BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044044
(508 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 272/473 (57%), Gaps = 45/473 (9%)
Query: 71 KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
+E+ +G ++ L ++A+ +F M++ P P + F+ L +AK +D V+SL
Sbjct: 49 REKLSRNGLSELKL---DDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLG 104
Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
+++ + G+ + YT+SILINCFC+ ++ VLG++++ + PN VT +SL+ G C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 191 SRIMEAAALFTK-----------------HRVF------------------ACEPDVFTY 215
RI EA AL + H +F C+PD+ TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
++NGLC+ G T +A NL +M G E P + YNTIIDGLCK +D A L
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
F +M+ + I P+VVTY+S+I C W++A RL +M+++ + PDV TFS ++D K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
GK+ +A +L + M+ R ++P+ TY++LI+G+C+ D++D A+++F M S C DVV+
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
YNTLI +CK K VEE + ++ EM +G+ VTYN L GLF+ + A ++F EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ V + TYN +DGLCK+G + +A+ +F ++ SK E I +YN +I+G+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 195/361 (54%), Gaps = 6/361 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V +N + L K KH D L+LFK + + G+ P++ T+S LI+C C GR S +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L ++ P+ TF++LI E +++EA L+ + + +P + TY++LING C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
A +FE M + + C P+ VTYNT+I G CK V++ E+F +M +
Sbjct: 374 HDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
+ VTY +I+G A D + A+ +F EM+ GV P+++T++ ++D LCKNGK++KA
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
+ E + + P YTYN +I+G C K++ LF ++ G DVV+YNT+I+ +C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
+ EEA +L+ EM G P YNTL E + +L EMR A D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 465 T 465
T
Sbjct: 608 T 608
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 201/403 (49%), Gaps = 7/403 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ + D M+ P V+ + ++ L K D +L ++ L P + ++
Sbjct: 203 SEAMALIDRMVAKGCQPDLVT-YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+I+ CK + + + PN VT++SLI LC R +A+ L +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
PDVFT++ LI+ + G + A L++EM + P+ VTY+++I+G C
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS------IDPSIVTYSSLINGFCMHD 375
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+D+AK++F M ++ PDVVTY ++I+GFC E +F EM +G+ + VT++
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
+++ L + G D A + + M+ GV PN TYNTL+DG C K++ A +F ++ +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
+ +YN +I CK VE+ L+ + KG+KP VV YNT+ G E A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIR 490
LF EM+ + ++ YN I + G + EL + +R
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 8/255 (3%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA +F++M+ H P V ++N L K K + + +F+ ++ GL + T++I
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI + G + ++ PN +T+ +L+ GLC ++ +A +F +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
EP ++TYN +I G+C+ G +LF ++ GV KP+ V YNT+I G C++G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 550
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
++A LF +MK++ P+ Y ++IR D + L EM G D T
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610
Query: 328 VIMDELCKNGKMDKA 342
++ + L +G++DK+
Sbjct: 611 LVTNML-HDGRLDKS 624
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 274/489 (56%), Gaps = 36/489 (7%)
Query: 20 LRCNFSSSFPHTRKPTSSISENEPSYPTTTSKLKESLRLTVKDRASLKKFLKERCKSSGQ 79
L C SS F + SSIS + +E LR + D
Sbjct: 31 LLCTISSFFSSCERDFSSISNGNVCF-------RERLRSGIVD----------------- 66
Query: 80 GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
I ++A+ +F M+R P P V F+ F +A+ K ++ VL K+L G+
Sbjct: 67 -----IKKDDAIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
+IYT +I+INCFC+ + + VLG++++ + P+ TF +LIKGL E ++ EA L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
+ C+PDV TYN+++NG+CR+G T +AL+L +M N K + TY+TI
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVFTYSTI 234
Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
ID LC++G +D A LF +M+ + I VVTY S++RG C A WN+ L +M+ + +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
P+V+TF+V++D K GK+ +A+ L + MI RG++PN TYNTL+DGYC+ +++ A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
+ M N C D+V++ +LI YC K V++ + ++ + +G+ VTY+ L G
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
+ +++ A +LF EM + V D TY +DGLC +G + +ALE+F ++ SK +L IV
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 500 SYNCLIDGL 508
Y +I+G+
Sbjct: 475 MYTTIIEGM 483
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 320 bits (820), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 261/453 (57%), Gaps = 30/453 (6%)
Query: 85 ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
I ++A+ +F M++ P P V FN LF +AK K Y+ VL+L K++ S G+ IYT
Sbjct: 67 IKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
SI+INCFC+ ++S+ F +G+I++ + P+ V F +L+ GLC E R+ EA L +
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------FGVVCKP---- 251
+P + T NTL+NGLC G A+ L + M + V+CK
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 252 ----------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
+ V Y+ IIDGLCK+G +D A LF +M+ + D++TY ++I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
GFC A W++ +L +M+ + + P+VVTFSV++D K GK+ +A +LL+ M+ RG+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
PNT TYN+LIDG+C ++++ A ++ M S GC D++++N LIN YCK +++ L L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
+ EM +G+ VTYNTL G + ++E A KLF EM V D +Y +DGLC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+G + +ALE+F I SK EL+I Y +I G+
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 188/383 (49%), Gaps = 6/383 (1%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
++I+ L K+ D +LF + G DI T++ LI FC GR G +L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
+ +PN VTF+ LI E ++ EA L + P+ TYN+LI+G C+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
A+ + + M + C P+ +T+N +I+G CK +D ELF +M + + V
Sbjct: 386 EAIQMVDLMISKG------CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
TY ++++GFC + AK+LF EM+ + V+PD+V++ +++D LC NG+++KA + +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
+ + Y +I G C K+D A LF S+ G D +YN +I+ C+ +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
+A L+ +M +G P +TYN L A +L +EM+ + AD T
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 470 IDGLCKSGFVLEALELFRAIRDS 492
I+ L L++ R S
Sbjct: 620 INMLSSGELDKSFLDMLSTTRAS 642
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 30/450 (6%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EAL + D M+ M P ++ N L L N + L R+ G P+ T+
Sbjct: 175 SEALELVDRMVEMGHKPTLIT-LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
++N CK G+ + +L ++ +AV ++ +I GLC + + A LF + +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
+ D+ TYNTLI G C G L +M VV
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
PNT+TYN++IDG CKE +++A ++ M + +PD++T+ +I G+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
C AN ++ LF EM +GV + VT++ ++ C++GK++ A +L + M+ R V P+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
+Y L+DG C +++ A ++F +E + D+ Y +I+ C V++A L+
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
+ KG+K YN + L + +A LF +M A D TYN I
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
A EL ++ S + ++ + +I+ L
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINML 623
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 266/456 (58%), Gaps = 42/456 (9%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ +F M++ P P V FN L +AK +D V+SL +R+ + + D+Y+++I
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
LINCFC+ ++ VLG++++ + P+ VT +SL+ G C RI EA AL +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 203 ------------HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVAL 232
H +F C+PD+FTY T++NGLC+ G +AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
+L ++M G E + V Y TIID LC V+ A LF +M ++ I P+VVTY
Sbjct: 241 SLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
S+IR C W++A RL +M+++ + P+VVTFS ++D K GK+ +A +L + MI R
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
++P+ +TY++LI+G+C+ D++D A+ +F M S C +VV+YNTLI +CK K VEE
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
+ L+ EM +G+ VTYNTL GLF+ + A K+F +M + V D TY+ +DG
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
LCK G + +AL +F ++ SK E +I +YN +I+G+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 210/395 (53%), Gaps = 12/395 (3%)
Query: 79 QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
+GDI+L AL + M + V + + L K+ + L+LF +++ G+
Sbjct: 233 RGDIDL-----ALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
P++ T++ LI C C GR S +L ++ PN VTF++LI E +++EA
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
L+ + + +PD+FTY++LING C A ++FE M + + C PN VTYNT
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNT 400
