+DG
Sbjct: 319 VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 371



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 29/261 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++++ L    +     D  + ++  + S+G  P++  ++ +I+  CK         +
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 419

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + ++L     PN VTF +LI  LC   R+  A  +F   R   C P+  TYN L++GL R
Sbjct: 420 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFR 479

Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTVT 255
            G+   A  +  EM N   E  +V                              +P+  T
Sbjct: 480 EGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFT 539

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +N II   CKEG V  A  L  +M   N   +VV YT +I   C     + A    ++M+
Sbjct: 540 FNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKML 599

Query: 316 DQGVQPDVVTFSVIMDELCKN 336
            +G+ P+  T++V++  +  N
Sbjct: 600 YEGICPNEATWNVLVRAIFTN 620



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 1/152 (0%)

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
            L   G +D     L+ M  RGV          I  +      D A K F      GC  
Sbjct: 60  RLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 119

Query: 392 DVVS-YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
             V  YN L++   +   V   + +Y  M   G+ P V TYN L   L +  +V+ A K+
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            DEM R     D  ++   + G+CK G V EA
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 211



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N +  CL +       + L  R+   G+ PD +T + +I+ +CK G+VS    +LG++
Sbjct: 504 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 563

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N V +T LI  LC + ++  A     K       P+  T+N L+  +     T
Sbjct: 564 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGT 623

Query: 229 IVALNLFE 236
           I  ++LF+
Sbjct: 624 IGPIHLFK 631


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 224/456 (49%), Gaps = 44/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+ +    P V ++++L     K +  +TVL L + + + G+ P++Y+++I 
Sbjct: 303 EALEVYRVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 361

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    +  R    + +L ++      P+ +T T LI+ LC   RI +A  +F K +    
Sbjct: 362 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 421

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY TL++     G +   + ++  M A+G  +       N V Y  +ID LC+ G
Sbjct: 422 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVG 474

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM------------- 314
            V +A E+F +MK + I P+  +Y S+I GF  A+ + +A  LF  M             
Sbjct: 475 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 534

Query: 315 ----------------------MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                                   +G+ PDVV  + ++  L K+G++  A R+   +   
Sbjct: 535 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 594

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+P+T TY  +I       K D A K+F  M  N C+ DV++ N+LI+   K    +EA
Sbjct: 595 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 654

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             ++ ++    ++PT  TYNTL  GL    +V+  + L +EM  ++   +  TYN  +D 
Sbjct: 655 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 714

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+G V +AL++  ++       ++ SYN +I GL
Sbjct: 715 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 750



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 201/439 (45%), Gaps = 43/439 (9%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +SS+N +   L K + Y+   S+F ++    L PD  T   ++  F K+G +     +
Sbjct: 738  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHI 796

Query: 165  LGR--------------------ILRSCFTPNAVTFTS----------------LIKGLC 188
            +                      IL+      ++ F                  LIK LC
Sbjct: 797  IKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLC 856

Query: 189  AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
             + + +EA  L  K + F        YN+LI GL       +A  LF EM     E G  
Sbjct: 857  KQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK----ELG-- 910

Query: 249  CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            C P+  TYN ++D + K   +++  ++  +M  +      VTY ++I G   +    +A 
Sbjct: 911  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970

Query: 309  RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             L+  +M QG  P   T+  ++D L K G+++ A  L   M+  G   N   YN L++G+
Sbjct: 971  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 1030

Query: 369  CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             +    +    LF  M   G   D+ SY  +I+  CK   + + L+ + ++L  G++P +
Sbjct: 1031 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1090

Query: 429  VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            +TYN L  GL +  ++E A+ LF+EM++  +  + YTYN+ I  L K+G   EA +++  
Sbjct: 1091 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1150

Query: 489  IRDSKYELNIVSYNCLIDG 507
            +    ++ N+ +YN LI G
Sbjct: 1151 LLTKGWKPNVFTYNALIRG 1169



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 204/454 (44%), Gaps = 65/454 (14%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +  H   P V S+ I    L + K +D    +  ++ + G  PD+ TH++LI   C  GR
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 405

Query: 158 VSHGFVVLGRILRSCFTP-----------------------------------NAVTFTS 182
           +S    V  ++ +S   P                                   N V +T+
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 465

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM---- 238
           +I  LC   R+ EA  +F + +     P+ ++YN+LI+G  +      AL LF+ M    
Sbjct: 466 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 525

Query: 239 --ANGN---------GEFGVVCK--------------PNTVTYNTIIDGLCKEGFVDKAK 273
              NG          G+ G   K              P+ V  N ++ GL K G +  AK
Sbjct: 526 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 585

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +F ++K   ++PD +TYT +I+    A+ ++EA ++F +M++    PDV+  + ++D L
Sbjct: 586 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 645

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K G+ D+A R+   +    + P   TYNTL+ G     K+     L   M  +    ++
Sbjct: 646 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 705

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++YNT+++  CKN  V +AL +   M +KG  P + +YNT+  GL +  +   A  +F +
Sbjct: 706 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 765

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           M++  +  D  T    +    K G + EAL + +
Sbjct: 766 MKKVLI-PDYATLCTILPSFVKIGLMKEALHIIK 798



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R       V +F  +FG L       +       +  AG+  + YT++ L+   
Sbjct: 237 VFDVMQR-QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 295

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G       V   ++     P+  T++ L+        +     L  +      +P+V
Sbjct: 296 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 355

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           ++Y   I  L +      A  +  +M N        CKP+ +T+  +I  LC  G +  A
Sbjct: 356 YSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITHTVLIQVLCDAGRISDA 409

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K++F KMK  +  PD VTY +++  F    D      ++  M   G   +VV ++ ++D 
Sbjct: 410 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 469

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC+ G++ +A  + + M  +G+ P  Y+YN+LI G+   D+   A +LF  M+ +G   +
Sbjct: 470 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 529

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             ++   IN+Y K+ +  +A+  Y  M SKGI P VV  N +  GL +  ++  A ++F 
Sbjct: 530 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           E++   V+ DT TY   I    K+    EA+++F  + ++    ++++ N LID L
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 645



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 190/390 (48%), Gaps = 8/390 (2%)

Query: 89   EALCIF-DYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL I  DY L+        S  +++ G L K    +  +   + + S+G+  D +    
Sbjct: 792  EALHIIKDYFLQPGSKTDRSSCHSLMEGIL-KKAGIEKSIEFAEIIASSGITLDDFFLCP 850

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI   CK  +      ++ +      +     + SLI GL  E+ I  A  LF + +   
Sbjct: 851  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C PD FTYN L++ + ++      L + EEM     E         VTYNTII GL K  
Sbjct: 911  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE------STYVTYNTIISGLVKSR 964

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +++A +L+  +  +  +P   TY  ++ G   A    +A+ LF EM++ G + +   ++
Sbjct: 965  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 1024

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++++     G  +K   L + M+ +G+NP+  +Y  +ID  C   +++     F  +   
Sbjct: 1025 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1084

Query: 388  GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            G   D+++YN LI+   K+K +EEA+SL++EM  KGI P + TYN+L L L +  +   A
Sbjct: 1085 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1144

Query: 448  LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             K+++E+       + +TYN  I G   SG
Sbjct: 1145 GKMYEELLTKGWKPNVFTYNALIRGYSVSG 1174



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 156/317 (49%), Gaps = 6/317 (1%)

Query: 110  FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            +N L   L      D    LF  +   G  PD +T+++L++   K  R+     V   + 
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942

Query: 170  RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            R  +    VT+ ++I GL    R+ +A  L+         P   TY  L++GL + G   
Sbjct: 943  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002

Query: 230  VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             A NLF EM     E+G  CK N   YN +++G    G  +K   LF  M D+ INPD+ 
Sbjct: 1003 DAENLFNEML----EYG--CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIK 1056

Query: 290  TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            +YT +I   C A   N+    F ++++ G++PD++T+++++D L K+ ++++A  L   M
Sbjct: 1057 SYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 1116

Query: 350  IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              +G+ PN YTYN+LI       K   A K++  + + G   +V +YN LI  Y  +   
Sbjct: 1117 QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGST 1176

Query: 410  EEALSLYSEMLSKGIKP 426
            + A + Y  M+  G  P
Sbjct: 1177 DSAYAAYGRMIVGGCLP 1193



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 211/462 (45%), Gaps = 39/462 (8%)

Query: 77   SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
            +G+GD       EA  IF Y L+     P   ++N L   L +      V+ L + +  +
Sbjct: 648  AGRGD-------EAWRIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 699

Query: 137  GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
               P++ T++ +++C CK G V+    +L  +      P+  ++ ++I GL  E R  EA
Sbjct: 700  NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 759

Query: 197  AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN--------------------LFE 236
             ++F + +     PD  T  T++    + G    AL+                    L E
Sbjct: 760  FSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 818

Query: 237  EMANGNG-----EFGVVCKPNTVTYN-----TIIDGLCKEGFVDKAKELFLKMKDENINP 286
             +    G     EF  +   + +T +      +I  LCK+    +A EL  K K   ++ 
Sbjct: 819  GILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 878

Query: 287  DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
                Y S+I G    N  + A+ LF EM + G  PD  T+++++D + K+ ++++  ++ 
Sbjct: 879  KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 938

Query: 347  ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
            E M  +G      TYNT+I G   + +++ A  L+ ++ S G      +Y  L++   K 
Sbjct: 939  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 998

Query: 407  KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              +E+A +L++EML  G K     YN L  G       E+   LF +M    +  D  +Y
Sbjct: 999  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 1058

Query: 467  NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               ID LCK+G + + L  FR + +   E ++++YN LIDGL
Sbjct: 1059 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1100



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 11/415 (2%)

Query: 99  RMHP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM-- 155
           R+ P +PPP          +   +  D      +R  SA   P +   +   N   ++  
Sbjct: 167 RVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMR 226

Query: 156 --GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
             GRV     V   + R     N  TF ++  GL  E  +  A       +      + +
Sbjct: 227 GHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAY 286

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYN L+  L ++G    AL ++  M       GVV  P+  TY+ ++    K   V+   
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVL 340

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            L  +M+   + P+V +YT  IR    A  ++EA R+  +M ++G +PDV+T +V++  L
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C  G++  A  +   M      P+  TY TL+D +          +++ +M+++G   +V
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M  +    + YT+  FI+   KSG  ++A++ +  ++      ++V+ N ++ GL
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 575



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 41/249 (16%)

Query: 109  SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS--------- 159
            ++N +   L K++  +  + L+  L S G  P   T+  L++   K GR+          
Sbjct: 952  TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 1011

Query: 160  ----------------HGFVVLGRILRSC----------FTPNAVTFTSLIKGLCAESRI 193
                            +G  + G   + C            P+  ++T +I  LC   ++
Sbjct: 1012 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1071

Query: 194  MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
             +    F +      EPD+ TYN LI+GL ++     A++LF EM     + G+V  PN 
Sbjct: 1072 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ----KKGIV--PNL 1125

Query: 254  VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             TYN++I  L K G   +A +++ ++  +   P+V TY ++IRG+  +   + A   +  
Sbjct: 1126 YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGR 1185

Query: 314  MMDQGVQPD 322
            M+  G  P+
Sbjct: 1186 MIVGGCLPN 1194



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 6/148 (4%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + S+ I+   L K    +  L+ F++L   GL PD+ T+++LI+   K  R+     +
Sbjct: 1053 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1112

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               + +    PN  T+ SLI  L    +  EA  ++ +      +P+VFTYN LI G   
Sbjct: 1113 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1172

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPN 252
            +G T  A   +  M  G       C PN
Sbjct: 1173 SGSTDSAYAAYGRMIVGG------CLPN 1194


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 210/431 (48%), Gaps = 11/431 (2%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG-L 138
           G+  +I   +A+ IF Y ++     P   ++N +   L     Y+ V  L+  +++ G  
Sbjct: 170 GNAKMI--GKAITIF-YQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            PD  T+S LI+ FCK+GR      +L  +  +   P A  +T +I        +  A +
Sbjct: 227 HPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALS 286

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           LF + R   C PDVFTY  LI GL + G    A + + EM   +      CKP+TV  N 
Sbjct: 287 LFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQRED------CKPDTVVMNN 340

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG-FCYANDWNEAKRLFIEMMDQ 317
           +I+ L K G +D   +LF +M   +  P+VVTY ++I+  F   +  +E    F  M   
Sbjct: 341 MINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
           G+ P   T+S+++D  CK  +++KA  LLE M  +G  P    Y +LID      + D A
Sbjct: 401 GISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG 437
            +LF  ++ N        Y  +I    K   +++A++L+ EM   G  P V  YN L  G
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520

Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
           L     ++ AL    +M+ +    D  +YN  ++GL K+G    A+E+   +++S  + +
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580

Query: 498 IVSYNCLIDGL 508
            VSYN ++  L
Sbjct: 581 AVSYNTVLSAL 591



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 171/356 (48%), Gaps = 11/356 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRS---CFTPNAVTFTSLIKGLCAESRIMEAA 197
           D  T+  LI+C   + +    + ++  ++RS     TP  +  + +I+ L     I +A 
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTP--MELSQVIRMLGNAKMIGKAI 179

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
            +F + +   C+P    YN++I  L   G       L+ EM+N        C P+TVTY+
Sbjct: 180 TIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGH-----CHPDTVTYS 234

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
            +I   CK G  D A  L  +MK+  + P    YT +I  F   ++ + A  LF EM   
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYM 294

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
             +PDV T++ ++  L K G++D+A      M      P+T   N +I+      ++D  
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDG 354

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKD-VEEALSLYSEMLSKGIKPTVVTYNTLFL 436
            KLF  M  + C+ +VV+YNT+I    ++K  V E  S +  M   GI P+  TY+ L  
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILID 414

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
           G  + +++E+A+ L +EM           Y + ID L K+     A ELF+ ++++
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 6/286 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++ L +F+ M   H  P  V+   I+            V S F+R+  +G+ P  +T+SI
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSI 411

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+ FCK  R+    ++L  +    F P    + SLI  L    R   A  LF + +   
Sbjct: 412 LIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
                  Y  +I  L + G    A+NLF+EM+       + C PN   YN ++ GL +  
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK------LGCTPNVYAYNALMSGLARAC 525

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A     KM++    PD+ +Y  ++ G       + A  +   M +  ++PD V+++
Sbjct: 526 MLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYN 585

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
            ++  L   G  ++A+ L++ M   G   +  TY+++++     D+
Sbjct: 586 TVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 2/156 (1%)

Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ESNGCMHDVVSYNTLINWYCKNKDVE 410
           R    +T TY  LI    L ++     K+   M  S  C+   +  + +I      K + 
Sbjct: 117 RNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIG 176

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADTYTYNNF 469
           +A++++ ++ ++  +PT   YN++ + L    Q E+  +L++EM    H   DT TY+  
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSAL 236

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           I   CK G    A+ L   ++++  +     Y  +I
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMII 272


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 206/404 (50%), Gaps = 12/404 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++NI+   L +    +   +L+ ++   G+ P + +++ +I   CK G +     V+ 
Sbjct: 431 VVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMN 490

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            I+ S   PNA+T+T L++G   +     A  +F +       P  +T+N++INGLC+ G
Sbjct: 491 GIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVG 550

Query: 227 HTIVA---LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
               A   LN F + +           P ++TYN IIDG  KEG +D A+ ++ +M    
Sbjct: 551 RVSEARDKLNTFIKQS---------FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSE 601

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I+P+V+TYTS+I GFC +N  + A ++  +M  +G++ D+  ++ ++   CK   M+ A 
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENAC 661

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +    ++  G+ PNT  YN +I  Y   + ++ A  L   M +N    D+  Y +LI+  
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K   +  AL LYSEML +GI P +  YN L  GL    Q+E A K+  EM  N++    
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             YN  I G  K G + EA  L   + D     +  +Y+ L++G
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 217/430 (50%), Gaps = 13/430 (3%)

Query: 79  QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
           +GD+N      AL +FD ++ +  +P  V+ F++L    +K  + +    L+ R+   GL
Sbjct: 340 RGDVN-----SALRLFDEVVEVGVTPN-VAIFSVLIEWCSKIGNVEKANELYTRMKCMGL 393

Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
            P ++  + L+  F K   + + +++L   + +    + VT+  ++  LC   ++ EA  
Sbjct: 394 QPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACN 452

Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
           L+ K       P + +YN +I G C+ G     ++   E+ NG  E G+  KPN +TY  
Sbjct: 453 LWDKMIGKGITPSLVSYNHMILGHCKKG----CMDDAHEVMNGIIESGL--KPNAITYTI 506

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +++G  K+G  + A  +F +M    I P   T+ S+I G C     +EA+      + Q 
Sbjct: 507 LMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQS 566

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P  +T++ I+D   K G +D A  +   M    ++PN  TY +LI+G+C ++K+D A 
Sbjct: 567 FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLAL 626

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           K+   M+  G   D+  Y TLI  +CK +D+E A   +S++L  G+ P  + YN +    
Sbjct: 627 KMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAY 686

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
             ++ +E AL L  EM  N +  D   Y + IDGL K G +  AL+L+  +       +I
Sbjct: 687 RNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDI 746

Query: 499 VSYNCLIDGL 508
             YN LI+GL
Sbjct: 747 FMYNVLINGL 756



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 193/429 (44%), Gaps = 34/429 (7%)

Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
           +S++I+   + +    D    L +     G  P   T++ +I    ++G       +   
Sbjct: 258 ASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDE 317

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           ++ S    N    TSLIKG C    +  A  LF +       P+V  ++ LI    + G+
Sbjct: 318 MVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGN 377

Query: 228 TIVALNLFEEMA-------------------------------NGNGEFGVVCKPNTVTY 256
              A  L+  M                                +G  E G+    + VTY
Sbjct: 378 VEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA---SVVTY 434

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           N ++  LC+ G V++A  L+ KM  + I P +V+Y  +I G C     ++A  +   +++
Sbjct: 435 NIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIE 494

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            G++P+ +T++++M+   K G  + A  + + M+  G+ P  YT+N++I+G C   ++  
Sbjct: 495 SGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSE 554

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           AR    +      +   ++YN +I+ Y K   ++ A S+Y EM    I P V+TY +L  
Sbjct: 555 ARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLIN 614

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G  + ++++ ALK+ D+M+R  +  D   Y   I G CK   +  A + F  + +     
Sbjct: 615 GFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTP 674

Query: 497 NIVSYNCLI 505
           N + YN +I
Sbjct: 675 NTIVYNIMI 683



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 195/438 (44%), Gaps = 77/438 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V   N+L   + +    +    LF  +    ++ D YT  +L                
Sbjct: 185 PWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVL---------------- 228

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +R+C           +KG     + +EA   F +      + D  +Y+ +I  +CR
Sbjct: 229 ----MRAC-----------LKG----GKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCR 269

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                  L+L  ++  G+ E G V  P+  TY  +I    + G   +A  L  +M D  +
Sbjct: 270 GSD----LDLASKLVEGDEELGWV--PSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRV 323

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +V   TS+I+G+C   D N A RLF E+++ GV P+V  FSV+++   K G ++KA+ 
Sbjct: 324 PVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANE 383

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   M   G+ P  +  N L+ G+   + +++A  L      NG +  VV+YN ++ W C
Sbjct: 384 LYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASVVTYNIVLLWLC 442

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLG------LFEIHQV-------------- 444
           +   V EA +L+ +M+ KGI P++V+YN + LG      + + H+V              
Sbjct: 443 ELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI 502

Query: 445 ---------------ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                          E A  +FD+M    +    YT+N+ I+GLCK G V EA +     
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562

Query: 490 RDSKYELNIVSYNCLIDG 507
               +    ++YNC+IDG
Sbjct: 563 IKQSFIPTSMTYNCIIDG 580



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 137/331 (41%), Gaps = 40/331 (12%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           D   +N L+    R      A+  F  M     E GVV  P     N ++  + +   V+
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAML----EDGVV--PWVPFVNVLLTAMIRRNMVE 204

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            A  LF +M +  I  D  T   ++R       + EA+R F +   +G++ D  ++S+++
Sbjct: 205 DAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVI 264

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             +C+   +D AS+L+E     G  P+  TY  +I           A +L   M  +   
Sbjct: 265 QAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVP 324

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V    +LI  YC   DV  AL L+ E++  G+ P V  ++ L     +I  VE+A +L
Sbjct: 325 VNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANEL 384

Query: 451 FDEM-------------------RRNHVAADTY---------------TYNNFIDGLCKS 476
           +  M                   R+ ++  + Y               TYN  +  LC+ 
Sbjct: 385 YTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCEL 444

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G V EA  L+  +       ++VSYN +I G
Sbjct: 445 GKVNEACNLWDKMIGKGITPSLVSYNHMILG 475



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 6/241 (2%)

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
           E  V+ A+    K+ D  +      +  ++  +  AN   EA   F  M++ GV P V  
Sbjct: 136 ELLVECAERYGFKLSDSRV------FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPF 189

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            +V++  + +   ++ A RL + M  R +  + YT   L+       K   A + F    
Sbjct: 190 VNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAA 249

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   D  SY+ +I   C+  D++ A  L       G  P+  TY  +      +    
Sbjct: 250 GRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFG 309

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            AL+L DEM  + V  +     + I G C  G V  AL LF  + +     N+  ++ LI
Sbjct: 310 EALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLI 369

Query: 506 D 506
           +
Sbjct: 370 E 370



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 6/180 (3%)

Query: 335 KNGKMDKASRLLELMIWRGVNPNTY-TYNTLIDGYCLTDKIDHARKLFVSM----ESNGC 389
           K G    A  L  L+     NP T+     L++ Y   D    A+ L   +    E  G 
Sbjct: 88  KGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGDSAPAAKVLVELLVECAERYGF 147

Query: 390 -MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
            + D   +N L+  Y +   + EA+  +  ML  G+ P V   N L   +   + VE A 
Sbjct: 148 KLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAH 207

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +LFDEM    +  D YT    +    K G  +EA   F        +L+  SY+ +I  +
Sbjct: 208 RLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAV 267



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P    +NI+        + +  L+L K + +  +  D+  ++ LI+   K G++S    +
Sbjct: 674 PNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDL 733

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L     P+   +  LI GLC   ++  A  +  +       P V  YNTLI G  +
Sbjct: 734 YSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFK 793

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
            G+   A  L +EM +     G+V  P+  TY+ +++G
Sbjct: 794 EGNLQEAFRLHDEMLDK----GLV--PDDTTYDILVNG 825



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  +  +  L   L K       L L+  +   G+ PDI+ +++LIN  C  G++ +   
Sbjct: 708 PCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGK 767

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           +L  +  +  TP  + + +LI G   E  + EA  L  +       PD  TY+ L+NG
Sbjct: 768 ILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
 gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
          Length = 382

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 187/364 (51%), Gaps = 11/364 (3%)

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
           F  + S  + P+++  SILI+  CK  R          +  +    + V +T L+ GL  
Sbjct: 1   FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
           E R+ +A A+  + R   CEP+V TYN+LI+GLC+      A  LFE M +      V C
Sbjct: 61  EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS------VEC 114

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAK--ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
            P  VTYNT++DGL   G ++ A   EL   MK    +PDV+T T ++ G C  +    A
Sbjct: 115 SP-LVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAA 173

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
             +  EM+D G  P++VT   ++  LC+  ++  A  L+  M  RG  PN  TY TLIDG
Sbjct: 174 WEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 233

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
            C   ++  A  L+  M  +GC  DVV+Y+TLI+  CK   V+EA  L + M+  G   +
Sbjct: 234 LCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGTPSS 293

Query: 428 VVTYNTL-FLG-LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
            +TYN   F G + ++  +E+ + +  +        D +  N  +D   K G ++EA  +
Sbjct: 294 TLTYNLQHFEGKMVKVDSLEKGMAIHIQAAEKGYKRDDFLSNTLVDMYAKCGSMVEAERV 353

Query: 486 FRAI 489
           FR++
Sbjct: 354 FRSM 357



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 170/346 (49%), Gaps = 14/346 (4%)

Query: 94  FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
           FD M R +   P +   +IL   L K K    VL  F+ +  AG+  D   +++L++   
Sbjct: 1   FDEM-RSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLW 59

Query: 154 KMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
           K  R+     +L  +      PN VT+ SLI GLC  +    A  LF   +   C P + 
Sbjct: 60  KEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LV 118

Query: 214 TYNTLINGLCRTG--HTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           TYNTL++GL  TG   + +A+ L E M A G       C P+ +T   ++DGLCKE  V 
Sbjct: 119 TYNTLLDGLFWTGKLESAMAVELLESMKARG-------CSPDVITSTILVDGLCKESKVA 171

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            A E+  +M D    P++VT  S++ G C A   ++A  L  +M  +G  P+VVT+  ++
Sbjct: 172 AAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 231

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
           D LCK G++  A  L E+M   G + +  TY+TLIDG C   ++D A  L   M   G  
Sbjct: 232 DGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGTP 291

Query: 391 HDVVSYNT--LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
              ++YN         K   +E+ ++++ +   KG K      NTL
Sbjct: 292 SSTLTYNLQHFEGKMVKVDSLEKGMAIHIQAAEKGYKRDDFLSNTL 337



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 139/276 (50%), Gaps = 9/276 (3%)

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F+EM + N        PN    + +IDGLCK          F  M+   I  D V YT +
Sbjct: 1   FDEMRSNN------MVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVL 54

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           + G       ++A  +  EM D G +P+VVT++ ++D LCKN + D+A  L E M     
Sbjct: 55  LSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVEC 114

Query: 355 NPNTYTYNTLIDGYCLTDKIDHAR--KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           +P   TYNTL+DG   T K++ A   +L  SM++ GC  DV++   L++  CK   V  A
Sbjct: 115 SP-LVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAA 173

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +  EML  G  P +VT  +L  GL    +V  AL L  +M       +  TY   IDG
Sbjct: 174 WEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 233

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK G V +A  L+  +     + ++V+Y+ LIDGL
Sbjct: 234 LCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGL 269



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 153/319 (47%), Gaps = 47/319 (14%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS--LFKRLNSAGLFPDIYT 144
           P+ A  +F++M  +  SP  + ++N L   L      ++ ++  L + + + G  PD+ T
Sbjct: 99  PDRAQELFEHMKSVECSP--LVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVIT 156

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +IL++  CK  +V+  + VL  +L +   PN VT  SL+ GLC   R+ +A AL     
Sbjct: 157 STILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMT 216

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
              C P+V TY TLI+GLC+ G    A NL+E M  G+G     C  + VTY+T+IDGLC
Sbjct: 217 CRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVM-TGDG-----CDADVVTYSTLIDGLC 270

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           K G VD+A  L  +M         +TY   ++ F       E K + ++ +++G+   + 
Sbjct: 271 KGGRVDEAHLLLARMVRMGTPSSTLTYN--LQHF-------EGKMVKVDSLEKGMAIHI- 320

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
                           +A+        +G   + +  NTL+D Y     +  A ++F SM
Sbjct: 321 ----------------QAAE-------KGYKRDDFLSNTLVDMYAKCGSMVEAERVFRSM 357

Query: 385 ESNGCMHDVVSYNTLINWY 403
                 H +VS+  L+  Y
Sbjct: 358 PC----HSLVSWTVLMLGY 372


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 207/426 (48%), Gaps = 8/426 (1%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           NL    E L ++  M + +   P + S+N L   L  +K  ++   +F+ + +  + PD+
Sbjct: 191 NLGMVEEVLWVWRRM-KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDV 249

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
            T++ +I  +C++G+    F  L  +      P+ +T+ +LI+   AE        L+ +
Sbjct: 250 VTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHE 309

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 E     Y+ +I GLC+ G  +    +FE M +        CK N   Y  +ID 
Sbjct: 310 MDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKG------CKANVAIYTALIDS 363

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
             K G + +A  LF +MK E + PD VTY  ++   C +   +EA         +GV  +
Sbjct: 364 NAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVN 423

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            + +S ++D L K+G++D+A R+   M+ +G  P++Y YN LID      KID A  L  
Sbjct: 424 AMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSK 483

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ME +GC   V +Y  LI    +    EEAL+L+  M+ KGI PT   +  L  GL    
Sbjct: 484 RMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSG 543

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           +V RA K+ DEM    V  +T  +++ I+ LCK+G + EA +L   I D   E+      
Sbjct: 544 KVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRT 602

Query: 503 CLIDGL 508
            LI+ L
Sbjct: 603 VLINAL 608



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 191/431 (44%), Gaps = 33/431 (7%)

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P+ A+  F +  +       +  +  L   LA N   D+V S+F +    GL   +Y+ +
Sbjct: 124 PDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSN 183

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI  F  +G V     V  R+  +   P+  ++  L+ GL     I  A  +F      
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------------GEF--- 245
              PDV TYNT+I G C  G T  A    + M   N                  G+F   
Sbjct: 244 KIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSC 303

Query: 246 ----------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                     G+   P+   Y+ +I GLCK+G   +   +F  M  +    +V  YT++I
Sbjct: 304 LGLYHEMDEKGLEIPPHV--YSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALI 361

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
                  +  EA  LF  M  +G++PD VT+ VI++ LCK+G++D+A   +E    +GV 
Sbjct: 362 DSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVA 421

Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
            N   Y++LIDG   + ++D A ++F  M   GC  D   YN LI+   K   ++EAL+L
Sbjct: 422 VNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALAL 481

Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
              M   G   TV TY  L  GLF  H+ E AL L+D M    +      +     GLC 
Sbjct: 482 SKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCL 541

Query: 476 SGFVLEALELF 486
           SG V  A ++ 
Sbjct: 542 SGKVARACKIL 552



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 164/349 (46%), Gaps = 8/349 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           +P  ++   ++  C A+   +D+ L L+  ++  GL    + +S++I   CK G+   G+
Sbjct: 281 APDKITYMTLIQACYAEG-DFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGY 339

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   ++      N   +T+LI        + EA  LF + +    EPD  TY  ++N L
Sbjct: 340 TVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSL 399

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C++G    AL  + E  +G G        N + Y+++IDGL K G VD+A+ +F +M  +
Sbjct: 400 CKSGRLDEALE-YMEFCSGKG-----VAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKK 453

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              PD   Y ++I         +EA  L   M   G    V T+++++  L +  + ++A
Sbjct: 454 GCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEA 513

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L +LMI +G+ P    +  L  G CL+ K+  A K+   M   G + +  +++ +IN 
Sbjct: 514 LTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINI 572

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
            CK   ++EA  L   ++ +G +        L   L +    + ALKL 
Sbjct: 573 LCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLM 621



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 42/282 (14%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+ +  L    AK  +    + LFKR+   GL PD  T+ +++N  CK GR+      + 
Sbjct: 354 VAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYME 413

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
                    NA+ ++SLI GL    R+ EA  +F +     C PD + YN LI+ L + G
Sbjct: 414 FCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCG 473

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL L + M          C     TY  +I GL +E   ++A  L+  M D+ I P
Sbjct: 474 KIDEALALSKRMEVDG------CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITP 527

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM------- 339
               + ++  G C +     A ++  EM   GV P+   F  +++ LCK G++       
Sbjct: 528 TAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLA 586

Query: 340 ----------------------------DKASRLLELMIWRG 353
                                       D A +L+   I  G
Sbjct: 587 DGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIG 628


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 212/451 (47%), Gaps = 52/451 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V SFN +     K    D   S F  +   GL P +Y+H+ILIN  C +G ++    +
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    P++VT+  L+KG      I  A  +          PDV TY  L+ G C+
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G+  + L L ++M +   E       + + Y+ ++ GLCK G VD+A  LF  ++   +
Sbjct: 359 LGNIDMGLILLKDMLSRGFEL-----KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGL 413

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP----------------------- 321
            PD+V Y+ VI G C    ++ A R++ EM  + + P                       
Sbjct: 414 TPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARS 473

Query: 322 ------------DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                       D++ +++++D   K+G +++A  L ++ I  G+ PN  T+N+LI GYC
Sbjct: 474 LLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYC 533

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            T  I  ARK+   ++  G +  VVSY TL++ Y     ++    L  EM ++GI PT V
Sbjct: 534 KTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNV 593

Query: 430 TYNTLFLGLFE------IHQV--ERALKLFD----EMRRNHVAADTYTYNNFIDGLCKSG 477
           TY+ +F GL         +QV  ER L+ F+    +M    +  D  TYN  I  LC+  
Sbjct: 594 TYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVK 653

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  A ELF+ ++    +    +YN LID L
Sbjct: 654 HLSRAFELFKKMKSQNLDPTSATYNILIDSL 684



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 212/454 (46%), Gaps = 50/454 (11%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLS----LFKRLNSAGLFPDIYTHSILINCFCKMG 156
           H   P   ++NIL     K  H   ++S    + + +   GL PD+ T++IL+   C++G
Sbjct: 305 HGVEPDSVTYNIL----VKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLG 360

Query: 157 RVSHGFVVLGRILRSCFTPNAVT-FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
            +  G ++L  +L   F   ++  ++ ++ GLC   R+ EA +LF     +   PD+  Y
Sbjct: 361 NIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAY 420

Query: 216 NTLINGLCRTGHTIVALNLFEEMAN---------------GNGEFGVVCKPNT------- 253
           + +I+GLC+ G   +A+ +++EM                 G  + G++ +  +       
Sbjct: 421 SIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLIS 480

Query: 254 -------VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
                  + YN +IDG  K G +++A ELF    +  I P+V T+ S+I G+C   +  E
Sbjct: 481 SGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAE 540

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A+++   +   G+ P VV+++ +MD     G +     L   M   G+ P   TY+ +  
Sbjct: 541 ARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFK 600

Query: 367 GYCLTDKIDHARKLFVS------------MESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
           G C   K+++  ++               MES G   D ++YNT+I + C+ K +  A  
Sbjct: 601 GLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFE 660

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ +M S+ + PT  TYN L   L     + +A +    +++ +V+   + Y   I   C
Sbjct: 661 LFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHC 720

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             G    A+ LF  + D  + ++I  Y+ +I+ L
Sbjct: 721 VKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRL 754



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 187/405 (46%), Gaps = 21/405 (5%)

Query: 119 KNKH-YDTVLSLF---KRLNSAGLF----------PDIYTHSILINCFCKMGRVSHGFVV 164
           KN+H Y TV+      ++L  A LF          P + + + +++ +CK+G V      
Sbjct: 204 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSF 263

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+    P+  +   LI GLC    I EA  L +       EPD  TYN L+ G   
Sbjct: 264 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHL 323

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  + ++M +          P+ +TY  ++ G C+ G +D    L   M     
Sbjct: 324 LGMISGAGEVIQDMLDKG------LSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGF 377

Query: 285 N-PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
               ++ Y+ ++ G C     +EA  LF ++   G+ PD+V +S+++  LCK GK D A 
Sbjct: 378 ELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAV 437

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           R+ + M ++ + PN+ T   ++ G C    +  AR L  S+ S+G   D++ YN +I+ Y
Sbjct: 438 RVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGY 497

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K+  +EEAL L+   +  GI P V T+N+L  G  +   +  A K+ D ++   +    
Sbjct: 498 AKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSV 557

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +Y   +D     G +    EL R ++        V+Y+ +  GL
Sbjct: 558 VSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGL 602



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 41/396 (10%)

Query: 80  GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
           G   L   +  L +   ML        +  ++++   L K    D  LSLF  L + GL 
Sbjct: 355 GQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLT 414

Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
           PD+  +SI+I+  CK+G+      V   +      PN+ T  +++ GLC +  ++EA +L
Sbjct: 415 PDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSL 474

Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFE---------EMANGNGEFGVVCK 250
                      D+  YN +I+G  ++G    AL LF+          +A  N      CK
Sbjct: 475 LDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCK 534

Query: 251 --------------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
                               P+ V+Y T++D     G +   +EL  +MK E I P  VT
Sbjct: 535 TQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVT 594

Query: 291 YTSVIRGFCYA---NDWNEAKRLFI---------EMMDQGVQPDVVTFSVIMDELCKNGK 338
           Y+ + +G C      + N+  R  I         +M  +G+ PD +T++ I+  LC+   
Sbjct: 595 YSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKH 654

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + +A  L + M  + ++P + TYN LID  C+   I  A +   S++         +Y T
Sbjct: 655 LSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTT 714

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           +I  +C   D E A+ L++++L +G   ++  Y+ +
Sbjct: 715 VIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAV 750



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 157/349 (44%), Gaps = 19/349 (5%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ ++D M      P   +   I+ G   K    +   SL   L S+G   DI  ++I+I
Sbjct: 436 AVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEA-RSLLDSLISSGDTLDIILYNIVI 494

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           + + K G +     +    + S  TPN  TF SLI G C    I EA  +    +++   
Sbjct: 495 DGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLV 554

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK---- 265
           P V +Y TL++     G    ++   EE+       G+   P  VTY+ I  GLC+    
Sbjct: 555 PSVVSYTTLMDAYANCG----SIKSIEELRREMKAEGI--PPTNVTYSVIFKGLCRGWKL 608

Query: 266 --------EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
                   E  ++K   +   M+ E I PD +TY ++I+  C     + A  LF +M  Q
Sbjct: 609 ENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQ 668