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
+I G CK V++ ELF +M + + VTY ++I+G A D + A+++F +M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
V PD++T+S+++D LCK GK++KA + E + + P+ YTYN +I+G C K++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
LF S+ G +V+ Y T+I+ +C+ EEA +L+ EM G P TYNTL
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
+ +L EMR D T + I+ L
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 30/432 (6%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ + D M M P V+ ++ G NK + V +L R+ + G PD++T+
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGT 225
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
++N CK G + +L ++ + + V +T++I LC + +A LFT+
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
P+V TYN+LI LC G A L +M VV
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
P+ TY+++I+G C +D+AK +F M ++ P+VVTY ++I+GF
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
C A E LF EM +G+ + VT++ ++ L + G D A ++ + M+ GV P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
TY+ L+DG C K++ A +F ++ + D+ +YN +I CK VE+ L+
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
+ KG+KP V+ Y T+ G E A LF EM+ + ++ TYN I + G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 479 VLEALELFRAIR 490
+ EL + +R
Sbjct: 586 KAASAELIKEMR 597
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%)
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
+D A +LF +M P +V + ++ N ++ L M + + D+ ++++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
+++ C+ ++ A +L M+ G P+ T ++L++GYC +I A L M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
+ V++NTLI+ + EA++L M+++G +P + TY T+ GL + ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
L +M + + AD Y ID LC V +AL LF + + N+V+YN LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 35/206 (16%)
Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
K+D A L M+ P+ +N L+ +K D L M++ +D+ SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 398 TLI-----------------------------------NWYCKNKDVEEALSLYSEMLSK 422
LI N YC K + EA++L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
+P VT+NTL GLF ++ A+ L D M D +TY ++GLCK G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
L L + + K E ++V Y +ID L
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDAL 265
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 314 bits (805), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 265/473 (56%), Gaps = 46/473 (9%)
Query: 71 KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
KER ++ G DI + N+A+ +F+ M++ P P P+ FN L +A+ K YD VL
Sbjct: 39 KERLRN-GIVDIKV---NDAIDLFESMIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFC 93
Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
K + G+ D+YT +I+INC+C+ ++ F VLGR + + P+ +TF++L+ G C E
Sbjct: 94 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLC--------------------------- 223
R+ EA AL + PD+ T +TLINGLC
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 224 --------RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
++G++ +AL+LF +M N K + V Y+ +ID LCK+G D A L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
F +M+ + I DVVTY+S+I G C W++ ++ EM+ + + PDVVTFS ++D K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
GK+ +A L MI RG+ P+T TYN+LIDG+C + + A ++F M S GC D+V+
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
Y+ LIN YCK K V++ + L+ E+ SKG+ P +TYNTL LG + ++ A +LF EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
V TY +DGLC +G + +ALE+F ++ S+ L I YN +I G+
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 215/421 (51%), Gaps = 7/421 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EAL + D M+ P V+ + + L K+ + L LF+++ + + +SI
Sbjct: 192 SEALVLIDRMVEYGFQPDEVT-YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+I+ CK G + + + VT++SLI GLC + + + A + +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
PDV T++ LI+ + G + A L+ EM P+T+TYN++IDG CKE
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG------IAPDTITYNSLIDGFCKEN 364
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+ +A ++F M + PD+VTY+ +I +C A ++ RLF E+ +G+ P+ +T++
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ C++GK++ A L + M+ RGV P+ TY L+DG C +++ A ++F M+ +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
+ YN +I+ C V++A SL+ + KG+KP VVTYN + GL + + A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
LF +M+ + D +TYN I ++ ++EL ++ + + + +ID
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Query: 508 L 508
L
Sbjct: 605 L 605
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 272/481 (56%), Gaps = 51/481 (10%)
Query: 72 ERCKSSGQGDI---------NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH 122
ER +S GD ++I ++A+ +F M++ P P V FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNK 98
Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
++ V+SL +++ + G+ D+YT+SI INCFC+ ++S VL ++++ + P+ VT +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 183 LIKGLCAESRIMEAAALFTK-----------------HRVF------------------A 207
L+ G C RI +A AL + H +F
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C+PD+ TY T++NGLC+ G +AL+L ++M G E + V YNTIIDGLCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVVIYNTIIDGLCKYK 272
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+D A LF +M ++ I PDV TY+S+I C W++A RL +M+++ + P+VVTFS
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++D K GK+ +A +L + MI R ++P+ +TY++LI+G+C+ D++D A+ +F M S
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
C +VV+Y+TLI +CK K VEE + L+ EM +G+ VTY TL G F+ + A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+F +M V + TYN +DGLCK+G + +A+ +F ++ S E +I +YN +I+G
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 508 L 508
+
Sbjct: 513 M 513
Score = 245 bits (625), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 214/387 (55%), Gaps = 12/387 (3%)
Query: 79 QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
+GDI+L AL + M + V +N + L K KH D L+LF +++ G+
Sbjct: 236 RGDIDL-----ALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
PD++T+S LI+C C GR S +L ++ PN VTF++LI E +++EA
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
L+ + + +PD+FTY++LING C A ++FE M + + C PN VTY+T
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYST 403
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
+I G CK V++ ELF +M + + VTYT++I GF A D + A+ +F +M+ G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
V P+++T+++++D LCKNGK+ KA + E + + P+ YTYN +I+G C K++
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
+LF ++ G +V++YNT+I+ +C+ EEA SL +M G P TYNTL
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 439 FEIHQVERALKLFDEMRRNHVAADTYT 465
E + +L EMR A D T
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDAST 610
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 202/432 (46%), Gaps = 30/432 (6%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ + D M+ M P + ++ G NK + V +L ++ G PD+ T+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGT 228
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
++N CK G + +L ++ + + V + ++I GLC + +A LFT+
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------------------ 249
PDVFTY++LI+ LC G A L +M VV
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 250 -----------KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
P+ TY+++I+G C +D+AK +F M ++ P+VVTY+++I+GF
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
C A E LF EM +G+ + VT++ ++ + D A + + M+ GV+PN
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
TYN L+DG C K+ A +F ++ + D+ +YN +I CK VE+ L+
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
+ KG+ P V+ YNT+ G E A L +M+ + ++ TYN I + G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 479 VLEALELFRAIR 490
+ EL + +R
Sbjct: 589 REASAELIKEMR 600
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 8/255 (3%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA +F+ M+ P V +++ L K K + + LF+ ++ GL + T++
Sbjct: 380 DEAKHMFELMIS-KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI+ F + + +V +++ PN +T+ L+ GLC ++ +A +F +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
EPD++TYN +I G+C+ G LF ++ GV PN + YNT+I G C++G
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK----GV--SPNVIAYNTMISGFCRKG 552
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
++A L KMK++ P+ TY ++IR D + L EM G D T
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 612
Query: 328 VIMDELCKNGKMDKA 342
++ + L +G++DK+
Sbjct: 613 LVTNML-HDGRLDKS 626
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 312 bits (799), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 262/456 (57%), Gaps = 42/456 (9%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ +F M++ P P V F+ L +AK K +D V+S +++ G+ ++YT++I
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK----- 202
+INC C+ ++S +LG++++ + P+ VT SL+ G C +RI EA AL +
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 203 ------------HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVAL 232