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            + P   T+++++D LC  G + KA R L  +  R V+ + + Y T+I  +C+    + A
Sbjct: 669 NLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMA 728

Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
             LF  +   G    +  Y+ +IN  C+     E+   +  MLS+GI P
Sbjct: 729 VILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISP 777



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 8/242 (3%)

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD++  +  KMKD N+N    +Y SV+  F    + ++   ++ E+ D+       T+S
Sbjct: 158 MVDESLYILKKMKDRNLNVSTQSYNSVLYNF---RETDKMWDVYKEIKDKNEH----TYS 210

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++D LC+  K++ A   L    W+ + P+  ++N+++  YC    +D A+  F ++   
Sbjct: 211 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKC 270

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G +  V S+N LIN  C    + EAL L S+M   G++P  VTYN L  G   +  +  A
Sbjct: 271 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGA 330

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL-NIVSYNCLID 506
            ++  +M    ++ D  TY   + G C+ G +   L L + +    +EL +I+ Y+ ++ 
Sbjct: 331 GEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLS 390

Query: 507 GL 508
           GL
Sbjct: 391 GL 392


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 224/456 (49%), Gaps = 44/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+ +    P V ++++L     K +  +TVL L + + + G+ P++Y+++I 
Sbjct: 213 EALEVYRVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 271

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    +  R    + +L ++      P+ +T T LI+ LC   RI +A  +F K +    
Sbjct: 272 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 331

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY TL++     G +   + ++  M A+G  +       N V Y  +ID LC+ G
Sbjct: 332 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVG 384

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM------------- 314
            V +A E+F +MK + I P+  +Y S+I GF  A+ + +A  LF  M             
Sbjct: 385 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 444

Query: 315 ----------------------MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                                   +G+ PDVV  + ++  L K+G++  A R+   +   
Sbjct: 445 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 504

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+P+T TY  +I       K D A K+F  M  N C+ DV++ N+LI+   K    +EA
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             ++ ++    ++PT  TYNTL  GL    +V+  + L +EM  ++   +  TYN  +D 
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+G V +AL++  ++       ++ SYN +I GL
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 203/454 (44%), Gaps = 65/454 (14%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +  H   P V S+ I    L + K +D    +  ++ + G  PD+ TH++LI   C  GR
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 315

Query: 158 VSHGFVVLGRILRSCFTP-----------------------------------NAVTFTS 182
           +S    V  ++ +S   P                                   N V +T+
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 375

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM---- 238
           +I  LC   R+ EA  +F + +     P+ ++YN+LI+G  +      AL LF+ M    
Sbjct: 376 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 435

Query: 239 -----------ANGNGEFGVVCK--------------PNTVTYNTIIDGLCKEGFVDKAK 273
                       N  G+ G   K              P+ V  N ++ GL K G +  AK
Sbjct: 436 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 495

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +F ++K   ++PD +TYT +I+    A+ ++EA ++F +M++    PDV+  + ++D L
Sbjct: 496 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 555

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K G+ D+A R+   +    + P   TYNTL+ G     K+     L   M  +    ++
Sbjct: 556 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 615

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++YNT+++  CKN  V +AL +   M +KG  P + +YNT+  GL +  +   A  +F +
Sbjct: 616 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 675

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           M++  +  D  T    +    K G + EAL + +
Sbjct: 676 MKKVLI-PDYATLCTILPSFVKIGLMKEALHIIK 708



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R       V +F  +FG L       +       +  AG+  + YT++ L+   
Sbjct: 147 VFDVMQR-QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 205

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G       V   ++     P+  T++ L+        +     L  +      +P+V
Sbjct: 206 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 265

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           ++Y   I  L +      A  +  +M N        CKP+ +T+  +I  LC  G +  A
Sbjct: 266 YSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITHTVLIQVLCDAGRISDA 319

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K++F KMK  +  PD VTY +++  F    D      ++  M   G   +VV ++ ++D 
Sbjct: 320 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 379

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC+ G++ +A  + + M  +G+ P  Y+YN+LI G+   D+   A +LF  M+ +G   +
Sbjct: 380 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             ++   IN+Y K+ +  +A+  Y  M SKGI P VV  N +  GL +  ++  A ++F 
Sbjct: 440 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           E++   V+ DT TY   I    K+    EA+++F  + ++    ++++ N LID L
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 555



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 201/474 (42%), Gaps = 77/474 (16%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V+   +LFG LAK+        +F  L + G+ PD  T++++I C  K  +      
Sbjct: 473 PDVVAGNAVLFG-LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 531

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   ++ +   P+ +   SLI  L    R  EA  +F + +    EP   TYNTL+ GL 
Sbjct: 532 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLG 591

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM---- 279
           R G     ++L EEM + N        PN +TYNTI+D LCK G V+ A ++   M    
Sbjct: 592 REGKVKEVMHLLEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 645

Query: 280 ----------------KDENIN--------------PDVVTYTSVIRGFCYANDWNEA-- 307
                           K+E  N              PD  T  +++  F       EA  
Sbjct: 646 CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALH 705

Query: 308 --------------------------KRLFIE--------MMDQGVQPDVVTFSVIMDEL 333
                                     K+  IE        +   G+  D      ++  L
Sbjct: 706 IIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 765

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK  K  +A  L++     GV+  T  YN+LI G    + ID A  LF  M+  GC  D 
Sbjct: 766 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 825

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +YN L++   K+  +EE L +  EM  KG + T VTYNT+  GL +  ++E+A+ L+  
Sbjct: 826 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +     +    TY   +DGL K+G + +A  LF  + +   + N   YN L++G
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 939



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 11/415 (2%)

Query: 99  RMHP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM-- 155
           R+ P +PPP          +   +  D      +R  SA   P +   +   N   ++  
Sbjct: 77  RVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMR 136

Query: 156 --GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
             GRV     V   + R     N  TF ++  GL  E  +  A       +      + +
Sbjct: 137 GHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAY 196

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYN L+  L ++G    AL ++  M       GVV  P+  TY+ ++    K   V+   
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVL 250

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            L  +M+   + P+V +YT  IR    A  ++EA R+  +M ++G +PDV+T +V++  L
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C  G++  A  +   M      P+  TY TL+D +          +++ +M+++G   +V
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M  +    + YT+  FI+   KSG  ++A++ +  ++      ++V+ N ++ GL
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 485



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 196/430 (45%), Gaps = 14/430 (3%)

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +G+GD       EA  IF Y L+     P   ++N L   L +      V+ L + +  +
Sbjct: 558 AGRGD-------EAWRIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 609

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
              P++ T++ +++C CK G V+    +L  +      P+  ++ ++I GL  E R  EA
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
            ++F + +     PD  T  T++    + G    AL++ ++     G      K +  + 
Sbjct: 670 FSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGS-----KTDRSSC 723

Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
           +++++G+ K+  ++K+ E    +    I  D      +I+  C      EA  L  +   
Sbjct: 724 HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 783

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
            GV      ++ ++  L     +D A  L   M   G  P+ +TYN L+D    + +I+ 
Sbjct: 784 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 843

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
             K+   M   G     V+YNT+I+   K++ +E+A+ LY  ++S+G  PT  TY  L  
Sbjct: 844 MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 903

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           GL +  ++E A  LF+EM      A+   YN  ++G   +G   +   LF+ + D     
Sbjct: 904 GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 963

Query: 497 NIVSYNCLID 506
           +I SY  +ID
Sbjct: 964 DIKSYTIIID 973


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 201/402 (50%), Gaps = 8/402 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K   Y   L L  ++ S G+  D  T+++L++  CK  R + G+++
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLL 260

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ +   +PN +T+ S+I G   E +I  A  +F +  +    P+  TYN LI+G C 
Sbjct: 261 LKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCH 320

Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            G+   AL + E M A G        KPN V+Y+ +++GLC+    + +K +  +M+   
Sbjct: 321 DGNFEQALTILEMMEATGP-------KPNEVSYSALLNGLCRHAKFELSKSILERMRMNG 373

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +    + YT++I G C     NE+ +L  +M+  GV PDVVTFSV+++  C+ GK+    
Sbjct: 374 MIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVK 433

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            ++  M   G+ PN+  Y TLI  YC T  +  A K++V+M   G   +    N L++  
Sbjct: 434 EIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSL 493

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK+  V  A   +  M   G  P  +T++ +  G        +A  +FDEM +       
Sbjct: 494 CKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSH 553

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +TY   +  LC++G   EA  L   +      ++ V+YN ++
Sbjct: 554 FTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTIL 595



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 207/419 (49%), Gaps = 11/419 (2%)

Query: 93  IFDYMLRMHP---SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           +F  ++  +P   S P V  F++L     +       L  F+ +   G  P +YT ++L+
Sbjct: 83  VFGALMNTYPLCKSNPSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLL 140

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
               K  +V   ++    +L     P+  TF  LI  LC E ++ +A  L  K       
Sbjct: 141 GKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYV 200

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P V TYNT++N  C+ G    AL L ++M    G  G+  + +  TYN ++D LCK    
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQM----GSKGI--EADACTYNMLVDDLCKNNRS 254

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            K   L  KM+   I+P+ +TY S+I GF        A R+F EM    + P+ VT++ +
Sbjct: 255 AKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNAL 314

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +D  C +G  ++A  +LE+M   G  PN  +Y+ L++G C   K + ++ +   M  NG 
Sbjct: 315 IDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGM 374

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
           +   ++Y  +I+  C+N  + E++ L  +ML  G+ P VVT++ L  G   + +++   +
Sbjct: 375 IVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKE 434

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +M +  +A ++  Y   I   CK+G V+EA +++ A+    Y+ N    N L+  L
Sbjct: 435 IICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSL 493



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 199/403 (49%), Gaps = 6/403 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N+L G L K +    V   FK + +  + PD+ T +ILIN  C  G++     +
Sbjct: 131 PSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYL 190

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++  S + P+ VT+ +++   C + R   A  L  +      E D  TYN L++ LC+
Sbjct: 191 LKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCK 250

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
              +     L ++M         +  PN +TYN+II+G  KEG +  A  +F +M   N+
Sbjct: 251 NNRSAKGYLLLKKMRKR------MISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNL 304

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ VTY ++I G C+  ++ +A  +   M   G +P+ V++S +++ LC++ K + +  
Sbjct: 305 LPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKS 364

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +LE M   G+      Y  +IDG C    ++ + KL   M  +G + DVV+++ LIN +C
Sbjct: 365 ILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFC 424

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   ++    +  +M   G+ P  + Y TL     +   V  A K++  M R    A+ +
Sbjct: 425 RVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCF 484

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             N  +  LCK G V  A   F  +       N ++++C+I+G
Sbjct: 485 ICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIING 527



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 196/404 (48%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P VS+FNIL   L           L K++  +G  P + T++ ++N +CK GR      +
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALEL 225

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           + ++       +A T+  L+  LC  +R  +   L  K R     P+  TYN++ING  +
Sbjct: 226 IDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVK 285

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +F+EM+  N        PN VTYN +IDG C +G  ++A  +   M+    
Sbjct: 286 EGKIGAATRIFQEMSMLN------LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V+Y++++ G C    +  +K +   M   G+    + ++ ++D LC+NG ++++ +
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M+  GV P+  T++ LI+G+C   KI + +++   M   G   + + Y TLI  YC
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  DV EA  +Y  M   G        N L   L +  +V  A   F  M +     ++ 
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T++  I+G   SG  L+A  +F  +  + +  +  +Y  L+  L
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 185/404 (45%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L      + +++  L++ + + + G  P+  ++S L+N  C+  +      +
Sbjct: 306 PNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSI 365

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R+  +      + +T++I GLC    + E+  L  K       PDV T++ LING CR
Sbjct: 366 LERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCR 425

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G       +  +M      +     PN++ Y T+I   CK G V +A ++++ M     
Sbjct: 426 VGKIKNVKEIICKM------YKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGY 479

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           + +      ++   C       A+  F  M   G  P+ +TF  I++    +G   KA  
Sbjct: 480 DANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFS 539

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           + + MI  G +P+ +TY  L+   C   K   A++L   +       D V+YNT++    
Sbjct: 540 MFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETF 599

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE-MRRNHVAADT 463
           K+  + +A++L+ EM+ + + P   TY  +F GL    ++  AL  +   + +  V+ + 
Sbjct: 600 KSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEK 659

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             Y  F+DGL ++G    AL     +  +    ++++ N +++G
Sbjct: 660 VMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNG 703



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 188/416 (45%), Gaps = 22/416 (5%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           PS     ++N +     K+      ++LF  +    + PD YT++I+     + G++   
Sbjct: 583 PSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAA 642

Query: 162 FVVLGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE--------PDV 212
               G +L +   +P  V +T+ + GL    +        +K  ++ CE         D+
Sbjct: 643 LHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQ--------SKAALYFCEDMEKNGLCADL 694

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
              N ++NG  R G    A ++F  M +G     +   P+  TYN ++ G  K+  + K 
Sbjct: 695 IATNVILNGYSRMGKMAKAGDIFTMMWSG-----ITISPSLATYNILLHGYAKKKNLSKC 749

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L+  M    I PD +T  S+I GFC +   +   +L  +M+  GV  D  TF++++ +
Sbjct: 750 SNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMK 809

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C+  ++ KA  L+ +M    + P+  T++++I        +  +  L   M   GC+ D
Sbjct: 810 YCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPD 869

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
              Y  L+N  C+   +  A  L  EM + GI    V  + L  GL +  +VE A  + D
Sbjct: 870 RRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLD 929

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            M R  +     T+   +   C++  ++EAL+L   +     +L++++YN LI GL
Sbjct: 930 FMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGL 985



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 6/300 (2%)

Query: 140  PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
            P + T++IL++ + K   +S    +   ++R+   P+ +T  SLI G C  + +     L
Sbjct: 728  PSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKL 787

Query: 200  FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
              K  +     D  T+N LI   C T     A +L   M      F +   P+  T+++I
Sbjct: 788  LKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIM----NLFDIF--PDMTTHDSI 841

Query: 260  IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
            I  L +   V ++  L  +M +    PD   Y +++   C     + A +L  EM   G+
Sbjct: 842  ISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901

Query: 320  QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
                V  S ++  L K GK+++A  +L+ M+ + + P   T+ TL+  +C  + +  A K
Sbjct: 902  SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK 961

Query: 380  LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
            L  +M+      DV++YN LI+  C + DV  AL LY E+  +G+ P + TY  L   +F
Sbjct: 962  LKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIF 1021



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 135/310 (43%), Gaps = 41/310 (13%)

Query: 93   IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
            IF  M       P ++++NIL    AK K+     +L+  +   G+FPD  T   LI  F
Sbjct: 716  IFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGF 775

Query: 153  CKMGRVSHGFVVLGR----------------ILRSCFT-------------------PNA 177
            CK   +  G  +L +                I++ C T                   P+ 
Sbjct: 776  CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDM 835

Query: 178  VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
             T  S+I  L   S + E+  L  +     C PD   Y  L+N +CR GH   A  L +E
Sbjct: 836  TTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDE 895

Query: 238  MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
            M       G+      V  + ++ GL K G V++AK +   M  +++ P + T+T+++  
Sbjct: 896  ME----ALGI--SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHM 949

Query: 298  FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
            FC      EA +L   M    V+ DV+ ++V++  LC +G +  A +L + +  RG+ PN
Sbjct: 950  FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPN 1009

Query: 358  TYTYNTLIDG 367
              TY  LID 
Sbjct: 1010 MTTYCILIDA 1019


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 224/456 (49%), Gaps = 44/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+ +    P V ++++L     K +  +TVL L + + + G+ P++Y+++I 
Sbjct: 178 EALEVYRVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 236

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    +  R    + +L ++      P+ +T T LI+ LC   RI +A  +F K +    
Sbjct: 237 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 296

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY TL++     G +   + ++  M A+G  +       N V Y  +ID LC+ G
Sbjct: 297 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVG 349

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM------------- 314
            V +A E+F +MK + I P+  +Y S+I GF  A+ + +A  LF  M             
Sbjct: 350 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 409

Query: 315 ----------------------MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                                   +G+ PDVV  + ++  L K+G++  A R+   +   
Sbjct: 410 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 469

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+P+T TY  +I       K D A K+F  M  N C+ DV++ N+LI+   K    +EA
Sbjct: 470 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 529

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             ++ ++    ++PT  TYNTL  GL    +V+  + L +EM  ++   +  TYN  +D 
Sbjct: 530 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 589

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+G V +AL++  ++       ++ SYN +I GL
Sbjct: 590 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 625



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 201/439 (45%), Gaps = 43/439 (9%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +SS+N +   L K + Y+   S+F ++    L PD  T   ++  F K+G +     +
Sbjct: 613  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHI 671

Query: 165  LGR--------------------ILRSCFTPNAVTFTS----------------LIKGLC 188
            +                      IL+      ++ F                  LIK LC
Sbjct: 672  IKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLC 731

Query: 189  AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
             + + +EA  L  K + F        YN+LI GL       +A  LF EM     E G  
Sbjct: 732  KQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK----ELG-- 785

Query: 249  CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            C P+  TYN ++D + K   +++  ++  +M  +      VTY ++I G   +    +A 
Sbjct: 786  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845

Query: 309  RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             L+  +M QG  P   T+  ++D L K G+++ A  L   M+  G   N   YN L++G+
Sbjct: 846  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 905

Query: 369  CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             +    +    LF  M   G   D+ SY  +I+  CK   + + L+ + ++L  G++P +
Sbjct: 906  RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 965

Query: 429  VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            +TYN L  GL +  ++E A+ LF+EM++  +  + YTYN+ I  L K+G   EA +++  
Sbjct: 966  ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1025

Query: 489  IRDSKYELNIVSYNCLIDG 507
            +    ++ N+ +YN LI G
Sbjct: 1026 LLTKGWKPNVFTYNALIRG 1044



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 203/454 (44%), Gaps = 65/454 (14%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +  H   P V S+ I    L + K +D    +  ++ + G  PD+ TH++LI   C  GR
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 280

Query: 158 VSHGFVVLGRILRSCFTP-----------------------------------NAVTFTS 182
           +S    V  ++ +S   P                                   N V +T+
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 340

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM---- 238
           +I  LC   R+ EA  +F + +     P+ ++YN+LI+G  +      AL LF+ M    
Sbjct: 341 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 400

Query: 239 -----------ANGNGEFGVVCK--------------PNTVTYNTIIDGLCKEGFVDKAK 273
                       N  G+ G   K              P+ V  N ++ GL K G +  AK
Sbjct: 401 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 460

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +F ++K   ++PD +TYT +I+    A+ ++EA ++F +M++    PDV+  + ++D L
Sbjct: 461 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 520

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K G+ D+A R+   +    + P   TYNTL+ G     K+     L   M  +    ++
Sbjct: 521 YKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 580

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++YNT+++  CKN  V +AL +   M +KG  P + +YNT+  GL +  +   A  +F +
Sbjct: 581 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 640

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           M++  +  D  T    +    K G + EAL + +
Sbjct: 641 MKKVLI-PDYATLCTILPSFVKIGLMKEALHIIK 673



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R       V +F  +FG L       +       +  AG+  + YT++ L+   
Sbjct: 112 VFDVMQR-QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 170

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G       V   ++     P+  T++ L+        +     L  +      +P+V
Sbjct: 171 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 230

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           ++Y   I  L +      A  +  +M N        CKP+ +T+  +I  LC  G +  A
Sbjct: 231 YSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITHTVLIQVLCDAGRISDA 284

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K++F KMK  +  PD VTY +++  F    D      ++  M   G   +VV ++ ++D 
Sbjct: 285 KDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDA 344

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC+ G++ +A  + + M  +G+ P  Y+YN+LI G+   D+   A +LF  M+ +G   +
Sbjct: 345 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 404

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             ++   IN+Y K+ +  +A+  Y  M SKGI P VV  N +  GL +  ++  A ++F 
Sbjct: 405 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 464

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           E++   V+ DT TY   I    K+    EA+++F  + ++    ++++ N LID L
Sbjct: 465 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 520



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 190/390 (48%), Gaps = 8/390 (2%)

Query: 89   EALCIF-DYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            EAL I  DY L+        S  +++ G L K    +  +   + + S+G+  D +    
Sbjct: 667  EALHIIKDYFLQPGSKTDRSSCHSLMEGIL-KKAGIEKSIEFAEIIASSGITLDDFFLCP 725

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI   CK  +      ++ +      +     + SLI GL  E+ I  A  LF + +   
Sbjct: 726  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C PD FTYN L++ + ++      L + EEM     E         VTYNTII GL K  
Sbjct: 786  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE------STYVTYNTIISGLVKSR 839

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +++A +L+  +  +  +P   TY  ++ G   A    +A+ LF EM++ G + +   ++
Sbjct: 840  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 899

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++++     G  +K   L + M+ +G+NP+  +Y  +ID  C   +++     F  +   
Sbjct: 900  ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 959

Query: 388  GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            G   D+++YN LI+   K+K +EEA+SL++EM  KGI P + TYN+L L L +  +   A
Sbjct: 960  GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1019

Query: 448  LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             K+++E+       + +TYN  I G   SG
Sbjct: 1020 GKMYEELLTKGWKPNVFTYNALIRGYSVSG 1049



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 159/325 (48%), Gaps = 6/325 (1%)

Query: 110  FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
            +N L   L      D    LF  +   G  PD +T+++L++   K  R+     V   + 
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817

Query: 170  RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            R  +    VT+ ++I GL    R+ +A  L+         P   TY  L++GL + G   
Sbjct: 818  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877

Query: 230  VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
             A NLF EM     E+G  CK N   YN +++G    G  +K   LF  M D+ INPD+ 
Sbjct: 878  DAENLFNEML----EYG--CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIK 931

Query: 290  TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            +YT +I   C A   N+    F ++++ G++PD++T+++++D L K+ ++++A  L   M
Sbjct: 932  SYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 991

Query: 350  IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              +G+ PN YTYN+LI       K   A K++  + + G   +V +YN LI  Y  +   
Sbjct: 992  QKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGST 1051

Query: 410  EEALSLYSEMLSKGIKPTVVTYNTL 434
            + A + Y  M+  G  P   TY  L
Sbjct: 1052 DSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 211/462 (45%), Gaps = 39/462 (8%)

Query: 77  SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           +G+GD       EA  IF Y L+     P   ++N L   L +      V+ L + +  +
Sbjct: 523 AGRGD-------EAWRIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 574

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
              P++ T++ +++C CK G V+    +L  +      P+  ++ ++I GL  E R  EA
Sbjct: 575 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 634

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN--------------------LFE 236
            ++F + +     PD  T  T++    + G    AL+                    L E
Sbjct: 635 FSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 693

Query: 237 EMANGNG-----EFGVVCKPNTVTYN-----TIIDGLCKEGFVDKAKELFLKMKDENINP 286
            +    G     EF  +   + +T +      +I  LCK+    +A EL  K K   ++ 
Sbjct: 694 GILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 753

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
               Y S+I G    N  + A+ LF EM + G  PD  T+++++D + K+ ++++  ++ 
Sbjct: 754 KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 813

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E M  +G      TYNT+I G   + +++ A  L+ ++ S G      +Y  L++   K 
Sbjct: 814 EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 873

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +E+A +L++EML  G K     YN L  G       E+   LF +M    +  D  +Y
Sbjct: 874 GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 933

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              ID LCK+G + + L  FR + +   E ++++YN LIDGL
Sbjct: 934 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 975



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 11/415 (2%)

Query: 99  RMHP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM-- 155
           R+ P +PPP          +   +  D      +R  SA   P +   +   N   ++  
Sbjct: 42  RVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMR 101

Query: 156 --GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF 213
             GRV     V   + R     N  TF ++  GL  E  +  A       +      + +
Sbjct: 102 GHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAY 161

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
           TYN L+  L ++G    AL ++  M       GVV  P+  TY+ ++    K   V+   
Sbjct: 162 TYNGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVL 215

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            L  +M+   + P+V +YT  IR    A  ++EA R+  +M ++G +PDV+T +V++  L
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           C  G++  A  +   M      P+  TY TL+D +          +++ +M+++G   +V
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           V+Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           M  +    + YT+  FI+   KSG  ++A++ +  ++      ++V+ N ++ GL
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 450



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 157/324 (48%), Gaps = 9/324 (2%)

Query: 78   GQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
            G  D NLI   E L  F  M  +   P   + +N+L   + K+   + +L + + ++  G
Sbjct: 764  GLVDENLIDIAEGL--FAEMKELGCGPDEFT-YNLLLDAMGKSMRIEEMLKVQEEMHRKG 820

Query: 138  LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
                  T++ +I+   K  R+     +   ++   F+P   T+  L+ GL    RI +A 
Sbjct: 821  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 880

Query: 198  ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
             LF +   + C+ +   YN L+NG    G+T    +LF++M +          P+  +Y 
Sbjct: 881  NLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG------INPDIKSYT 934

Query: 258  TIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
             IID LCK G ++     F ++ +  + PD++TY  +I G   +    EA  LF EM  +
Sbjct: 935  IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 994

Query: 318  GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
            G+ P++ T++ ++  L K GK  +A ++ E ++ +G  PN +TYN LI GY ++   D A
Sbjct: 995  GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1054

Query: 378  RKLFVSMESNGCMHDVVSYNTLIN 401
               +  M   GC+ +  +Y  L N
Sbjct: 1055 YAAYGRMIVGGCLPNSSTYMQLPN 1078



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 41/260 (15%)

Query: 109  SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS--------- 159
            ++N +   L K++  +  + L+  L S G  P   T+  L++   K GR+          
Sbjct: 827  TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886

Query: 160  ----------------HGFVVLGRILRSC----------FTPNAVTFTSLIKGLCAESRI 193
                            +G  + G   + C            P+  ++T +I  LC   ++
Sbjct: 887  LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 946

Query: 194  MEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
             +    F +      EPD+ TYN LI+GL ++     A++LF EM       G+V  PN 
Sbjct: 947  NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK----GIV--PNL 1000

Query: 254  VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
             TYN++I  L K G   +A +++ ++  +   P+V TY ++IRG+  +   + A   +  
Sbjct: 1001 YTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGR 1060

Query: 314  MMDQGVQPDVVTFSVIMDEL 333
            M+  G  P+  T+  + ++L
Sbjct: 1061 MIVGGCLPNSSTYMQLPNQL 1080



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            N+ L  F  +L M   P  ++ +N+L   L K+K  +  +SLF  +   G+ P++YT++ 
Sbjct: 947  NDGLTYFRQLLEMGLEPDLIT-YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1005

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI    K G+ +    +   +L   + PN  T+ +LI+G         A A + +  V  
Sbjct: 1006 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1065

Query: 208  CEPDVFTYNTLINGL 222
            C P+  TY  L N L
Sbjct: 1066 CLPNSSTYMQLPNQL 1080


>gi|242069951|ref|XP_002450252.1| hypothetical protein SORBIDRAFT_05g002606 [Sorghum bicolor]
 gi|241936095|gb|EES09240.1| hypothetical protein SORBIDRAFT_05g002606 [Sorghum bicolor]
          Length = 406

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 192/387 (49%), Gaps = 53/387 (13%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCL--------AKNKHYDTVLSLFKRLN---SA 136
           ++AL +FD ML  H SP  V++FN LF  L        +     + V+SLF R+    S 
Sbjct: 51  DDALKLFDEMLP-HASPASVTAFNQLFTVLFCASSRRSSSTSESELVVSLFNRMVRDCSN 109

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
            + P++YT+SILI CFC MG + HGF   G IL++ +  N +  T LIKGLC   R+ EA
Sbjct: 110 KVAPNLYTYSILIGCFCCMGFLEHGFAAFGLILKTGWRVNDIVITHLIKGLCDAKRVDEA 169

Query: 197 A----------ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 246
                       +    +  +C  DV +YNT+I G    G    A +LF EM        
Sbjct: 170 MNRAEEALELLQMMADCQGRSCPRDVVSYNTVIKGFFNEGQVDKAYSLFLEMG------- 222

Query: 247 VVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNE 306
               PN VTY TIIDGLCK   VDKA         + + PD  TY  +I G         
Sbjct: 223 --VSPNVVTYTTIIDGLCKAQSVDKA---------DGVKPDHDTYNCLIHG--------- 262

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
               ++    +G++PDV  +S+++      G + +    L LM+  G++PN   +NT+I 
Sbjct: 263 ----YLSTRQKGIKPDVTIYSIMLHGYGTKGALSEMHDRLNLMVANGISPNHRIFNTMIY 318

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            Y     ID A  +F+ M+  G   D VSY  LI+  CK   V++A+  + +M+++G+ P
Sbjct: 319 AYAKEAMIDEAMHIFIKMKQQGLSPDAVSYAELIDALCKLGRVDDAVLQFKQMINEGVTP 378

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDE 453
             V +N+L  GL  + + E+    F +
Sbjct: 379 DNVVFNSLVYGLCTVDKWEKVENYFSK 405



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 49/313 (15%)

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP----NTVTYNTIIDGLCK 265
           P+++TY+ LI   C  G           + +G   FG++ K     N +    +I GLC 
Sbjct: 113 PNLYTYSILIGCFCCMGF----------LEHGFAAFGLILKTGWRVNDIVITHLIKGLCD 162

Query: 266 EGFVDKAK-------ELFLKMKD---ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
              VD+A        EL   M D    +   DVV+Y +VI+GF      ++A  LF+EM 
Sbjct: 163 AKRVDEAMNRAEEALELLQMMADCQGRSCPRDVVSYNTVIKGFFNEGQVDKAYSLFLEM- 221

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             GV P+VVT++ I+D LCK   +DKA          GV P+  TYN LI GY       
Sbjct: 222 --GVSPNVVTYTTIIDGLCKAQSVDKAD---------GVKPDHDTYNCLIHGY------- 263

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
                 +S    G   DV  Y+ +++ Y     + E     + M++ GI P    +NT+ 
Sbjct: 264 ------LSTRQKGIKPDVTIYSIMLHGYGTKGALSEMHDRLNLMVANGISPNHRIFNTMI 317

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
               +   ++ A+ +F +M++  ++ D  +Y   ID LCK G V +A+  F+ + +    
Sbjct: 318 YAYAKEAMIDEAMHIFIKMKQQGLSPDAVSYAELIDALCKLGRVDDAVLQFKQMINEGVT 377

Query: 496 LNIVSYNCLIDGL 508
            + V +N L+ GL
Sbjct: 378 PDNVVFNSLVYGL 390


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 224/454 (49%), Gaps = 42/454 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+ +++ MLR+      V+  ++L G L +   ++  L ++  +   G+ PD  ++  L
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKG-LCRVGAFEDALHVWHLMLKRGVTPDEVSYCTL 470

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++   KMG       +   IL   +  +   F ++I G C   +++EA   F + +    
Sbjct: 471 LDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGF 530

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           EPD  TY TLI+G C+ G+   A  + E+M            P+   YN++I GL K   
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE------AILPSIELYNSLIGGLFKSKK 584

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +  +L  +M  + ++P+VVTY ++I G+C     ++A   + +M+++G  P+V+  S 
Sbjct: 585 TREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSK 644

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVN--------------------------------- 355
           I+  L + G++D+A+ LL+ M+   V                                  
Sbjct: 645 IVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSF 704

Query: 356 --PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
             PN+  YN  I G C + K+D A+K+F S+   G   D  +Y TLI+ Y    +V +A 
Sbjct: 705 SLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAF 764

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
           SL  EML +G+ P ++TYN L  GL +   ++RA KLFD++    +A +  +YN  IDG 
Sbjct: 765 SLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGY 824

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK+G   EAL+L   +       ++++Y+ LI G
Sbjct: 825 CKNGNTREALDLRNKMLKEGISPSLITYSALIYG 858



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 221/475 (46%), Gaps = 66/475 (13%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M ++    P + S N L   L +       + ++  +N  G+ PD++T SI++
Sbjct: 167 ALHVFDNMGKL-GCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMV 225

Query: 150 NCFCKMGRVS-------------------------HGFVVLGRILRS----------CFT 174
           N +CK G V+                          G V +G + R+             
Sbjct: 226 NAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGIL 285

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            N VT T LIKG C + ++ EA  +  +  R      D + Y  LI+G CR      A+ 
Sbjct: 286 RNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVR 345

Query: 234 LFEEMAN------------------GNGEFGVV-----------CKPNTVTYNTIIDGLC 264
           L +EM N                   NG+                +P + +Y+T++DG C
Sbjct: 346 LRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFC 405

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
           +EG V KA  ++ +M    I  +VVT+ S+++G C    + +A  ++  M+ +GV PD V
Sbjct: 406 REGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEV 465

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           ++  ++D L K G+  +A  L   ++ RG   +TY +NT+I+G+C  +K+  A + F  M
Sbjct: 466 SYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRM 525

Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
           +  G   D V+Y TLI+ YCK  +VEEA  +  +M  + I P++  YN+L  GLF+  + 
Sbjct: 526 KELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKT 585

Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
              + L  EM    ++ +  TY   I G C  G + +A   +  + +  +  N++
Sbjct: 586 REVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVI 640



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 210/454 (46%), Gaps = 42/454 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL ++  ML+   +P  VS +  L   L K   +   L+L+  + + G     Y  + +
Sbjct: 447 DALHVWHLMLKRGVTPDEVS-YCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTM 505

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           IN FCKM ++        R+    F P+ VT+ +LI G C    + EA  +  K    A 
Sbjct: 506 INGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P +  YN+LI GL ++  T   ++L  EM            PN VTY T+I G C EG 
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG------LSPNVVTYGTLIAGWCDEGR 619

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM------MDQGV--- 319
           +DKA   +  M ++   P+V+  + ++         +EA  L  +M      +D G    
Sbjct: 620 LDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDR 679

Query: 320 --------------------------QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
                                      P+ V +++ +  LCK+GK+D A ++   ++ RG
Sbjct: 680 LHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRG 739

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
            +P+ +TY TLI GY     ++ A  L   M   G   ++++YN LIN  CK+ +++ A 
Sbjct: 740 FSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQ 799

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+ ++  KG+ P V++YN L  G  +      AL L ++M +  ++    TY+  I G 
Sbjct: 800 KLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGF 859

Query: 474 CKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           CK G + +A  L   +R+   + NI  +  L++G
Sbjct: 860 CKQGDMGKATNLLDEMRELFADQNIAKFVKLVEG 893



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 186/406 (45%), Gaps = 41/406 (10%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           +FN +     K +        F R+   G  PD  T+  LI+ +CK+G V   F V  ++
Sbjct: 501 AFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKM 560

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
            +    P+   + SLI GL    +  E   L ++  +    P+V TY TLI G C  G  
Sbjct: 561 EKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRL 620

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM--------- 279
             A   + +M     E G    PN +  + I+  L + G +D+A  L  KM         
Sbjct: 621 DKAFTAYFDMI----EKGFA--PNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDH 674

Query: 280 ---------KDENIN-----------------PDVVTYTSVIRGFCYANDWNEAKRLFIE 313
                     D N++                 P+ V Y   I G C +   ++AK++F  
Sbjct: 675 GYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSS 734

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           ++ +G  PD  T+  ++      G ++ A  L + M+ RG+ PN  TYN LI+G C +  
Sbjct: 735 LLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGN 794

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +D A+KLF  +   G   +V+SYN LI+ YCKN +  EAL L ++ML +GI P+++TY+ 
Sbjct: 795 LDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSA 854

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
           L  G  +   + +A  L DEMR      +   +   ++G  K G V
Sbjct: 855 LIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEV 900



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 222/432 (51%), Gaps = 16/432 (3%)

Query: 84  LITPNE----ALCIFDYMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
           L+TP++    +L +++ ++R+       P V  F+++     +       L +F  +   
Sbjct: 120 LVTPSKNNYSSLVVWNELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKL 177

Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
           G  P + + + L++   + G  S+  +V   I R    P+  T + ++   C +  +  A
Sbjct: 178 GCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVA 237

Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
                +      E +V TYN+LI+G    G    A  + + M    GE G++   N VT 
Sbjct: 238 VDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLM----GERGIL--RNKVTL 291

Query: 257 NTIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
             +I G C++  +++A+++  +M + E +  D   Y  +I G+C     ++A RL  EM+
Sbjct: 292 TLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEML 351

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G++ ++   + +++  CKNG++ +A RLL  M+   + P +Y+Y+TL+DG+C    + 
Sbjct: 352 NVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVT 411

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  ++  M   G   +VV++N+L+   C+    E+AL ++  ML +G+ P  V+Y TL 
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
             LF++ +  RAL L++++        TY +N  I+G CK   ++EA E F  +++  +E
Sbjct: 472 DLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFE 531

Query: 496 LNIVSYNCLIDG 507
            + V+Y  LIDG
Sbjct: 532 PDGVTYRTLIDG 543



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 195/438 (44%), Gaps = 41/438 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S++ L     +       +S++  +   G+  ++ TH+ L+   C++G       V
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +L+   TP+ V++ +L+  L        A AL+            + +NT+ING C+
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
               I A    EE  N   E G   +P+ VTY T+IDG CK G V++A ++  KM+ E I
Sbjct: 512 MEKMIEA----EETFNRMKELGF--EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +  Y S+I G   +    E   L  EM  +G+ P+VVT+  ++   C  G++DKA  
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-------------------- 384
               MI +G  PN    + ++       +ID A  L   M                    
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 385 -------------ESNG--CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                        ES+    + + V YN  I   CK+  V++A  ++S +L +G  P   
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY TL  G      V  A  L DEM +  +A +  TYN  I+GLCKSG +  A +LF  +
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 490 RDSKYELNIVSYNCLIDG 507
                  N++SYN LIDG
Sbjct: 806 HLKGLAPNVISYNILIDG 823



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 8/351 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L G L K+K    V+ L   +   GL P++ T+  LI  +C  GR+   F  
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              ++   F PN +  + ++  L    RI EA  L  K        DVF  +   + L +
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK----MVNLDVFLDHGYFDRLHK 682

Query: 225 TGH-TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
                + +  + + +   +  F +   PN+V YN  I GLCK G VD AK++F  +    
Sbjct: 683 ADDGNLDSQKIADTLDESSKSFSL---PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRG 739

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
            +PD  TY ++I G+  A + N+A  L  EM+ +G+ P+++T++ +++ LCK+G +D+A 
Sbjct: 740 FSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQ 799

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +L + +  +G+ PN  +YN LIDGYC       A  L   M   G    +++Y+ LI  +
Sbjct: 800 KLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGF 859

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           CK  D+ +A +L  EM        +  +  L  G  +  +V++  KL + M
Sbjct: 860 CKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 197/419 (47%), Gaps = 41/419 (9%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
           D  + L   + + GL  +++  + LIN +CK G+VS    +L R++     P + ++++L
Sbjct: 341 DDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTL 400

Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
           + G C E  + +A +++ +      + +V T+N+L+ GLCR G    AL+++  M     
Sbjct: 401 MDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLML---- 456

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           + GV   P+ V+Y T++D L K G   +A  L+  +           + ++I GFC    
Sbjct: 457 KRGVT--PDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEK 514

Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
             EA+  F  M + G +PD VT+  ++D  CK G +++A ++ E M    + P+   YN+
Sbjct: 515 MIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNS 574

Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
           LI G   + K      L   M   G   +VV+Y TLI  +C    +++A + Y +M+ KG
Sbjct: 575 LIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634

Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEM------------RRNHVAAD--------- 462
             P V+  + +   L+ + +++ A  L  +M             R H A D         
Sbjct: 635 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIA 694

Query: 463 --------------TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                         +  YN  I GLCKSG V +A ++F ++    +  +  +Y  LI G
Sbjct: 695 DTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHG 753



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 157/305 (51%), Gaps = 11/305 (3%)

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
           F   P VF  + ++   C  G    AL++F+ M    G+ G  C P+  + N ++  L +
Sbjct: 144 FKFSPTVF--DMILKIYCEKGMIKNALHVFDNM----GKLG--CVPSLRSCNRLLSSLVR 195

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVV 324
           +G    A  ++  +    I PDV T + ++  +C  + W      F++ MD  G + +VV
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYC-KDGWVNVAVDFVKEMDYLGFELNVV 254

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
           T++ ++D     G M++A  +L+LM  RG+  N  T   LI GYC   K++ A K+   M
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314

Query: 385 E-SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           E S G + D  +Y  LI+ YC+   +++A+ L  EML+ G++  +   N L  G  +  Q
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQ 374

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           V  A +L   M    +  ++Y+Y+  +DG C+ G V +A+ ++  +     + N+V++N 
Sbjct: 375 VSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNS 434

Query: 504 LIDGL 508
           L+ GL
Sbjct: 435 LLKGL 439


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 208/446 (46%), Gaps = 37/446 (8%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           ++D M R     P V ++N+L   L +N   D    +   ++  G  PD  +H  +++  
Sbjct: 91  VYDNM-RKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGM 149

Query: 153 CKMGRVSHG------------------------------FVVLGRILRSCFTPNAVTFTS 182
           CK+GRV                                 F V+  +++    PN VT+T+
Sbjct: 150 CKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 209

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 242
           ++   C    +  A A+  +     C P+V T+  L+ G    G    AL+++  M +  
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269

Query: 243 GEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
                   P+T++YN +I GLC  G +  A + F  MK   + P+  TY++++ GF  A 
Sbjct: 270 W------APSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG 323

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           D + A  ++ EM   G +P+VV ++ ++D LCK    D+A  L++ M+     PNT T+N
Sbjct: 324 DLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFN 383

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
           TLI   C   ++  A  +F  M  NGC  +  +YN L++   +  + ++A ++  EML+ 
Sbjct: 384 TLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN 443

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
           G + ++VTYNT+   L ++   + A+ L   M    +  D +T+N  I   CK G V  A
Sbjct: 444 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 503

Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
             L   +       N+V+Y  LI  L
Sbjct: 504 ACLLGQMNAVNCPRNVVAYTILISEL 529



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 208/406 (51%), Gaps = 15/406 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +N L   L +      V+ ++  +  AG+ P++YT+++LI   C+  RV     +
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE--PDVFTYNTLINGL 222
           L  + R    P+ V+  +++ G+C   R+ EA       R F  E  P   +YN +++ L
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-------RGFLAETVPVQASYNAVVHAL 179

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C         ++  EM     + G+  +PN VTY TI+D  CK   +  A  +  +M   
Sbjct: 180 CGEFRMWEVFSVVNEMV----QRGL--QPNVVTYTTIVDAFCKARELRMACAILARMVSM 233

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
              P+V+T+T++++GF      ++A  ++  M+D+G  P  ++++V++  LC  G +  A
Sbjct: 234 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 293

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
                 M    + PN  TY+TL+DG+     +D A  ++  M+S+GC  +VV Y  +I+ 
Sbjct: 294 LDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDV 353

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK    ++A SL  +ML     P  VT+NTL   L +  +V RAL +F  MRRN    +
Sbjct: 354 LCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 413

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             TYN  + GL + G   +A  +   + ++ +EL++V+YN +I+ L
Sbjct: 414 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCL 459



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 6/379 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +S+N +   L        V S+   +   GL P++ T++ +++ FCK   +     +
Sbjct: 167 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 226

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L R++    TPN +TFT+L+KG   + ++ +A +++         P   +YN LI GLC 
Sbjct: 227 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 286

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL+ F  M            PN  TY+T++DG    G +D A  ++ +MK    
Sbjct: 287 IGDLKGALDFFNSMKRN------ALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 340

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+VV YT++I   C    +++A+ L  +M+     P+ VTF+ ++  LC  G++ +A  
Sbjct: 341 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALN 400

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +   M   G +PN  TYN L+ G         A  + + M +NG    +V+YNT+IN  C
Sbjct: 401 VFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLC 460

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +    + A+ L   M+ +GI+P   T+N +     +  +V  A  L  +M   +   +  
Sbjct: 461 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 520

Query: 465 TYNNFIDGLCKSGFVLEAL 483
            Y   I  LC  G +  A+
Sbjct: 521 AYTILISELCNQGKLSNAM 539



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 36/368 (9%)

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
            C  P    +  L+  L  E+ +     ++   R    +P+V+TYN LI  LC+      
Sbjct: 63  GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 122

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK----------------- 273
           A  + +EM+         C P+ V++ TI+ G+CK G V++A+                 
Sbjct: 123 ARKMLDEMSRKG------CHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVV 176

Query: 274 ----------ELFL---KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
                     E+F    +M    + P+VVTYT+++  FC A +   A  +   M+  G  
Sbjct: 177 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 236

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P+V+TF+ ++    ++GK+  A  +   M+  G  P+T +YN LI G C    +  A   
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
           F SM+ N  + +  +Y+TL++ +    D++ A+ +++EM S G KP VV Y  +   L +
Sbjct: 297 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356

Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
               ++A  L D+M  ++   +T T+N  I  LC  G V  AL +F  +R +    N  +
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416

Query: 501 YNCLIDGL 508
           YN L+ GL
Sbjct: 417 YNELLHGL 424



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 171/350 (48%), Gaps = 7/350 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A  I   M+ M  +P  ++   ++ G     K +D  LS++  +   G  P   ++++LI
Sbjct: 223 ACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA-LSMWHWMVDEGWAPSTISYNVLI 281

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C +G +         + R+   PNA T+++L+ G      +  A  ++ + +   C+
Sbjct: 282 RGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK 341

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P+V  Y  +I+ LC+      A +L ++M   N      C PNTVT+NT+I  LC  G V
Sbjct: 342 PNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN------CPPNTVTFNTLIGRLCDCGRV 395

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            +A  +F  M+    +P+  TY  ++ G     +  +A  + IEM++ G +  +VT++ +
Sbjct: 396 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 455

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++ LC+      A  LL  M+ +G+ P+ +T+N +I  YC   K+  A  L   M +  C
Sbjct: 456 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNC 515

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
             +VV+Y  LI+  C    +  A+    +ML +GI P   T+N L   +F
Sbjct: 516 PRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 33/293 (11%)

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI-NPDVVTYTSVIRGFCYANDW 304
           GV C  + +     I    + G  D+A + F +  D    +P V  Y  ++      N  
Sbjct: 28  GVACTEDALV--AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMV 85

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
                ++  M   GV P+V T+++++  LC+N ++D A ++L+ M  +G +P+  ++ T+
Sbjct: 86  GAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTI 145

Query: 365 IDGYCLTDKIDHARKLFV------------------------------SMESNGCMHDVV 394
           + G C   +++ AR                                   M   G   +VV
Sbjct: 146 VSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVV 205

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y T+++ +CK +++  A ++ + M+S G  P V+T+  L  G FE  +V  AL ++  M
Sbjct: 206 TYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWM 265

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
                A  T +YN  I GLC  G +  AL+ F +++ +    N  +Y+ L+DG
Sbjct: 266 VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 318



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 30/276 (10%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL  F+ M R +   P  ++++ L    +     D  + ++  + S+G  P++  ++ +I
Sbjct: 293 ALDFFNSMKR-NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 351

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +  CK         ++ ++L     PN VTF +LI  LC   R+  A  +F   R   C 
Sbjct: 352 DVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 411

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC-------------------- 249
           P+  TYN L++GL R G+   A  +  EM N   E  +V                     
Sbjct: 412 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLL 471

Query: 250 ---------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
                    +P+  T+N II   CKEG V  A  L  +M   N   +VV YT +I   C 
Sbjct: 472 LGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCN 531

Query: 301 ANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
               + A    ++M+ +G+ P+  T++V++  +  N
Sbjct: 532 QGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N +  CL +       + L  R+   G+ PD +T + +I+ +CK G+VS    +LG++
Sbjct: 451 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 510

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
                  N V +T LI  LC + ++  A     K       P+  T+N L+  +     T
Sbjct: 511 NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGT 570

Query: 229 IVALNLFE 236
           I  ++LF+
Sbjct: 571 IGPIHLFK 578


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 8/384 (2%)

Query: 95  DYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           D ML M      P V ++N L     K   ++ V  + + +    +  +  T+++LI  +
Sbjct: 236 DLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWY 295

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
              G+++    V  ++L      +   FTS+I   C    +  A ALF +        + 
Sbjct: 296 GSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANA 355

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
            TY  LI+G C +G    A  L  EM +   +       N V +NT+I+G CK+G +D+A
Sbjct: 356 HTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDM------NLVIFNTLINGYCKKGMIDEA 409

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             +   M+ +    D+ TY ++  G C  N   EAKR    M+++GV P+ V+F++++D 
Sbjct: 410 LRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDI 469

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            CK G + +A R+ + M  +G  PN  TYNTLIDGY    K+  A +L   MES G   D
Sbjct: 470 HCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSD 529

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           + +Y TL++  C    VEEAL+L +E+  KG+  ++VTY  +  GL +  + E A +L+D
Sbjct: 530 IYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYD 589

Query: 453 EMRRNHVAADTYTYNNFIDGLCKS 476
           EM    +  D   Y + +  L K+
Sbjct: 590 EMMAAGLTPDDRVYTSLVANLHKT 613



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 24/469 (5%)

Query: 52  LKESLRLTVKDRASL-------KKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSP 104
           + ++LR +V D  SL        KF+++ C    +  ++     E   +FDYM+    + 
Sbjct: 119 MDKNLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVH---NG 175

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSL--FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
             +   + +   LA  +    V+SL  FK++    +   +Y+ +I+I+  CK GRV    
Sbjct: 176 LKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAK 235

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVF---TYNTLI 219
            ++  +      PN VT+ +L+    A  +IM+   +    R+   +  V+   TY  LI
Sbjct: 236 DLMLEMTGKGIKPNVVTYNTLVN---AYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLI 292

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
                +G    A  +FE+M     E GV  + +   + +II   CK G + +A  LF ++
Sbjct: 293 EWYGSSGKIAEAEKVFEKML----ERGV--EADIHVFTSIISWQCKLGNMKRAFALFDEL 346

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            +  +  +  TY ++I G C +   + A+ L  EM  QG+  ++V F+ +++  CK G +
Sbjct: 347 NERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMI 406

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           D+A R+ ++M  +G   + +TYNT+  G C  ++ + A++   +M   G   + VS+  +
Sbjct: 407 DEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIM 466

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
           I+ +CK  ++ EA  ++ +M  KG KP VVTYNTL  G  +  +++ A +L DEM    +
Sbjct: 467 IDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGM 526

Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +D YTY   + G C  G V EAL L   +      ++IV+Y  +I GL
Sbjct: 527 TSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGL 575



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S  I+   L K    +    L   +   G+ P++ T++ L+N + K+        +L 
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR 274

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +       NA T+T LI+   +  +I EA  +F K      E D+  + ++I+  C+ G
Sbjct: 275 LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLG 334

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
           +   A  LF+E+     E G+V   N  TY  +I G C  G +D A+ L  +M+ + ++ 
Sbjct: 335 NMKRAFALFDEL----NERGLV--ANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDM 388

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           ++V + ++I G+C     +EA R+   M  +G + D+ T++ I   LCK  + ++A R L
Sbjct: 389 NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWL 448

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+ +GV+PN  ++  +ID +C    +  A ++F  M+  G   +VV+YNTLI+ Y K 
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKK 508

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             ++EA  L  EM S G+   + TY TL  G     +VE AL L +E+ R  +A    TY
Sbjct: 509 GKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTY 568

Query: 467 NNFIDGLCKSGFVLEALELF 486
              I GL K G   EA  L+
Sbjct: 569 TAIISGLSKEGRSEEAFRLY 588


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 197/396 (49%), Gaps = 6/396 (1%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N   G L KN  +D V   +    + G     +T+S  I+  C+  R+     +L  + 
Sbjct: 196 YNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMD 255

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           +   +P+       I  LC ++R+ +A  +  K R     PDV TY T+++GLC      
Sbjct: 256 KLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFA 315

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A+ L+EEM   +       KP+  +   +I GLCK   VD+A EL  +M   +I   V 
Sbjct: 316 EAIGLWEEMVKRD------LKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVC 369

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
            Y ++I GF  A   ++A ++   M   G +PD+VT++++++  C  G M+KA +L+  M
Sbjct: 370 IYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKM 429

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
              GVNP+ Y+YN L+ G C T ++D A          G   D VS N LI+ +CK K V
Sbjct: 430 ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKV 489

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           + AL L+ EM  KG++   VTY TL  GLF +     A +LF++M    +  +   YN  
Sbjct: 490 KSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIM 549

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  LCK G    A  +F  +   +   + V++N LI
Sbjct: 550 LHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI 585



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 187/382 (48%), Gaps = 6/382 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + NI    L K       L + +++ + G  PD+ T+  +++  C   + +    +
Sbjct: 261 PDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGL 320

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              +++    P+  +  +LI GLC  +++ EA  L ++      E  V  YN LI+G  R
Sbjct: 321 WEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWR 380

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  +   M   NG     C+P+ VTYN +++  C  G ++KA++L  KM+   +
Sbjct: 381 AGSIDKAYKIISFMRT-NG-----CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGV 434

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           NPD  +Y  +++G C  +  ++A     + M+ G   D V+ ++++D  CK  K+  A  
Sbjct: 435 NPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALE 494

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M ++G+  +  TY TLI+G       + A +LF  M +     +V  YN +++  C
Sbjct: 495 LFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLC 554

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    + A +++S M+ K + P  VT+NTL   L +  +   AL LF +MR   V  DT 
Sbjct: 555 KVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTL 614

Query: 465 TYNNFIDGLCKSGFVLEALELF 486
           T+   I GL   G    A E++
Sbjct: 615 TFKYLISGLLDEGKSTLAYEVW 636



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 156/296 (52%), Gaps = 6/296 (2%)

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FTY+  I+ LC++      + L +E+     + G  C P+    N  I  LCK+  +  A
Sbjct: 229 FTYSRWISALCQSNR----IELVQELLVDMDKLG--CSPDIWACNIYIYYLCKQNRLPDA 282

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            ++  KM+ +  +PDVVTY +V+ G C    + EA  L+ EM+ + ++PDV +   ++  
Sbjct: 283 LQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFG 342

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCKN K+D+A  L   M+   +  +   YN LI G+     ID A K+   M +NGC  D
Sbjct: 343 LCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPD 402

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           +V+YN L+N YC    +E+A  L  +M + G+ P   +YN L  GL + HQ+++A     
Sbjct: 403 IVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVS 462

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +        DT + N  ID  CK+  V  ALELF+ +     + + V+Y  LI+GL
Sbjct: 463 DHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGL 518



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 167/365 (45%), Gaps = 6/365 (1%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R   + P V ++  +   L  NK +   + L++ +    L PD+++   LI   CK  +
Sbjct: 289 MRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNK 348

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           V   F +  R+L      +   + +LI G      I +A  + +  R   CEPD+ TYN 
Sbjct: 349 VDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNI 408

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           L+N  C  G    A  L  +M       GV   P+  +YN ++ GLCK   +DKA     
Sbjct: 409 LLNHYCTIGMMEKAEKLIRKMETS----GV--NPDRYSYNQLLKGLCKTHQLDKAFAFVS 462

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
              +     D V+   +I  FC       A  LF EM  +G+Q D VT+  +++ L   G
Sbjct: 463 DHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVG 522

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
             + A  L E M+   ++PN   YN ++   C       A+ +F  M       D V++N
Sbjct: 523 YYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFN 582

Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
           TLI W  K     EAL+L+ +M ++G++P  +T+  L  GL +  +   A ++++ M  N
Sbjct: 583 TLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMEN 642

Query: 458 HVAAD 462
            +  D
Sbjct: 643 GIILD 647



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 16/345 (4%)

Query: 166 GRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRT 225
           GR L   F P  +  + +I  L A  R M +  L    R+   E D    N ++ GL  +
Sbjct: 48  GR-LSELFRPVRMDISGII--LQALERSMCSEPLVELERL-DVELDPIVVNLVVRGLSDS 103

Query: 226 GHTIVALNLFEEMANG--NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
             T V    + E   G  + +F +           ++  L  +G      E   ++K + 
Sbjct: 104 -ETAVRFYWWAESRPGFDHSQFAIA---------YLVSLLFMDGNFALLSEFLGRVKSQG 153

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           +      Y  ++ G+  A  ++     F EM+  G +   V ++  +  L KN   D   
Sbjct: 154 VALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVE 213

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           +  ++ + +G     +TY+  I   C +++I+  ++L V M+  GC  D+ + N  I + 
Sbjct: 214 KYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYL 273

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   + +AL +  +M +KG  P VVTY T+  GL +  +   A+ L++EM +  +  D 
Sbjct: 274 CKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDV 333

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           ++    I GLCK+  V EA EL   +     EL++  YN LI G 
Sbjct: 334 FSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGF 378


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 199/401 (49%), Gaps = 8/401 (1%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +AL + D ML      P V ++NIL     K + Y   + L   +   G  P   T++++
Sbjct: 170 DALVLLDNML-YRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVI 228

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  C+ G V +   +L  +     TPN V + +++KGL    R  +   L  +     C
Sbjct: 229 MDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENC 288

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P   T + +I+ LC+ G    A+ L E+M+  +      C  N VTYN ++ GLC++G 
Sbjct: 289 PPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD------CTANIVTYNAVVSGLCEQGH 342

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           VD A  L   M+ +   P++ TY  +++G C A  W +A+ L  +M      PD++TF+ 
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNT 402

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           I+  LC+ G   +A  + + M  +G  PN+ TY+++I+G   T K++ + +L   M S G
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
             +  ++Y+ L     +   + EA+ +  ++   GI P  V YNT+ LGL    + ++A+
Sbjct: 463 -FNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            +   M  +    D  TY+  I GL   G++ EA EL   +
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 189/396 (47%), Gaps = 15/396 (3%)

Query: 94  FDYMLRMHPS---PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
            D  LR+  S   PP V+  N L   L +         + +   SA       T+S L +
Sbjct: 72  LDAALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAA---TAVTYSALAD 128

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
            +C++GR+     V+  +      P+A  +  L+  LC   ++ +A  L        C P
Sbjct: 129 GYCRVGRLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAP 185

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           DV TYN L+   C+      A+ L + M          C P  VTYN I+DG+C+EG VD
Sbjct: 186 DVVTYNILLEAACKGRGYRQAMELIDLMRVEG------CTPTNVTYNVIMDGMCREGDVD 239

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            A+EL   +      P+ V Y +V++G   A  W + + L  EM  +   P   T SV++
Sbjct: 240 YARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVI 299

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             LC+ G   +A RLLE M       N  TYN ++ G C    +D A  L  +M+++GC 
Sbjct: 300 SSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCK 359

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            ++ +YN L+   C  +  E+A  L ++M      P ++T+NT+   L +     +A+++
Sbjct: 360 PNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEV 419

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           F +M       ++ TY++ I+GL K+G + ++LEL 
Sbjct: 420 FKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELL 455



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 28/359 (7%)

Query: 165 LGRILRSCFTPNAVTFTSLI--------KGLCAESR----IMEAAALFTKHRVFA---CE 209
           L +ILRS   PNA +F            + L  E R    ++    L    RV     C 
Sbjct: 27  LSQILRS-SNPNAPSFPKPNPDPPPPPPRRLHGEDRRLSSLVHRGELDAALRVVESSLCP 85

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           PDV   N L+  LCR G    A  + E   +             VTY+ + DG C+ G +
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVEACGSA---------ATAVTYSALADGYCRVGRL 136

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           D+A+ +   M    + P    Y  ++   C      +A  L   M+ +G  PDVVT++++
Sbjct: 137 DEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNIL 193

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           ++  CK     +A  L++LM   G  P   TYN ++DG C    +D+AR+L  S+ S GC
Sbjct: 194 LEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGC 253

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             + V+YNT++         E+   L +EM S+   P+  T + +   L +    +RA++
Sbjct: 254 TPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIR 313

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L ++M ++   A+  TYN  + GLC+ G V  AL L   ++    + NI +YN L+ GL
Sbjct: 314 LLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGL 372



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 7/248 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N +   L +  H D  L L   + + G  P+I+T++IL+   C   R      ++ 
Sbjct: 327 IVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMA 386

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           ++ ++   P+ +TF ++I  LC +   M+A  +F +     C P+  TY+++I GL +TG
Sbjct: 387 KMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTG 446

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               +L L  EM  G+  F        + Y+ + + L +E  + +A ++  K++D  I+P
Sbjct: 447 KMEQSLELLNEM--GSKGFN-----PEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISP 499

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             V Y +++ G C     ++A  +   M+  G  PD  T+S+++  L   G M +A  LL
Sbjct: 500 QAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELL 559

Query: 347 ELMIWRGV 354
             +  R V
Sbjct: 560 STLSSRDV 567


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 168/331 (50%), Gaps = 6/331 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           G +  GF  L  ++     P+ +  TSLI+G C   +  +A  +          PDV TY
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N LI+G+C TG  + A  L  +M          C P+ VT+N +I+ LC++G + +A ++
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRG------CSPSVVTFNILINFLCRKGLLGRAIDV 211

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             KM      P+ ++Y  ++ GFC       A     +M  +G  PD+VT++ ++  LCK
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           +GK+D A  LL  +  +G +P   TYNT+IDG     K D A KL   M + G   D+++
Sbjct: 272 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIIT 331

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y++L+    +   V+EA+  + ++   G+KP  +TYN + LGL +  + +RA+     M 
Sbjct: 332 YSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           +        +Y   I+GL   G   EALEL 
Sbjct: 392 QRGCKPTEASYTILIEGLAYEGLAKEALELL 422



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 203/428 (47%), Gaps = 18/428 (4%)

Query: 27  SFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQGDINLIT 86
           SF H  +  +  S           KLK S    V     L+   K      G G ++L +
Sbjct: 16  SFQHLHRENTRTSSAFAGVRVRVRKLKRSRIFAVSFNGKLQSLDKLPNGHLGNGHVSL-S 74

Query: 87  PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
           P  +L  F+           + S N L   L +N   +      + +   G  PDI   +
Sbjct: 75  PIHSLTNFE----------EIESNNNLSK-LVRNGELEEGFRFLESMVYRGDIPDIIPCT 123

Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
            LI  FCK+G+      ++  I  S   P+ +T+  LI G+C+  R M+A  L       
Sbjct: 124 SLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRR 183

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P V T+N LIN LCR G    A+++ E+M          C PN+++YN ++ G CKE
Sbjct: 184 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG------CTPNSLSYNPLLHGFCKE 237

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
             +++A E   KM      PD+VTY +++   C     + A  L  ++  +G  P ++T+
Sbjct: 238 KKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITY 297

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++D L K GK D+A++LL+ M  +G+ P+  TY++L+ G     K+D A K F  +E 
Sbjct: 298 NTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEV 357

Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
            G   + ++YN ++   CK +  + A+   + M+ +G KPT  +Y  L  GL      + 
Sbjct: 358 LGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKE 417

Query: 447 ALKLFDEM 454
           AL+L +E+
Sbjct: 418 ALELLNEL 425



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 152/258 (58%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRL 310
           P+ +   ++I G CK G   KA  +   ++D    PDV+TY  +I G C    W +A++L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176

Query: 311 FIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCL 370
             +M+ +G  P VVTF+++++ LC+ G + +A  +LE M   G  PN+ +YN L+ G+C 
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236

Query: 371 TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
             K++ A +    M S GC  D+V+YNTL+   CK+  V+ A+ L +++ SKG  P ++T
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296

Query: 431 YNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
           YNT+  GL ++ + ++A KL DEMR   +  D  TY++ + GL + G V EA++ F  + 
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLE 356

Query: 491 DSKYELNIVSYNCLIDGL 508
               + N ++YN ++ GL
Sbjct: 357 VLGVKPNAITYNAIMLGL 374



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 10/294 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N+L   +     +     L   +   G  P + T +ILIN  C+ G +     V
Sbjct: 152 PDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDV 211

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++ +   TPN++++  L+ G C E ++  A     K     C PD+ TYNTL+  LC+
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ L  ++++        C P  +TYNT+IDGL K G  D+A +L  +M+ + +
Sbjct: 272 DGKVDAAVELLNQLSSKG------CSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL 325

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD++TY+S++ G       +EA + F ++   GV+P+ +T++ IM  LCK  K D+A  
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
            L  M+ RG  P   +Y  LI+G         A +L   +    C+  VV  ++
Sbjct: 386 FLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL----CLRGVVKKSS 435



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 156/315 (49%), Gaps = 22/315 (6%)

Query: 200 FTKHRVFACE--PDVFTYNTLINGLCRTGHT----IVALNLFEEMANGNGEFGVVCKPNT 253
             + R+FA      + + + L NG    GH     I +L  FEE+ + N           
Sbjct: 41  LKRSRIFAVSFNGKLQSLDKLPNGHLGNGHVSLSPIHSLTNFEEIESNNN---------- 90

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
                 +  L + G +++       M      PD++  TS+IRGFC      +A R+   
Sbjct: 91  ------LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
           + D G  PDV+T++V++  +C  G+   A +LL  M+ RG +P+  T+N LI+  C    
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
           +  A  +   M  +GC  + +SYN L++ +CK K +E A+    +M S+G  P +VTYNT
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           L   L +  +V+ A++L +++     +    TYN  IDGL K G   +A +L   +R   
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 494 YELNIVSYNCLIDGL 508
            + +I++Y+ L+ GL
Sbjct: 325 LKPDIITYSSLVGGL 339



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 6/219 (2%)

Query: 101 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSH 160
           H   P   S+N L     K K  +  +    ++ S G +PDI T++ L+   CK G+V  
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
              +L ++     +P  +T+ ++I GL    +  +AA L  + R    +PD+ TY++L+ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
           GL R G    A+  F ++       GV  KPN +TYN I+ GLCK    D+A +    M 
Sbjct: 338 GLSREGKVDEAIKFFHDLE----VLGV--KPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
                P   +YT +I G  Y     EA  L  E+  +GV
Sbjct: 392 QRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 192/365 (52%), Gaps = 10/365 (2%)

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           Y+++ILI    +   V    V++  +++   + N   +T LIKGLC E RI +A  L  +
Sbjct: 250 YSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDE 309

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
             +    P V+TYN +I+G C++G    AL + + +   NG     C P+  TYN++I G
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDWTYNSLIYG 363

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           LC  G +D+A+EL          P V+T+T++I G+C A   ++A R+   M+    + D
Sbjct: 364 LCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
           +  + V+++ L K  ++ +A   L  M   G+ PN   Y ++IDGYC    +  A ++F 
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFK 482

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            ME  GC  +  +Y +LI    ++K + +A++L ++M   GI P V+ Y TL  G  + H
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH 542

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           + + A +LF+ M +N +  D   YN   D LCKSG    A E +  +      L  V+Y 
Sbjct: 543 EFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYT 599

Query: 503 CLIDG 507
            L+DG
Sbjct: 600 SLVDG 604



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 205/438 (46%), Gaps = 45/438 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +     K+      L +   +   G  PD +T++ LI   C  G++     +
Sbjct: 317 PSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEEL 375

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEA---------------------------- 196
           L   +   FTP  +TFT+LI G C   RI +A                            
Sbjct: 376 LNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIK 435

Query: 197 -----AALFTKHRVFA--CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                 A  T + +FA    P+V  Y ++I+G C+ G    AL +F+ M +        C
Sbjct: 436 KCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG------C 489

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
            PN  TY ++I GL ++  + KA  L  KM+++ I P V+ YT++I+G C  ++++ A R
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFR 549

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF  M   G+ PD   ++V+ D LCK+G+ ++A   L   + +GV     TY +L+DG+ 
Sbjct: 550 LFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFS 606

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                D A  L   M + GC  D+ +Y+ L+   CK K + EALS+  +M   G+K  +V
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
            Y  +   + +  + + A  LF+EM  +       TY  FI   CK G + EA  L   +
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 726

Query: 490 RDSKYELNIVSYNCLIDG 507
                  ++V+Y+  I+G
Sbjct: 727 ERDGVTPDVVTYHIFING 744



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L     K   +D    LF+ +   GL PD   +++L +  CK GR    +  
Sbjct: 526 PGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L   +R       VT+TSL+ G         AA L  K     C+ D++TY+ L+  LC+
Sbjct: 586 L---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL++ ++M       GV C  N V Y  II  + KEG  D AK LF +M     
Sbjct: 643 QKKLNEALSILDQMTVS----GVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P   TYT  I  +C      EA+ L  EM   GV PDVVT+ + ++     G MD+A  
Sbjct: 697 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFS 756

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTD----------------KIDHARKLFVSMESNG 388
            L+ M+     PN +TY  L+  +                    +++   +L   M  +G
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHG 816

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
               VV+Y+++I  +CK   +EEA  L   ML K I P    Y  L     +I    + +
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDV 876

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               +M          +Y+  I GLC  G    A  LF  +    Y  N V++  L DGL
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 183/422 (43%), Gaps = 42/422 (9%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++ +L   L K             + + GL P++  ++ +I+ +CK+G V     V  
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFK 482

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      PNA T+ SLI GL  + ++ +A AL TK +     P V  Y TLI G C+  
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH 542

Query: 227 HTIVALNLFEEM-ANG--------NGEFGVVCKPN-----------------TVTYNTII 260
               A  LFE M  NG        N     +CK                    VTY +++
Sbjct: 543 EFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLV 602

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DG  K G  D A  L  KM +E    D+ TY+ +++  C     NEA  +  +M   GV+
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK 662

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            ++V +++I+ E+ K GK D A  L   MI  G  P+  TY   I  YC   +I+ A  L
Sbjct: 663 CNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHL 722

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL---FL- 436
              ME +G   DVV+Y+  IN       ++ A S    M+    +P   TY  L   FL 
Sbjct: 723 IGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782

Query: 437 ------------GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
                       G++   ++    +L + M ++ +     TY++ I G CK+  + EA  
Sbjct: 783 MSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACV 842

Query: 485 LF 486
           L 
Sbjct: 843 LL 844



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 71/328 (21%)

Query: 251 PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND-----W- 304
           P+TVTYNT+I   CK+G +  A   F  +++  +  D  T  +++ G+C  +D     W 
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 305 -----------------------------NEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
                                         EA  L   M+  G   ++  +++++  LCK
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G++  A  LL+ M  RGV P+ +TYN +IDGYC + ++  A  +   ME NGC  D  +
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL----- 450
           YN+LI   C  K ++EA  L +  +++G  PTV+T+  L  G  +  +++ AL++     
Sbjct: 357 YNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 451 ------------------------------FDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
                                          +EM  N +A +   Y + IDG CK G V 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
            ALE+F+ +       N  +Y  LI GL
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGL 503



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 22/342 (6%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++++L   L K K  +  LS+  ++  +G+  +I  ++I+I+   K G+  H   +   +
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           + S   P+A T+T  I   C   +I EA  L  +       PDV TY+  ING    G+ 
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYM 751

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK----------------A 272
             A +  + M + +      C+PN  TY  ++    K   ++                  
Sbjct: 752 DRAFSTLKRMVDAS------CEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTV 805

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
            +L  +M    +NP VVTY+S+I GFC A    EA  L   M+ + + P+   +++++  
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKC 865

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
            C      K    +  MI  G  P   +Y+ LI G C     D A+ LF  +      H+
Sbjct: 866 CCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHN 925

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
            V++  L +   K   V+    L + M ++  +    +Y+ L
Sbjct: 926 EVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 150/327 (45%), Gaps = 17/327 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEAL I D M  +      + ++ I+   + K   +D   SLF  + S+G  P   T+++
Sbjct: 647 NEALSILDQM-TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            I+ +CK+G++     ++G + R   TP+ VT+   I G C     M+ A    K  V A
Sbjct: 706 FISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFING-CGHMGYMDRAFSTLKRMVDA 764

Query: 208 -CEPDVFTYNTLINGLCR----TGHTI--------VALNLFEEMANGNGEFGVVCKPNTV 254
            CEP+ +TY  L+    +      H I        + LN   ++     + G+   P  V
Sbjct: 765 SCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL--NPTVV 822

Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
           TY++II G CK   +++A  L   M  + I+P+   YT +I+  C    + +      +M
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDM 882

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           ++ G QP + ++  ++  LC  G  D+A  L   ++    N N   +  L DG      +
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHV 942

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLIN 401
           D   +L  +M++  C  D  SY+ L +
Sbjct: 943 DFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 1/252 (0%)

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN  +  L +    +   +L+  +  E + PD VTY ++I  +C       A R F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
           + G+Q D  T + ++   C+   + KA  LL +M   G   N Y+Y  LI G      + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A  L   M  +GC  ++  Y  LI   CK   + +A  L  EM  +G+ P+V TYN + 
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
            G  +  +++ AL +   M +N    D +TYN+ I GLC  G + EA EL        + 
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 496 LNIVSYNCLIDG 507
             ++++  LI+G
Sbjct: 386 PTVITFTNLING 397



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 99/200 (49%)

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
           +L+  ++ +G+ PD VT++ ++   CK G +  A R   L+   G+  +TYT N L+ GY
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C T  +  A  L + M   GC  +  SY  LI    + + V EAL L   M+  G    +
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
             Y  L  GL +  ++  A  L DEM    V    +TYN  IDG CKSG + +AL +   
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 489 IRDSKYELNIVSYNCLIDGL 508
           +  +    +  +YN LI GL
Sbjct: 345 MEQNGCNPDDWTYNSLIYGL 364



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 63/148 (42%)

Query: 361 YNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEML 420
           YN  +      D  ++  KL+  +   G + D V+YNT+I  YCK   +  A   +  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 421 SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
             G++    T N L LG      + +A  L   M       + Y+Y   I GL ++  V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 481 EALELFRAIRDSKYELNIVSYNCLIDGL 508
           EAL L   +      LN+  Y  LI GL
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGL 294


>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g61520, mitochondrial; Flags: Precursor
 gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
 gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 23/447 (5%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L +F+   CK++          N A  I   +++ + +P     FN L  CL +N     
Sbjct: 262 LTRFISSLCKNA--------RANAAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMDISR 312

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL------RSCFTPNAVT 179
           +  L  +++   + PD+ T  ILIN  CK  RV     V  ++        +    +++ 
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH 372