H +F C+PD+ TY +INGLC+ G +AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
NL +M G E + V Y+T+ID LCK VD A LF +M ++ I PDV TY+
Sbjct: 226 NLLNKMEKGKIE------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
S+I C W++A RL +M+++ + P+VVTF+ ++D K GK+ +A +L + MI R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
++PN TYN+LI+G+C+ D++D A+++F M S C+ DVV+YNTLIN +CK K V +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
+ L+ +M +G+ VTY TL G F+ + A +F +M + V + TYN +DG
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
LCK+G + +A+ +F ++ SK E +I +YN + +G+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 213/401 (53%), Gaps = 12/401 (2%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
P+ AL + + M + V ++ + L K +H D L+LF +++ G+ PD++T+S
Sbjct: 221 PDLALNLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
LI+C C GR S +L +L PN VTF SLI E +++EA LF +
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
+ +P++ TYN+LING C A +F M + + C P+ VTYNT+I+G CK
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNTLINGFCKA 393
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
V ELF M + + VTYT++I GF A+D + A+ +F +M+ GV P+++T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
+ ++D LCKNGK++KA + E + + P+ YTYN + +G C K++ LF S+
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
G DV++YNT+I+ +CK EEA +L+ +M G P TYNTL
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 447 ALKLFDEMRRNHVAADTYTY----NNFIDGLCKSGFVLEAL 483
+ +L EMR A D TY + DG GF LE L
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGF-LEVL 613
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 12/319 (3%)
Query: 192 RIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
++ EA LF K R F P + ++ L++ + + + ++ E+M GV
Sbjct: 45 KLDEAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKMEI----LGV- 96
Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
N TYN +I+ LC+ + A + KM P +VT S++ GFC+ N +EA
Sbjct: 97 -SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
L +M++ G QPD VTF+ ++ L ++ K +A L+E M+ +G P+ TY +I+G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
C + D A L ME DVV Y+T+I+ CK + V++AL+L++EM +KGI+P V
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
TY++L L + A +L +M + + T+N+ ID K G ++EA +LF
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 489 IRDSKYELNIVSYNCLIDG 507
+ + NIV+YN LI+G
Sbjct: 336 MIQRSIDPNIVTYNSLING 354
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
K+D+A L M+ P+ ++ L+ K D ME G H++ +YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN 457
+IN C+ + AL++ +M+ G P++VT N+L G +++ A+ L D+M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 458 HVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
DT T+ + GL + EA+ L + + ++V+Y +I+GL
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 312 bits (799), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 259/459 (56%), Gaps = 42/459 (9%)
Query: 85 ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYT 144
I ++A+ +F M+ P P V F+ LF +AK K YD VL+L K++ G+ ++YT
Sbjct: 67 IKADDAIDLFRDMIHSRPLPT-VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
SI+INCFC+ ++ F +G+I++ + PN +TF++LI GLC E R+ EA L +
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT--------- 255
+PD+ T NTL+NGLC +G A+ L ++M E+G C+PN VT
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQPNAVTYGPVLNVMC 239
Query: 256 --------------------------YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
Y+ IIDGLCK G +D A LF +M+ + I +++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
TY +I GFC A W++ +L +M+ + + P+VVTFSV++D K GK+ +A L + M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
I RG+ P+T TY +LIDG+C + +D A ++ M S GC ++ ++N LIN YCK +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
++ L L+ +M +G+ VTYNTL G E+ ++ A +LF EM V + TY
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+DGLC +G +ALE+F I SK EL+I YN +I G+
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 7/420 (1%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA+ + D M+ P V+ + + + K+ + L +++ + D +SI+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I+ CK G + + F + + T N +T+ LI G C R + A L
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
P+V T++ LI+ + G A L +EM + G+ P+T+TY ++IDG CKE
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTITYTSLIDGFCKENH 383
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
+DKA ++ M + +P++ T+ +I G+C AN ++ LF +M +GV D VT++
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
++ C+ GK++ A L + M+ R V PN TY L+DG C + + A ++F +E +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
D+ YN +I+ C V++A L+ + KG+KP V TYN + GL + + A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
LF +M + A D +TYN I G ++++L ++ + ++ + +ID L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 311 bits (797), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 261/467 (55%), Gaps = 34/467 (7%)
Query: 71 KERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
+ER +S I I ++A+ +F M R P P + F+ LF +A+ K YD VL L
Sbjct: 41 RERLRSG----IVDIKEDDAVDLFQEMTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLC 95
Query: 131 KRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAE 190
K++ G+ ++YT SI+INC C+ ++S F +G+I++ + P+ VTF++LI GLC E
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 191 SRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------ 244
R+ EA L + +P + T N L+NGLC G A+ L + M +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 245 ---FGVVCKP--------------------NTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
V+CK + V Y+ IIDGLCK+G +D A LF +M+
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
+ D++ YT++IRGFCYA W++ +L +M+ + + PDVV FS ++D K GK+ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
A L + MI RG++P+T TY +LIDG+C +++D A + M S GC ++ ++N LIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
YCK +++ L L+ +M +G+ VTYNTL G E+ ++E A +LF EM V
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
D +Y +DGLC +G +ALE+F I SK EL+I YN +I G+
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 210/418 (50%), Gaps = 7/418 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EAL + D M+ M P ++ ++ G K D VL L R+ G P+ T+
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGP 217
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
++ CK G+ + +L ++ +AV ++ +I GLC + + A LF + +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
+ D+ Y TLI G C G L +M P+ V ++ +ID KEG
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK------ITPDVVAFSALIDCFVKEG 331
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+ +A+EL +M I+PD VTYTS+I GFC N ++A + M+ +G P++ TF+
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++++ CK +D L M RGV +T TYNTLI G+C K++ A++LF M S
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
D+VSY L++ C N + E+AL ++ ++ ++ + YN + G+ +V+ A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
LF + V D TYN I GLCK G + EA LFR + + + N +YN LI
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 206/421 (48%), Gaps = 7/421 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ + D M+ P V+ + + + K+ + L +++ + D +SI
Sbjct: 194 SDAVLLIDRMVETGFQPNEVT-YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+I+ CK G + + F + + F + + +T+LI+G C R + A L
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
PDV ++ LI+ + G A L +EM + G+ P+TVTY ++IDG CKE
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTVTYTSLIDGFCKEN 366
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+DKA + M + P++ T+ +I G+C AN ++ LF +M +GV D VT++
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ C+ GK++ A L + M+ R V P+ +Y L+DG C + + A ++F +E +
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
D+ YN +I+ C V++A L+ + KG+KP V TYN + GL + + A
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
LF +M + + + TYN I G ++ +L I+ + ++ + ++D
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDM 606
Query: 508 L 508
L
Sbjct: 607 L 607
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%)
Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
V+Y +R ++A LF EM +P ++ FS + + + + D L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
M +G+ N YT + +I+ C K+ A + G D V+++TLIN C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
V EAL L M+ G KPT++T N L GL +V A+ L D M + TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ +CKSG A+EL R + + K +L+ V Y+ +IDGL
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 269/481 (55%), Gaps = 51/481 (10%)
Query: 72 ERCKSSGQGDI---------NLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH 122
ER +S GD ++I ++A+ +F M++ P P V FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNK 98
Query: 123 YDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTS 182
++ V+SL +++ + G+ D+YT+SI INCFC+ ++S VL ++++ + P+ VT +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 183 LIKGLCAESRIMEAAALFTK-----------------HRVF------------------A 207
L+ G C RI +A AL + H +F
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C+PD+ TY T++NGLC+ G +ALNL +M K N V +NTIID LCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYR 272
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
V+ A +LF +M+ + I P+VVTY S+I C W++A RL M+++ + P+VVTF+
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++D K GK+ +A +L E MI R ++P+T TYN LI+G+C+ +++D A+++F M S
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
C+ ++ +YNTLIN +CK K VE+ + L+ EM +G+ VTY T+ G F+ + A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+F +M N V D TY+ + GLC G + AL +F+ ++ S+ ELNI YN +I+G
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 508 L 508
+
Sbjct: 513 M 513
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 169/346 (48%), Gaps = 38/346 (10%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
FN + L K +H + + LF + + G+ P++ T++ LINC C GR S +L +L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
PN VTF +LI E +++EA L + + +PD TYN LING C
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
A +F+ M + + C PN TYNT+I+G CK V+ ELF +M + + V
Sbjct: 381 EAKQMFKFMVSKD------CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA------- 342
TYT++I+GF A D + A+ +F +M+ V D++T+S+++ LC GK+D A
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 343 ------------SRLLELMIWRG-------------VNPNTYTYNTLIDGYCLTDKIDHA 377
+ ++E M G + P+ TYNT+I G C + A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
LF M+ +G + + +YNTLI ++ D + L EM S G
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 130/255 (50%), Gaps = 11/255 (4%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA +F +M+ P + ++N L K K + + LF+ ++ GL + T++
Sbjct: 380 DEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+I F + G +V +++ + + +T++ L+ GLC+ ++ A +F +
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
E ++F YNT+I G+C+ G A +LF ++ KP+ VTYNT+I GLC +
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKR 549
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+ +A +LF KMK++ P+ TY ++IR D + L EM G D T S
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 328 VIMDELCKNGKMDKA 342
++ + L +G++DK+
Sbjct: 610 LVTNML-HDGRLDKS 623
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 264/462 (57%), Gaps = 42/462 (9%)
Query: 82 INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
+N + ++A+ +F M++ P P V F+ L +AK +D V+SL +++ + G+ +
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115
Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM------- 194
+YT+SILINCFC+ ++S VL ++++ + P+ VT SL+ G C +RI
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 195 ----------------------------EAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
EA AL + V C+PD+ TY ++NGLC+ G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
+AL+L ++M G E P V YNTIID LC V+ A LF +M ++ I P
Sbjct: 236 DIDLALSLLKKMEQGKIE------PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
+VVTY S+IR C W++A RL +M+++ + P+VVTFS ++D K GK+ +A +L
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
+ MI R ++P+ +TY++LI+G+C+ D++D A+ +F M S C +VV+YNTLI +CK
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
K V+E + L+ EM +G+ VTY TL G F+ + + A +F +M + V D TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ +DGLC +G V AL +F ++ SK E +I +YN +I+G+
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 208/387 (53%), Gaps = 12/387 (3%)
Query: 79 QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGL 138
+GDI+L AL + M P V +N + L K+ + L+LF +++ G+
Sbjct: 234 RGDIDL-----ALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 139 FPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
P++ T++ LI C C GR S +L ++ PN VTF++LI E +++EA
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
L+ + + +PD+FTY++LING C A ++FE M + + C PN VTYNT
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNT 401
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
+I G CK VD+ ELF +M + + VTYT++I GF A + + A+ +F +M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
V PD++T+S+++D LC NGK++ A + E + + P+ YTYN +I+G C K++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
LF S+ G +VV+Y T+++ +C+ EEA +L+ EM +G P TYNTL
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 439 FEIHQVERALKLFDEMRRNHVAADTYT 465
+ +L EMR D T
Sbjct: 582 LRDGDKAASAELIREMRSCRFVGDAST 608
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 8/255 (3%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA +F+ M+ P V ++N L K K D + LF+ ++ GL + T++
Sbjct: 378 DEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI+ F + + +V +++ P+ +T++ L+ GLC ++ A +F +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
EPD++TYN +I G+C+ G +LF ++ GV KPN VTY T++ G C++G
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK----GV--KPNVVTYTTMMSGFCRKG 550
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
++A LF +MK+E PD TY ++IR D + L EM D T
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 610
Query: 328 VIMDELCKNGKMDKA 342
++ + L +G++DK+
Sbjct: 611 LVTNML-HDGRLDKS 624
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 270/479 (56%), Gaps = 50/479 (10%)
Query: 73 RCKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
R SSG GD I N +A+ +F M++ P P V FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 102
Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
V+SL +++ + +YT++ILINCFC+ ++S +LG++++ + P+ VT +SL+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 185 KGLCAESRIMEAAALFTK-----------------HRVF------------------ACE 209
G C RI +A AL + H +F C+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
P++ TY ++NGLC+ G T +ALNL +M E + V +NTIID LCK V
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHV 276
Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
D A LF +M+ + I P+VVTY+S+I C W++A +L +M+++ + P++VTF+ +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
+D K GK +A +L + MI R ++P+ +TYN+L++G+C+ D++D A+++F M S C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
DVV+YNTLI +CK+K VE+ L+ EM +G+ VTY TL GLF + A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+F +M + V D TY+ +DGLC +G + +ALE+F ++ S+ +L+I Y +I+G+
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 192/356 (53%), Gaps = 6/356 (1%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
FN + L K +H D L+LFK + + G+ P++ T+S LI+C C GR S +L ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
PN VTF +LI E + +EA L+ + +PD+FTYN+L+NG C
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 230 VALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV 289
A +FE M + + C P+ VTYNT+I G CK V+ ELF +M + D V
Sbjct: 383 KAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 290 TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELM 349
TYT++I+G + D + A+++F +M+ GV PD++T+S+++D LC NGK++KA + + M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 350 IWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
+ + Y Y T+I+G C K+D LF S+ G +VV+YNT+I+ C + +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
+EA +L +M G P TYNTL + +L EMR D T
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 7/407 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ + D M++ P + ++ ++ L K D L+L ++ +A + D+ +
Sbjct: 207 SEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+I+ CK V + + PN VT++SLI LC+ R +A+ L +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
P++ T+N LI+ + G + A L+++M + P+ TYN++++G C
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS------IDPDIFTYNSLVNGFCMHD 379
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+DKAK++F M ++ PDVVTY ++I+GFC + + LF EM +G+ D VT++
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ L +G D A ++ + M+ GV P+ TY+ L+DG C K++ A ++F M+ +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
D+ Y T+I CK V++ L+ + KG+KP VVTYNT+ GL ++ A
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
L +M+ + ++ TYN I + G + EL R +R ++
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA ++D M++ P + ++N L + D +F+ + S FPD+ T++ L
Sbjct: 348 EAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I FCK RV G + + + VT+T+LI+GL + A +F +
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK--------- 250
PD+ TY+ L++GLC G AL +F+ M + + +CK
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
PN VTYNT+I GLC + + +A L KMK++ P+ TY ++IR
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
D + L EM D T ++ + L +G++DK+
Sbjct: 587 RDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 308 bits (789), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 270/479 (56%), Gaps = 50/479 (10%)
Query: 73 RCKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 124
R SSG GD I N +A+ +F M++ P P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFD 102
Query: 125 TVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLI 184
V+SL +++ G+ ++YT++ILINCFC+ ++S +LG++++ + P+ VT +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 185 KGLCAESRIMEAAALFTK-----------------HRVF------------------ACE 209
G C RI +A AL + H +F C+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
P++ TY ++NGLC+ G +A NL +M E N V Y+T+ID LCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHE 276
Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