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           F +LI GLC   R+ EA  L  + ++   C P+  TYN LI+G CR G    A  +   M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KPN VT NTI+ G+C+   ++ A   F+ M+ E +  +VVTY ++I   
Sbjct: 433 KEDE------IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  ++  +A   + +M++ G  PD   +  ++  LC+  +   A R++E +   G + + 
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             YN LI  +C  +  +   ++   ME  G   D ++YNTLI+++ K+KD E    +  +
Sbjct: 547 LAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFIDGLCKSG 477
           M   G+ PTV TY  +      + +++ ALKLF +M   + V  +T  YN  I+   K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCL 504
              +AL L   ++      N+ +YN L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 219/466 (46%), Gaps = 52/466 (11%)

Query: 88  NEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNK--HYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  + D ML+     PP   + +I+   + K +    + +++L  R +S G+ P+   
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVW 261

Query: 145 HSILINCFCKMGRVSHGFVVLGRILR--------------SCF----------------- 173
            +  I+  CK  R +  + +L  +++              SC                  
Sbjct: 262 LTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMD 321

Query: 174 ----TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF------ACEPDVFTYNTLINGLC 223
                P+ VT   LI  LC   R+ EA  +F K R          + D   +NTLI+GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLC 381

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A  L   M     +    C PN VTYN +IDG C+ G ++ AKE+  +MK++ 
Sbjct: 382 KVGRLKEAEELLVRM-----KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+VVT  +++ G C  +  N A   F++M  +GV+ +VVT+  ++   C    ++KA 
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
              E M+  G +P+   Y  LI G C   +   A ++   ++  G   D+++YN LI  +
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ-VERALKLFDEMRRNHVAAD 462
           C   + E+   + ++M  +G KP  +TYNTL +  F  H+  E   ++ ++MR + +   
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTL-ISFFGKHKDFESVERMMEQMREDGLDPT 615

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIR-DSKYELNIVSYNCLIDG 507
             TY   ID  C  G + EAL+LF+ +   SK   N V YN LI+ 
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 42/373 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    +T   +  R+    + P++ T + ++   C+   ++   V 
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +     N VT+ +LI   C+ S + +A   + K     C PD   Y  LI+GLC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ + E++  G          + + YN +I   C +   +K  E+   M+ E  
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSL------DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY ++I  F    D+   +R+  +M + G+ P V T+  ++D  C  G++D+A +
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637

Query: 345 LLELM-IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           L + M +   VNPNT  YN L                                   IN +
Sbjct: 638 LFKDMGLHSKVNPNTVIYNIL-----------------------------------INAF 662

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +  +ALSL  EM  K ++P V TYN LF  L E  Q E  LKL DEM       + 
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQ 722

Query: 464 YTYNNFIDGLCKS 476
            T    ++ L  S
Sbjct: 723 ITMEILMERLSGS 735



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 178/402 (44%), Gaps = 31/402 (7%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI---LRSCFTPNAVTF 180
           D +L L++      +   +   ++LI  F +MG V+   +V  R+   +++    N V  
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVD 193

Query: 181 TSLIKGLCAES-----RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
             L  GL  ++      +++  ++F  +R+ A   D+  +      L      I  ++ F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITA---DIVLHEVWKGRLLTEEKIIALISRF 250

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                     GV   PN+V     I  LCK    + A ++   +       +   + +++
Sbjct: 251 -------SSHGV--SPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALL 301

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-- 353
                  D +    L ++M +  ++PDVVT  ++++ LCK+ ++D+A  + E M  RG  
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKR 359

Query: 354 ------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-SNGCMHDVVSYNTLINWYCKN 406
                 +  ++  +NTLIDG C   ++  A +L V M+    C  + V+YN LI+ YC+ 
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +E A  + S M    IKP VVT NT+  G+   H +  A+  F +M +  V  +  TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I   C    V +A+  +  + ++    +   Y  LI GL
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+  ++ ML    SP     + ++ G     + +D +  + ++L   G   D+  +++L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLKEGGFSLDLLAYNML 552

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC        + +L  + +    P+++T+ +LI              +  + R    
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P V TY  +I+  C  G    AL LF++M            PNTV YN +I+   K G 
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMG-----LHSKVNPNTVIYNILINAFSKLGN 667

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +A  L  +MK + + P+V TY ++ +            +L  EM++Q  +P+ +T  +
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727

Query: 329 IMDELCKNGKMDKASRLLE 347
           +M+ L  + ++ K  + ++
Sbjct: 728 LMERLSGSDELVKLRKFMQ 746



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 129/313 (41%), Gaps = 42/313 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N + G + ++   +  +  F  +   G+  ++ T+  LI+  C +  V      
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +  +P+A  + +LI GLC   R  +A  +  K +      D+  YN LI   C 
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT-------------------------- 258
             +T     +  +M           KP+++TYNT                          
Sbjct: 559 KNNTEKVYEMLTDMEKEGK------KPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612

Query: 259 ---------IIDGLCKEGFVDKAKELFLKMK-DENINPDVVTYTSVIRGFCYANDWNEAK 308
                    +ID  C  G +D+A +LF  M     +NP+ V Y  +I  F    ++ +A 
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM  + V+P+V T++ +   L +  + +   +L++ M+ +   PN  T   L++  
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732

Query: 369 CLTDKIDHARKLF 381
             +D++   RK  
Sbjct: 733 SGSDELVKLRKFM 745


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 213/474 (44%), Gaps = 76/474 (16%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP V +++       K + +D    +F+ +       +  T++++I+  C+ G V   F 
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 301

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
               ++    +P+A T+ +L+ GLC   R+ EA AL  +      +P+V  Y TL++G  
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A ++  EM +     GV  +PN + Y+ +I GLCK G + +A +L  +M    
Sbjct: 362 KEGKAAEAFDILNEMISA----GV--QPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
             PD  TY  +++G     D + A  L  EM + G+ P+  T+ ++++ LC+NG+  +A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 344 RLLELMIWRGVNPNTYTY-----------------------------------NTLIDGY 368
            LLE MI  G+ PN + Y                                   N+LI G 
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
               +I+ A + +  ++  G + D  +Y+ LI+ YCK +++E+A  L  +ML+ G+KP  
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 429 VTYNTLFLGLFEIHQVER-----------------------------------ALKLFDE 453
            TY  L  G F+ +  E+                                   A  +  E
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           + +N +  D + Y++ I GLCK   + +A+ L   +     E  IV YN LIDG
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 709



 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 218/467 (46%), Gaps = 64/467 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  L   L K        +L   ++ +GL P++  ++ L++ F K G+ +  F +
Sbjct: 313 PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDI 372

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL-------------FTKHRVFACE-- 209
           L  ++ +   PN + + +LI+GLC   ++  A+ L             FT H +      
Sbjct: 373 LNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQ 432

Query: 210 --------------------PDVFTYNTLINGLCRTGHTIVALNLFEEMAN--------- 240
                               P+ +TY  +INGLC+ G +  A NL EEM +         
Sbjct: 433 HYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFM 492

Query: 241 ---------GNGEFGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
                      G   + C+           P+   YN++I GL   G +++A+E + +++
Sbjct: 493 YAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ 552

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              + PD  TY+ +I G+C   +  +A +L  +M++ G++P+  T++ +++   K+   +
Sbjct: 553 KRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHE 612

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           K S +L+ M+  G  P+ + Y  +I     ++ ++ A  +   +E NG + D+  Y++LI
Sbjct: 613 KVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLI 672

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +  CK  D+E+A+ L  EM  +G++P +V YN L  G      + RA  +FD +    + 
Sbjct: 673 SGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLL 732

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            +  TY   IDG CK+G + +A +L++ + D     +   YN L  G
Sbjct: 733 PNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 187/389 (48%), Gaps = 7/389 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++ I+   L +N       +L + + S GL P+ + ++ LI    K G +S     
Sbjct: 453 PNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACES 512

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + ++   P+   + SLIKGL    RI EA   + + +     PD FTY+ LI+G C+
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 572

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           T +   A  L ++M N         KPN  TY  +++G  K    +K   +   M     
Sbjct: 573 TRNLEKADQLLQQMLNSG------LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD   Y  VIR    + +   A  +  E+   G+ PD+  +S ++  LCK   M+KA  
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           LL+ M   G+ P    YN LIDG+C +  I  AR +F S+ + G + + V+Y  LI+  C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           KN D+ +A  LY +ML +GI P    YN L  G  +   +E+AL L +EM  N   A   
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYAHVS 805

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSK 493
            ++  + G CK G + E  +L   + D +
Sbjct: 806 LFSTLVRGFCKRGRLQETEKLLHVMMDRE 834



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 183/397 (46%), Gaps = 6/397 (1%)

Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
           N L   L +    + V  L   +  AG+ PD+YT+S  +   CK         V   + R
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRR 273

Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
                N VT+  +I GLC    + EA     +   +   PD FTY  L+NGLC+ G    
Sbjct: 274 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKE 333

Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
           A  L +EM+          KPN V Y T++DG  KEG   +A ++  +M    + P+ + 
Sbjct: 334 AKALLDEMSCSG------LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIM 387

Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
           Y ++IRG C       A +L  EM+  G +PD  T+  +M    ++   D A  LL  M 
Sbjct: 388 YDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR 447

Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
             G+ PN YTY  +I+G C   +   A  L   M S G   +   Y  LI  + K   + 
Sbjct: 448 NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHIS 507

Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
            A      M    + P +  YN+L  GL  + ++E A + + ++++  +  D +TY+  I
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLI 567

Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            G CK+  + +A +L + + +S  + N  +Y  L++G
Sbjct: 568 HGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEG 604



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 208/443 (46%), Gaps = 30/443 (6%)

Query: 89  EALCIFDYMLRMHPSPPPV------------------------SSFNILFGCLAKNKHYD 124
           +A  +   M+  HP PP V                        +  ++L     KN    
Sbjct: 133 QANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAVLDVLVDTYKKNGSVR 192

Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
           T   +   +   GL P     + L+    +   +   + + G +  +   P+  T+++ +
Sbjct: 193 TAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFL 252

Query: 185 KGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 244
           +  C       A  +F + R   C  +  TYN +I+GLCR+G    A    EEM +    
Sbjct: 253 EAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD---- 308

Query: 245 FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
           +G+   P+  TY  +++GLCK G + +AK L  +M    + P+VV Y +++ GF      
Sbjct: 309 YGL--SPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKA 366

Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
            EA  +  EM+  GVQP+ + +  ++  LCK G++ +AS+LL  MI  G  P+T+TY+ L
Sbjct: 367 AEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPL 426

Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
           + G+      D A +L   M ++G + +  +Y  +IN  C+N + +EA +L  EM+S+G+
Sbjct: 427 MQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGL 486

Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
           KP    Y  L +G  +   +  A +  + M + +V  D + YN+ I GL   G + EA E
Sbjct: 487 KPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE 546

Query: 485 LFRAIRDSKYELNIVSYNCLIDG 507
            +  ++      +  +Y+ LI G
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHG 569



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 181/361 (50%), Gaps = 11/361 (3%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N L   L+     +     + ++   GL PD +T+S LI+ +CK   +     +
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L ++L S   PNA T+T L++G    +   + +++         +PD   Y  +I  L R
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
           + +  VA  +  E+       G+V  P+   Y+++I GLCK   ++KA  L  +M  E +
Sbjct: 643 SENMEVAFMVLTEVEKN----GLV--PDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P +V Y ++I GFC + D + A+ +F  ++ +G+ P+ VT++ ++D  CKNG +  A  
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFD 756

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME--SNGCMHDVVSYNTLINW 402
           L + M+ RG+ P+ + YN L  G   +D  D  + LF++ E  + G  H V  ++TL+  
Sbjct: 757 LYKDMLDRGIAPDAFVYNVLATG--CSDAADLEQALFLTEEMFNRGYAH-VSLFSTLVRG 813

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
           +CK   ++E   L   M+ + I P   T   +     +  ++  A ++F E+++   +  
Sbjct: 814 FCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQS 873

Query: 463 T 463
           +
Sbjct: 874 S 874



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 163/389 (41%), Gaps = 58/389 (14%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP------------------------ 210
           P+A  F  L   LCA S   +A  L   H++    P                        
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLL--HQMILAHPHPPLVLASIQRAIQDSDARSPSPS 170

Query: 211 --------DVFTYNTLINGLCRTGHTIVAL--------------NLFEEMANGNG-EF-- 245
                   DV       NG  RT   +V +               L +++   +  E   
Sbjct: 171 PSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVW 230

Query: 246 -------GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                  G    P+  TY+T ++  CK    D AK++F +M+  +   + VTY  +I G 
Sbjct: 231 KLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 290

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C +    EA     EM+D G+ PD  T+  +M+ LCK G++ +A  LL+ M   G+ PN 
Sbjct: 291 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNV 350

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             Y TL+DG+    K   A  +   M S G   + + Y+ LI   CK   +  A  L +E
Sbjct: 351 VVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE 410

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           M+  G +P   TY+ L  G F+ +  + A +L +EMR + +  + YTY   I+GLC++G 
Sbjct: 411 MIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE 470

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
             EA  L   +     + N   Y  LI G
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIG 499



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 153/335 (45%), Gaps = 25/335 (7%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +   ML     P   +  ++L G    N H + V S+ + +  +G  PD + + I+I   
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDH-EKVSSILQSMLGSGDKPDNHIYGIVIRNL 640

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            +   +   F+VL  + ++   P+   ++SLI GLC  + + +A  L  +      EP +
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700

Query: 213 FTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
             YN LI+G CR+G    A N+F+  +A G         PN VTY  +IDG CK G +  
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKG-------LLPNCVTYTALIDGNCKNGDITD 753

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A +L+  M D  I PD   Y  +  G   A D  +A  L  EM ++G    V  FS ++ 
Sbjct: 754 AFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVR 812

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK G++ +  +LL +M+ R + PN  T   +I  +    K+  A ++F  ++      
Sbjct: 813 GFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQ 872

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                 +L               L+++M++KG+ P
Sbjct: 873 SSTDRFSL---------------LFTDMINKGLIP 892



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 100/202 (49%)

Query: 307 AKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID 366
           A ++ + M D G+ P     + ++ +L +   M+   +L   M   G+ P+ YTY+T ++
Sbjct: 194 AAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLE 253

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
            +C     D A+K+F  M    C  + V+YN +I+  C++  VEEA     EM+  G+ P
Sbjct: 254 AHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSP 313

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
              TY  L  GL +  +++ A  L DEM  + +  +   Y   +DG  K G   EA ++ 
Sbjct: 314 DAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDIL 373

Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
             +  +  + N + Y+ LI GL
Sbjct: 374 NEMISAGVQPNKIMYDNLIRGL 395



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 10/223 (4%)

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           P    +  +    C A+ + +A  L  +M+     P +V  S+      +    D  +R 
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASI------QRAIQDSDARS 166

Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
                      +T   + L+D Y     +  A ++ + M   G        N L+    +
Sbjct: 167 PSPSPSH----STAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLR 222

Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
              +E    L   M   GI P V TY+T      +    + A K+F+EMRR   A +  T
Sbjct: 223 ADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 282

Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           YN  I GLC+SG V EA      + D     +  +Y  L++GL
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 325


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 221/468 (47%), Gaps = 78/468 (16%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           AL +FD M R       + S N +   LA+       +++F+++  AG  PD +T +I+ 
Sbjct: 192 ALQVFDEM-RTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMA 250

Query: 150 NCFCKMGRVSH-------------------------GFVVLG------RILRSC----FT 174
             +CK+  V H                         G+  +G      R+L S     F+
Sbjct: 251 KAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFS 310

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHR----------VFAC---------------- 208
           PN VT+T L+KG C E  + EA  +  + R          VF                  
Sbjct: 311 PNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAAR 370

Query: 209 ----------EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
                     + ++F YN +ING C+ G  + A N+  EM       GV  +P+T +YN+
Sbjct: 371 LLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT------GVGVRPDTYSYNS 424

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           ++DG CK+G ++KA E +  M         +TY ++++GFC     ++A RL+  M+ +G
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           + P+ ++ S ++D   K+GK +KA  L +  + RG+  NT T+NT+I+G C  +++  A 
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAE 544

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           +L   M+   C  D+++Y TL + YCK  D++ A  + +E+ + G  PT+  +N+L  G 
Sbjct: 545 ELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
           F   Q  +   +  EM    ++ +T  Y   I G CK G +  A  L+
Sbjct: 605 FIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY 652



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 212/431 (49%), Gaps = 22/431 (5%)

Query: 93  IFDYMLRMHPSPPPV---------------SSFNILFGCLAKNKHYDTVLSLFKRLNSAG 137
           I   +L   P  PP+               +SF++L   LA     D  L +F  + + G
Sbjct: 144 ILASLLSARPPAPPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLG 203

Query: 138 LFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAA 197
               + + + ++N   + G +     V  ++ R+   P+  T   + K  C    ++ A 
Sbjct: 204 CRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHAL 263

Query: 198 ALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYN 257
               +      E ++  Y+ ++NG C  G T  A  + + +  G G       PN VTY 
Sbjct: 264 EFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP-GRG-----FSPNIVTYT 317

Query: 258 TIIDGLCKEGFVDKAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
            ++ G C E  +++A+ +  ++ K++ +  D   + +VI G+C      +A RL  EM+D
Sbjct: 318 LLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVD 377

Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
             +Q ++  ++++++  CK G+M +A  +L  M   GV P+TY+YN+L+DGYC    ++ 
Sbjct: 378 SRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNK 437

Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           A + + +M  NG     ++YN L+  +C    +++AL L+  ML KGI P  ++ +TL  
Sbjct: 438 AFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLD 497

Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
           G F+  + E+AL L+ E     +A +T T+N  I+GLCK   + EA EL   ++  +   
Sbjct: 498 GFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPP 557

Query: 497 NIVSYNCLIDG 507
           +I++Y  L  G
Sbjct: 558 DIITYRTLFSG 568



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 212/447 (47%), Gaps = 33/447 (7%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N+A   ++ MLR   +   ++ +N L          D  L L+  +   G+ P+  + S 
Sbjct: 436 NKAFETYNTMLRNGFAATTLT-YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST 494

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++ F K G+      +    L      N  TF ++I GLC   R+ EA  L  K + + 
Sbjct: 495 LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR 554

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           C PD+ TY TL +G C+ G    A  +  E+ N      +   P    +N++I G     
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELEN------LGFAPTIEFFNSLITGHFIAK 608

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
              K  ++  +M +  ++P+ V Y ++I G+C   D + A  L++EM+++G+ P++   S
Sbjct: 609 QHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICS 668

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYT--------------------------Y 361
            ++    + GK D+A+ +L+ ++   + P+                             +
Sbjct: 669 SLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMW 728

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N +I G C   +I+ A+ L   ++  G + D  +Y++LI+    +  V+ A  L   MLS
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G+ P +VTYN+L  GL +  ++ RA+ LF ++    ++ +  TYN  ID  CK G++ E
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A +L + + +      + +Y+ LI+GL
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGL 875



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 171/373 (45%), Gaps = 26/373 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI-YTHSILINCFCKMGRVSHGF 162
           PP + ++  LF    K    D    +   L + G  P I + +S++   F       HG 
Sbjct: 556 PPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAK---QHGK 612

Query: 163 V--VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
           V  +L  +     +PN V + +LI G C E  +  A  L+ +       P++F  ++L++
Sbjct: 613 VNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVS 672

Query: 221 GLCRTG---------HTIVALNLFEEMANGNGEFGVVCK-----------PNTVTYNTII 260
              R G           +V  ++  +++    E G V                + +N +I
Sbjct: 673 CFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVI 732

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
            GLCK G ++ AK L   +KD+    D  TY+S+I G   +   + A  L   M+  G+ 
Sbjct: 733 FGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLT 792

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           P++VT++ ++  LCK+G++ +A  L + +  +G++PN  TYNTLID +C    I  A KL
Sbjct: 793 PNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKL 852

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              M   G    V +Y+ LIN  C    +EEA+ L  +M+   + P  VTY TL  G   
Sbjct: 853 KQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912

Query: 441 IHQVERALKLFDE 453
              V+  +   D+
Sbjct: 913 CESVDVPIMPLDQ 925



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 171/393 (43%), Gaps = 32/393 (8%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           +++ ++I+IN +CK+GR+     +L  +      P+  ++ SL+ G C +  + +A   +
Sbjct: 383 NLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
                        TYN L+ G C  G    AL L+  M            PN ++ +T++
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG------IAPNEISCSTLL 496

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DG  K G  +KA  L+ +     +  +  T+ +VI G C      EA+ L  +M      
Sbjct: 497 DGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCP 556

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
           PD++T+  +    CK G MD+ASR+L  +   G  P    +N+LI G+ +  +      +
Sbjct: 557 PDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI 616

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              M + G   + V+Y  LI  +CK  D+  A +LY EM+ KG+ P +   ++L    + 
Sbjct: 617 LFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYR 676

Query: 441 IHQVERALKLFDEMRRNHVAADTYT-------YNNFID-------------------GLC 474
             + + A  +   +    +  D            NFID                   GLC
Sbjct: 677 KGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLC 736

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           K G + +A  L   ++D  +  +  +Y+ LI G
Sbjct: 737 KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 211/422 (50%), Gaps = 9/422 (2%)

Query: 83  NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDI 142
           N     EA+ +F++M+ ++   P + +  +L   LAK++  D V  ++K++   G+  +I
Sbjct: 142 NTKMKQEAIQVFEHMM-VNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANI 200

Query: 143 YTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
           + +++LI+  CK G V     +L  +   C  P+  T+ +LI   C +    EA ++  +
Sbjct: 201 HVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 260

Query: 203 HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG 262
                 +PD+ TYN+LI+G C+ G    A+ LF+E+ +          PN VTY T+IDG
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--------PNHVTYTTLIDG 312

Query: 263 LCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
            C+   +D+A  L  +M+ + + P VVTY S++R  C      +A +L  EM ++ ++PD
Sbjct: 313 YCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPD 372

Query: 323 VVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
            VT + +++  CK G M  A ++   M+  G+  + +TY  LI G+C   ++D A++L +
Sbjct: 373 NVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLL 432

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
           SM   G      +Y+ L++ YC  ++ E  L L  E + KG+      Y  L     +  
Sbjct: 433 SMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKRE 492

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           QV+ A K+F  M+      D+  Y +      K G    A +L   +   +  + +  Y 
Sbjct: 493 QVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYR 552

Query: 503 CL 504
            L
Sbjct: 553 AL 554



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 199/400 (49%), Gaps = 9/400 (2%)

Query: 93  IFDYMLRMHPSPPPVSS-FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           +   ++R+H  P   S  F+ L    A  K     + +F+ +   G  P ++  ++L+N 
Sbjct: 115 VLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNS 174

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
             K       + V  ++ R     N   +  LI   C    + +A  L ++       PD
Sbjct: 175 LAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPD 234

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           +FTYNTLI+  C+ G    AL++ + M       G+  KP+ VTYN++I G CKEG + +
Sbjct: 235 LFTYNTLISLYCKKGMHYEALSVQDRMERE----GI--KPDIVTYNSLIHGFCKEGRMRE 288

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A  LF +++D    P+ VTYT++I G+C  ND ++A RL  EM  QG+ P VVT++ I+ 
Sbjct: 289 AMRLFKEIRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILR 346

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
           +LC+ G++  A++LL  M  + + P+  T NTLI+ YC    +  A K+   M   G   
Sbjct: 347 KLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKL 406

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D  +Y  LI+ +CK ++++ A  L   ML  G  P+  TY+ L  G       E  LKL 
Sbjct: 407 DQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLP 466

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           DE  R  +  D   Y   I   CK   V  A ++F  +++
Sbjct: 467 DEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQE 506



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 175/346 (50%), Gaps = 10/346 (2%)

Query: 164 VLGRILRSCFTP--NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
           VL  ++R    P  N+  F+ L+          EA  +F    V    P +     L+N 
Sbjct: 115 VLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNS 174

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           L +   T +   ++++MA      GV  + N   YN +I   CK G V+KA  L  +M+ 
Sbjct: 175 LAKDRLTDMVWKVYKKMA----RIGV--EANIHVYNVLIHACCKSGDVEKADNLLSEMES 228

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           + + PD+ TY ++I  +C      EA  +   M  +G++PD+VT++ ++   CK G+M +
Sbjct: 229 KCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMRE 288

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A RL + +  R   PN  TY TLIDGYC  + +D A +L   ME+ G    VV+YN+++ 
Sbjct: 289 AMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILR 346

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C+   + +A  L +EM  K I+P  VT NTL     +I  ++ ALK+ + M    +  
Sbjct: 347 KLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKL 406

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           D +TY   I G CK   +  A EL  ++ D+ +  +  +Y+ L+DG
Sbjct: 407 DQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDG 452



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 153/365 (41%), Gaps = 60/365 (16%)

Query: 74  CKSSGQGDI----NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
           CKS   GD+    NL++  E+ C+F          P + ++N L     K   +   LS+
Sbjct: 211 CKS---GDVEKADNLLSEMESKCVF----------PDLFTYNTLISLYCKKGMHYEALSV 257

Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKG--- 186
             R+   G+ PDI T++ LI+ FCK GR+     +   I  +  TPN VT+T+LI G   
Sbjct: 258 QDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCR 315

Query: 187 --------------------------------LCAESRIMEAAALFTKHRVFACEPDVFT 214
                                           LC   RI +A  L  +      EPD  T
Sbjct: 316 LNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT 375

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
            NTLIN  C+ G    AL +   M     E G+  K +  TY  +I G CK   +D AKE
Sbjct: 376 CNTLINAYCKIGDMKSALKVKNRMV----EAGL--KLDQFTYKALIHGFCKIREMDGAKE 429

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L L M D   +P   TY+ ++ G+C   +     +L  E + +G+  D   +  ++   C
Sbjct: 430 LLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFC 489

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K  ++D A ++  LM  +G   ++  Y +L   Y    K + A  L   M     M  + 
Sbjct: 490 KREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLK 549

Query: 395 SYNTL 399
            Y  L
Sbjct: 550 IYRAL 554


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 196/404 (48%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + +FN L   L  +   ++   +F+ +    + PD+ +++ +I  +CK G        
Sbjct: 223 PSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEK 282

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +    P+ +T+ +LI+   +E        L+ +      E     Y+ +I GLC+
Sbjct: 283 FTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCK 342

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G T+   ++FE M N  G     CK N   Y  +ID   K G V++A  LF +MK E  
Sbjct: 343 DGRTVEGSSVFENM-NKKG-----CKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGF 396

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD VTY  ++ G C +   +EA   F    D  V  + + +S ++D L K G++D+A +
Sbjct: 397 EPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEK 456

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             E M+ RG   ++Y YN LID    + K++ A  LF  ME  GC   V +Y  LI+   
Sbjct: 457 FFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLF 516

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K    EEAL L+  M+ KGI PT  ++  L +GL    +V RA K+ DE+    V  +T 
Sbjct: 517 KEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET- 575

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            + + I+ LCK+G   +A +L   I D   E+       LI+ L
Sbjct: 576 AFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINAL 619



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 183/373 (49%), Gaps = 9/373 (2%)

Query: 114 FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCF 173
           FG L      + +L +++R+  +G+ P +YT + L+N       +     V   +     
Sbjct: 200 FGALG---MVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKI 256

Query: 174 TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALN 233
            P+ V++ ++IKG C      +A   FT       EPD  TY TLI      G+    L+
Sbjct: 257 GPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLH 316

Query: 234 LFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTS 293
           L++EM     E G+   P+   Y+ +I GLCK+G   +   +F  M  +    +V  YT+
Sbjct: 317 LYQEME----ERGLEIPPHA--YSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTA 370

Query: 294 VIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
           +I  +    + NEA  LF  M  +G +PD VT+ VI++ LCK+G++D+A    E      
Sbjct: 371 LIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNE 430

Query: 354 VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
           V  N   Y++LIDG     ++D A K F  M   GC  D   YN LI+   K+  +EEAL
Sbjct: 431 VAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEAL 490

Query: 414 SLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
            L+  M  +G   TV TY  L  GLF+ H+ E ALKL+D M    +   T ++     GL
Sbjct: 491 VLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGL 550

Query: 474 CKSGFVLEALELF 486
           C SG V  A ++ 
Sbjct: 551 CLSGKVARACKIL 563



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 171/346 (49%), Gaps = 8/346 (2%)

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           + G      F        SLI+   A   + E   ++ + +    EP ++T+N L+NGL 
Sbjct: 177 IFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLV 236

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
            +     A  +FE M  G         P+ V+YNT+I G CK G   KA E F  M+  N
Sbjct: 237 NSMFIESAERVFEVMECGK------IGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRN 290

Query: 284 INPDVVTYTSVIRGFCYA-NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           + PD +TY ++I+  CY+  +++    L+ EM ++G++     +S+++  LCK+G+  + 
Sbjct: 291 LEPDKITYLTLIQA-CYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEG 349

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
           S + E M  +G   N   Y  LID Y     ++ A  LF  M+  G   D V+Y  ++N 
Sbjct: 350 SSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNG 409

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            CK+  ++EA+  +       +    + Y++L  GL +  +V+ A K F+EM       D
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQD 469

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +Y YN  ID L KSG + EAL LF+ +     +  + +Y  LI GL
Sbjct: 470 SYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGL 515



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 6/329 (1%)

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
           + SLI  L   S       +F + +       VF  N+LI      G     L ++  M 
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
               E G+  +P+  T+N +++GL    F++ A+ +F  M+   I PDVV+Y ++I+G+C
Sbjct: 218 ----ESGI--EPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYC 271

Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
            A +  +A   F +M  + ++PD +T+  ++      G  D    L + M  RG+    +
Sbjct: 272 KAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331

Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
            Y+ +I G C   +      +F +M   GC  +V  Y  LI+ Y KN +V EA++L+  M
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391

Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
             +G +P  VTY  +  GL +  +++ A++ F+  + N VA +   Y++ IDGL K+G V
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRV 451

Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
            EA + F  + +     +   YN LID L
Sbjct: 452 DEAEKFFEEMVERGCPQDSYCYNALIDAL 480



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 3/265 (1%)

Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL-KMKDENINPDVVTYTSVIRGFCYAN 302
           +F +   PN V +    D +   G  D A   F    K +N    +  Y S+I     ++
Sbjct: 112 KFLIKLSPNFVAFVLKSDAI--RGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSS 169

Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
           D++  + +F E  ++G    V   + ++      G +++   +   M   G+ P+ YT+N
Sbjct: 170 DFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFN 229

Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
            L++G   +  I+ A ++F  ME      DVVSYNT+I  YCK  + ++A+  +++M  +
Sbjct: 230 FLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKR 289

Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
            ++P  +TY TL    +     +  L L+ EM    +    + Y+  I GLCK G  +E 
Sbjct: 290 NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEG 349

Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
             +F  +     + N+  Y  LID 
Sbjct: 350 SSVFENMNKKGCKANVAIYTALIDA 374



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 42/284 (14%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V+ +  L     KN + +  ++LF+R+   G  PD  T+ +++N  CK GR+        
Sbjct: 365 VAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE 424

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
               +    NA+ ++SLI GL    R+ EA   F +     C  D + YN LI+ L ++G
Sbjct: 425 FCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSG 484

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL LF+ M          C     TY  +I GL KE   ++A +L+  M D+ I P
Sbjct: 485 KMEEALVLFKRMEKEG------CDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITP 538

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK-------- 338
              ++ ++  G C +     A ++  E+   GV P+   F  +++ LCK G+        
Sbjct: 539 TTASFRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLA 597

Query: 339 ---------------------------MDKASRLLELMIWRGVN 355
                                       D A +L+   I  G +
Sbjct: 598 DGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYD 641


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 203/406 (50%), Gaps = 17/406 (4%)

Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
           P PP V + NIL   L   +       + + L ++G   D  +H+ L+  +C+ G +   
Sbjct: 114 PEPPAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDA 172

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             VL    R+    N VT+T+LI G C   R+ +A  L     V    PD +TYNT++ G
Sbjct: 173 ERVL-EAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKG 228

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC       A  L  EM   N      C PN VT+ T I   C+ G +D+A EL  +M  
Sbjct: 229 LCFAKQWEEAEELMREMIRNN------CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPK 282

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
               PDVV Y++++ GF      ++A +L   M+    +P+ V ++  +  LC  G+ D+
Sbjct: 283 YGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDE 339

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
              L+  M+ +   PN  T++TLI+  C     ++A ++   M+  G M DVVSYNT+I+
Sbjct: 340 VGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIIS 399

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
            + +    ++AL L + ML    KP  +++N +   L    +   A +L  +M +     
Sbjct: 400 CFSEQACADDALKLLNSMLC---KPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHT 456

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  T+N  ID LC++G V +A+E+F  +   +   +IV+Y+ LI+G
Sbjct: 457 NEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLING 502



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 210/420 (50%), Gaps = 19/420 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +   M+R +  P  V+ F        +N   D  + L +++   G  PD+  +S L
Sbjct: 237 EAEELMREMIRNNCHPNEVT-FATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           +N F + GRV     +L  +L     PN V + + +KGLC   R  E   L  +     C
Sbjct: 296 VNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+  T++TLIN LC+      A+ + E+M     ++G +  P+ V+YNTII    ++  
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQ----KYGYM--PDVVSYNTIISCFSEQAC 406

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
            D A +L   M      PD +++ +V++  C A  W +A  L  +M+ +    + +TF++
Sbjct: 407 ADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNI 463

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++D LC+NG++  A  + ELM      P+  TY++LI+G+        A  LF SM    
Sbjct: 464 LIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP--- 520

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  D+ SYN  +   C     ++A  L ++M++K   P  VT+N L   L +   V RA+
Sbjct: 521 CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAI 580

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +++++M +  +  D +TYN  I+G  + G + +AL+    +     E + +SYN ++ GL
Sbjct: 581 EVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSILKGL 637



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 177/336 (52%), Gaps = 18/336 (5%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           PP  ++F+ L   L +N+  +  + + +++   G  PD+ +++ +I+CF +         
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALK 412

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +L  +L     P+ ++F +++K LC   R  +AA L  K     C  +  T+N LI+ LC
Sbjct: 413 LLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLC 469

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A+ +FE M          C P+ VTY+++I+G  ++G    A +LF  M    
Sbjct: 470 QNGQVKDAIEMFELMPKYR------CTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP--- 520

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              D+ +Y + ++G C A  W++A  L  +M+ +   P+ VTF+++++ LC+ G +++A 
Sbjct: 521 CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAI 580

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            + E M   G+ P+ +TYN LI+GY     +D A K   +M    C  D +SYN+++   
Sbjct: 581 EVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGL 637

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTY---NTLFL 436
           C+ +  ++A  L +EML K   P  VT+   N LF+
Sbjct: 638 CRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFI 673


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 191/402 (47%), Gaps = 10/402 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           PP+   N L   LA++     + SL  R+       +++T++ LIN +C  G +      
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +LR+   P++  +TS + G C       A  LF       C    FTY  L+ GLC 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ +F  M          C P++  Y+ ++ GLC  G   +A  L      +  
Sbjct: 157 AGMVREAMAVFAGMWPDG------CAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGF 210

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V  Y ++I G+C   D   A  +F  M  +G  P+V T++ ++   CK+GK+++A  
Sbjct: 211 VPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMV 270

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L   MI  G+ PN  TY TLI G C    ++HA +L  SME+ G   +  +   LI+  C
Sbjct: 271 LYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALC 330

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K+  +EEA      ++ KGIK   V Y ++   L +  + + A  L  ++       D +
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAH 390

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
            Y++ IDGLC+   +LEA+ L   + +S  + N V +  LID
Sbjct: 391 MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 6/380 (1%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
            +++F  +   G  PD + +SI+++  C  GR      +L   +   F PN   + +LI 
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
           G C+   +  A  +F   +   C P+V TY  LI G C++G    A+ L+  M     E 
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI----EA 278

Query: 246 GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWN 305
           G+   PN VTY T+I G C EG ++ A  L   M+   + P+  T   +I   C      
Sbjct: 279 GLA--PNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EA++    ++ +G++ + V ++ ++D LCK+GK D A  L++ +I  G  P+ + Y++LI
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
           DG C  +K+  A  L   M  +G   + V +  LI+ + +    +    +   M + G+K
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVK 456

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P VVTY        +  ++E A  +  +M  + V  +  TYN  I G    G V +A   
Sbjct: 457 PDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSS 516

Query: 486 FRAIRDSKYELNIVSYNCLI 505
            + + D+  + N  SY  L+
Sbjct: 517 LKNMIDNGCKPNDESYTVLL 536



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 199/490 (40%), Gaps = 92/490 (18%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V+ +N L          +  + +FK + S G  P++ T++ LI  FCK G+V    V+
Sbjct: 212 PNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVL 271

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             R++ +   PN VT+T+LI+G C+E  +  A  L          P+ +T   LI+ LC+
Sbjct: 272 YSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A      +     + G+  K N V Y ++ID LCK G  D A  L  K+  E  
Sbjct: 332 HGRIEEAQQFLGSLV----QKGI--KVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGF 385

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ------------------------ 320
            PD   Y+S+I G C  N   EA  L  +M++ GVQ                        
Sbjct: 386 VPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKM 445

Query: 321 -----------PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
                      PDVVT++V +   C++G+M+ A  ++  MI  GV PN  TYNTLI GY 
Sbjct: 446 ISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYA 505

Query: 370 LTDKIDHARKLFVSMESNGC-------------------MHDVVS--------------- 395
               +  A     +M  NGC                    HD+V+               
Sbjct: 506 NLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLE 565

Query: 396 -----------------YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
                            Y+  I    K   +EEA S    M S  + P+   Y  +    
Sbjct: 566 ELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECC 625

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
           + +  ++ AL+  D M + +      +Y   I  LC+ G    A  +F  I   +Y  + 
Sbjct: 626 YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDE 685

Query: 499 VSYNCLIDGL 508
           +++  LIDGL
Sbjct: 686 IAWKILIDGL 695



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 143/298 (47%), Gaps = 6/298 (2%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           ++ TY TLIN  C  G    A      +            P++  Y + + G C+ G   
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAG------LAPDSHAYTSFVLGYCRTGLFA 126

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
            A  LFL M          TY ++++G C A    EA  +F  M   G  PD   +S+++
Sbjct: 127 HACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMV 186

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
             LC  G+  +A  LL   + +G  PN   YN LIDGYC T  ++ A  +F  M+S GC+
Sbjct: 187 HGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL 246

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            +V +Y  LI  +CK+  VE A+ LYS M+  G+ P VVTY TL  G      +E A +L
Sbjct: 247 PNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRL 306

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              M    +A + +T    ID LCK G + EA +   ++     ++N V Y  +ID L
Sbjct: 307 LHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDAL 364



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 149/368 (40%), Gaps = 25/368 (6%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  +   L K+  +D   +L +++ + G  PD + +S LI+  C+  ++     +L  ++
Sbjct: 357 YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
            S    NAV FT LI     E R      +  +      +PDV TY   I   C+ G   
Sbjct: 417 ESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRME 476

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A ++  +M +     GV  +PN  TYNT+I G    G V +A      M D    P+  
Sbjct: 477 DAESMMIQMID----HGV--RPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           +YT ++      N +++            +  D ++   I+D       M     LLE +
Sbjct: 531 SYTVLLGLLLKKNSYHD------------LVADSISLWKIVD-------MKVLEELLEEV 571

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I    +  +Y Y+  I      D+++ A+   V M+S         Y  +I    + K +
Sbjct: 572 IKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLL 631

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           +EAL     M+ +   P + +Y  +   L E      A  +F ++       D   +   
Sbjct: 632 KEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKIL 691

Query: 470 IDGLCKSG 477
           IDGL + G
Sbjct: 692 IDGLLQKG 699



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 126/314 (40%), Gaps = 14/314 (4%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F IL     +    D+   +  R+ +AG+ PD+ T+++ I  +C+ GR+     ++ +++
Sbjct: 427 FTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMI 486

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG--H 227
                PN  T+ +LIKG      + +A +         C+P+  +Y  L+  L +    H
Sbjct: 487 DHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYH 546

Query: 228 TIVA----------LNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
            +VA          + + EE+        + C   +  Y+  I  L K   +++AK   +
Sbjct: 547 DLVADSISLWKIVDMKVLEELLEE--VIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLV 604

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            M+  N+ P    YT +I          EA R    M+ +   P + ++  I+  LC+ G
Sbjct: 605 GMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEG 664

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
               A  +   ++ +  N +   +  LIDG           +L   ME   C      Y+
Sbjct: 665 SFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724

Query: 398 TLINWYCKNKDVEE 411
            L        + +E
Sbjct: 725 RLTGEITVTSEAQE 738


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 188/386 (48%), Gaps = 7/386 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  + D M R H        +N L  C  + K    V  L + + + G+   + T++I
Sbjct: 149 DDARALLDEMPR-HGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTI 207

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L++     G +S    V+  +       +   +T++I   C    +  A+ +F +     
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EP+  TY  LING C+ G    A  L  +M  G G        N + +NT+IDG C++G
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLLADM-QGRG-----VGHNQIIFNTMIDGYCRQG 321

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            VD A ++   M+   I  DV TY ++  G C  N   EAK L   M+++GV P+ VT++
Sbjct: 322 MVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYT 381

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++   CK G M +A RL   M  +G  P+  TYN ++DGY     I  A +    ME  
Sbjct: 382 TLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKK 441

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + DV +Y +L++ +C N  V+ AL L+ EM  +G +P VV Y  L  GL +  + E A
Sbjct: 442 GLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEA 501

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGL 473
            +L+D+M +  +  D   Y+  +  L
Sbjct: 502 FQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 171/363 (47%), Gaps = 6/363 (1%)

Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
           S++++ FCK GRV     +L  + R     NA+ + SL+              L      
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
              E  V TY  L++ L   G       + +EM   N         +   Y  +I+  C+
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKN------VAGDVYLYTAVINAYCR 249

Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
            G V +A E+F +     I P+  TY  +I GFC       A+ L  +M  +GV  + + 
Sbjct: 250 AGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQII 309

Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
           F+ ++D  C+ G +D A ++   M   G+  + YTYNTL  G C  +++  A+ L   M 
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369

Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
             G   + V+Y TLI+ +CK  D+ EA  L+ EM  KG  P+VVTYN +  G  +   + 
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429

Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
            A +   EM +  +  D YTY + + G C +G V  AL+LF  ++    E N+V+Y  LI
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALI 489

Query: 506 DGL 508
            GL
Sbjct: 490 SGL 492



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 6/231 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN +     +    D  L +   +   G+  D+YT++ L    C++ R++    +L  ++
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN VT+T+LI   C E  ++EA  LF +       P V TYN +++G  + G   
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A    +EM     + G+V  P+  TY +++ G C  G VD A +LF +MK     P+VV
Sbjct: 430 EAERFRKEME----KKGLV--PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVV 483

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
            YT++I G        EA +L+ +M+  G+ PD   +S ++  L  + + D
Sbjct: 484 AYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 42/88 (47%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++  L      N   D  L LF+ +   G  P++  ++ LI+   K GR    F +
Sbjct: 445 PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQL 504

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESR 192
              +L++  TP+   +++L+  L  ++R
Sbjct: 505 YDDMLKAGLTPDDSLYSALVGSLHTDNR 532


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 224/456 (49%), Gaps = 44/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EAL ++  M+ +    P V ++++L     K +  +TVL L + + + G+ P++Y+++I 
Sbjct: 257 EALEVYKVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 315

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    +  R    + +L  +      P+ +T T LI+ LC   RI +A  +F K +    
Sbjct: 316 IRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 375

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY TL++     G +   + ++  M A+G  +       N V Y  +ID LC+ G
Sbjct: 376 KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYND-------NVVAYTAVIDALCQVG 428

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---------------- 311
            V +A E+F +MK + I P+  +Y S+I GF  A+ + +A  LF                
Sbjct: 429 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHV 488

Query: 312 ------------------IEMM-DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                              E+M  +G+ PDVV  + ++  L K+G++  A R+   +   
Sbjct: 489 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 548

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+P+T TY  +I       K D A K+F  M  N C+ DV+  N+LI+   K    +EA
Sbjct: 549 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEA 608

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             ++ ++    ++PT  TYNTL  GL    +V+  + L +EM  ++   +  TYN  +D 
Sbjct: 609 WQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 668

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LCK+G V +AL++  ++       ++ SYN +I GL
Sbjct: 669 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 704



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 203/439 (46%), Gaps = 43/439 (9%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P +SS+N +   L K + Y+   S+F ++    L PD  T   ++  F K+G +     +
Sbjct: 692  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHI 750

Query: 165  LGR--------------------ILRSCFTPNAVTFTS----------------LIKGLC 188
            +                      IL+   T  ++ F                  LIK LC
Sbjct: 751  IKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLC 810

Query: 189  AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
             + + +EA  L  K + F       +YN+LI GL       +A  LF EM     E G  
Sbjct: 811  KQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMK----ELG-- 864

Query: 249  CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            C P+  TYN ++D + K   +++  ++  +M  +      VTY ++I G   +    +A 
Sbjct: 865  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 924

Query: 309  RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
             L+  +M QG  P   T+  ++D L K G+++ A  L   M+  G   N   YN L++G+
Sbjct: 925  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 984

Query: 369  CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
             +    +    LF  M   G   D+ SY  +I+  CK   + + L+ + ++L  G++P +
Sbjct: 985  RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1044

Query: 429  VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
            +TYN L  GL +  ++E A+ LF+EM++  +  + YTYN+ I  L K+G   EA +++  
Sbjct: 1045 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1104

Query: 489  IRDSKYELNIVSYNCLIDG 507
            +    ++ N+ +YN LI G
Sbjct: 1105 LLTKGWKPNVFTYNALIRG 1123



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 202/454 (44%), Gaps = 65/454 (14%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +  H   P V S+ I    L + + +D    +   + + G  PD+ TH++LI   C  GR
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGR 359

Query: 158 VSHGFVVLGRILRSCFTP-----------------------------------NAVTFTS 182
           +S    V  ++ +S   P                                   N V +T+
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTA 419

Query: 183 LIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM---- 238
           +I  LC   R+ EA  +F + +     P+ ++YN+LI+G  +      AL LF+ M    
Sbjct: 420 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHG 479

Query: 239 -----------ANGNGEFGVVCK--------------PNTVTYNTIIDGLCKEGFVDKAK 273
                       N  G+ G   K              P+ V  N ++ GL K G +  AK
Sbjct: 480 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 539

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            +F ++K   ++PD +TYT +I+    A+ ++EA ++F +M++    PDV+  + ++D L
Sbjct: 540 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTL 599

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
            K G+ D+A ++   +    + P   TYNTL+ G     K+     L   M  +    ++
Sbjct: 600 YKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNL 659

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
           ++YNT+++  CKN  V +AL +   M +KG  P + +YNT+  GL +  +   A  +F +
Sbjct: 660 ITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 719

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
           M++  +  D  T    +    K G + EAL + +
Sbjct: 720 MKKVLI-PDYATLCTILPSFVKIGLMKEALHIIK 752



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 194/416 (46%), Gaps = 7/416 (1%)

Query: 93  IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
           +FD M R       V +F  +FG L       +       +  AG+  + YT++ L+   
Sbjct: 191 VFDVMQR-QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 249

Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
            K G       V   ++     P+  T++ L+        +     L  +      +P+V
Sbjct: 250 VKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 309

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           ++Y   I  L +      A  +  EM N        CKP+ +T+  +I  LC  G +  A
Sbjct: 310 YSYTICIRVLGQARRFDEAYRILAEMENEG------CKPDVITHTVLIQVLCDAGRISDA 363

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
           K++F KMK  +  PD VTY +++  F    +      ++  M   G   +VV ++ ++D 
Sbjct: 364 KDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDA 423

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LC+ G++ +A  + + M  +G+ P  Y+YN+LI G+   D+   A +LF  M+ +G   +
Sbjct: 424 LCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPN 483

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
             ++   IN+Y K+ +  +A+  Y  M SKGI P VV  N +  GL +  ++  A ++F 
Sbjct: 484 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 543

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           E++   V+ DT TY   I    K+    EA+++F  + ++    +++  N LID L
Sbjct: 544 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTL 599



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 187/390 (47%), Gaps = 6/390 (1%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             EAL I         S    SS + L   + K    +  +   + + S+G+  D +    
Sbjct: 745  KEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCP 804

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI   CK  +      ++ +      +    ++ SLI GL  E+ I  A  LF + +   
Sbjct: 805  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864

Query: 208  CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            C PD FTYN L++ + ++      L + EEM     E         VTYNTII GL K  
Sbjct: 865  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE------STYVTYNTIISGLVKSR 918

Query: 268  FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             +++A +L+  +  +  +P   TY  ++ G   A    +A+ LF EM++ G + +   ++
Sbjct: 919  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 978

Query: 328  VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            ++++     G  +K   L + M+ +G+NP+  +Y  +ID  C   +++     F  +   
Sbjct: 979  ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1038

Query: 388  GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
            G   D+++YN LI+   K+K +EEA+SL++EM  KGI P + TYN+L L L +  +   A
Sbjct: 1039 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1098

Query: 448  LKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
             K+++E+       + +TYN  I G   SG
Sbjct: 1099 GKMYEELLTKGWKPNVFTYNALIRGYSVSG 1128



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 6/323 (1%)

Query: 108  SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
             S+N L   L      D    LF  +   G  PD +T+++L++   K  R+     V   
Sbjct: 835  GSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 894

Query: 168  ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            + R  +    VT+ ++I GL    R+ +A  L+         P   TY  L++GL + G 
Sbjct: 895  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954

Query: 228  TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
               A NLF EM     E+G  CK N   YN +++G    G  +K   LF  M D+ INPD
Sbjct: 955  IEDAENLFNEML----EYG--CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1008

Query: 288  VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + +YT +I   C A   N+    F ++++ G++PD++T+++++D L K+ ++++A  L  
Sbjct: 1009 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 1068

Query: 348  LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
             M  +G+ PN YTYN+LI       K   A K++  + + G   +V +YN LI  Y  + 
Sbjct: 1069 EMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSG 1128

Query: 408  DVEEALSLYSEMLSKGIKPTVVT 430
              + A + Y  M+  G  P   T
Sbjct: 1129 STDSAYAAYGRMIVGGCLPNSST 1151



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 212/462 (45%), Gaps = 39/462 (8%)

Query: 77   SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
            +G+GD       EA  IF Y L+     P   ++N L   L +      V+ L + +  +
Sbjct: 602  AGRGD-------EAWQIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 653

Query: 137  GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
               P++ T++ +++C CK G V+    +L  +      P+  ++ ++I GL  E R  EA
Sbjct: 654  NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 713

Query: 197  AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------------- 243
             ++F + +     PD  T  T++    + G    AL++ +E     G             
Sbjct: 714  FSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLME 772

Query: 244  ------------EFGVVCKPNTVTYN-----TIIDGLCKEGFVDKAKELFLKMKDENINP 286
                        EF  +   + +T +      +I  LCK+    +A EL  K K   ++ 
Sbjct: 773  GILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSL 832

Query: 287  DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
               +Y S+I G    N  + A+ LF EM + G  PD  T+++++D + K+ ++++  ++ 
Sbjct: 833  KTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 892

Query: 347  ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
            E M  +G      TYNT+I G   + +++ A  L+ ++ S G      +Y  L++   K 
Sbjct: 893  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 952

Query: 407  KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              +E+A +L++EML  G K     YN L  G       E+   LF +M    +  D  +Y
Sbjct: 953  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 1012

Query: 467  NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
               ID LCK+G + + L  FR + +   E ++++YN LIDGL
Sbjct: 1013 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1054



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 189/414 (45%), Gaps = 10/414 (2%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKM--- 155
           R    PPP          +   +  D      +R  SA   P +   +   N    +   
Sbjct: 122 RARVQPPPRDERRAAEDVIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRD 181

Query: 156 -GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
            GRV     V   + R     N  TF ++  GL  E  +  A       +      + +T
Sbjct: 182 HGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYT 241

Query: 215 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
           YN L+  L ++G    AL +++ M       GVV  P+  TY+ ++    K   V+    
Sbjct: 242 YNGLVYFLVKSGFDREALEVYKVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLW 295

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           L  +M+   + P+V +YT  IR    A  ++EA R+  EM ++G +PDV+T +V++  LC
Sbjct: 296 LLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLC 355

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
             G++  A  +   M      P+  TY TL+D +    +     +++ +M+++G   +VV
Sbjct: 356 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVV 415

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  M
Sbjct: 416 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM 475

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +    + YT+  FI+   KSG  ++A++ +  ++      ++V+ N ++ GL
Sbjct: 476 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 6/151 (3%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P + S+ I+   L K    +  L+ F++L   GL PD+ T+++LI+   K  R+     +
Sbjct: 1007 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1066

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               + +    PN  T+ SLI  L    +  EA  ++ +      +P+VFTYN LI G   
Sbjct: 1067 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1126

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
            +G T  A   +  M  G       C PN+ T
Sbjct: 1127 SGSTDSAYAAYGRMIVGG------CLPNSST 1151


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 183/374 (48%), Gaps = 6/374 (1%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R H    P+     L   + K     T+   +  +  AG   ++Y  +IL+N FCK G +
Sbjct: 197 RKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNI 256

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
           S    V   I +    P  V+F +LI G C    + E   L  +       PDVFTY+ L
Sbjct: 257 SDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSAL 316

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           IN LC+      A  LF+EM     + G++  PN V + T+I G  + G +D  KE + K
Sbjct: 317 INALCKENKMDGAHGLFDEMC----KRGLI--PNDVIFTTLIHGHSRNGEIDLMKESYQK 370

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  + + PD+V Y +++ GFC   D   A+ +   M+ +G++PD +T++ ++D  C+ G 
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           ++ A  + + M   G+  +   ++ L+ G C   ++  A +    M   G   D V+Y  
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++ +CK  D +    L  EM S G  P+VVTYN L  GL ++ Q++ A  L D M    
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550

Query: 459 VAADTYTYNNFIDG 472
           V  D  TYN  ++G
Sbjct: 551 VVPDDITYNTLLEG 564



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 174/340 (51%), Gaps = 6/340 (1%)

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
           IL + F  N   F  L+   C E  I +A  +F +    + +P V ++NTLING C+ G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290

Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                 L  +M           +P+  TY+ +I+ LCKE  +D A  LF +M    + P+
Sbjct: 291 LDEGFRLKHQMEKSR------TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            V +T++I G     + +  K  + +M+ +G+QPD+V ++ +++  CKNG +  A  +++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404

Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
            MI RG+ P+  TY TLIDG+C    ++ A ++   M+ NG   D V ++ L+   CK  
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464

Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
            V +A     EML  GIKP  VTY  +     +    +   KL  EM+ +       TYN
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524

Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             ++GLCK G +  A  L  A+ +     + ++YN L++G
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 158/298 (53%), Gaps = 6/298 (2%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           +V+ +N L+N  C+ G+   A  +F+E+   +       +P  V++NT+I+G CK G +D
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRS------LQPTVVSFNTLINGYCKVGNLD 292

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
           +   L  +M+     PDV TY+++I   C  N  + A  LF EM  +G+ P+ V F+ ++
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352

Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
               +NG++D      + M+ +G+ P+   YNTL++G+C    +  AR +   M   G  
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412

Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
            D ++Y TLI+ +C+  DVE AL +  EM   GI+   V ++ L  G+ +  +V  A + 
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472

Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             EM R  +  D  TY   +D  CK G      +L + ++   +  ++V+YN L++GL
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 159/349 (45%), Gaps = 45/349 (12%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +FD + +     P V SFN L     K  + D    L  ++  +   PD++T+S 
Sbjct: 257 SDAQKVFDEITK-RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LIN  CK  ++     +   + +    PN V FT+LI G      I      + K     
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDG----- 262
            +PD+  YNTL+NG C+ G  + A N+ + M           +P+ +TY T+IDG     
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG------LRPDKITYTTLIDGFCRGG 429

Query: 263 ------------------------------LCKEGFVDKAKELFLKMKDENINPDVVTYT 292
                                         +CKEG V  A+    +M    I PD VTYT
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            ++  FC   D     +L  EM   G  P VVT++V+++ LCK G+M  A  LL+ M+  
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           GV P+  TYNTL++G+    +  ++ K ++     G + D+ SY +++N
Sbjct: 550 GVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIVADLASYKSIVN 595



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 128/234 (54%)

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
            ++++ D     +V  +  ++  FC   + ++A+++F E+  + +QP VV+F+ +++  C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           K G +D+  RL   M      P+ +TY+ LI+  C  +K+D A  LF  M   G + + V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            + TLI+ + +N +++     Y +MLSKG++P +V YNTL  G  +   +  A  + D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            R  +  D  TY   IDG C+ G V  ALE+ + +  +  EL+ V ++ L+ G+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 16/413 (3%)

Query: 100 MHPSPPPVSS--FN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           +H +  P++S  FN +++G   + + ++  L + + + S+G+ PD+Y++SILIN FC  G
Sbjct: 382 LHYTNQPLNSHSFNDVIYGFCKRGEVFEA-LQVLEEMKSSGILPDVYSYSILINAFCGKG 440

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            V     ++  +  S   P+ V++TSLI GLC ++ +  A  +F      +C+ D   Y 
Sbjct: 441 DVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYE 500

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLCKEGFVDKAK 273
           TLI+G C  G    A+ L EEM         +C    P   +  ++I G  K G  D+A 
Sbjct: 501 TLIDGFCMQGDMDSAIKLLEEM---------ICNELVPTAFSCRSLIRGYYKLGLFDQAL 551

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
           E+F  M  + I PD +    ++ G C A  + EA  L  +  + G   +  +++ I+ +L
Sbjct: 552 EVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKL 611

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK G  ++A  LL  M+ R V P+   Y+TLI G+        A  LF  M   G   ++
Sbjct: 612 CKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNI 671

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
            +Y  L++ +  +  + EA  ++ EM  +G+    ++Y TL +G     ++++A  LF+E
Sbjct: 672 ATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEE 731

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
           M R   + +  TY   IDG CKS  +  A  +F  +       ++V+Y  LID
Sbjct: 732 MSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLID 784



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 206/472 (43%), Gaps = 68/472 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
           P + + N L  CL +    + V  +F+ L   G  P+IYT++I++N +C       G   
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 163 --VVLGRILRSCFTPNAVTFTSLIKGL--------------------------------- 187
             V+LG+I RS   P  VT+++ I GL                                 
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399

Query: 188 --CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 245
             C    + EA  +  + +     PDV++Y+ LIN  C  G  +  L+L EEM +   + 
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKP 459

Query: 246 GVV-----------------------------CKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            +V                             CK ++  Y T+IDG C +G +D A +L 
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLL 519

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M    + P   +  S+IRG+     +++A  +F  M+  G+ PD +  + I+D  C+ 
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRA 579

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G   +A  LLE     G N N ++YN +I   C     + A +L   M     +  VV+Y
Sbjct: 580 GYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNY 639

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           +TLI+ + K  + + A++L++ M+  GI   + TY  L       H++  A  +F EM+ 
Sbjct: 640 STLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKE 699

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
             +  D  +Y   I G C +  + +A  LF  +       N+++Y C+IDG 
Sbjct: 700 RGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGF 751



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 37/396 (9%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           F++L    A N   +  L +F      GL PDI T + L+ C  +  RV     V   + 
Sbjct: 250 FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELK 309

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
               +PN  T+T ++   C++                 C+  +     ++  + R+G   
Sbjct: 310 DRGPSPNIYTYTIMMNFYCSD---------------VGCDAGMRQAAVILGKIYRSGE-- 352

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
                               KP  VTY+T I GLCK G V+ A  L   +   N   +  
Sbjct: 353 --------------------KPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSH 392

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
           ++  VI GFC   +  EA ++  EM   G+ PDV ++S++++  C  G + K   L+E M
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
               + P+  +Y +LI G C  + + +A  +F S+ ++ C +D   Y TLI+ +C   D+
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           + A+ L  EM+   + PT  +  +L  G +++   ++AL++F+ M R+ +  DT   N  
Sbjct: 513 DSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYI 572

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +DG C++G+  EAL L    ++  + LN  SYN +I
Sbjct: 573 LDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAII 608



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 180/396 (45%), Gaps = 51/396 (12%)

Query: 78  GQGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
           G+GD+        +   D M  M  S   P + S+  L   L K       + +F  + +
Sbjct: 438 GKGDV--------MKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGA 489

Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
           +    D   +  LI+ FC  G +     +L  ++ +   P A +  SLI+G        +
Sbjct: 490 SSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQ 549

Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           A  +F         PD    N +++G CR G+   AL L E+      E G    P++  
Sbjct: 550 ALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ----EHGFNLNPHS-- 603

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           YN II  LCKEG+ ++A EL  +M   N+ P VV Y+++I GF   +++  A  LF  M+
Sbjct: 604 YNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMV 663

Query: 316 DQGVQPDVVTFSVIM--------------------------DEL---------CKNGKMD 340
             G+  ++ T++++M                          D++         C N +M 
Sbjct: 664 KVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMK 723

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           KA  L E M   G +PN  TY  +IDG+C +++ID A  +F  M  +  + DVV+Y  LI
Sbjct: 724 KAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLI 783

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
           +WY K+   ++A  LY  M  KG+ P  +T+N L L
Sbjct: 784 DWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGL 819



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 4/259 (1%)

Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
           V ++ +I        ++ A ++F   K   + PD+ T   +++    AN     +R+F E
Sbjct: 248 VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEE 307

Query: 314 MMDQGVQPDVVTFSVIMDELCK----NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           + D+G  P++ T++++M+  C     +  M +A+ +L  +   G  P   TY+T I G C
Sbjct: 308 LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC 367

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
               ++ A  L  ++       +  S+N +I  +CK  +V EAL +  EM S GI P V 
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVY 427

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           +Y+ L         V + L L +EM  + +     +Y + I GLCK   +  A+++F +I
Sbjct: 428 SYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487

Query: 490 RDSKYELNIVSYNCLIDGL 508
             S  + +   Y  LIDG 
Sbjct: 488 GASSCKYDSTVYETLIDGF 506



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 7/255 (2%)

Query: 260 IDGLCKEGFVDKAKELFLKMKD--ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
           I G C E   D   ELF    D  +++    V +  +I  F   +    A  +F      
Sbjct: 218 IVGFCNEAKYDTF-ELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHV 276

Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID-- 375
           G++PD+ T + ++  L +  +++   R+ E +  RG +PN YTY  +++ YC     D  
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336

Query: 376 --HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
              A  +   +  +G    VV+Y+T I+  CK  +VE AL L   +          ++N 
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
           +  G  +  +V  AL++ +EM+ + +  D Y+Y+  I+  C  G V++ L+L   +  S+
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 494 YELNIVSYNCLIDGL 508
            + +IVSY  LI GL
Sbjct: 457 IKPSIVSYTSLIHGL 471


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 209/421 (49%), Gaps = 23/421 (5%)

Query: 105 PPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF-CKMGRVSHGF 162
           PP ++F  ++F   +  +H++ V +  +     G  P  + ++ ++       G V    
Sbjct: 137 PPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLAL 196

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +  R++ +   PN  T+  LI GLC     ++A  LF +       P+V T+  L++ +
Sbjct: 197 ALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSM 256

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           C  G    A NL   M +        C P+ VTYN  + GLCK G VD+A E    ++  
Sbjct: 257 CNAGQLKEAENLLHSMEDKG------CPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHT 310

Query: 283 N-INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMD 340
                 +  Y+ +I G   A  + E  + ++E+++Q  V PD+V +++++    + G+ +
Sbjct: 311 GTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTN 370

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
            A    + M  +G  P+T+ YNTL+   C    +D AR L   M  N  + D+ +Y T+I
Sbjct: 371 DAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMI 430

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR----- 455
              CK + V+EA+ ++  M+  G  P+V+TYN L  GL+  H++E A  LF +M      
Sbjct: 431 IGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNP 490

Query: 456 ----RNHVAA----DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
               R  + A    D+ T    ++ +C+SG VL+A +L R I DS    ++V+YN L++G
Sbjct: 491 SLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNG 550

Query: 508 L 508
           L
Sbjct: 551 L 551



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 195/427 (45%), Gaps = 44/427 (10%)

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIK 185
            L+L+ R+ +AG  P+  T+++LI+  CK G       +   ++    TPN  T T L+ 
Sbjct: 195 ALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLS 254

Query: 186 GLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN----- 240
            +C   ++ EA  L        C PD  TYN  ++GLC+ G    A+   E + +     
Sbjct: 255 SMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFV 314

Query: 241 ----------------GNGEFGVVC----------KPNTVTYNTIIDGLCKEGFVDKAKE 274
                           G  E G  C           P+ V Y  +I G  + G  + A  
Sbjct: 315 LGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFA 374

Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
            F +MK++   PD   Y ++++  C A D + A+ L  EM+   V  D+ T++ ++  LC
Sbjct: 375 FFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLC 434

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME--------- 385
           K   +D+A ++ + M+  G +P+  TYN LIDG     +++ AR LF  ME         
Sbjct: 435 KEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFL 494

Query: 386 ----SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
                   + D  +   L+   C++  V +A  L   ++  G+ P VVTYNTL  GL ++
Sbjct: 495 RLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKV 554

Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
             ++ AL+LF E++      D  TY   ID L ++    +AL LF+ I  S    ++  Y
Sbjct: 555 RNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIY 614

Query: 502 NCLIDGL 508
           N ++  L
Sbjct: 615 NSMMRSL 621



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 182/372 (48%), Gaps = 24/372 (6%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP-DIYTHSILINCFCKMGRVSHGF 162
           PP   ++N     L K    D  +   + L   G F   +  +S LI+     GR   GF
Sbjct: 278 PPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGF 337

Query: 163 VVLGRILRSC-FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
                +L     +P+ V +T +I+G     R  +A A F + +     PD F YNTL+  
Sbjct: 338 QCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKA 397

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
           LC  G    A +L  EM   N    VV   +  TY T+I GLCKE  VD+A ++F  M +
Sbjct: 398 LCDAGDLDGARSLMSEMVRNN----VVL--DIHTYTTMIIGLCKEQLVDEAMQVFDGMVE 451

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP--------------DVVTFS 327
              +P V+TY  +I G   A+   EA+ LF +M + G  P              D  T  
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGANQVRDSETLQ 510

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +++ +C++G++ KA +LL  +I  GV P+  TYNTL++G C    +D A +LF  ++  
Sbjct: 511 KLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 570

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G   D ++Y TLI+   +     +AL+L+ ++L  G  P++  YN++   L  + ++ +A
Sbjct: 571 GFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQA 630

Query: 448 LKL-FDEMRRNH 458
           + L FD + R +
Sbjct: 631 INLWFDHLPRKY 642



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 162/359 (45%), Gaps = 16/359 (4%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  + I+    A+    +   + F  +   G  PD + ++ L+   C  G +     +
Sbjct: 351 PDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSL 410

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  ++R+    +  T+T++I GLC E  + EA  +F       C P V TYN LI+GL R
Sbjct: 411 MSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYR 470

Query: 225 TGHTIVALNLFEEMANGNGE-------FGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
                 A  LF +M  GN          G     ++ T   +++ +C+ G V KA +L  
Sbjct: 471 AHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLR 530

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
            + D  + PDVVTY +++ G C   + + A RLF E+  +G   D +T+  ++D L +  
Sbjct: 531 GIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAH 590

Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF---VSMESNGCMHDVV 394
           + + A  L + ++  G  P+   YN+++   C   K+  A  L+   +  + N    D V
Sbjct: 591 RYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEV 650

Query: 395 --SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
             S        C ++ V E + +  E  S    P    Y    +GL +  ++E ALK+F
Sbjct: 651 ISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCP----YTIWLIGLIQAGRIEDALKIF 705


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 6/401 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  F        K    +  + LF ++  AG+ P++ T++ +I+     GR    F+ 
Sbjct: 250 PDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMF 309

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     P  +T++ L+KGL    RI +A  +  +       P+V  YN LI+ L  
Sbjct: 310 KEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIE 369

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A+ + + M +            + TYNT+I G CK G  D A+ L  +M     
Sbjct: 370 AGSLNKAIEIKDLMVSKGLSL------TSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF 423

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           N +  ++TSVI   C  + ++ A R   EM+ + + P     + ++  LCK+GK  KA  
Sbjct: 424 NVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVE 483

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L    + +G   +T T N L+ G C   K++   ++   +   G + D VSYNTLI+  C
Sbjct: 484 LWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCC 543

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
            NK ++EA     EM+ KG+KP   TY+ L  GL  +++VE A++ + + +RN +  D Y
Sbjct: 544 GNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVY 603

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           TY+  IDG CK+    E  +LF  +  +  + N V YN LI
Sbjct: 604 TYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLI 644



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 201/432 (46%), Gaps = 29/432 (6%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++N +   L  +  YD      +++   G+ P + T+SIL+    K  R+   + V
Sbjct: 285 PNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCV 344

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  +    F PN + + +LI  L     + +A  +              TYNTLI G C+
Sbjct: 345 LKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 404

Query: 225 TGHTIVALNLFEEMAN-----GNGEF-GVVC-----------------------KPNTVT 255
           +G   +A  L +EM +       G F  V+C                        P    
Sbjct: 405 SGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGL 464

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
             T+I GLCK G   KA EL+LK  ++    D  T  +++ G C A    E  R+  E++
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
            +G   D V+++ ++   C N K+D+A   ++ M+ +G+ P+ YTY+ LI G    +K++
Sbjct: 525 GRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVE 584

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A + +   + NG + DV +Y+ +I+  CK +  EE   L+ EM+S  ++P  V YN L 
Sbjct: 585 EAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLI 644

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
                  ++  AL+L ++M+   ++ ++ TY + I G+     V EA  L   +R    E
Sbjct: 645 GAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLE 704

Query: 496 LNIVSYNCLIDG 507
            N+  Y  LIDG
Sbjct: 705 PNVFHYTALIDG 716



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 196/438 (44%), Gaps = 20/438 (4%)

Query: 69  FLKERCKSSGQGDINLITPNEALCI-FDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVL 127
            +K  CKS GQ DI      E L I F+             SF  +   L  +  +D+ L
Sbjct: 398 LIKGYCKS-GQADIAERLLKEMLSIGFNV---------NQGSFTSVICLLCSHHMFDSAL 447

Query: 128 SLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGL 187
                +    + P     + LI+  CK G+ S    +  + L   F  +  T  +L+ GL
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 188 CAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 247
           C   ++ E   +  +        D  +YNTLI+G C       A    +EM         
Sbjct: 508 CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG----- 562

Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
             KP+  TY+ +I GL     V++A + +   K   + PDV TY+ +I G C A    E 
Sbjct: 563 -LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEG 621

Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           ++LF EMM   +QP+ V ++ ++   C++G++  A  L E M  +G++PN+ TY +LI G
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 681

Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
             +  +++ A+ L   M   G   +V  Y  LI+ Y K   + +   L  EM SK + P 
Sbjct: 682 MSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 741

Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
            +TY  +  G      V  A +L  EMR   +  D+ TY  FI G  K G VL+A   F+
Sbjct: 742 KITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA---FK 798

Query: 488 AIRDSKYELNIVSYNCLI 505
              +  Y   I  +N LI
Sbjct: 799 GSDEENYAAIIEGWNKLI 816



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 198/420 (47%), Gaps = 7/420 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            +A C+   M      PP V  +N L   L +    +  + +   + S GL     T++ 
Sbjct: 339 GDAYCVLKEMTE-KGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 397

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI  +CK G+      +L  +L   F  N  +FTS+I  LC+      A     +  +  
Sbjct: 398 LIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRN 457

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             P      TLI+GLC+ G    A+ L+ +  N    F V    +T T N ++ GLC+ G
Sbjct: 458 MSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG--FLV----DTKTSNALLHGLCEAG 511

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +++   +  ++       D V+Y ++I G C     +EA     EM+ +G++PD  T+S
Sbjct: 512 KLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYS 571

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
           +++  L    K+++A +        G+ P+ YTY+ +IDG C  ++ +  +KLF  M SN
Sbjct: 572 ILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSN 631

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
               + V YN LI  YC++  +  AL L  +M  KGI P   TY +L  G+  I +VE A
Sbjct: 632 NLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 691

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
             L +EMR   +  + + Y   IDG  K G +++   L R +       N ++Y  +I G
Sbjct: 692 KLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 751



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 139/267 (52%), Gaps = 3/267 (1%)

Query: 245 FGVVCK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
           F VVCK   P+   + T I+  CK G V++A ELF KM++  + P+VVTY +VI G   +
Sbjct: 241 FHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMS 300

Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
             ++EA     +M+++GV+P ++T+S+++  L K  ++  A  +L+ M  +G  PN   Y
Sbjct: 301 GRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVY 360

Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
           N LID       ++ A ++   M S G      +YNTLI  YCK+   + A  L  EMLS
Sbjct: 361 NNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLS 420

Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
            G      ++ ++   L   H  + AL+   EM   +++         I GLCK G   +
Sbjct: 421 IGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 480

Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
           A+EL+    +  + ++  + N L+ GL
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGL 507


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 193/355 (54%), Gaps = 14/355 (3%)

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA--CEPDVFTY 215
           + H + VL R+    F+P+ VT+  LI  LC  SR M  AAL  K+++      P V TY
Sbjct: 105 IPHAYQVLDRMKNKGFSPDIVTYNILIGSLC--SRGMLHAALEFKNQLLKENFNPTVVTY 162

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
             LI      G    A+ L +EM      F +  +P+   YN+II  +C+EG+VD+A E+
Sbjct: 163 TILIEATLLQGGIDEAIKLLDEM------FEINLQPDVFPYNSIIX-MCREGYVDRAFEV 215

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
              +  +    DV+TY  ++R       W     L  +M+ +G + +VVT+SV++  LC+
Sbjct: 216 ISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCR 275

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
           +GK+++   LL+ M  +G+ P+ Y Y+ LI   C   ++D A ++   M S+GC+ D+V+
Sbjct: 276 DGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVN 335

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           YNT++   CK K  +EALS++ ++   G  P   +YNT+F  L       RAL +  EM 
Sbjct: 336 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEM- 394