D A LF +M+++ + P+V+TY+S+I C W++A RL +M+++ + P+VVTF+ +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
+D K GK+ +A +L + MI R ++P+ +TY++LI+G+C+ D++D A+ +F M S C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
+VV+YNTLIN +CK K ++E + L+ EM +G+ VTY TL G F+ + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 450 LFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+F +M + V + TYN +DGLCK+G + +A+ +F ++ SK E I +YN +I+G+
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 195/350 (55%), Gaps = 16/350 (4%)
Query: 79 QGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
+GDI+L F+ + +M + V ++ + L K +H D L+LF + +
Sbjct: 238 RGDIDLA--------FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
G+ P++ T+S LI+C C R S +L ++ PN VTF +LI E +++EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
L+ + + +PD+FTY++LING C A ++FE M + + C PN VTY
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTY 403
Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
NT+I+G CK +D+ ELF +M + + VTYT++I GF A D + A+ +F +M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
GV P+++T++ ++D LCKNGK++KA + E + + P YTYN +I+G C K++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
LF S+ G DV+ YNT+I+ +C+ EEA +L+ +M G P
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 263/467 (56%), Gaps = 45/467 (9%)
Query: 77 SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
+G DI L ++A+ +F M + P P + F+ L +AK +D V+S +++
Sbjct: 52 TGLSDIEL---DDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 137 GLFPDIYTHSILINCFC----------------KMG-------------------RVSHG 161
G+ ++YT++ILINCFC K+G R+S
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
++ +++ + P+ VTFT+LI GL ++ EA AL + C+PD+ TY ++NG
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
LC+ G T +ALNL +M E N V Y+T+ID LCK D A LF +M++
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
+ + P+V+TY+S+I C W++A RL +M+++ + P++VTFS ++D K GK+ K
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
A +L E MI R ++PN +TY++LI+G+C+ D++ A+++ M C+ +VV+YNTLIN
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
+CK K V++ + L+ EM +G+ VTY TL G F+ + A +F +M V
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461
Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ TYN +DGLCK+G + +A+ +F ++ S E +I +YN +I+G+
Sbjct: 462 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 157/277 (56%), Gaps = 6/277 (2%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
V ++ + L K +H D L+LF + + G+ P++ T+S LI+C C GR S +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
++ PN VTF++LI + ++++A L+ + + +P++FTY++LING C
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
A + E M + C PN VTYNT+I+G CK VDK ELF +M +
Sbjct: 373 RLGEAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
+ VTYT++I GF A D + A+ +F +M+ GV P+++T+++++D LCKNGK+ KA +
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
E + + P+ YTYN +I+G C K FV+
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%)
Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
Y V+R + ++A LF M P ++ FS ++ + K K D E M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
G++ N YTYN LI+ +C ++ A L M G D+V+ N+L+N +C +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
+A++L +M+ G KP VT+ TL GLF ++ A+ L D M + D TY +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+GLCK G AL L + +K E N+V Y+ +ID L
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA + + M+R P V ++N L K K D + LF+ ++ GL + T++ L
Sbjct: 376 EAKQMLELMIR-KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I+ F + + +V +++ PN +T+ L+ GLC ++ +A +F +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 209 EPDVFTYNTLINGLCRTG 226
EPD++TYN +I G+C+ G
Sbjct: 495 EPDIYTYNIMIEGMCKAG 512
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 256/447 (57%), Gaps = 42/447 (9%)
Query: 97 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
M++ P P + FN L +AK K +D V+SL +++ G+ ++YT++ILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK-------------- 202
++S +LG++++ + P+ VT +SL+ G C RI +A AL +
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 203 ---HRVF------------------ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 241
H +F C+P++ TY ++NGLC+ G +A NL +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 242 NGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYA 301
E + V +NTIID LCK VD A LF +M+ + I P+VVTY+S+I C
Sbjct: 180 KIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 302 NDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTY 361
W++A +L +M+++ + P++VTF+ ++D K GK +A +L + MI R ++P+ +TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 362 NTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLS 421
N+LI+G+C+ D++D A+++F M S C D+ +YNTLI +CK+K VE+ L+ EM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 422 KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLE 481
+G+ VTY TL GLF + A K+F +M + V D TY+ +DGLC +G + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 482 ALELFRAIRDSKYELNIVSYNCLIDGL 508
ALE+F ++ S+ +L+I Y +I+G+
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 16/389 (4%)
Query: 79 QGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
+GDI+L F+ + +M + V FN + L K +H D L+LFK + +
Sbjct: 163 RGDIDLA--------FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
G+ P++ T+S LI+C C GR S +L ++ PN VTF +LI E + +EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
L + +PD+FTYN+LING C A +FE M + + C P+ TY
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD------CFPDLDTY 328
Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
NT+I G CK V+ ELF +M + D VTYT++I+G + D + A+++F +M+
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 317 QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDH 376
GV PD++T+S+++D LC NGK++KA + + M + + Y Y T+I+G C K+D
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 377 ARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
LF S+ G +VV+YNT+I+ C + ++EA +L +M G P TYNTL
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYT 465
+ +L EMR D T
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 206/407 (50%), Gaps = 7/407 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ + D M++ P + ++ ++ L K D +L ++ +A + D+ +
Sbjct: 132 SEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+I+ CK V + + PN VT++SLI LC+ R +A+ L +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
P++ T+N LI+ + G + A L ++M + P+ TYN++I+G C
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS------IDPDIFTYNSLINGFCMHD 304
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+DKAK++F M ++ PD+ TY ++I+GFC + + LF EM +G+ D VT++
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ L +G D A ++ + M+ GV P+ TY+ L+DG C K++ A ++F M+ +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
D+ Y T+I CK V++ L+ + KG+KP VVTYNT+ GL ++ A
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKY 494
L +M+ + D+ TYN I + G + EL R +R ++
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 31/283 (10%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA + D M++ P + ++N L + D +F+ + S FPD+ T++ L
Sbjct: 273 EAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I FCK RV G + + + VT+T+LI+GL + A +F +
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK--------- 250
PD+ TY+ L++GLC G AL +F+ M + + +CK
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
PN VTYNT+I GLC + + +A L KMK++ PD TY ++IR
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
D + L EM D T ++ + L +G++DK+
Sbjct: 512 RDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 553
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 285 bits (729), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 251/439 (57%), Gaps = 10/439 (2%)
Query: 70 LKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
L+ER + DI L N+A+ +F M++ P P V FN L + K K YD V+SL
Sbjct: 52 LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISL 107
Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
K++ G+ D+YT +I+INCFC +VS +LG++L+ + P+ VT SL+ G C
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
+R+ +A +L K +PD+ YN +I+ LC+T A + F+E+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------I 221
Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
+PN VTY +++GLC A L M + I P+V+TY++++ F EAK
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
LF EM+ + PD+VT+S +++ LC + ++D+A+++ +LM+ +G + +YNTLI+G+C
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
+++ KLF M G + + V+YNTLI + + DV++A +S+M GI P +
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
TYN L GL + ++E+AL +F++M++ + D TY I G+CK+G V EA LF ++
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 490 RDSKYELNIVSYNCLIDGL 508
+ +IV+Y ++ GL
Sbjct: 462 SLKGLKPDIVTYTTMMSGL 480
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 204/382 (53%), Gaps = 13/382 (3%)
Query: 90 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
AL I ML++ P V+ +++ G +N+ D V SL ++ G PDI ++ +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGYKPDIVAYNAII 197
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