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELF--RAIRDSKYELNIVSYNCLIDGL 508
            + V  D   YN+ I  LC+ G V EA+EL     +  S+ + ++VSYN ++ GL
Sbjct: 395 LDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGL 449



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 189/412 (45%), Gaps = 16/412 (3%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R+HPSP       I        +       +  R+ + G  PDI T++ILI   C  G +
Sbjct: 87  RLHPSP------QIPHPSAKPTESIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGML 140

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
                   ++L+  F P  VT+T LI+    +  I EA  L  +      +PDVF YN++
Sbjct: 141 HAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSI 200

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I  +CR G+   A  +   +++      V      +TYN ++  L  +G  +   EL   
Sbjct: 201 IX-MCREGYVDRAFEVISSISSKGYALDV------ITYNILLRSLXNQGKWEAGFELMSD 253

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M  +    +VVTY+ +I   C      E   L  +M  +G++PD   +  ++  LCK G+
Sbjct: 254 MVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGR 313

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           +D A  +L++MI  G  P+   YNT++   C   + D A  +F  +   GC  +  SYNT
Sbjct: 314 VDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNT 373

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD--EMRR 456
           + +    +     AL +  EML   + P V+ YN+L   L     V+ A++L    EM  
Sbjct: 374 VFSALGSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMES 432

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +       +YN  + GLC+ G V +A E+  A+ D     N  +Y  LI+G+
Sbjct: 433 SECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGI 484



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 11/311 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++NIL   L     ++    L   + + G   ++ T+S+LI+  C+ G+V  G  +L 
Sbjct: 228 VITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLK 287

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            + +    P+   +  LI  LC E R+  A  +        C PD+  YNT++  LC+  
Sbjct: 288 DMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQK 347

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               AL++FE++    GE G  C PN  +YNT+   L   G   +A  + L+M D  ++P
Sbjct: 348 RADEALSIFEKL----GEVG--CSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDP 400

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFI--EMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
           DV+ Y S+I   C     +EA  L +  EM     +P VV++++++  LC+ G++  A+ 
Sbjct: 401 DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATE 460

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           +L  M+ +G  PN  TY  LI+G      ++ AR L  ++ +   + +  S+  L   +C
Sbjct: 461 VLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISE-HSFERLYKTFC 519

Query: 405 KNKDVEEALSL 415
           K  DV   L+L
Sbjct: 520 K-LDVYRQLNL 529



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 17/334 (5%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           +EA+ + D M  ++  P      +I+  C  +  + D    +   ++S G   D+ T++I
Sbjct: 176 DEAIKLLDEMFEINLQPDVFPYNSIIXMC--REGYVDRAFEVISSISSKGYALDVITYNI 233

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+      G+   GF ++  ++      N VT++ LI  LC + ++ E   L    +   
Sbjct: 234 LLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKG 293

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            EPD + Y+ LI  LC+ G   +A+ + + M +        C P+ V YNTI+  LCK+ 
Sbjct: 294 LEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDG------CVPDIVNYNTILACLCKQK 347

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
             D+A  +F K+ +   +P+  +Y +V      +     A  + +EM+D  V PDV+ ++
Sbjct: 348 RADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPDVIAYN 406

Query: 328 VIMDELCKNGKMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
            ++  LC++G +D+A  LL  M        P+  +YN ++ G C   ++  A ++  +M 
Sbjct: 407 SLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMV 466

Query: 386 SNGCMHDVVSYNTLI------NWYCKNKDVEEAL 413
             GC+ +  +Y  LI       W    +D+   L
Sbjct: 467 DKGCLPNETTYTFLIEGIGFGGWLNDARDLATTL 500



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 13/279 (4%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++++L   L ++   +  + L K +   GL PD Y +  LI   CK GRV     VL 
Sbjct: 263 VVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLD 322

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++     P+ V + +++  LC + R  EA ++F K     C P+  +YNT+ + L  +G
Sbjct: 323 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSG 382

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN--I 284
           H + AL +  EM +          P+ + YN++I  LC++G VD+A EL + M+ E+   
Sbjct: 383 HKVRALGMILEMLD-------XVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSEC 435

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P VV+Y  V+ G C     ++A  +   M+D+G  P+  T++ +++ +   G ++ A  
Sbjct: 436 KPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARD 495

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           L   ++      + +++  L   +C   K+D  R+L +S
Sbjct: 496 LATTLVNMDA-ISEHSFERLYKTFC---KLDVYRQLNLS 530


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 193/404 (47%), Gaps = 7/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P +  +N+   C  K  + D     F  L S GL PD  +++ +I   CK GR+S    +
Sbjct: 250 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            G++      P A  + ++I G  +  +   A  L  + +   C P V ++N+++  L +
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK 369

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 AL LFE M           +PN+ TYN IID LC  G V++A  +  +M+   +
Sbjct: 370 KRKVDEALTLFEAMKKD-------AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGL 422

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+++T   ++   C A  +  A  +F     +G  P+ VT+  ++D L K G +D A R
Sbjct: 423 FPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYR 482

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L E M+  G N N   Y +LI  + +  + +   K+F  M   GC  D+   NT ++   
Sbjct: 483 LFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVF 542

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           K  DVE+  +++ ++   G  P V +Y+ L  GL +  Q      +F  M++   A D  
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDAR 602

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            YN  +DG CKSG + +A E+   ++  +    + +Y  +IDGL
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 207/439 (47%), Gaps = 41/439 (9%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P + + NI+   L K K ++    +F+  +  G  P+  T+  LI+   K G V   + +
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD------------- 211
              +L +    N V +TSLI+      R  +   +F +     C+PD             
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543

Query: 212 ----------------------VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
                                 V +Y+ LI+GL + G      ++F  M      F +  
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG--FAL-- 599

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
             +   YN ++DG CK G +DKA E+  +MK + + P V TY S+I G    +  +EA  
Sbjct: 600 --DARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYM 657

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
           LF E   +G++ +V+ +S ++D   K G++D+A  +LE M+ +G+ PN YT+N+L+D   
Sbjct: 658 LFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 717

Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
             ++I+ A   F SM+   C  +  +Y+ LIN  C+ +   +A   + EM  +G+ P VV
Sbjct: 718 KAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVV 777

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY T+  GL ++  +  A  LF+  + N    D  ++N  I+G+  +   +EA  +F   
Sbjct: 778 TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEET 837

Query: 490 RDSKYELNIVSYNCLIDGL 508
           R     +N+ +   L+D L
Sbjct: 838 RLKGCRINVKACISLLDAL 856



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 199/401 (49%), Gaps = 7/401 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V  F  L   LA+    +  L+L   +  + L PDI  +++ I+CF K G V   +    
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +      P+ V++TS+I  LC   R+ EA  LF +       P  + YNT+I G    G
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A  L +++     E G  C P+ V++N+I+  L K+  VD+A  LF  MK ++  P
Sbjct: 337 QFENAYKLLDQLK----ERG--CIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEP 389

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +  TY  +I   C A    EA  +  EM   G+ P+++T ++++D LCK  K + A  + 
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           E    RG NPN+ TY +LIDG      +D A +LF +M   G   + V Y +LI  +  +
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMH 509

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
              E+   ++ EM  +G +P +   NT    +F+   VE+   +F++++      D  +Y
Sbjct: 510 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 569

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           +  I GL K+G   E   +F A++   + L+  +YN ++DG
Sbjct: 570 SILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDG 610



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 187/389 (48%), Gaps = 7/389 (1%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++A  +F+ ML    +  PV   +++       +  D    +FK +N  G  PD+   + 
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG-HKIFKEMNRRGCQPDLTLLNT 536

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            ++C  K G V  G  +   I    F P+  +++ LI GL    +  E +++F   +   
Sbjct: 537 YMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG 596

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D   YN +++G C++G    A  + EEM            P   TY +IIDGL K  
Sbjct: 597 FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR------VPPTVATYGSIIDGLAKID 650

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            +D+A  LF + K + I  +V+ Y+S+I GF      +EA  +  EMM +G+ P+V T++
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
            +MD L K  ++++A    + M     +PNTYTY+ LI+G C   K + A   +  M+  
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770

Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
           G + +VV+Y T+I    K  ++ +A SL+    + G  P   ++N L  G+   ++   A
Sbjct: 771 GLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEA 830

Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
             +F+E R      +     + +D L K+
Sbjct: 831 YHVFEETRLKGCRINVKACISLLDALNKA 859



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 192/431 (44%), Gaps = 42/431 (9%)

Query: 113 LFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSC 172
           L   L + +  D    +   +      P    +++LI    +  +      +L ++    
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
           +      FT+L++ L  E R+  A AL  + +    EPD+  YN  I+   + G+  +A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
             F E+ +         KP+ V+Y ++I  LCK G + +A+ELF +M+ E   P    Y 
Sbjct: 273 KFFHELKSQG------LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           ++I G+  A  +  A +L  ++ ++G  P VV+F+ I+  L K  K+D+A  L E M  +
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KK 385

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
              PN+ TYN +ID  C+  K++ A  +   ME  G   ++++ N +++  CK K  E A
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPA 445

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD-------------------- 452
             ++     +G  P  VTY +L  GL +   V+ A +LF+                    
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRN 505

Query: 453 ---------------EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
                          EM R     D    N ++D + K+G V +   +F  I+   +  +
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565

Query: 498 IVSYNCLIDGL 508
           + SY+ LI GL
Sbjct: 566 VRSYSILIHGL 576



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 163/356 (45%), Gaps = 13/356 (3%)

Query: 158 VSHGFVVLGRILRSCFT-----PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
           +SH    + ++L          PN      L+  L    R+ +A  +    R     P  
Sbjct: 124 LSHDLAAMEKVLEEMSVLGYGVPNPAC-ADLVSALVRTRRLDDAERVIAAMRRLKFRPAF 182

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
             Y  LI  +        AL L  +M     E GV        + T++  L +EG V+ A
Sbjct: 183 SAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPL------FTTLVRALAREGRVEGA 236

Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
             L  ++K   + PD+V Y   I  F  A + + A + F E+  QG++PD V+++ ++  
Sbjct: 237 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWV 296

Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           LCK G++ +A  L   M      P  Y YNT+I GY    + ++A KL   ++  GC+  
Sbjct: 297 LCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPS 356

Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
           VVS+N+++    K + V+EAL+L+ E + K  +P   TYN +   L    +VE A  + D
Sbjct: 357 VVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRD 415

Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           EM    +  +  T N  +D LCK+     A E+F          N V+Y  LIDGL
Sbjct: 416 EMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 161/343 (46%), Gaps = 6/343 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P ++  N    C+ K    +   ++F+ +   G  PD+ ++SILI+   K G+      +
Sbjct: 529 PDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSI 588

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +  F  +A  + +++ G C   ++ +A  +  + +V    P V TY ++I+GL +
Sbjct: 589 FHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAK 648

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A  LFEE  +   E       N + Y+++IDG  K G +D+A  +  +M  + +
Sbjct: 649 IDRLDEAYMLFEEAKSKGIEL------NVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+V T+ S++     A + NEA   F  M +    P+  T+S++++ LC+  K +KA  
Sbjct: 703 TPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 762

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + M  +G+ PN  TY T+I G      I  A  LF   ++NG   D  S+N LI    
Sbjct: 763 FWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMS 822

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
                 EA  ++ E   KG +  V    +L   L +   +E+A
Sbjct: 823 HANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 125/246 (50%), Gaps = 6/246 (2%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +++   PP V+++  +   LAK    D    LF+   S G+  ++  +S LI+ F K+GR
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686

Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
           +   +++L  +++   TPN  T+ SL+  L     I EA   F   +   C P+ +TY+ 
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746

Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
           LINGLCR      A   ++EM       G+V  PN VTY T+I GL K G +  A  LF 
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQ----GLV--PNVVTYTTMIAGLAKVGNITDACSLFE 800

Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
           + K     PD  ++ ++I G  +AN   EA  +F E   +G + +V     ++D L K  
Sbjct: 801 RFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAE 860

Query: 338 KMDKAS 343
            +++A+
Sbjct: 861 CLEQAA 866


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 200/419 (47%), Gaps = 18/419 (4%)

Query: 98  LRMHPSPPPVSSFNILF-------GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
           LR H  P  V + N +        GC A   H         R  + G+ PD  +   L+ 
Sbjct: 134 LRSHGLPLVVETANWVLRVGLRHPGCFA---HAREAFDGMAR-AAGGVRPDHRSFRALVL 189

Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
             C+ GR      +L  +    F  ++ T T +++  C + R      LF +       P
Sbjct: 190 GCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPP 249

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           ++  Y+  I+GLC  G+   A ++ EEM  G G      KPN  T+ ++IDGLCK G+++
Sbjct: 250 NMVNYSAWIDGLCERGYVKQAFHVLEEMV-GKG-----LKPNVYTHTSLIDGLCKIGWME 303

Query: 271 KAKELFLKM-KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
           +A  LFLK+ K  +  P+V TYT +I G+C       A+ L   M++QG+ P+  T++ +
Sbjct: 304 RAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTL 363

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G  D+A  L+  M   G  PN YTYN +I G+C   KI  A K+     S G 
Sbjct: 364 IHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGL 423

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
             D V+Y  LI  +CK   +  AL L+ +M  K   P + TY T+     +  Q+E++ +
Sbjct: 424 HLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQ 483

Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LFD+     +     TY + I G C+ G +  AL++F  +       + ++Y  LI  L
Sbjct: 484 LFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSL 542



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 203/400 (50%), Gaps = 8/400 (2%)

Query: 94  FDYMLRMHPS-PPPVSSFNIL-FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           FD M R      P   SF  L  GC  + + ++   +L   + + G   D  T ++++  
Sbjct: 167 FDGMARAAGGVRPDHRSFRALVLGCCREGR-FEEADALLAAMWAQGFCLDSATCTVVVRA 225

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           FC+ GR  +   +  R+      PN V +++ I GLC    + +A  +  +      +P+
Sbjct: 226 FCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPN 285

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V+T+ +LI+GLC+ G    A  LF ++   +       KPN  TY  +I G CKEG + +
Sbjct: 286 VYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSY-----KPNVHTYTVMIGGYCKEGKLAR 340

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
           A+ L  +M ++ + P+  TYT++I G C    ++ A  L  +M  +G  P++ T++ I+ 
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400

Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
             CK GK+ +A ++L +   +G++ +  TY  LI  +C    I  A  LF  M    C  
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460

Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
           D+ +Y T+I  YC+ + +E++  L+ + LS G+ PT  TY ++  G   + ++  ALK+F
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVF 520

Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
           + M ++    D+ TY   I  LCK   + EA  LF  + D
Sbjct: 521 ERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLD 560



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 192/424 (45%), Gaps = 45/424 (10%)

Query: 119 KNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAV 178
           +   +  V  LF+R++  G  P++  +S  I+  C+ G V   F VL  ++     PN  
Sbjct: 228 RQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVY 287

Query: 179 TFTSLIKGLCAESRIMEAAALFTKH-RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           T TSLI GLC    +  A  LF K  +  + +P+V TY  +I G C+ G    A  L   
Sbjct: 288 THTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 347

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M     E G+   PNT TY T+I G CK G  D+A EL  KMK E   P++ TY ++I G
Sbjct: 348 MV----EQGLA--PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGG 401

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           FC      EA ++      QG+  D VT+++++ E CK G +  A  L + M  +  +P+
Sbjct: 402 FCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPD 461

Query: 358 TYTYNT-----------------------------------LIDGYCLTDKIDHARKLFV 382
            +TY T                                   +I GYC   K+  A K+F 
Sbjct: 462 IHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFE 521

Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
            M  +GC+ D ++Y  LI+  CK   +EEA +L+  ML K + P  VT  TL        
Sbjct: 522 RMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRD 581

Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
           ++  A+   D + +   A   +T +  +  L   G +  A    + + D  Y ++  +Y 
Sbjct: 582 KITIAVSFLDRLDKRQQA---HTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYT 638

Query: 503 CLID 506
             I+
Sbjct: 639 SFIN 642



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 6/287 (2%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
             A  +F  +++     P V ++ ++ G   K         L  R+   GL P+  T++ 
Sbjct: 303 ERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 362

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           LI+  CK G     F ++ ++    F PN  T+ ++I G C + +I EA  +        
Sbjct: 363 LIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQG 422

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
              D  TY  LI   C+ GH   AL+LF++MA  +      C P+  TY TII   C++ 
Sbjct: 423 LHLDKVTYTILITEHCKQGHITCALDLFKQMAEKS------CHPDIHTYTTIIAMYCQQR 476

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
            ++++++LF K     + P   TYTS+I G+C       A ++F  M+  G  PD +T+ 
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYG 536

Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
            ++  LCK  ++++A  L E M+ + + P   T  TL   YC  DKI
Sbjct: 537 ALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKI 583


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 180/365 (49%), Gaps = 8/365 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +N L     + ++ D V  L K + + G+ P + T++IL++   + G +S    V   + 
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
           R     +   ++++I   C    +  A+ +F +      EP+  TY  LING C+ G   
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 230 VALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
            A  L  +M   G G        N + +NT+IDG C+ G V+KA E+   M+   I  D+
Sbjct: 306 AAEMLLADMQLRGVGH-------NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDI 358

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY ++  G C  N   +AK+L   M ++GV P+ V+++ ++    K G M +A RL   
Sbjct: 359 YTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRD 418

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M  +G  P+  TYN +IDGY     I  A +    ME  G + D+ +Y  L++ +C N  
Sbjct: 419 MEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGK 478

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
           V+ AL L+ EM  +G KP VV Y  L  GL +  + E A +L+D+M    +  D   Y+ 
Sbjct: 479 VDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSV 538

Query: 469 FIDGL 473
            +  L
Sbjct: 539 LVGSL 543



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
           + S++++ FCK G V     +L  + R     NA  + SL+     +      A L  + 
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209

Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
                EP V TY  L++GL R G       +++EM   N         +   Y+ +I+  
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKN------VAGDVYFYSAVINAY 263

Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
           C+ G V +A E+F +     + P+  TY ++I GFC       A+ L  +M  +GV  + 
Sbjct: 264 CRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQ 323

Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
           + F+ ++D  C++G ++KA  +  +M   G+  + YTYNTL  G C  ++++ A+KL   
Sbjct: 324 IVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHI 383

Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
           M   G   + VSY TLI+ + K  D+ EA  L+ +M  KG +P+VVTYN +  G  +   
Sbjct: 384 MAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGS 443

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  A +   EM +  +  D YTY   + G C +G V  AL LF  ++    + N+V+Y  
Sbjct: 444 IREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTA 503

Query: 504 LIDGL 508
           L+ GL
Sbjct: 504 LVSGL 508



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 169/330 (51%), Gaps = 6/330 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V ++ IL   L++      V +++  +    +  D+Y +S +IN +C+ G V     V
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
               +     PN  T+ +LI G C   +I  A  L    ++     +   +NT+I+G CR
Sbjct: 276 FDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    AL +   M     E       +  TYNT+  GLC+   ++ AK+L   M ++ +
Sbjct: 336 HGMVEKALEIKAVMEKMGIEL------DIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            P+ V+YT++I       D  EA+RLF +M  +G +P VVT++V++D   KNG + +A R
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
             + M  +G+ P+ YTY  L+ G+C+  K+D A +LF  M+  G   +VV+Y  L++   
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           K    EEA  LY +ML+ G+ P    Y+ L
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 158/312 (50%), Gaps = 6/312 (1%)

Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
           P   T+T L+ GL     I +  A++ + +      DV+ Y+ +IN  CR G+   A  +
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           F+E   G+G      +PN  TY  +I+G CK G ++ A+ L   M+   +  + + + ++
Sbjct: 276 FDECV-GHG-----VEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I G+C      +A  +   M   G++ D+ T++ +   LC+  +M+ A +LL +M  +GV
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
            PN  +Y TLI  +     +  AR+LF  ME  G    VV+YN +I+ Y KN  + EA  
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
              EM  KG+ P + TY  L  G     +V+ AL+LF+EM+      +   Y   + GL 
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 475 KSGFVLEALELF 486
           K G   EA +L+
Sbjct: 510 KEGRSEEAFQLY 521



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 6/235 (2%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           FN +     ++   +  L +   +   G+  DIYT++ L    C++ R+     +L  + 
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
                PN V++T+LI     E  ++EA  LF         P V TYN +I+G  + G   
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
            A    +EM     + G+V  P+  TY  ++ G C  G VD A  LF +MK     P+VV
Sbjct: 446 EAERFKKEME----KKGLV--PDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVV 499

Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            YT+++ G        EA +L+ +M+  G+ PD   +SV++  L  + + D   R
Sbjct: 500 AYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V ++N++     KN          K +   GL PDIYT++ L++  C  G+V    
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +   +      PN V +T+L+ GL  E R  EA  L+         PD   Y+ L+  L
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 40/173 (23%)

Query: 337 GKMDKASRLLELMIWR---GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           G++  A+ LL   I      V P   + + ++DG+C +  +D A  L   +  +G   + 
Sbjct: 126 GQLPAAADLLGKAIASCPASVTP--LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
             YN+L++ Y + ++ +    L  EM ++G++PTV                         
Sbjct: 184 CCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTV------------------------- 218

Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
                      TY   +DGL ++G + +   ++  ++      ++  Y+ +I+
Sbjct: 219 ----------GTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVIN 261


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 168/333 (50%), Gaps = 4/333 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V S++     L K       + +F+ +   G  PD +T++ILIN  CK  ++  G  ++ 
Sbjct: 91  VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +    F+P  VT+T+LI G C   R+  A  +  +       P+  TY  LI GLC  G
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A+ + +EM     E    C PN VTY  +I GLC++G  +   E   +M      P
Sbjct: 211 EVERAILVLKEMKLRGNE----CCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFP 266

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           +  TYT++I G C    + EA  L  EM+  G + DVV ++ ++D LCK G++D A  + 
Sbjct: 267 NNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQ 326

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
            LM+ +GV P+ +TY +LI G C    +D A  L   M + G + + V+Y TLIN + + 
Sbjct: 327 ILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQA 386

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
              + AL L +EM S G+ P    Y  LF  L+
Sbjct: 387 DRTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 172/328 (52%), Gaps = 10/328 (3%)

Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           D+ ++S  IN  CK G+++    +   +      P++ T+  LI GLC ++++    +L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            + +     P V TY TLI+G C  G    A+++ +EM +     G+   PNTVTY  +I
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEH----RGIT--PNTVTYTALI 203

Query: 261 DGLCKEGFVDKAKELF--LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
            GLC  G V++A  +   +K++     P+VVTYT +I G C    +        EM+  G
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
             P+  T++ ++  LC+ G   +A+ LL  M+  G   +   YN+LIDG C   ++D AR
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
           ++ + M   G   DV +Y +LI   C    ++EAL L  EM +KGI P  VTY TL  G 
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383

Query: 439 FEIHQVERALKLFDEMRRNHV--AADTY 464
            +  + + AL+L +EM+ N +  A D Y
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIY 411



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 165/318 (51%), Gaps = 10/318 (3%)

Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
           + ++++  I GLC + +I EA  +F +       PD FTYN LINGLC+     + ++L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 236 EEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
           +EM A G         P  VTY T+I G C  G VD A ++  +M+   I P+ VTYT++
Sbjct: 150 DEMQARG-------FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTAL 202

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQ--PDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           I+G C   +   A  +  EM  +G +  P+VVT++ ++  LC+ G  +     L+ MI  
Sbjct: 203 IQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS 262

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G  PN  TY  LI G C       A  L   M + GC  DVV YN+LI+  CK  +++ A
Sbjct: 263 GCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFA 322

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             +   M+ KG+ P V TY +L  GL +   ++ AL L  EMR   +  ++ TY   I+G
Sbjct: 323 REMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLING 382

Query: 473 LCKSGFVLEALELFRAIR 490
             ++     AL+L   ++
Sbjct: 383 FTQADRTDHALQLVNEMK 400



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/304 (35%), Positives = 162/304 (53%), Gaps = 9/304 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ IF  M     S P   ++NIL   L K+   +  +SL   + + G  P + T++ L
Sbjct: 109 EAMEIFREM-EEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTL 167

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT--KHRVF 206
           I+ FC  GRV     +L  +     TPN VT+T+LI+GLC    +  A  +    K R  
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGN 227

Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
            C P+V TY  LI+GLC+ G   + +   +EM          C PN  TY  +I GLC++
Sbjct: 228 ECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG------CFPNNATYTALIHGLCQK 281

Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
           G   +A  L  +M       DVV Y S+I G C   + + A+ + I M+++GV PDV T+
Sbjct: 282 GSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTY 341

Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
           + ++  LC  G +D+A  L++ M  +G+ PN+ TY TLI+G+   D+ DHA +L   M+S
Sbjct: 342 TSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKS 401

Query: 387 NGCM 390
           NG M
Sbjct: 402 NGLM 405



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 160/299 (53%), Gaps = 8/299 (2%)

Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
           DV +Y+  INGLC+ G    A+ +F EM            P++ TYN +I+GLCK+  ++
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGS------APDSFTYNILINGLCKDAQLE 143

Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
               L  +M+    +P VVTYT++I GFC A   + A  +  EM  +G+ P+ VT++ ++
Sbjct: 144 MGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI 203

Query: 331 DELCKNGKMDKASRLLELMIWRGVN--PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
             LC  G++++A  +L+ M  RG    PN  TY  LI G C     +   +    M  +G
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
           C  +  +Y  LI+  C+     EA  L +EM++ G +  VV YN+L  GL ++ +++ A 
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323

Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           ++   M    VA D +TY + I GLC +G + EAL L + +R      N V+Y  LI+G
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLING 382



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 2/259 (0%)

Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
           + ++Y+  I+GLCK+G + +A E+F +M+++   PD  TY  +I G C          L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
            EM  +G  P VVT++ ++   C  G++D A  +L+ M  RG+ PNT TY  LI G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 372 DKIDHARKLFVSME--SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
            +++ A  +   M+   N C  +VV+Y  LI+  C+    E  +    EM+  G  P   
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
           TY  L  GL +      A  L +EM       D   YN+ IDGLCK G +  A E+   +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 490 RDSKYELNIVSYNCLIDGL 508
            +     ++ +Y  LI GL
Sbjct: 330 VEKGVAPDVFTYTSLIQGL 348



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%)

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           + + +  +L +Y   L       V++Y+    GL +  Q+  A+++F EM     A D++
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           TYN  I+GLCK   +   + L   ++   +   +V+Y  LI G
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHG 170



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query: 444 VERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNC 503
           +  +L+++     N    D  +Y+  I+GLCK G + EA+E+FR + +     +  +YN 
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 504 LIDGL 508
           LI+GL
Sbjct: 132 LINGL 136


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 202/417 (48%), Gaps = 17/417 (4%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           ML     PP   +F  L   L+K+          + +  AG+ PD+ T + LI  FCK  
Sbjct: 1   MLHSGTPPPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNR 60

Query: 157 RVSHGFVVLGRILRS--CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-FACEPDVF 213
            V   + +   +++S  C  P+   +  LI G C E R+  A  L  + RV    +PDV 
Sbjct: 61  MVERAWEIFQEMIKSNRC-QPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVV 119

Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
            YN++++GLCR+   + A    +E     G     C P  VTY ++I G CK   +  A 
Sbjct: 120 IYNSIVDGLCRSNRFLEAWKFLDETMVRQG-----CSPTVVTYTSLIRGACKAKKMKLAM 174

Query: 274 ELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
            ++  M +  I P +V+Y+ +I G   A    +A R+  EM   G + +VV ++ ++D L
Sbjct: 175 TIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGL 234

Query: 334 CKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDV 393
           CK+G +D A  L  +M   G  PN  TY TLID +C  D+ + A  LF  +  + C  DV
Sbjct: 235 CKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR-DYCPLDV 293

Query: 394 VSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
             Y  +++  C+ + +++A +L+ EM   G+      YN L  G F   + E A ++ +E
Sbjct: 294 AMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEE 353

Query: 454 MRRN-HVAADTYTYNNFIDGLC-KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  +    A+  TYN  I G C +SG V     LF  +R      +  +Y+ LID L
Sbjct: 354 LGDDPGCVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSALIDRL 405



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 19/327 (5%)

Query: 105 PPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P V  +N I+ G    N+  +    L + +   G  P + T++ LI   CK  ++     
Sbjct: 116 PDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMT 175

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           +   +L     P  V+++ +I GL    R+ +A  +  +     CE +V  Y TLI+GLC
Sbjct: 176 IWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLC 235

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           ++G    A  L+  M   +G F     PN  TY T+ID  C+    + A  LF  ++D  
Sbjct: 236 KSGFLDDAYALYRIMKR-SGAF-----PNQRTYATLIDTFCRNDRTETALGLFDHIRD-Y 288

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
              DV  YT+V+ G C     ++A+ LF EM   GV  D   ++V++    ++G+ ++A 
Sbjct: 289 CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAF 348

Query: 344 RLLELMIWRGVNP----NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
           R+LE +   G +P    N  TYNT+I G CL    +    LF  M   G   D  +Y+ L
Sbjct: 349 RILEEL---GDDPGCVANLLTYNTVIAGCCL----ESGMVLFYEMRQRGIAPDFATYSAL 401

Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKP 426
           I+    + ++  A  L  EML+ G+ P
Sbjct: 402 IDRLLGSGEIRRAFDLCEEMLASGLSP 428



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 12/242 (4%)

Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
           +  L   L K+   D   +L++ +  +G FP+  T++ LI+ FC+  R      +   I 
Sbjct: 227 YTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIR 286

Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
             C   +   +T+++ GLC E R+ +A ALF + R+     D   YN L++G  R+G + 
Sbjct: 287 DYC-PLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSE 345

Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE-GFVDKAKELFLKMKDENINPDV 288
            A  + EE+ +  G     C  N +TYNT+I G C E G V     LF +M+   I PD 
Sbjct: 346 EAFRILEELGDDPG-----CVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDF 395

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
            TY+++I     + +   A  L  EM+  G+ P       ++  LC + + D A++L+E+
Sbjct: 396 ATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEM 455

Query: 349 MI 350
            +
Sbjct: 456 AM 457



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 40/317 (12%)

Query: 97  MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           M+R   SP  V+  +++ G   K K     ++++  +    + P I ++S++I+   K G
Sbjct: 145 MVRQGCSPTVVTYTSLIRGA-CKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAG 203

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
           RV   + V+  +       N V +T+LI GLC    + +A AL+   +     P+  TY 
Sbjct: 204 RVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYA 263

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
           TLI+  CR   T  AL LF+ + +        C  +   Y  ++ GLC+E  +D A+ LF
Sbjct: 264 TLIDTFCRNDRTETALGLFDHIRD-------YCPLDVAMYTAVVSGLCRERRLDDARALF 316

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKR--------------------------- 309
            +M+   ++ D   Y  ++ G   +    EA R                           
Sbjct: 317 REMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCL 376

Query: 310 -----LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
                LF EM  +G+ PD  T+S ++D L  +G++ +A  L E M+  G++P +     +
Sbjct: 377 ESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRV 436

Query: 365 IDGYCLTDKIDHARKLF 381
           +   C + + D A KL 
Sbjct: 437 VARLCWSRRGDLAAKLI 453


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 225/456 (49%), Gaps = 44/456 (9%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA+ ++  M+    SP  V ++++L     K +  DTVL L   + + G+ P++Y+++I 
Sbjct: 189 EAMEVYKAMVEDGISPS-VRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTIC 247

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I    +  R    + +LG++  S   P+ VT T +I+ LC   R+ +A A+F K +    
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
           +PD  TY TL++    +G +   + ++  M A+G  +       N V+Y  ++D LC+ G
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYND-------NIVSYTAVVDALCQVG 360

Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---------------- 311
            VD+A  +F +MK++ ++P+  +Y S+I GF  A+ ++ A  LF                
Sbjct: 361 RVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 420

Query: 312 -------------------IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
                                M  +G+ PDV   + ++  L  +G++  A R+   +   
Sbjct: 421 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM 480

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           GV+P+T TY  +I       K D A   F  M  +GC+ DV++ N+LI+   K     EA
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
             L+ ++    I+PT  TYNTL  GL    +V+  ++L +EM R     +  TYN  +D 
Sbjct: 541 WQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDC 600

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           L K+G V  A+++  ++ +     ++ SYN ++ GL
Sbjct: 601 LSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGL 636



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 209/469 (44%), Gaps = 66/469 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V S+ I    L +   +D    +  ++  +G  PD+ TH+++I   C  GR+S    V
Sbjct: 239 PNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAV 298

Query: 165 LGRILRSCFTP-----------------------------------NAVTFTSLIKGLCA 189
             ++  S   P                                   N V++T+++  LC 
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQ 358

Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM----------- 238
             R+ EA A+F + +     P+ ++YN+LI+G  +      AL LF  M           
Sbjct: 359 VGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 418

Query: 239 ----ANGNGEFGVVCK--------------PNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
                N  G+ G   K              P+    N ++  L   G +  AK +F ++K
Sbjct: 419 HVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELK 478

Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
              ++PD +TYT +I+    A+  +EA   F +M++ G  PDV+  + ++D L K GK +
Sbjct: 479 AMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGN 538

Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
           +A +L   +    + P   TYNTL+ G     K+    +L   M       ++++YNT++
Sbjct: 539 EAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVL 598

Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
           +   KN +V  A+ +   M  KG  P + +YNT+  GL +  ++E A ++F +M++  +A
Sbjct: 599 DCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKK-ILA 657

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRA-IRDSKYELNIVSYNCLIDGL 508
            D  T    +    K+G + EAL   +  I  +   ++  S++ L++G+
Sbjct: 658 PDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGI 706



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 183/370 (49%), Gaps = 6/370 (1%)

Query: 108  SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
            SSF+ L   + K    +  +   + + S G+  + +    LI   CK  +      +  +
Sbjct: 697  SSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNK 756

Query: 168  ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
                  +    ++ SLI+GL  E+ I  A  LFT+ +   C PD FTYN +++ + ++  
Sbjct: 757  FKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMR 816

Query: 228  TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
                L + +EM     E         VTYNTII GL K   +++A +L+  +  E  +P 
Sbjct: 817  VEEMLKVQKEMHRKGYE------STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPT 870

Query: 288  VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
              TY  ++ G   +    +A+ LF EM++ G +P+   ++++++     G  +   +L E
Sbjct: 871  PCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFE 930

Query: 348  LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
             M+ +G+NP+  +Y  LID  C   +++     F  +   G   D++ YN LI+   K++
Sbjct: 931  KMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSE 990

Query: 408  DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
             +EEA+SL++EM  KGI P + TYN+L L L +  +   A ++++E+ R       +TYN
Sbjct: 991  RIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYN 1050

Query: 468  NFIDGLCKSG 477
              I G   SG
Sbjct: 1051 ALIRGYSVSG 1060



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 190/402 (47%), Gaps = 6/402 (1%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V +F  +FG +       +       +  AG+  + YT++ LI    K G  +    V  
Sbjct: 136 VGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYK 195

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            ++    +P+  T++ L+     +  +     L  +      +P+V++Y   I  L +  
Sbjct: 196 AMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAA 255

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
               A ++  +M +        CKP+ VT+  II  LC  G +  AK +F KMK  +  P
Sbjct: 256 RFDEAYHILGKMEDSG------CKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKP 309

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
           D VTY +++     + D      ++  M+  G   ++V+++ ++D LC+ G++D+A  + 
Sbjct: 310 DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVF 369

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
           + M  +G++P  Y+YN+LI G+   D  D A +LF  M + G   +  ++   IN+Y K+
Sbjct: 370 DEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 429

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
               +A+  Y  M SKGI P V   N +   L    ++  A ++F E++   V+ DT TY
Sbjct: 430 GQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITY 489

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I    K+    EA+  F  + +S    ++++ N LID L
Sbjct: 490 TMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTL 531



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 209/473 (44%), Gaps = 55/473 (11%)

Query: 83   NLITPNEAL----------CIFDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLF 130
            NLIT N  L          C  D +  M      P +SS+N +   L K +  +    +F
Sbjct: 590  NLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMF 649

Query: 131  KRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKG--- 186
             ++    L PD  T   ++  F K G +      V   IL++    +  +F SL++G   
Sbjct: 650  CQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILK 708

Query: 187  --------------------------------LCAESRIMEAAALFTKHRVFACEPDVFT 214
                                            LC   + +EA  LF K +         +
Sbjct: 709  KAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS 768

Query: 215  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKE 274
            YN+LI GL       +A +LF EM        + C P+  TYN I+D + K   V++  +
Sbjct: 769  YNSLIRGLVDENLIDIAEDLFTEMKR------LGCGPDEFTYNLILDAMGKSMRVEEMLK 822

Query: 275  LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
            +  +M  +      VTY ++I G   +    +A  L+  +M +G  P   T+  ++D L 
Sbjct: 823  VQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLL 882

Query: 335  KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
            K+GKM  A  L   M+  G  PN   YN L++G+ +    ++  +LF  M   G   D+ 
Sbjct: 883  KSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIK 942

Query: 395  SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            SY  LI+  C    + + L  + ++   G++P ++ YN L  GL +  ++E A+ LF+EM
Sbjct: 943  SYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002

Query: 455  RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            ++  +  + YTYN+ I  L K+G   EA +++  +    ++ ++ +YN LI G
Sbjct: 1003 KKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRG 1055



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 162/327 (49%), Gaps = 6/327 (1%)

Query: 108  SSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
             S+N L   L      D    LF  +   G  PD +T++++++   K  RV     V   
Sbjct: 767  GSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKE 826

Query: 168  ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
            + R  +    VT+ ++I GL    R+ +A  L+         P   TY  L++GL ++G 
Sbjct: 827  MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGK 886

Query: 228  TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             + A NLF EM     E+G  C+PN   YN +++G    G  +   +LF KM ++ INPD
Sbjct: 887  MVDAENLFNEML----EYG--CEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPD 940

Query: 288  VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
            + +YT +I   C A   N+    F ++ + G++PD++ +++++D L K+ ++++A  L  
Sbjct: 941  IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000

Query: 348  LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
             M  +G+ PN YTYN+LI       K   A +++  +   G    V +YN LI  Y  + 
Sbjct: 1001 EMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSG 1060

Query: 408  DVEEALSLYSEMLSKGIKPTVVTYNTL 434
              + A + Y +M+  G +P   TY  L
Sbjct: 1061 STDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 207/456 (45%), Gaps = 42/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           NEA  +F  +  M   P    ++N L   L +      V+ L + +      P++ T++ 
Sbjct: 538 NEAWQLFHKLKEMKIEPTN-GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +++C  K G V+    +L  +      P+  ++ +++ GL  E R+ EA  +F + +   
Sbjct: 597 VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKIL 656

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
             PD  T  T++    + G    AL+  +E     G     C  +  +++++++G+ K+ 
Sbjct: 657 A-PDYATLCTILPSFVKNGLMKEALHTVKEYILKAG-----CNVDKSSFHSLMEGILKKA 710

Query: 268 FVDK-----------------------------------AKELFLKMKDENINPDVVTYT 292
            V+K                                   A +LF K K   ++    +Y 
Sbjct: 711 GVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 770

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
           S+IRG    N  + A+ LF EM   G  PD  T+++I+D + K+ ++++  ++ + M  +
Sbjct: 771 SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRK 830

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
           G      TYNT+I G   + +++ A  L+ ++ S G      +Y  L++   K+  + +A
Sbjct: 831 GYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDA 890

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
            +L++EML  G +P    YN L  G       E   +LF++M    +  D  +Y   ID 
Sbjct: 891 ENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDT 950

Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           LC +G + + L  FR + +   E +++ YN LIDGL
Sbjct: 951 LCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 6/350 (1%)

Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
           GRV     V   + +     N  TF ++  G+  E  +  A       R      + +TY
Sbjct: 115 GRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTY 174

Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
           N LI  L ++G    A+ +++ M     E G+   P+  TY+ ++    K+  VD    L
Sbjct: 175 NGLIYFLVKSGFDAEAMEVYKAMV----EDGI--SPSVRTYSVLMVAFGKKRDVDTVLWL 228

Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
             +M+   + P+V +YT  IR    A  ++EA  +  +M D G +PDVVT +VI+  LC 
Sbjct: 229 LNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCD 288

Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
            G++  A  +   M      P+  TY TL+D    +       +++ +M ++G   ++VS
Sbjct: 289 AGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVS 348

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
           Y  +++  C+   V+EAL+++ EM  KG+ P   +YN+L  G  +    +RAL+LF+ M 
Sbjct: 349 YTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMN 408

Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
               + + YT+  FI+   KSG  L+A++ +  ++      ++ + N ++
Sbjct: 409 ACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVL 458



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 7/231 (3%)

Query: 103  SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
            SP P +   +L G L   K  D   +LF  +   G  P+   ++IL+N     G   +  
Sbjct: 868  SPTPCTYGPLLDGLLKSGKMVDAE-NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVC 926

Query: 163  VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
             +  +++     P+  ++T LI  LC   R+ +    F +      EPD+  YN LI+GL
Sbjct: 927  QLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986

Query: 223  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
             ++     A++LF EM     + G++  PN  TYN++I  L K G   +A +++ ++  +
Sbjct: 987  GKSERIEEAVSLFNEMK----KKGII--PNLYTYNSLILHLGKAGKAAEAAQMYEELLRK 1040

Query: 283  NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDEL 333
               P V TY ++IRG+  +   + A   + +M+  G QP+  T+  + ++L
Sbjct: 1041 GWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 116/256 (45%)

Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
           T + N +++ +   G V    ++F  M+ + +  +V T+ ++  G         A     
Sbjct: 101 TESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALP 160

Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
            M + G+  +  T++ ++  L K+G   +A  + + M+  G++P+  TY+ L+  +    
Sbjct: 161 VMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKR 220

Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
            +D    L   ME+ G   +V SY   I    +    +EA  +  +M   G KP VVT+ 
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280

Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
            +   L +  ++  A  +F +M+ +    D  TY   +D    SG     +E++ A+   
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD 340

Query: 493 KYELNIVSYNCLIDGL 508
            Y  NIVSY  ++D L
Sbjct: 341 GYNDNIVSYTAVVDAL 356



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 1/135 (0%)

Query: 88   NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
            N+ LC F  +  +   P  +  +N+L   L K++  +  +SLF  +   G+ P++YT++ 
Sbjct: 958  NDGLCYFRQLHELGLEPDLIV-YNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNS 1016

Query: 148  LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
            LI    K G+ +    +   +LR  + P+  T+ +LI+G         A A + +  V  
Sbjct: 1017 LILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGG 1076

Query: 208  CEPDVFTYNTLINGL 222
            C+P+  TY  L N L
Sbjct: 1077 CQPNSSTYMQLPNQL 1091


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 204/404 (50%), Gaps = 6/404 (1%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  ++ + +   L K    +    L  +L    + P+I+ ++ L+N  CK G  S    +
Sbjct: 300 PSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRL 359

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           +  +      PN VT+  LI  LC    + +A  +  + R       V+ YN+LIN  C+
Sbjct: 360 VNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCK 419

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                +A+    EM     E G+   PN  +Y+ +I GLC++G +  A EL  KM ++ +
Sbjct: 420 KDDLDMAMGFLSEMV----EIGLT--PNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGV 473

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             +  T+T++I GFC A   +EA RLF +M +  ++P+ VTF+ +++  C  G + KA +
Sbjct: 474 AWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQ 533

Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
           L + M+ RG+ P+ YTY +LI G CLTD    A++    +E+N  + +  S   L++ +C
Sbjct: 534 LYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFC 593

Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
           +   + EA  +++EM   G K  ++++  +     + H  E++  LF EM+   V  D  
Sbjct: 594 REGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNV 653

Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   I+   K G +++AL  +  +    +  N V+Y  L++ L
Sbjct: 654 FHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNL 697



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 198/409 (48%), Gaps = 8/409 (1%)

Query: 99  RMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
           RM      VS+  +N+L   L KN+     + +   + + G+  D  T   L+  FC+  
Sbjct: 222 RMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTE 281

Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
            +     + G + R  F P+    + ++ GL  + R+ EA  L  +       P++F YN
Sbjct: 282 ELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYN 341

Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
            L+N +C+ G    A  L  EM++   E      PN VTY  +I  LCK G +D A  + 
Sbjct: 342 ALLNNMCKNGMFSEADRLVNEMSDKGLE------PNEVTYAILIHSLCKRGMMDDALCML 395

Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            +M+++ +   V  Y S+I   C  +D + A     EM++ G+ P+  ++S ++  LC+ 
Sbjct: 396 DRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRK 455

Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
           G +  A  L   M  +GV  NTYT+  LI+G+C   K+D A +LF  M  +    + V++
Sbjct: 456 GDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTF 515

Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
           N +I  YC   D+ +A  LY +M+ +G+ P   TY +L  GL       +A +   ++  
Sbjct: 516 NAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLEN 575

Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           N    + ++    + G C+ G + EA  ++  +     +L+++S+  ++
Sbjct: 576 NCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIV 624



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 204/411 (49%), Gaps = 13/411 (3%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           +P   ++  ILF  L K + +     LF  +  +G+  D Y ++  I  +C++  +    
Sbjct: 159 APDQHTASQILFS-LVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            ++ R+       +AV +  LI GLC   R+ EA  +           D  T  TL+ G 
Sbjct: 218 GLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGF 277

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CRT    +AL +  +MA      G V  P+    + ++DGL K+G V++A  L  ++ + 
Sbjct: 278 CRTEELDMALEMTGDMA----RLGFV--PSEANCSFMLDGLRKKGRVEEAFRLACQLGEL 331

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
            + P++  Y +++   C    ++EA RL  EM D+G++P+ VT+++++  LCK G MD A
Sbjct: 332 RMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDA 391

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             +L+ M  +GV    Y YN+LI+  C  D +D A      M   G   +  SY+ +I  
Sbjct: 392 LCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAG 451

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C+  D+  A+ L+ +M  KG+     T+  L  G  +  +++ A +LF++M  +++  +
Sbjct: 452 LCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPN 511

Query: 463 TYTYNNFIDGLCKSGFVLEALELF-----RAIRDSKYEL-NIVSYNCLIDG 507
             T+N  I+G C  G + +A +L+     R +    Y   +++S  CL DG
Sbjct: 512 EVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDG 562



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 203/456 (44%), Gaps = 49/456 (10%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           ++ALC+ D M R       V  +N L  C  K    D  +     +   GL P+  ++S 
Sbjct: 389 DDALCMLDRM-REKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSP 447

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           +I   C+ G +S    +  ++       N  TFT+LI G C   ++ EA+ LF K     
Sbjct: 448 VIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESN 507

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PNTVTYNTIIDGLC 264
            EP+  T+N +I G C  G    A  L+++M         +C+   P+  TY ++I GLC
Sbjct: 508 LEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM---------MCRGLTPDNYTYRSLISGLC 558

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND-------WNEAKR-------- 309
                 KAKE    +++     +  + T+++ GFC           WNE           
Sbjct: 559 LTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLI 618

Query: 310 --------------------LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
                               LF EM ++GV+PD V  + +++   K G M +A    + M
Sbjct: 619 SFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEM 678

Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
           I  G  PNT TY  L++  C +  +  A  L   M ++  + +  ++N  ++++    ++
Sbjct: 679 IADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNL 738

Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
           E A  LY  ML +G    +V+ NTL  G  ++ Q++ A+ L      N    D  +Y+  
Sbjct: 739 ETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTV 797

Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           I  LCK G + EA+EL+  +     + +IV+YN LI
Sbjct: 798 IHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILI 833



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 194/438 (44%), Gaps = 77/438 (17%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P  +S++ +   L +       + L +++   G+  + YT + LIN FCK  ++     +
Sbjct: 440 PNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRL 499

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC- 223
             ++  S   PN VTF ++I+G C    I +A  L+ +       PD +TY +LI+GLC 
Sbjct: 500 FNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCL 559

Query: 224 ----------------------------------RTGHTIVALNLFEEMANGNGEFGVVC 249
                                             R G    A +++ EMA   G      
Sbjct: 560 TDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGG------ 613

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           K + +++  I+    K+   +K+  LF +MK++ + PD V +T +I  +    +  +A  
Sbjct: 614 KLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALN 673

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN------- 362
            + EM+  G  P+ VT++ +++ LCK+  +  A  L + M+     PN+YT+N       
Sbjct: 674 CWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFA 733

Query: 363 ---------------------------TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
                                      TLI G+C   +I  A  L      NG   D +S
Sbjct: 734 TEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCIS 793

Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH-QVERALKLFDEM 454
           Y+T+I+  CK  D+ EA+ L++EML KG+KP +V YN L +    IH + ++ L ++ +M
Sbjct: 794 YSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNIL-IRWCNIHGESDKCLGIYIDM 852

Query: 455 RRNHVAADTYTYNNFIDG 472
            +  V  + +T+     G
Sbjct: 853 VKKGVQPNWHTHRALFVG 870



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 7/265 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           SF I+     K    +    LF+ +   G+ PD   H+ +IN + K G +         +
Sbjct: 619 SFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEM 678

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           +     PN VT+T+L+  LC    +  A  L  +       P+ +T+N  ++     G+ 
Sbjct: 679 IADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNL 738

Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
             A +L+  M  G          N V+ NT+I G CK G + +A +L  +  +    PD 
Sbjct: 739 ETAKDLYFAMLQG-------FLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDC 791

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           ++Y++VI   C   D NEA  L+ EM+ +GV+PD+V +++++     +G+ DK   +   
Sbjct: 792 ISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYID 851

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDK 373
           M+ +GV PN +T+  L  G  L  K
Sbjct: 852 MVKKGVQPNWHTHRALFVGTSLMSK 876



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 92/194 (47%)

Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
           +  G+ PD  T S I+  L K  +   A  L + M+  GV  + Y Y   I  YC    +
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
           D A+ L   M+  G     V YN LI   CKN+ V EA+ + + ML++G+    VT  TL
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 435 FLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
             G     +++ AL++  +M R          +  +DGL K G V EA  L   + + + 
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 495 ELNIVSYNCLIDGL 508
             NI +YN L++ +
Sbjct: 334 VPNIFAYNALLNNM 347



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%)

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I PD  T + ++        +  A+ LF  M+  GV  D   ++  +   C+   +D A 
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
            L+  M   G   +   YN LI G C   ++  A  +  SM + G   D V+  TL+  +
Sbjct: 218 GLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGF 277

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           C+ ++++ AL +  +M   G  P+    + +  GL +  +VE A +L  ++    +  + 
Sbjct: 278 CRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNI 337

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + YN  ++ +CK+G   EA  L   + D   E N V+Y  LI  L
Sbjct: 338 FAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSL 382


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 201/414 (48%), Gaps = 18/414 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           E LCI + M            +N L   L        V ++   + S G+ PD+ T +IL
Sbjct: 140 EILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNIL 199

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I   CK  ++    +V+  +      P+  TFT+L++G   E  +  A  +  +     C
Sbjct: 200 IKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGC 259

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------CKPNTVTYNT 258
                T N L++G C+ G    AL+  +EM+N       +          C+P+  TYN 
Sbjct: 260 PVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNM 319

Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
           +ID LC  G + +A  L  +M+      +V+TY ++I GFC      EA+ +F +M  QG
Sbjct: 320 LIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQG 379

Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
           +  + VT++ ++D LCK+ ++ +A++L++ MI  G+ P+ +TYN+++  +C    I  A 
Sbjct: 380 LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAA 439

Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
            +  +M SNGC  D+V+Y TLI   CK   VE A  L   +  KG+  T   YN +   L
Sbjct: 440 DIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQAL 499

Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG--------FVLEALE 484
           F+  + + A++LF EM       D +TY     GL  SG        FV+E +E
Sbjct: 500 FKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIE 553



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 186/400 (46%), Gaps = 58/400 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P VS+FNIL   L K       + + + ++S GL PD  T + L+  F + G +   F V
Sbjct: 191 PDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRV 250

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA----------------LFTKHRVFAC 208
             ++L +      VT   L+ G C E RI EA +                L+ + +   C
Sbjct: 251 KEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGC 310

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +PD FTYN LI+ LC  G    AL L  EM          C  N +TYNT+IDG CK   
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISG------CARNVITYNTLIDGFCKNKK 364

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
           +++A+E+F +M+ + ++ + VTY ++I G C +    EA +L  +M+ +G++PD  T++ 
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C+ G + KA+ +++ M   G  P+  TY TLI G C   +++ A +L  S++  G
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKG 484

Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEM----------------------------- 419
            +    +YN +I    K K  +EA+ L+ EM                             
Sbjct: 485 MVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEA 544

Query: 420 -------LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
                  + KG  P   ++  L  GL  +   +  +KL D
Sbjct: 545 VDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVD 584



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 7/248 (2%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           V ++N L     KNK  +    +F ++   GL  +  T++ LI+  CK  RV     ++ 
Sbjct: 349 VITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMD 408

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
           +++     P+  T+ S++   C E  I +AA +        CEPD+ TY TLI GLC+ G
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
              VA  L   +       G+V  P+   YN +I  L K     +A  LF +M+++   P
Sbjct: 469 RVEVASRLLRSIQLK----GMVLTPHA--YNPVIQALFKRKRTKEAMRLFREMEEKGNTP 522

Query: 287 DVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
           D  TY  V RG   +     EA    IEM+++G  P+  +F ++ + LC     D   +L
Sbjct: 523 DAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKL 582

Query: 346 LELMIWRG 353
           ++L++ + 
Sbjct: 583 VDLVMEKA 590



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 151/348 (43%), Gaps = 57/348 (16%)

Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
           FT   L++ L R      AL L    A+    F    +PN+  Y  I+  L K G  +  
Sbjct: 52  FTPAQLLDTLRRQNDETAALRLLS-WASKQPNF----RPNSSIYEEILRKLGKVGSFNSM 106

Query: 273 KELFLKMK------------------------------------DENINPDVVTYTSVIR 296
           K++  +MK                                    +  +  D + Y  ++ 
Sbjct: 107 KDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLN 166

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
                N     + +   M+ +G++PDV TF++++  LCK  ++  A  ++E M   G+ P
Sbjct: 167 VLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVP 226

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS-- 414
           +  T+ TL+ G+     +D A ++   M   GC    V+ N L++ +CK   +EEALS  
Sbjct: 227 DEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFI 286

Query: 415 --------------LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
                         LY+EM +KG +P   TYN L   L    +++ AL L  EM  +  A
Sbjct: 287 DEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCA 346

Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +  TYN  IDG CK+  + EA E+F  +       N V+YN LIDGL
Sbjct: 347 RNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGL 394


>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
 gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
          Length = 448

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 200/406 (49%), Gaps = 10/406 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S+N+L   L K    D   ++   +   G  PD+ T  +L++ FC+M RV     +
Sbjct: 8   PDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCEL 67

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLC 223
              +  +      + + +++K L   S   +    F+   V     P V  Y T+++ L 
Sbjct: 68  FQELESNGVAVGMLAYNAILKALMC-SGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLI 126

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           +TG T  A  +  EM   +        P+ +TY  +I  LCK    D A ++F  M ++ 
Sbjct: 127 KTGKTREASEVVGEMIKKS-------VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+V  YTS++   C     + A RLF+EM+ +G  P   T+ +++  LC  G+   A 
Sbjct: 180 IVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAY 239

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS-MESNGCMHDVVSYNTLINW 402
            +   M  RG  P+  TY +LI G C+  +I  A+ LF   +E      D   YN LI  
Sbjct: 240 DIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEG 299

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C+   VEEAL + + M+ KG  PT+ TYN L +G F+ ++V++AL+LF  M     + +
Sbjct: 300 LCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPN 359

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           T  Y+ FIDGLCK G + EA E F+   +     + V+YN LI GL
Sbjct: 360 TMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGL 405



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 172/356 (48%), Gaps = 10/356 (2%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
           ++N +   L  +  +D            G  P +  +  +++C  K G+      V+G +
Sbjct: 82  AYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEM 141

Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
           ++    P+ +T+T+LI  LC  +R  +A  +F         P+V  Y +L+   CRT   
Sbjct: 142 IKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKL 200

Query: 229 IVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
             A  LF EM   G G       P+  TY  ++  LC  G    A ++   M+     PD
Sbjct: 201 DGAYRLFVEMIQRGYG-------PSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPD 253

Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMD-QGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
             TY S+I G C A    EAK LF E+++ +  Q D   ++V+++ LC+  K+++A  + 
Sbjct: 254 ENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVT 313

Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
             M+ +G  P   TYN LI G+   +++D A +LF +ME  G   + + Y+T I+  CK 
Sbjct: 314 AGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKV 373

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
             + EA   + + + +G  P  VTYN L  GLF  ++++ A +L+ EM      AD
Sbjct: 374 GKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIAD 429



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 146/293 (49%), Gaps = 5/293 (1%)

Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
           +  S P   ++  L   L K+   D  + +F  +    + P++  ++ L+   C+  ++ 
Sbjct: 142 IKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLD 201

Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
             + +   +++  + P+A T+  L++ LC   R   A  + +  R     PD  TY +LI
Sbjct: 202 GAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLI 261

Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
            G C  G    A  LF+E+  G        + +   YN +I+GLC+   V++A E+   M
Sbjct: 262 YGCCMAGRITEAKVLFKEVLEGEK-----AQLDAGIYNVLIEGLCRASKVEEALEVTAGM 316

Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
            D+   P + TY ++I GF  AN+ ++A +LF  M ++G  P+ + +S  +D LCK GK+
Sbjct: 317 VDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKI 376

Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
           ++A    +  + RG  P+  TYN LI G    +++D A +L+  M   G + D
Sbjct: 377 NEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIAD 429



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 147/322 (45%), Gaps = 8/322 (2%)

Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF 162
           S P V ++  +  CL K         +   +    + PD  T++ LI+  CK  R     
Sbjct: 111 SLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAM 169

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            V   ++     PN   +TSL+   C   ++  A  LF +       P   TY  L+  L
Sbjct: 170 KVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCL 229

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK-MKD 281
           C  G + +A ++   M +  G       P+  TY ++I G C  G + +AK LF + ++ 
Sbjct: 230 CNGGRSYLAYDIHSSMRS-RGHV-----PDENTYASLIYGCCMAGRITEAKVLFKEVLEG 283

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
           E    D   Y  +I G C A+   EA  +   M+D+G  P + T++ ++    K  ++DK
Sbjct: 284 EKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDK 343

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A +L   M  +G +PNT  Y+T IDG C   KI+ A + F      GC+ D V+YN LI 
Sbjct: 344 ALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIR 403

Query: 402 WYCKNKDVEEALSLYSEMLSKG 423
                  ++EA  LY EM  +G
Sbjct: 404 GLFGANRMDEAHRLYREMGERG 425



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 1/227 (0%)

Query: 279 MKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK 338
           M ++ + PD  +Y  ++RG    +  ++A+ +   M+ +G  PDVVT  +++D+ C+  +
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 339 MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNT 398
           + +   L + +   GV      YN ++     +   D   K       +G +  V++Y T
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
           +++   K     EA  +  EM+ K + P  +TY  L   L + ++ + A+K+FD M    
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179

Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
           +  +   Y + +   C++  +  A  LF  +    Y  +  +Y  L+
Sbjct: 180 IVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLL 226



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 4/160 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  +F  +L    +      +N+L   L +    +  L +   +   G  P + T++ L
Sbjct: 272 EAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNAL 331

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  F K   V     +   +    F+PN + +++ I GLC   +I EA   F +     C
Sbjct: 332 IMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGC 391

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
            PD  TYN LI GL        A  L+ EM    GE G +
Sbjct: 392 VPDNVTYNALIRGLFGANRMDEAHRLYREM----GERGYI 427



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%)

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
           ML  G+ P   +YN L  GL ++  V++A  +   M       D  T    +D  C+   
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           V E  ELF+ +  +   + +++YN ++  L
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKAL 90


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 195/395 (49%), Gaps = 11/395 (2%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R    PPP+S +N+LF C  K    D V+ L+K +  A + P  YT ++LI+  C+MG +
Sbjct: 110 RFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYL 169

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
            +   V  ++      PN  +   L++G C          L  + R     P+   YNT+
Sbjct: 170 ENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTV 229

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I+ LC  G T+ A  L E+M     E G+   P+ VT+N  I  LCK G + +A  +F  
Sbjct: 230 ISSLCGEGQTVEAEKLVEKMR----EVGL--SPDIVTFNCRIAALCKSGQILEASRIFRD 283

Query: 279 MK-DENIN---PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           M+ DE +    P+ VTY  ++ GFC    + EA+ +F + M       + ++++ M  L 
Sbjct: 284 MQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLSLRSYNIWMLGLV 342

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           ++GK+ +A  +L  M  + + PN Y+YN L+ G C       AR +   M  +G   D V
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y+TL++ YC+   + EA  +  EM+  G  P + T N L   L++  +   A  L   M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                  D  T N  I+GLCK+G + +A+E+   +
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 211/443 (47%), Gaps = 32/443 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M   +     + S+NI    L ++        +   +    + P++Y+++IL
Sbjct: 315 EARAIFDSM--KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNIL 372

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G  S    +LG +  S   P+ VT+++L+ G C   +I+EA  +  +     C
Sbjct: 373 VHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGC 432

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+++T N L++ L + G    A +L + M N  G +G+    + VT NT+I+GLCK G 
Sbjct: 433 FPNMYTCNILLHSLWKEGRASEAEDLLQ-MMNERG-YGL----DNVTCNTMINGLCKAGN 486

Query: 269 VDKAKEL------------------FLKMKDENIN-----PDVVTYTSVIRGFCYANDWN 305
           +DKA E+                  F+ + D   N     PD +TY ++I G C     +
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EAK+  +EM+ + + PD + F   +   CK GK+  A R+L+ M  +G N +  TYN+LI
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G    ++I     L   M+  G   +V +YN +I+   +   +++A  L  EML KGI 
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P + T+  L    F+      A +LF E+  +        Y+   + L   G  L+A EL
Sbjct: 667 PNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGETLKAKEL 725

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           F A  D    L    Y  LI+ L
Sbjct: 726 FEAALDRSLALKNFLYRDLIEKL 748



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 199/445 (44%), Gaps = 46/445 (10%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R   + P   ++N +   L           L +++   GL PDI T +  I   CK G+
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273

Query: 158 VSHGFVVLGRILRSCF--------TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +    +   RI R            PN VT+  +++G C+E    EA A+F   +  +  
Sbjct: 274 I----LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN-SET 328

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
             + +YN  + GL R+G  + A  +  EMA  N       KPN  +YN ++ GLCK G  
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKN------IKPNLYSYNILVHGLCKYGMF 382

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A+ +   M++  + PD VTY++++ G+C      EA  +  EM+  G  P++ T +++
Sbjct: 383 SDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNIL 442

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG- 388
           +  L K G+  +A  LL++M  RG   +  T NT+I+G C    +D A ++   M + G 
Sbjct: 443 LHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS 502

Query: 389 ----------------------CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                                 C+ D ++Y T+I   CK   V+EA     EM+ K + P
Sbjct: 503 ASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSP 562

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             + ++T      +  ++  A ++  EM +        TYN+ I GL     + E   L 
Sbjct: 563 DSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLM 622

Query: 487 RAIRDSKYELNIVSYN----CLIDG 507
             +++     N+ +YN    CL +G
Sbjct: 623 DEMKERGIFPNVYTYNNIISCLSEG 647



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDE--NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +++  L   G ++ A   F  ++D   +  P +  Y  + R     +  +    L+ +M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              V+P   TF++++  LC+ G ++ A  + + M  +G  PN ++   L+ GYC      
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           H   L   M S+G + + V+YNT+I+  C      EA  L  +M   G+ P +VT+N   
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAA----DTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L +  Q+  A ++F +M+ +        +T TYN  ++G C  G   EA  +F ++++
Sbjct: 266 AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN 325

Query: 492 SKYELNIVSYNCLIDGL 508
           S+  L++ SYN  + GL
Sbjct: 326 SE-TLSLRSYNIWMLGL 341



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 7/262 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  + G L K    D        +    L PD       I  +CK G++S  F V
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +     +  T+ SLI+GL +E++I E   L  + +     P+V+TYN +I+ L  
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM     + G+   PN  T+  +I    K      A+ELF ++     
Sbjct: 647 GGKLKDATCLLDEML----QKGI--SPNIYTFRILIGAFFKACDFGAAQELF-EIALSLC 699

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                 Y+ +        +  +AK LF   +D+ +      +  ++++LCK+GK+D AS 
Sbjct: 700 GHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASF 759

Query: 345 LLELMIWRGVNPNTYTYNTLID 366
           +L  M+ +  + +  ++  +ID
Sbjct: 760 ILHKMMDKQYSFDPASFMPVID 781



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 7/216 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N L   L        +  L   +   G+FP++YT++ +I+C  + G++     +L 
Sbjct: 599 LRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLD 658

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L+   +PN  TF  LI           A  LF +  +  C      Y+ + N L   G
Sbjct: 659 EMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGG 717

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            T+ A  LFE   + +             Y  +I+ LCK+G +D A  +  KM D+  + 
Sbjct: 718 ETLKAKELFEAALDRSLAL------KNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSF 771

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           D  ++  VI         + A      MM+   + D
Sbjct: 772 DPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
 gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
           function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
           thaliana]
 gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
 gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
 gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 23/447 (5%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L +F+   CK++          N A  I   +++ + +P     FN L  CL +N     
Sbjct: 262 LTRFISSLCKNA--------RANTAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMDISR 312

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL------RSCFTPNAVT 179
           +  L  +++   + PD+ T  ILIN  CK  RV     V  ++        +    +++ 
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           F +LI GLC   R+ EA  L  + ++   C P+  TYN LI+G CR G    A  +   M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KPN VT NTI+ G+C+   ++ A   F+ M+ E +  +VVTY ++I   
Sbjct: 433 KEDE------IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  ++  +A   + +M++ G  PD   +  ++  LC+  +   A R++E +   G + + 
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             YN LI  +C  +  +   ++   ME  G   D ++YNTLI+++ K+KD E    +  +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFIDGLCKSG 477
           M   G+ PTV TY  +      + +++ ALKLF +M   + V  +T  YN  I+   K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCL 504
              +AL L   ++      N+ +YN L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 219/466 (46%), Gaps = 52/466 (11%)

Query: 88  NEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNK--HYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  + D ML+     PP   + +I+   + K +    + +++L  R +S G+ P+   
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVW 261

Query: 145 HSILINCFCKMGRVSHGFVVLGRILR--------------SCF----------------- 173
            +  I+  CK  R +  + +L  +++              SC                  
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMD 321

Query: 174 ----TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF------ACEPDVFTYNTLINGLC 223
                P+ VT   LI  LC   R+ EA  +F + R          + D   +NTLI+GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A  L   M     +    C PN VTYN +IDG C+ G ++ AKE+  +MK++ 
Sbjct: 382 KVGRLKEAEELLVRM-----KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+VVT  +++ G C  +  N A   F++M  +GV+ +VVT+  ++   C    ++KA 
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
              E M+  G +P+   Y  LI G C   +   A ++   ++  G   D+++YN LI  +
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ-VERALKLFDEMRRNHVAAD 462
           C   + E+   + ++M  +G KP  +TYNTL +  F  H+  E   ++ ++MR + +   
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTL-ISFFGKHKDFESVERMMEQMREDGLDPT 615

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIR-DSKYELNIVSYNCLIDG 507
             TY   ID  C  G + EAL+LF+ +   SK   N V YN LI+ 
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 42/373 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    +T   +  R+    + P++ T + ++   C+   ++   V 
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +     N VT+ +LI   C+ S + +A   + K     C PD   Y  LI+GLC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ + E++  G          + + YN +I   C +   +K  E+   M+ E  
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSL------DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY ++I  F    D+   +R+  +M + G+ P V T+  ++D  C  G++D+A +
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637

Query: 345 LLELM-IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           L + M +   VNPNT  YN L                                   IN +
Sbjct: 638 LFKDMGLHSKVNPNTVIYNIL-----------------------------------INAF 662

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +  +ALSL  EM  K ++P V TYN LF  L E  Q E  LKL DEM       + 
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQ 722

Query: 464 YTYNNFIDGLCKS 476
            T    ++ L  S
Sbjct: 723 ITMEILMERLSGS 735



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 178/402 (44%), Gaps = 31/402 (7%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI---LRSCFTPNAVTF 180
           D +L L++      +   I    +LI  F +MG V+   +V  R+   +++    N V  
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVD 193

Query: 181 TSLIKGLCAES-----RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
             L  GL  ++      +++  ++F  +R+ A   D+  +      L      I  ++ F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITA---DIVLHEVWKERLLTEEKIIALISRF 250

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                     GV   PN+V     I  LCK    + A ++   +       +   + +++
Sbjct: 251 -------SSHGV--SPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-- 353
                  D +    L ++M +  ++PDVVT  ++++ LCK+ ++D+A  + E M  RG  
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKR 359

Query: 354 ------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-SNGCMHDVVSYNTLINWYCKN 406
                 +  ++  +NTLIDG C   ++  A +L V M+    C+ + V+YN LI+ YC+ 
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +E A  + S M    IKP VVT NT+  G+   H +  A+  F +M +  V  +  TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I   C    V +A+  +  + ++    +   Y  LI GL
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+  ++ ML    SP     + ++ G     + +D +  + ++L   G   D+  +++L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLKEGGFSLDLLAYNML 552

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC        + +L  + +    P+++T+ +LI              +  + R    
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P V TY  +I+  C  G    AL LF++M            PNTV YN +I+   K G 
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMG-----LHSKVNPNTVIYNILINAFSKLGN 667

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +A  L  +MK + + P+V TY ++ +            +L  EM++Q  +P+ +T  +
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727

Query: 329 IMDELCKNGKMDKASRLLE 347
           +M+ L  + ++ K  + ++
Sbjct: 728 LMERLSGSDELVKLRKFMQ 746



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 132/313 (42%), Gaps = 42/313 (13%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N + G + ++   +  +  F  +   G+  ++ T+  LI+  C +  V      
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +  +P+A  + +LI GLC   R  +A  +  K +      D+  YN LI   C 
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT-------------------------- 258
             +   A  ++E + +   E     KP+++TYNT                          
Sbjct: 559 KNN---AEKVYEMLTDMEKEGK---KPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612

Query: 259 ---------IIDGLCKEGFVDKAKELFLKMK-DENINPDVVTYTSVIRGFCYANDWNEAK 308
                    +ID  C  G +D+A +LF  M     +NP+ V Y  +I  F    ++ +A 
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM  + V+P+V T++ +   L +  + +   +L++ M+ +   PN  T   L++  
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732

Query: 369 CLTDKIDHARKLF 381
             +D++   RK  
Sbjct: 733 SGSDELVKLRKFM 745


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 189/372 (50%), Gaps = 40/372 (10%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS---HG 161
           P + +FNI+     K         + K +++ G+ P + T++ LI+ +CK G+V    H 
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245

Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
             +L  ++++  +P+ VTF  LI G C E  I  A  +F + R      +V TYN+L++G
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVC-------------------------------- 249
           LCR G    ++ L EEM     E G+ C                                
Sbjct: 306 LCREGKVEDSIKLVEEME----ELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRG 361

Query: 250 -KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
            KPN +TYNT++DG  + G + +A      M  + I+P+V TY  +I GF  + DW    
Sbjct: 362 MKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVS 421

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
            L  EM ++GV+ DVVT++V++  LC  G++ KA +LL+ M+  G+ P    YNT+I+G+
Sbjct: 422 GLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGF 481

Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
           C       A ++ + ME      +VV+YN  + ++CK   ++EA  + +EML KG+ P  
Sbjct: 482 CEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNR 541

Query: 429 VTYNTLFLGLFE 440
           +TY  +  G+ E
Sbjct: 542 ITYEIINSGMIE 553



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 201/407 (49%), Gaps = 9/407 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   S N L   L +    D     F+      + PD++T +I+I+ FCK G++     V
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIME---AAALFTKHRVFACEPDVFTYNTLING 221
              I      P+  T+ +LI G C   ++ +     AL  +       PDV T+N LING
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
            C+  +   A+ +F+EM     + G+    N VTYN+++ GLC+EG V+ + +L  +M++
Sbjct: 271 YCKEPNITAAIKVFQEMR----QQGI--PANVVTYNSLVSGLCREGKVEDSIKLVEEMEE 324

Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
             +   + T  SV+ GFC      EA+     +  +G++P+V+T++ ++D   + GKM +
Sbjct: 325 LGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKE 384

Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
           A+   + M  +G++PN  TYN LI G+  +        L   M+  G   DVV+YN LI 
Sbjct: 385 AAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIG 444

Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
             C   +V +A+ L  EM+  G++P  V YNT+  G  E    + A ++   M +    A
Sbjct: 445 ALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRA 504

Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           +  TYN F+   CK G + EA  +   + +     N ++Y  +  G+
Sbjct: 505 NVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGM 551



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 141/331 (42%), Gaps = 73/331 (22%)

Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
           +P+  + N ++  L +   VD A   F       ++PD+ T+  VI GFC      +A  
Sbjct: 150 RPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGD 209

Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK---ASRLLELMIWRGVNPNTYTYNTLID 366
           +   +   GV P V T++ ++D  CK G++ K      LL+ MI  G++P+  T+N LI+
Sbjct: 210 VAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLIN 269

Query: 367 GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM------- 419
           GYC    I  A K+F  M   G   +VV+YN+L++  C+   VE+++ L  EM       
Sbjct: 270 GYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLAC 329

Query: 420 ----------------------------LSKGIKPTVVTYNTLFLGL------------- 438
                                         +G+KP V+TYNTL  G              
Sbjct: 330 ILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAK 389

Query: 439 ---------------------FEIHQVERALK-LFDEMRRNHVAADTYTYNNFIDGLCKS 476
                                F   +  R++  L DEM+   V AD  TYN  I  LC  
Sbjct: 390 DAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCK 449

Query: 477 GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G V +A++L   + +   E   V+YN +I+G
Sbjct: 450 GEVRKAVKLLDEMVEVGLEPKHVAYNTIING 480



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 9/283 (3%)

Query: 87  PN--EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
           PN   A+ +F  M R    P  V ++N L   L +    +  + L + +   GL   + T
Sbjct: 275 PNITAAIKVFQEM-RQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILST 333