+ CK RV+ F I R PN VT+T+L+ GLC SR +AA L +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
P+V TY+ L++ + G + A LFEEM + P+ VTY+++I+GLC +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVR------MSIDPDIVTYSSLINGLCLHDRI 311
Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
D+A ++F M + DVV+Y ++I GFC A + +LF EM +G+ + VT++ +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
+ + G +DKA M + G++P+ +TYN L+ G C +++ A +F M+
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE---IHQVER 446
D+V+Y T+I CK VEEA SL+ + KG+KP +VTY T+ GL +H+VE
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE- 490
Query: 447 ALKLFDEMRRNHVAADTYTYNN 468
L+ +M++ + + T ++
Sbjct: 491 --ALYTKMKQEGLMKNDCTLSD 510
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 279 bits (713), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 242/437 (55%), Gaps = 26/437 (5%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
P+ A+ ++ M + P + SFNIL C LS F +L G PD+ T +
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCF---------------TPNAVTFTSLIKGLCAES 191
L++ C R+S + G ++ + F TP +TF +LI GLC E
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 192 RIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 251
R++EAAAL K DV TY T++NG+C+ G T ALNL +M + KP
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKP 294
Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
+ V Y+ IID LCK+G A+ LF +M ++ I P+V TY +I GFC W++A+RL
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
+M+++ + PDV+TF+ ++ K GK+ +A +L + M+ R + P+T TYN++I G+C
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
++ D A+ +F M S DVV++NT+I+ YC+ K V+E + L E+ +G+ TY
Sbjct: 415 NRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
NTL G E+ + A LF EM + V DT T N + G C++ + EALELF I+
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 492 SKYELNIVSYNCLIDGL 508
SK +L+ V+YN +I G+
Sbjct: 531 SKIDLDTVAYNIIIHGM 547
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 207/430 (48%), Gaps = 49/430 (11%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ FDYM+R P V N + G + D +SL++++ + +IY+ +I
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI CFC ++S G++ + F
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLF---------EEMANGNGEFGVVCKPNTVTYNT 258
+PDV T+NTL++GLC AL LF E +A + + P +T+NT
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
+I+GLC EG V +A L KM + ++ DVVTY +++ G C D A L +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
++PDVV +S I+D LCK+G A L M+ +G+ PN +TYN +IDG+C + A+
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
+L M DV+++N LI+ K + EA L EML + I P VTYN++ G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
+ ++ + A +FD M + D T+N ID C++ V E ++L R I N
Sbjct: 412 CKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 499 VSYNCLIDGL 508
+YN LI G
Sbjct: 468 TTYNTLIHGF 477
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 14/369 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++ + L K+ H+ LF + G+ P+++T++ +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK--HRVFACEPDVFTYNTLINGL 222
L ++ P+ +TF +LI E ++ EA L + HR PD TYN++I G
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF--PDTVTYNSMIYGF 411
Query: 223 CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
C+ A ++F+ MA+ P+ VT+NTIID C+ VD+ +L ++
Sbjct: 412 CKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
+ + TY ++I GFC ++ N A+ LF EM+ GV PD +T ++++ C+N K+++A
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW 402
L E++ ++ +T YN +I G C K+D A LF S+ +G DV +YN +I+
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 403 YCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
+C + +A L+ +M G +P TYNTL G + +++++++L EMR N + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 463 TYTYNNFID 471
+T D
Sbjct: 642 AFTIKMVAD 650
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 34/435 (7%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA+ +FD M+ + +P V +FN L L +L ++ GL D+ T+ +
Sbjct: 209 EAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
+N CKMG +L ++ + P+ V ++++I LC + +A LF++
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK--------- 250
P+VFTYN +I+G C G A L +M N K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 251 -----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
P+TVTYN++I G CK D AK +F D +PDVVT+ ++I +C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 443
Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
A +E +L E+ +G+ + T++ ++ C+ ++ A L + MI GV P+T
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
T N L+ G+C +K++ A +LF ++ + D V+YN +I+ CK V+EA L+ +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
G++P V TYN + G + A LF +M+ N D TYN I G K+G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 480 LEALELFRAIRDSKY 494
+++EL +R + +
Sbjct: 624 DKSIELISEMRSNGF 638
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 278 bits (712), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 254/436 (58%), Gaps = 13/436 (2%)
Query: 73 RCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR 132
R S+ + +NL E + +F M++ P P V F+ + +AK+K+YD V+SLF
Sbjct: 39 RTFSTKRSSMNL---EEEIDLFCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHH 94
Query: 133 LNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESR 192
+ G+ D+Y+++I+INC C+ R V+G++++ + P+ VT +SLI G C +R
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 252
+ +A L +K PDV YNT+I+G C+ G A+ LF+ M GV + +
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD----GV--RAD 208
Query: 253 TVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFI 312
VTYN+++ GLC G A L M +I P+V+T+T+VI F ++EA +L+
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 313 EMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTD 372
EM + V PDV T++ +++ LC +G++D+A ++L+LM+ +G P+ TYNTLI+G+C +
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
++D KLF M G + D ++YNT+I Y + + A ++S M S +P + TY+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYS 385
Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
L GL +VE+AL LF+ M+++ + D TYN I G+CK G V +A +LFR++
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 493 KYELNIVSYNCLIDGL 508
+ ++VSY +I G
Sbjct: 446 GLKPDVVSYTTMISGF 461
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 45/372 (12%)
Query: 90 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
AL + M++ P V+ +++ G N+ +D + L ++ G PD+ ++ +I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DLVSKMEEMGFRPDVVIYNTII 181
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---------- 199
+ CK+G V+ + R+ R +AVT+ SL+ GLC R +AA L
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 200 ------------FTKHRVFA-------------CEPDVFTYNTLINGLCRTGHTIVALNL 234
F K F+ +PDVFTYN+LINGLC G A +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
+ M C P+ VTYNT+I+G CK VD+ +LF +M + D +TY ++
Sbjct: 302 LDLMVTKG------CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
I+G+ A + A+ +F M +P++ T+S+++ LC N +++KA L E M +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
+ TYN +I G C ++ A LF S+ G DVVSY T+I+ +C+ + +++
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 415 LYSEMLSKGIKP 426
LY +M G+ P
Sbjct: 473 LYRKMQEDGLLP 484
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 5/227 (2%)
Query: 285 NPDVVTYTSVIRGFCYAN-----DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
NP +V + S G ++ + E LF +M+ P +V FS ++ ++ K+
Sbjct: 26 NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85
Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
D L M G+ + Y+YN +I+ C + A + M G DVV+ ++L
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
IN +C+ V +A+ L S+M G +P VV YNT+ G +I V A++LFD M R+ V
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
AD TYN+ + GLC SG +A L R + N++++ +ID
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 275 bits (704), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 238/422 (56%), Gaps = 8/422 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ +F M++ P P V F+ L +AK +D V+SL +++ + G+ ++YT+SI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
IN FC+ ++S +LG++++ + P+ VT SL+ G C +RI EA AL +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
+PD T+ TL++GL + A+ L E M C+P+ VTY +I+GLCK G
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRG 229
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
D A L KM+ I DVV Y ++I G C ++A LF +M +G++PDV T++
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM-ES 386
++ LC G+ ASRLL M+ + +NP+ +N LID + K+ A KL+ M +S
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
C DVV+YNTLI +CK K VEE + ++ EM +G+ VTY TL G F+ +
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
A +F +M + V D TYN +DGLC +G V AL +F ++ +L+IV+Y +I+
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 507 GL 508
L
Sbjct: 470 AL 471
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 172/330 (52%), Gaps = 13/330 (3%)
Query: 182 SLIKGLCAESRIMEAAALF---TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
+L + + + ++ +A LF K R F P + ++ L++ + + + ++L E+M
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