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            + ++N FCK G +      +  I +    PN +T+ +L+ G     ++ EAAA      
Sbjct: 334 MNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMA 393

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
                P+V TYN LI G   +        L +EM     E GV  K + VTYN +I  LC
Sbjct: 394 GKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMK----EKGV--KADVVTYNVLIGALC 447

Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
            +G V KA +L  +M +  + P  V Y ++I GFC   D   A  + + M  +  + +VV
Sbjct: 448 CKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVV 507

Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
           T++V +   CK GKMD+A+ +L  M+ +G+ PN  TY  +  G
Sbjct: 508 TYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG 550


>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 766

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 218/447 (48%), Gaps = 23/447 (5%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L +F+   CK++          N A  I   +++ + +P     FN L  CL +N +   
Sbjct: 262 LTRFISSLCKNA--------RTNAAWDILSDLMK-NKAPLEAPPFNALLSCLGRNMNIGR 312

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL------RSCFTPNAVT 179
           + +L  +++   + PD+ T  ILIN  CK  RV     V  ++        +    +++ 
Sbjct: 313 MNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIH 372

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           F +LI GLC   R+ EA  L  + ++   C P+  TYN LI+G CR G     L   +E+
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGK----LETAKEV 428

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
            +   E G+  KP+ VT NTI+ G+C+   ++ A   F+ M+ E +  +VVTY ++I   
Sbjct: 429 VSRMKEDGI--KPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHAC 486

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  ++  +A   F +M++ G  PD   +  ++  LC+  +   A R++E +   G + + 
Sbjct: 487 CSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDL 546

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             YN LI  +C  +  +   ++   ME  G   D ++YNTLI+++ K+KD E    +  +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQ 606

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFIDGLCKSG 477
           M    + PTV TY  +      + ++  ALKLF +M  R+ V  +T  YN  I+   K G
Sbjct: 607 MREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLG 666

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCL 504
              +AL L   ++      N+ +YN L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 216/461 (46%), Gaps = 42/461 (9%)

Query: 88  NEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNK--HYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  + D ML+     PP   + +I+   + K +    + ++ L  R +S G+ P+   
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIGLISRFSSHGVSPNSVW 261

Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
            +  I+  CK  R +  + +L  ++++     A  F +L+  L     I    AL  K  
Sbjct: 262 LTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNMNIGRMNALVLKMD 321

Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------------- 248
                PDV T   LIN LC++     AL +FE+M     + G V                
Sbjct: 322 EMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLC 381

Query: 249 --------------------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
                               C PNTVTYN +IDG C+ G ++ AKE+  +MK++ I PDV
Sbjct: 382 KVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDV 441

Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
           VT  +++ G C  +  N A   F++M  +GV+ +VVT+  ++   C    ++KA    + 
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDK 501

Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
           M+  G +P+   Y  LI G C   +   A ++   +   G   D+++YN LI  +C   +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNN 561

Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ-VERALKLFDEMRRNHVAADTYTYN 467
            E+   + ++M  +G+KP  +TYNTL +  F  H+  E   ++ ++MR + +     TY 
Sbjct: 562 AEKVYEMLTDMEKEGMKPDSITYNTL-ISFFGKHKDFESVERMMEQMREDELDPTVATYG 620

Query: 468 NFIDGLCKSGFVLEALELFRAIR-DSKYELNIVSYNCLIDG 507
             I+  C  G + EAL+LF+ +   SK   N V YN LI+ 
Sbjct: 621 AVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINA 661



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 159/373 (42%), Gaps = 42/373 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    +T   +  R+   G+ PD+ T + ++   C+   ++   + 
Sbjct: 404 PNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLF 463

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +     N VT+ +LI   C+ S I +A   F K     C PD   Y  LI+GLC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQ 523

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ + E++  G          + + YN +I   C +   +K  E+   M+ E +
Sbjct: 524 VRRDHDAIRVVEKLREGGFSL------DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGM 577

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY ++I  F    D+   +R+  +M +  + P V T+  +++  C  G++ +A +
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALK 637

Query: 345 LLELMIWRG-VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           L + M  R  VNPNT  YN L                                   IN +
Sbjct: 638 LFKDMGLRSKVNPNTVIYNIL-----------------------------------INAF 662

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
            K  +  +ALSL  EM  K ++P V TYN LF  L E +Q E  LKL DEM       + 
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQ 722

Query: 464 YTYNNFIDGLCKS 476
            T    ++ L  S
Sbjct: 723 ITMEILMERLSGS 735



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 180/402 (44%), Gaps = 31/402 (7%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI---LRSCFTPNAVTF 180
           D +L L++      +   +    +LI  F +MG  +   +V  R+   +++    N V  
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATKLLIRWFGRMGMANQSVLVYERLDSNMKNSQVRNVVID 193

Query: 181 TSLIKGLCAES-----RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
             L  GL  ++      +++  ++F  +R+ A   D+  +      L      I  ++ F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITA---DIVLHEVWKGRLLTEEKIIGLISRF 250

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                     GV   PN+V     I  LCK    + A ++   +       +   + +++
Sbjct: 251 -------SSHGV--SPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALL 301

Query: 296 RGFCYANDWNEAK--RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG 353
              C   + N  +   L ++M +  ++PDVVT  ++++ LCK+ ++D+A ++ E M  + 
Sbjct: 302 S--CLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKR 359

Query: 354 ------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-SNGCMHDVVSYNTLINWYCKN 406
                 +  ++  +NTLIDG C   ++  A +L V M+    C+ + V+YN LI+ YC+ 
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRA 419

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +E A  + S M   GIKP VVT NT+  G+   H +  A+  F +M +  V  +  TY
Sbjct: 420 GKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTY 479

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I   C    + +A+  F  + ++    +   Y  LI GL
Sbjct: 480 MTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGL 521



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+  FD ML    SP     + ++ G     + +D +  + ++L   G   D+  +++L
Sbjct: 494 KAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLREGGFSLDLLAYNML 552

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC        + +L  + +    P+++T+ +LI              +  + R    
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDEL 612

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P V TY  +I   C  G    AL LF++M            PNTV YN +I+   K G 
Sbjct: 613 DPTVATYGAVIEAYCSVGELGEALKLFKDMG-----LRSKVNPNTVIYNILINAFSKLGN 667

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
             +A  L  +MK + + P+V TY ++ +     N      +L  EM++Q  +P+ +T  +
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEI 727

Query: 329 IMDELCKNGKMDKASRLLE 347
           +M+ L  + ++ K  + ++
Sbjct: 728 LMERLSGSDELVKLRKFMQ 746


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 211/454 (46%), Gaps = 42/454 (9%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           ALC+ + M R       V ++NI+   L + K       L KR+    L PD  T++ LI
Sbjct: 279 ALCVLEDMER-DSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLI 337

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           N F + G+++H   V   +LR    P+  T+T++I G C   RI +A ++ ++ ++    
Sbjct: 338 NGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVM 397

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
           P   TY+ L+NG C+      A+ L E++ +     G+    N      +IDG C+ G +
Sbjct: 398 PSELTYSALLNGYCKVSMLGPAIYLMEDLKSR----GITI--NKTMRTILIDGFCQVGEI 451

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
            KAK++   M ++ I+PDV+TY+++I G C     +E K +   M   G+ P+ V ++ +
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 511

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
           +   CK G + +A +    +  RG+  N   +N L+  +     I  A      M     
Sbjct: 512 ICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNI 571

Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY------------------ 431
             D VS+N +I+ YC   ++  A S+Y +M+  G  P V TY                  
Sbjct: 572 SFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQ 631

Query: 432 -----------------NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
                            N L LG+     ++ AL L ++M +N+   D +TY   + G C
Sbjct: 632 FMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFC 691

Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
           + G +L AL + + + +     + V+Y CL++GL
Sbjct: 692 RKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 197/405 (48%), Gaps = 7/405 (1%)

Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
           P  V++ NIL   L  N  +     + +++ S  +   + T++ +++ + K GR      
Sbjct: 223 PLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALC 281

Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
           VL  + R     +  T+  +I  LC   R   A  L  + R     PD  TYNTLING  
Sbjct: 282 VLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFF 341

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           R G    A  +F  M   N        P+  TY T+IDG C+   +DKA  +  +M+   
Sbjct: 342 REGKINHARYVFNHMLRQN------LVPSVATYTTMIDGYCRNRRIDKALSILSEMQITG 395

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           + P  +TY++++ G+C  +    A  L  ++  +G+  +    ++++D  C+ G++ KA 
Sbjct: 396 VMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAK 455

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           ++L+ M   G++P+  TY+ LI+G C   K+   +++   M+ +G + + V Y TLI +Y
Sbjct: 456 QILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYY 515

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
           CK   V+EAL  + ++  +G+    V +N L    +    +  A      M R +++ D+
Sbjct: 516 CKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDS 575

Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            ++N  ID  C  G ++ A  ++  +    Y  N+ +Y  L+ GL
Sbjct: 576 VSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGL 620



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 197/403 (48%), Gaps = 11/403 (2%)

Query: 109  SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
            +FN L   + +    D  L L +++      PDI+T++IL++ FC+ G++    V+L  +
Sbjct: 647  TFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMM 706

Query: 169  LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE---PDVFTYNTLINGLCRT 225
            L     P+ V +T L+ GL  E ++  A+ +F  H +   E    D   YN+L+NG  ++
Sbjct: 707  LEKGVVPDTVAYTCLLNGLINEGQVKAASYVF--HEIICKEGLYADCIAYNSLMNGYLKS 764

Query: 226  GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
             +      +  +M            PN+ +YN ++ G  K G   K+  L+  M  + I 
Sbjct: 765  RNVNTIKRMMSDMYQNE------VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR 818

Query: 286  PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            PD VTY  +I G       + A +   +M+ +G+ PD + F +++    +  KM  A ++
Sbjct: 819  PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQV 878

Query: 346  LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
               M W  ++P++ T++ +I+G      +DH+ K+   M   G   +   Y  L+N  C+
Sbjct: 879  FNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCR 938

Query: 406  NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
              +++ A  L  EM + GI P  V  +++  GL    ++E A+ +F  M R+ +     T
Sbjct: 939  VGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVAT 998

Query: 466  YNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
            +   +  LCK   + +AL L R +   +  +++VSYN LI GL
Sbjct: 999  FTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGL 1041



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 198/404 (49%), Gaps = 14/404 (3%)

Query: 106 PVSSFNILFGCL--AKNKHYDTVLSLFKRLNSAGLFP-DIYTHSILINCFCKMGRVSHGF 162
           PVS   IL   +   ++KH    + LF R + A  FP  + T +IL+N  C  G      
Sbjct: 191 PVSCNTILNALVEEGESKH----VWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAE 246

Query: 163 VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
            +L + ++SC   N+VT+ +++     + R   A  +       + + DV+TYN +I+ L
Sbjct: 247 DMLQK-MKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKL 305

Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
           CR   +  A  L + M   +        P+  TYNT+I+G  +EG ++ A+ +F  M  +
Sbjct: 306 CRIKRSTRAFLLLKRMRKDD------LTPDECTYNTLINGFFREGKINHARYVFNHMLRQ 359

Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
           N+ P V TYT++I G+C     ++A  +  EM   GV P  +T+S +++  CK   +  A
Sbjct: 360 NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPA 419

Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
             L+E +  RG+  N      LIDG+C   +I  A+++  SM  +G   DV++Y+ LIN 
Sbjct: 420 IYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALING 479

Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
            C+   + E   + S M   GI P  V Y TL     +   V+ ALK F ++ R  + A+
Sbjct: 480 MCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVAN 539

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
              +N  +    + G + EA    + +       + VS+N +ID
Sbjct: 540 PVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIID 583



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 206/456 (45%), Gaps = 43/456 (9%)

Query: 88  NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
           N A  +F++MLR +  P  V+++  +     +N+  D  LS+   +   G+ P   T+S 
Sbjct: 347 NHARYVFNHMLRQNLVPS-VATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSA 405

Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
           L+N +CK+  +     ++  +     T N    T LI G C    I +A  +        
Sbjct: 406 LLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465

Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
            +PDV TY+ LING+CR    +  ++  +E+ +   + G++  PN V Y T+I   CK G
Sbjct: 466 IDPDVITYSALINGMCR----MAKMHETKEILSRMQKSGIL--PNDVLYTTLICYYCKAG 519

Query: 268 FVDKAKELFLK-----------------------------------MKDENINPDVVTYT 292
           +V +A + F+                                    M   NI+ D V++ 
Sbjct: 520 YVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFN 579

Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
            +I  +C+  +   A  ++ +M+  G  P+V T+  ++  LC+ G + +A + +  ++  
Sbjct: 580 RIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDI 639

Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
               +  T+N L+ G C    +D A  L   M  N C+ D+ +Y  L++ +C+   +  A
Sbjct: 640 PFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPA 699

Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFID 471
           L +   ML KG+ P  V Y  L  GL    QV+ A  +F E+  +  + AD   YN+ ++
Sbjct: 700 LVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMN 759

Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
           G  KS  V     +   +  ++   N  SYN L+ G
Sbjct: 760 GYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHG 795



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 174/347 (50%), Gaps = 8/347 (2%)

Query: 109  SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
            ++N L     K+++ +T+  +   +    ++P+  +++IL++ + K G+ S    +   +
Sbjct: 753  AYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM 812

Query: 169  LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLCRTGH 227
            +R    P+ VT+  LI GL +E  +++ A  F +  V     PD   ++ LI        
Sbjct: 813  VRKGIRPDNVTYRLLILGL-SECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSK 871

Query: 228  TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
               AL +F  M        +   P++ T++ +I+GL ++G++D + ++  +M    + P+
Sbjct: 872  MHNALQVFNCMK------WLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPN 925

Query: 288  VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
               Y +++   C   + + A RL  EM   G+ P  V  S I+  LC+ GK+++A  +  
Sbjct: 926  HTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFS 985

Query: 348  LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
             M+  G+ P   T+ TL+   C   KI  A  L   ME      DVVSYN LI   CK+K
Sbjct: 986  SMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDK 1045

Query: 408  DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
             + +AL LY EM SKG+ P + TY TL   ++   +V+   +L +++
Sbjct: 1046 HISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDI 1092



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 6/323 (1%)

Query: 105  PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
            P  +S+NIL     K   +   L L+K +   G+ PD  T+ +LI    + G +      
Sbjct: 784  PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 843

Query: 165  LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
            L +++     P+ + F  LI     +S++  A  +F   +     P   T++ +INGL R
Sbjct: 844  LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIR 903

Query: 225  TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
             G+   +  +  EM        V  +PN   Y  +++  C+ G +D+A  L  +MK   I
Sbjct: 904  KGYLDHSHKVLHEM------LQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 957

Query: 285  NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
             P  V  +S+IRG C      EA  +F  MM  G+ P V TF+ +M  LCK  K+  A  
Sbjct: 958  VPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALH 1017

Query: 345  LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
            L  LM    +  +  +YN LI G C    I  A  L+  M+S G   ++ +Y TL     
Sbjct: 1018 LKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMY 1077

Query: 405  KNKDVEEALSLYSEMLSKGIKPT 427
                V+    L  ++  +G+ P 
Sbjct: 1078 STGRVQNGEELLEDIEERGLIPA 1100


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 195/395 (49%), Gaps = 11/395 (2%)

Query: 99  RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRV 158
           R    PPP+S +N+LF C  K    D V+ L+K +  A + P  YT ++LI+  C+MG +
Sbjct: 110 RFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYL 169

Query: 159 SHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTL 218
            +   V  ++      PN  +   L++G C          L  + R     P+   YNT+
Sbjct: 170 ENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTV 229

Query: 219 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLK 278
           I+ LC  G T+ A  L E+M     E G+   P+ VT+N  I  LCK G + +A  +F  
Sbjct: 230 ISSLCGEGQTVEAEKLVEKMR----EVGL--SPDIVTFNCRIAALCKSGQILEASRIFRD 283

Query: 279 MK-DENIN---PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
           M+ DE +    P+ VTY  ++ GFC    + EA+ +F + M       + ++++ M  L 
Sbjct: 284 MQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLSLRSYNIWMLGLV 342

Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
           ++GK+ +A  +L  M  + + PN Y+YN L+ G C       AR +   M  +G   D V
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
           +Y+TL++ YC+   + EA  +  EM+  G  P + T N L   L++  +   A  L   M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
                  D  T N  I+GLCK+G + +A+E+   +
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 211/443 (47%), Gaps = 32/443 (7%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           EA  IFD M   +     + S+NI    L ++        +   +    + P++Y+++IL
Sbjct: 315 EARAIFDSM--KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNIL 372

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           ++  CK G  S    +LG +  S   P+ VT+++L+ G C   +I+EA  +  +     C
Sbjct: 373 VHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGC 432

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
            P+++T N L++ L + G    A +L + M N  G +G+    + VT NT+I+GLCK G 
Sbjct: 433 FPNMYTCNILLHSLWKEGRASEAEDLLQ-MMNERG-YGL----DNVTCNTMINGLCKAGN 486

Query: 269 VDKAKEL------------------FLKMKDENIN-----PDVVTYTSVIRGFCYANDWN 305
           +DKA E+                  F+ + D   N     PD +TY ++I G C     +
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 306 EAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLI 365
           EAK+  +EM+ + + PD + F   +   CK GK+  A R+L+ M  +G N +  TYN+LI
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 366 DGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIK 425
            G    ++I     L   M+  G   +V +YN +I+   +   +++A  L  EML KGI 
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 426 PTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
           P + T+  L    F+      A +LF E+  +        Y+   + L   G  L+A EL
Sbjct: 667 PNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGETLKAKEL 725

Query: 486 FRAIRDSKYELNIVSYNCLIDGL 508
           F A  D    L    Y  LI+ L
Sbjct: 726 FEAALDRSLALKNFLYRDLIEKL 748



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 199/445 (44%), Gaps = 46/445 (10%)

Query: 98  LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
           +R   + P   ++N +   L           L +++   GL PDI T +  I   CK G+
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273

Query: 158 VSHGFVVLGRILRSCF--------TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
           +    +   RI R            PN VT+  +++G C+E    EA A+F   +  +  
Sbjct: 274 I----LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN-SET 328

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
             + +YN  + GL R+G  + A  +  EMA  N       KPN  +YN ++ GLCK G  
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKN------IKPNLYSYNILVHGLCKYGMF 382

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
             A+ +   M++  + PD VTY++++ G+C      EA  +  EM+  G  P++ T +++
Sbjct: 383 SDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNIL 442

Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG- 388
           +  L K G+  +A  LL++M  RG   +  T NT+I+G C    +D A ++   M + G 
Sbjct: 443 LHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS 502

Query: 389 ----------------------CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
                                 C+ D ++Y T+I   CK   V+EA     EM+ K + P
Sbjct: 503 ASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSP 562

Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
             + ++T      +  ++  A ++  EM +        TYN+ I GL     + E   L 
Sbjct: 563 DSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLM 622

Query: 487 RAIRDSKYELNIVSYN----CLIDG 507
             +++     N+ +YN    CL +G
Sbjct: 623 DEMKERGIFPNVYTYNNIISCLSEG 647



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 258 TIIDGLCKEGFVDKAKELFLKMKDE--NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           +++  L   G ++ A   F  ++D   +  P +  Y  + R     +  +    L+ +M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
              V+P   TF++++  LC+ G ++ A  + + M  +G  PN ++   L+ GYC      
Sbjct: 146 VARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
           H   L   M S+G + + V+YNT+I+  C      EA  L  +M   G+ P +VT+N   
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAA----DTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
             L +  Q+  A ++F +M+ +        +T TYN  ++G C  G   EA  +F ++++
Sbjct: 266 AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN 325

Query: 492 SKYELNIVSYNCLIDGL 508
           S+  L++ SYN  + GL
Sbjct: 326 SE-TLSLRSYNIWMLGL 341



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 7/262 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++  + G L K    D        +    L PD       I  +CK G++S  F V
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
           L  + +     +  T+ SLI+GL +E++I E   L  + +     P+V+TYN +I+ L  
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
            G    A  L +EM     + G+   PN  T+  +I    K      A+ELF ++     
Sbjct: 647 GGKLKDATCLLDEML----QKGI--SPNIYTFRILIGAFFKACDFGAAQELF-EIALSLC 699

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
                 Y+ +        +  +AK LF   +D+ +      +  ++++LCK+GK+D AS 
Sbjct: 700 GHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASF 759

Query: 345 LLELMIWRGVNPNTYTYNTLID 366
           +L  M+ +  + +  ++  +ID
Sbjct: 760 ILHKMMDKQYSFDPASFMPVID 781



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 7/216 (3%)

Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
           + ++N L   L        +  L   +   G+FP++YT++ +I+C  + G++     +L 
Sbjct: 599 LRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLD 658

Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
            +L+   +PN  TF  LI           A  LF +  +  C      Y+ + N L   G
Sbjct: 659 EMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGG 717

Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
            T+ A  LFE   + +             Y  +I+ LCK+G +D A  +  KM D+  + 
Sbjct: 718 ETLKAKELFEAALDRSLAL------KNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSF 771

Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPD 322
           D  ++  VI         + A      MM+   + D
Sbjct: 772 DPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 173/302 (57%), Gaps = 12/302 (3%)

Query: 177 AVTFTSLIKGLCAESRIMEAAALFTKHRVF-ACEPDVFTYNTLINGLCRTG-HTIVALNL 234
           A   T+ IKG+C    I  A     K  V    + D ++Y TLINGLC+ G  T  AL L
Sbjct: 104 APPLTTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAALQL 163

Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
             +            +P+ V Y T+ID +CK+ FV+ A +L+ +M    I+P+VVTYT++
Sbjct: 164 LRQ----------AFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTAL 213

Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
           I GFC      EA  LF +M+ + + P+V TF+ ++D  CK GK+++A  +L  M+ + +
Sbjct: 214 IDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDL 273

Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
             +   Y++L++GYCL +++  A+ +F +M      +DV SYN +IN +CK K V+EA+ 
Sbjct: 274 KSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIK 333

Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
           L+ EM  K I P VVTY+TL  GL +  ++  A++L DEM       +  TY   +D LC
Sbjct: 334 LFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLC 393

Query: 475 KS 476
           K+
Sbjct: 394 KN 395



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 192/373 (51%), Gaps = 40/373 (10%)

Query: 168 ILRSCFTPNAVTFTSLIKG-----------LCAESRIM------EAAALFTK------HR 204
           IL++ +  NA+TFT+L  G           +C    +       +   LFTK      +R
Sbjct: 28  ILKTGYDLNAITFTTLRGGAAYGPGWTTNEICGPKYMQMLEFEPQTPRLFTKKILIFINR 87

Query: 205 VF-------ACEPDVFT--YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
           V         C+  +      T I G+C+TG    ALN   ++    G F V    +  +
Sbjct: 88  VLLHSFVKIICQYYIIAPPLTTPIKGICQTGDIQRALNFHYKVVVARG-FDV----DHYS 142

Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
           Y T+I+GLCK G   +A    L++  +   PDVV YT+VI   C     N+A  L+ EM+
Sbjct: 143 YGTLINGLCKVGGDTRAA---LQLLRQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMV 199

Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
             G+ P+VVT++ ++D  C  GK+++A  L + MI   +NPN YT+N L+D +C   KI+
Sbjct: 200 ASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIE 259

Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
            A+ +  +M       DVV+Y++L+N YC   +V +A S++  M  + +   V +YN + 
Sbjct: 260 EAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMI 319

Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
               ++  V+ A+KLF+EM    +  D  TY+  IDGLCKSG +  A+EL   + D    
Sbjct: 320 NEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEP 379

Query: 496 LNIVSYNCLIDGL 508
            NI++Y  ++D L
Sbjct: 380 PNIITYCPIVDVL 392



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 164/291 (56%), Gaps = 16/291 (5%)

Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
           A N HY  V++        G   D Y++  LIN  CK+G  +   +   ++LR  F P+ 
Sbjct: 123 ALNFHYKVVVA-------RGFDVDHYSYGTLINGLCKVGGDTRAAL---QLLRQAFEPDV 172

Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           V +T++I  +C ++ + +A  L+ +       P+V TY  LI+G C  G    AL LF++
Sbjct: 173 VMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKK 232

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
           M + N        PN  T+N ++D  CKEG +++AK +   M ++++  DVV Y+S++ G
Sbjct: 233 MISEN------INPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNG 286

Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
           +C  N+  +A+ +F  M ++ +  DV +++++++E CK   +D+A +L E M  + + P+
Sbjct: 287 YCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPD 346

Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
             TY+TLIDG C + ++ +A +L   M+  G   ++++Y  +++  CKN D
Sbjct: 347 VVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHD 397



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 6/232 (2%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V  +  +   + K+   +    L+  + ++G+ P++ T++ LI+ FC +G++     +
Sbjct: 170 PDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGL 229

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             +++     PN  TF  L+   C E +I EA  +         + DV  Y++L+NG C 
Sbjct: 230 FKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCL 289

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A ++F+ MA     + V       +YN +I+  CK   VD+A +LF +M  + I
Sbjct: 290 VNEVFKAQSIFKTMAERELSYDV------RSYNIMINEFCKMKMVDEAIKLFEEMPLKQI 343

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
            PDVVTY ++I G C +   + A  L  EM D+G  P+++T+  I+D LCKN
Sbjct: 344 FPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 8/212 (3%)

Query: 94  FDYMLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
           FD    M  S   P V ++  L          +  L LFK++ S  + P++YT + L++ 
Sbjct: 192 FDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDA 251

Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
           FCK G++     VL  ++      + V ++SL+ G C  + + +A ++F          D
Sbjct: 252 FCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYD 311

Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
           V +YN +IN  C+      A+ LFEEM            P+ VTY+T+IDGLCK G +  
Sbjct: 312 VRSYNIMINEFCKMKMVDEAIKLFEEMPLKQ------IFPDVVTYHTLIDGLCKSGRLSY 365

Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
           A EL  +M D    P+++TY  ++   C  +D
Sbjct: 366 AMELVDEMDDRGEPPNIITYCPIVDVLCKNHD 397


>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
           protein-like proteins; contains similarity to Pfam
           family PF01535 (Domain of unknown function),
           score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
 gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 23/447 (5%)

Query: 66  LKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 125
           L +F+   CK++          N A  I   +++ + +P     FN L  CL +N     
Sbjct: 262 LTRFISSLCKNA--------RANTAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMDISR 312

Query: 126 VLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL------RSCFTPNAVT 179
           +  L  +++   + PD+ T  ILIN  CK  RV     V  ++        +    +++ 
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372

Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFA-CEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
           F +LI GLC   R+ EA  L  + ++   C P+  TYN LI+G CR G    A  +   M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432

Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
                      KPN VT NTI+ G+C+   ++ A   F+ M+ E +  +VVTY ++I   
Sbjct: 433 KEDE------IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486

Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
           C  ++  +A   + +M++ G  PD   +  ++  LC+  +   A R++E +   G + + 
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546

Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
             YN LI  +C  +  +   ++   ME  G   D ++YNTLI+++ K+KD E    +  +
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606

Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR-RNHVAADTYTYNNFIDGLCKSG 477
           M   G+ PTV TY  +      + +++ ALKLF +M   + V  +T  YN  I+   K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666

Query: 478 FVLEALELFRAIRDSKYELNIVSYNCL 504
              +AL L   ++      N+ +YN L
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNAL 693



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 219/466 (46%), Gaps = 52/466 (11%)

Query: 88  NEALCIFDYMLRMHPS-PPPVSSFNILFGCLAKNK--HYDTVLSLFKRLNSAGLFPDIYT 144
           ++A  + D ML+     PP   + +I+   + K +    + +++L  R +S G+ P+   
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVW 261

Query: 145 HSILINCFCKMGRVSHGFVVLGRILR--------------SCF----------------- 173
            +  I+  CK  R +  + +L  +++              SC                  
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMD 321

Query: 174 ----TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF------ACEPDVFTYNTLINGLC 223
                P+ VT   LI  LC   R+ EA  +F + R          + D   +NTLI+GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381

Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
           + G    A  L   M     +    C PN VTYN +IDG C+ G ++ AKE+  +MK++ 
Sbjct: 382 KVGRLKEAEELLVRM-----KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436

Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
           I P+VVT  +++ G C  +  N A   F++M  +GV+ +VVT+  ++   C    ++KA 
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496

Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
              E M+  G +P+   Y  LI G C   +   A ++   ++  G   D+++YN LI  +
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ-VERALKLFDEMRRNHVAAD 462
           C   + E+   + ++M  +G KP  +TYNTL +  F  H+  E   ++ ++MR + +   
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTL-ISFFGKHKDFESVERMMEQMREDGLDPT 615

Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIR-DSKYELNIVSYNCLIDG 507
             TY   ID  C  G + EAL+LF+ +   SK   N V YN LI+ 
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 152/351 (43%), Gaps = 42/351 (11%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P   ++N L     +    +T   +  R+    + P++ T + ++   C+   ++   V 
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
              + +     N VT+ +LI   C+ S + +A   + K     C PD   Y  LI+GLC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
                 A+ + E++  G     ++       YN +I   C +   +K  E+   M+ E  
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLA------YNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577

Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
            PD +TY ++I  F    D+   +R+  +M + G+ P V T+  ++D  C  G++D+A +
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637

Query: 345 LLELM-IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
           L + M +   VNPNT  YN L                                   IN +
Sbjct: 638 LFKDMGLHSKVNPNTVIYNIL-----------------------------------INAF 662

Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
            K  +  +ALSL  EM  K ++P V TYN LF  L E  Q E  LKL DEM
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 178/402 (44%), Gaps = 31/402 (7%)

Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI---LRSCFTPNAVTF 180
           D +L L++      +   I    +LI  F +MG V+   +V  R+   +++    N V  
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVD 193

Query: 181 TSLIKGLCAES-----RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
             L  GL  ++      +++  ++F  +R+ A   D+  +      L      I  ++ F
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITA---DIVLHEVWKERLLTEEKIIALISRF 250

Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
                     GV   PN+V     I  LCK    + A ++   +       +   + +++
Sbjct: 251 -------SSHGV--SPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301

Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRG-- 353
                  D +    L ++M +  ++PDVVT  ++++ LCK+ ++D+A  + E M  RG  
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKR 359

Query: 354 ------VNPNTYTYNTLIDGYCLTDKIDHARKLFVSME-SNGCMHDVVSYNTLINWYCKN 406
                 +  ++  +NTLIDG C   ++  A +L V M+    C+ + V+YN LI+ YC+ 
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419

Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
             +E A  + S M    IKP VVT NT+  G+   H +  A+  F +M +  V  +  TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479

Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
              I   C    V +A+  +  + ++    +   Y  LI GL
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 42/287 (14%)

Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
           P V + N + G + ++   +  +  F  +   G+  ++ T+  LI+  C +  V      
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498

Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
             ++L +  +P+A  + +LI GLC   R  +A  +  K +      D+  YN LI   C 
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558

Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT-------------------------- 258
             +   A  ++E + +   E     KP+++TYNT                          
Sbjct: 559 KNN---AEKVYEMLTDMEKEGK---KPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612

Query: 259 ---------IIDGLCKEGFVDKAKELFLKMK-DENINPDVVTYTSVIRGFCYANDWNEAK 308
                    +ID  C  G +D+A +LF  M     +NP+ V Y  +I  F    ++ +A 
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672

Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
            L  EM  + V+P+V T++ +   L +  + +   +L++ M+   VN
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVN 719



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 10/232 (4%)

Query: 89  EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
           +A+  ++ ML    SP     + ++ G     + +D +  + ++L   G   D+  +++L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLKEGGFSLDLLAYNML 552

Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
           I  FC        + +L  + +    P+++T+ +LI              +  + R    
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612

Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
           +P V TY  +I+  C  G    AL LF++M            PNTV YN +I+   K G 
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMG-----LHSKVNPNTVIYNILINAFSKLGN 667

Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
             +A  L  +MK + + P+V TY ++   F   N+  + + L +++MD+ V+
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNAL---FKCLNEKTQGETL-LKLMDEMVE 715


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 187/332 (56%), Gaps = 12/332 (3%)

Query: 179 TFTSLIKGLCAESRIMEAAALFTK-HRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
           ++ +++      +RIM A A+F +  +    +PDV TY T+I G C+ G    A N+F+E
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278

Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD-ENINPDVVTYTSVIR 296
           M          CKPN VTYNT+I+G CK+G ++ A ++  +M + E+  PD VTYT++I 
Sbjct: 279 MG---------CKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLID 329

Query: 297 GFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNP 356
           G+C   +  EA +   EM+ +  +P+V+T++ I+  LC NG +D+A R++  M   G+  
Sbjct: 330 GYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKD 389

Query: 357 NTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLY 416
           N  T+ +++ G C+  K+D A +    M   G   D  +Y  ++N YCK    ++A+SL 
Sbjct: 390 NVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLL 449

Query: 417 SEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
            EM S+GI P+V ++N +F  L E  + ++A  +  +M++     +  +Y+  IDGLCK+
Sbjct: 450 KEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKA 509

Query: 477 -GFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
            G + E  E    +  + + L+   Y+ L+ G
Sbjct: 510 KGRMHEVEEFVDDMCRNGHHLDASMYSWLVKG 541



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 193/372 (51%), Gaps = 16/372 (4%)

Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILR-SCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
           +++++ ++  F K  R+     V  +I++     P+  T+T++I+G C    I  A  +F
Sbjct: 217 LFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVF 276

Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
            +     C+P++ TYNT+ING C+ G    A+ + ++M          C P+TVTY T+I
Sbjct: 277 DE---MGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETED-----CMPDTVTYTTLI 328

Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
           DG CK G +++A +   +M   N  P+V+TY ++I G C   + +EAKR+   M   G++
Sbjct: 329 DGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLK 388

Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
            +V T + I+  LC  GK+D A+R L+ M+  G+  +   Y  +++ YC   K D A  L
Sbjct: 389 DNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISL 448

Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
              M+S G    V S+N +     ++   ++A  +  +M   G  P  ++Y+T+  GL +
Sbjct: 449 LKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCK 508

Query: 441 ----IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
               +H+VE   +  D+M RN    D   Y+  + G C+ G    A+ LF  + D  Y +
Sbjct: 509 AKGRMHEVE---EFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVI 565

Query: 497 NIVSYNCLIDGL 508
           N+ S+   + GL
Sbjct: 566 NLESFLAFVKGL 577



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 191/408 (46%), Gaps = 50/408 (12%)

Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLF-PDIYTHSILINCFCKMGRVSHGFVVLGR 167
           S+N + G   K        ++F ++   G+  PD+ T++ +I  +CKMG + +   V   
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278

Query: 168 ILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH--RVFACEPDVFTYNTLINGLCRT 225
           +   C  PN VT+ ++I G C +  +ME+A            C PD  TY TLI+G C+ 
Sbjct: 279 M--GC-KPNLVTYNTMINGFCKKG-LMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKR 334

Query: 226 GHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
           G    A+   EEM + N      C+PN +TYN II GLC  G VD+AK +  +M+   + 
Sbjct: 335 GELEEAMKYMEEMVSRN------CEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLK 388

Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
            +V T+TS+++G C     ++A R   EM+  G++ D   + V+++E CK GK D A  L
Sbjct: 389 DNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISL 448

Query: 346 LELMIWRGVNP-----------------------------------NTYTYNTLIDGYCL 370
           L+ M  RG+NP                                   N  +Y+T+IDG C 
Sbjct: 449 LKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCK 508

Query: 371 TDKIDHARKLFVS-MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
                H  + FV  M  NG   D   Y+ L+  YC++ + + A+ L+ EML  G    + 
Sbjct: 509 AKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLE 568

Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID-GLCKS 476
           ++     GL    +     K F+EM R     D + Y   +D  LCK+
Sbjct: 569 SFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCKN 616



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 8/319 (2%)

Query: 90  ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
           A+ I D M       P   ++  L     K    +  +   + + S    P++ T++ +I
Sbjct: 304 AMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAII 363

Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
              C  G V     ++ R+  +    N  T TS++KGLC   ++ +AA    +      E
Sbjct: 364 YGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGME 423

Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
            D   Y  ++N  C+ G    A++L +EM +          P+  ++N +   L + G  
Sbjct: 424 ADAKAYGVVVNEYCKIGKADDAISLLKEMKSRG------INPSVSSFNAVFRILVESGKT 477

Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYAND-WNEAKRLFIEMMDQGVQPDVVTFSV 328
           DKA  +  +MK     P+ ++Y++VI G C A    +E +    +M   G   D   +S 
Sbjct: 478 DKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSW 537

Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
           ++   C++G  D A RL   M+  G   N  ++   + G    +K     K F  M    
Sbjct: 538 LVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRC 597

Query: 389 CMHDVVSYNTLINWY-CKN 406
              D+  Y  +++ + CKN
Sbjct: 598 PGIDIHKYRRILDEHLCKN 616


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,554,433,999
Number of Sequences: 23463169
Number of extensions: 302122296
Number of successful extensions: 1019034
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9090
Number of HSP's successfully gapped in prelim test: 3868
Number of HSP's that attempted gapping in prelim test: 734225
Number of HSP's gapped (non-prelim): 82524
length of query: 508
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 361
effective length of database: 8,910,109,524
effective search space: 3216549538164
effective search space used: 3216549538164
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)