N G+ N TY+ I+ C+ + A + KM P +VT S++ GF
Sbjct: 102 QN----LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155
Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
C+ N +EA L +M++ G QPD VTF+ ++ L ++ K +A L+E M+ +G P+
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
TY +I+G C + D A L ME DVV YNT+I+ CK K +++A L+++
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
M +KGIKP V TYN L L + A +L +M ++ D +N ID K G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 479 VLEALELFRAIRDSKYEL-NIVSYNCLIDG 507
++EA +L+ + SK+ ++V+YN LI G
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
K+D A L M+ P+ ++ L+ +K D L M++ G H++ +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 398 TLINWYCKNKD-----------------------------------VEEALSLYSEMLSK 422
IN++C+ + EA++L +M+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
G +P VT+ TL GLF+ ++ A+ L + M D TY I+GLCK G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 483 LELFRAIRDSKYELNIVSYNCLIDGL 508
L L + K E ++V YN +IDGL
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGL 260
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 227/407 (55%), Gaps = 12/407 (2%)
Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHG 161
P P ++ F L K + +L + L +G PD+ T++++I+ +CK G +++
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 162 FVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLING 221
VL R+ +P+ VT+ ++++ LC ++ +A + + C PDV TY LI
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 222 LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKD 281
CR A+ L +EM + C P+ VTYN +++G+CKEG +D+A + M
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 282 ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDK 341
P+V+T+ ++R C W +A++L +M+ +G P VVTF+++++ LC+ G + +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 342 ASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLIN 401
A +LE M G PN+ +YN L+ G+C K+D A + M S GC D+V+YNT++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 402 WYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAA 461
CK+ VE+A+ + +++ SKG P ++TYNT+ GL + + +A+KL DEMR +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 462 DTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
DT TY++ + GL + G V EA++ F N V++N ++ GL
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 211/405 (52%), Gaps = 11/405 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++N++ K + LS+ R++ + PD+ T++ ++ C G++ V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 165 LGRIL-RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
L R+L R C+ P+ +T+T LI+ C +S + A L + R C PDV TYN L+NG+C
Sbjct: 227 LDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
+ G A+ +M + C+PN +T+N I+ +C G A++L M +
Sbjct: 286 KEGRLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
+P VVT+ +I C A + +M G QP+ ++++ ++ CK KMD+A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
LE M+ RG P+ TYNT++ C K++ A ++ + S GC +++YNT+I+
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
K +A+ L EM +K +KP +TY++L GL +V+ A+K F E R + +
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
T+N+ + GLCKS A++ + + + N SY LI+GL
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 197/399 (49%), Gaps = 10/399 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
N AL + D RM SP V ++N + L + + + R+ +PD+ T++I
Sbjct: 189 NNALSVLD---RMSVSPD-VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI C+ V H +L + TP+ VT+ L+ G+C E R+ EA
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C+P+V T+N ++ +C TG + A L +M P+ VT+N +I+ LC++G
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG------FSPSVVTFNILINFLCRKG 358
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+ +A ++ KM P+ ++Y ++ GFC + A M+ +G PD+VT++
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ LCK+GK++ A +L + +G +P TYNT+IDG K A KL M +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
D ++Y++L+ + V+EA+ + E GI+P VT+N++ LGL + Q +RA
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
+ M + +Y I+GL G EALEL
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 17/389 (4%)
Query: 120 NKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVT 179
N HY +V NS+ D+ +++ L + G + GF L ++ P+ +
Sbjct: 88 NGHYSSV-------NSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIP 139
Query: 180 FTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMA 239
T+LI+G C + +AA + PDV TYN +I+G C+ G AL++ + M+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 240 NGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
P+ VTYNTI+ LC G + +A E+ +M + PDV+TYT +I C
Sbjct: 200 ---------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
+ A +L EM D+G PDVVT++V+++ +CK G++D+A + L M G PN
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
T+N ++ C T + A KL M G VV++N LIN+ C+ + A+ + +M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 420 LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFV 479
G +P ++YN L G + +++RA++ + M D TYN + LCK G V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 480 LEALELFRAIRDSKYELNIVSYNCLIDGL 508
+A+E+ + +++YN +IDGL
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 177/356 (49%), Gaps = 15/356 (4%)
Query: 69 FLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLS 128
++ C+ SG G A+ + D M R P V ++N+L + K D +
Sbjct: 245 LIEATCRDSGVG--------HAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
+ S+G P++ TH+I++ C GR +L +LR F+P+ VTF LI LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
+ + A + K C+P+ +YN L++G C+ A+ E M +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------ 409
Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
C P+ VTYNT++ LCK+G V+ A E+ ++ + +P ++TY +VI G A +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
+L EM + ++PD +T+S ++ L + GK+D+A + G+ PN T+N+++ G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
C + + D A V M + GC + SY LI +EAL L +E+ +KG+
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 261 bits (668), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 235/430 (54%), Gaps = 9/430 (2%)
Query: 80 GDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLF 139
G ++ I +A +F M+ P P V F L A + Y+TV+ +++ G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
D+Y+ +ILI+CFC+ R+S VLG++++ + P+ VTF SL+ G C +RI +A +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNT 258
EP+V YNTLI+GLC+ G +AL L EM G G + VTYNT
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADVVTYNT 216
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
++ GLC G A + M +INPDVVT+T++I F + +EA+ L+ EM+
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
V P+ VT++ I++ LC +G++ A + +LM +G PN TYNTLI G+C +D
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 379 KLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
KLF M G D+ +YNTLI+ YC+ + AL ++ M+S+ + P ++T+ L GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 439 FEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNI 498
++E AL FD+MR + YN I GLCK+ V +A ELF + + +
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 499 VSYNCLIDGL 508
+Y +I GL
Sbjct: 457 RTYTIMILGL 466
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 242/428 (56%), Gaps = 9/428 (2%)
Query: 82 INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
I + +++L +F +M++ P P ++ F+ L ++K K YD V+ L++++ G+ +
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
+ T +IL+NCFC+ ++S LG++++ P+ VTF SL+ G C R+ +A +F
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTII 260
+ +P+V YNT+I+GLC++ AL+L M +G G P+ VTYN++I
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDVVTYNSLI 228
Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
GLC G A + M I PDV T+ ++I +EA+ + EM+ + +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
PD+VT+S+++ LC ++D+A + M+ +G P+ TY+ LI+GYC + K++H KL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
F M G + + V+Y LI YC+ + A ++ M+ G+ P ++TYN L GL +
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
++E+AL + +M++N + AD TYN I G+CK+G V +A +++ ++ +I +
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 501 YNCLIDGL 508
Y ++ GL
Sbjct: 469 YTTMMLGL 476
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 176/338 (52%), Gaps = 7/338 (2%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
+AL +FD M+ M P V +N + L K+K D L L R+ G+ PD+ T++ L
Sbjct: 169 DALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I+ C GR S ++ + + P+ TF +LI E R+ EA + + +
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
+PD+ TY+ LI GLC A +F M + C P+ VTY+ +I+G CK
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKK 341
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
V+ +LF +M + + VTYT +I+G+C A N A+ +F M+ GV P+++T++V
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
++ LC NGK++KA +L M G++ + TYN +I G C ++ A ++ S+ G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
M D+ +Y T++ K EA +L+ +M GI P
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 246/453 (54%), Gaps = 33/453 (7%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
NEAL +F +M+ P P + F L +AK K +D V++L L G+ D+YT ++
Sbjct: 54 NEALDLFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
L+NCFC+ + LG++++ F P+ VTFTSLI G C +R+ EA ++ +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------- 248
+PDV Y T+I+ LC+ GH AL+LF++M N VV
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 249 ----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
KP+ +T+N +ID KEG A+EL+ +M +I P++ TYTS+I GF
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
C +EA+++F M +G PDVV ++ +++ CK K+D A ++ M +G+ NT
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
TY TLI G+ K + A+++F M S G ++ +YN L++ C N V++AL ++ +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 419 MLSK---GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
M + G+ P + TYN L GL ++E+AL +F++MR+ + TY I G+CK
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+G V A+ LF ++ + N+V+Y +I GL
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 198/375 (52%), Gaps = 10/375 (2%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA+ + + M+ M P V + + L KN H + LSLF ++ + G+ PD+ ++ L
Sbjct: 160 EAMSMVNQMVEMGIKPD-VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
+N C GR +L + + P+ +TF +LI E + ++A L+ + +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
P++FTY +LING C G A +F M C P+ V Y ++I+G CK
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKK 332
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
VD A ++F +M + + + +TYT++I+GF N A+ +F M+ +GV P++ T++V
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 329 IMDELCKNGKMDKASRLLELMIWR---GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
++ LC NGK+ KA + E M R GV PN +TYN L+ G C K++ A +F M
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
+++Y +I CK V+ A++L+ + SKG+KP VVTY T+ GLF
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 446 RALKLFDEMRRNHVA 460
A LF +M+ + V+
Sbjct: 513 EAHVLFRKMKEDGVS 527
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%)
Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
Y ++R ++ +NEA LF M++ P ++ F+ +++ + K K D L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
GV+ + YT N L++ +C + + A M G D+V++ +LIN +C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
EA+S+ ++M+ GIKP VV Y T+ L + V AL LFD+M + D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+GLC SG +A L R + K + +++++N LID
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 3/173 (1%)
Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
+GK SRLL+L W N Y ++ + + + A LF M + + ++
Sbjct: 18 SGKALSFSRLLDLSFWVRAFCN---YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
+ L+N K K + ++L + G+ + T N L + Q A +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ D T+ + I+G C + EA+ + + + + ++V Y +ID L
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 255 bits (651), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 209/368 (56%), Gaps = 6/368 (1%)
Query: 140 PDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
PD++ ++ LIN FCKM R+ VL R+ F+P+ VT+ +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTI 259
+ C+P V TY LI G AL L +EM + KP+ TYNTI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGV 319
I G+CKEG VD+A E+ ++ + PDV++Y ++R W E ++L +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 320 QPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARK 379
P+VVT+S+++ LC++GK+++A LL+LM +G+ P+ Y+Y+ LI +C ++D A +
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 380 LFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLF 439
+M S+GC+ D+V+YNT++ CKN ++AL ++ ++ G P +YNT+F L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 440 EIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIV 499
RAL + EM N + D TYN+ I LC+ G V EA EL +R ++ ++V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 500 SYNCLIDG 507
+YN ++ G
Sbjct: 510 TYNIVLLG 517
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 200/399 (50%), Gaps = 9/399 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A + D M SP V+ +NI+ G L D L + +L S P + T++I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI G V ++ +L P+ T+ ++I+G+C E + A + +
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
CEPDV +YN L+ L G L +M F C PN VTY+ +I LC++G
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKM------FSEKCDPNVVTYSILITTLCRDG 347
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+++A L MK++ + PD +Y +I FC + A M+ G PD+V ++
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG-YCLTDKIDHARKLFVSMES 386
++ LCKNGK D+A + + G +PN+ +YNT+ + DKI A + + M S
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI-RALHMILEMMS 466
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
NG D ++YN++I+ C+ V+EA L +M S P+VVTYN + LG + H++E
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALEL 485
A+ + + M N + TY I+G+ +G+ EA+EL
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 6/404 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++N L K D + R+ S PD T++I+I C G++ V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L ++L P +T+T LI+ E + EA L + +PD+FTYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G A + + C+P+ ++YN ++ L +G ++ ++L KM E
Sbjct: 276 EGMVDRAFEMVRNLELKG------CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
+P+VVTY+ +I C EA L M ++G+ PD ++ ++ C+ G++D A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
LE MI G P+ YNT++ C K D A ++F + GC + SYNT+ +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
+ D AL + EM+S GI P +TYN++ L V+ A +L +MR
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
TYN + G CK+ + +A+ + ++ + N +Y LI+G+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 248/454 (54%), Gaps = 11/454 (2%)
Query: 55 SLRLTVKDRASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 114
SLR+ S + +ER +S ++ I N+AL +F M HP P V F+ L
Sbjct: 32 SLRICNSRAFSGRSDYRERLRSG----LHSIKFNDALTLFCDMAESHPLPSIVD-FSRLL 86
Query: 115 GCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFT 174
+AK Y+ V+SLF+ L G+ D+Y+ + LI+CFC+ R+S LG++++ F
Sbjct: 87 IAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE 146
Query: 175 PNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNL 234
P+ VTF SL+ G C +R EA +L + EP+V YNT+I+ LC G AL++
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206
Query: 235 FEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSV 294
+ M + G+ +P+ VTYN++I L G + + M I+PDV+T++++
Sbjct: 207 LKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 295 IRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGV 354
I + EAK+ + EM+ + V P++VT++ +++ LC +G +D+A ++L +++ +G
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALS 414
PN TYNTLI+GYC ++D K+ M +G D +YNTL YC+ A
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
+ M+S G+ P + T+N L GL + ++ +AL ++++++ TYN I GLC
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 475 KSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
K+ V +A LF ++ ++++Y ++ GL
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + ++N L L + D + L S G FP+ T++ LIN +CK RV G +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L + R + T+ +L +G C + A + + PD++T+N L++GLC
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G AL E++ G++ TYN II GLCK V+ A LF + + +
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGII------TYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMM-DQGVQP 321
+PDV+TY +++ G W EA L+ +M + G+ P
Sbjct: 461 SPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 227/421 (53%), Gaps = 7/421 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
N+AL +F M+ P P + F L +AK YD V+SLF+++ G+ P + T +I
Sbjct: 65 NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+++C C + LG++++ F P+ VTFTSL+ G C +RI +A ALF +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
+P+V TY TLI LC+ H A+ LF +M NG +PN VTYN ++ GLC+ G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIG 237
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
A L M I P+V+T+T++I F EAK L+ M+ V PDV T+
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
+++ LC G +D+A ++ LM G PN Y TLI G+C + +++ K+F M
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
G + + ++Y LI YC + A ++++M S+ P + TYN L GL +VE+A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
L +F+ MR+ + + TY I G+CK G V +A +LF ++ + N+++Y +I G
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 508 L 508
Sbjct: 478 F 478
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 187/343 (54%), Gaps = 7/343 (2%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
+A+ +FD +L M P V ++ L CL KN+H + + LF ++ + G P++ T++ L
Sbjct: 171 DAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
+ C++GR +L +++ PN +TFT+LI ++MEA L+ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
PDVFTY +LINGLC G A +F M NG C PN V Y T+I G CK
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCKSKR 343
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
V+ ++F +M + + + +TYT +I+G+C + A+ +F +M + PD+ T++V
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
++D LC NGK++KA + E M R ++ N TY +I G C K++ A LF S+ S G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
+V++Y T+I+ +C+ + EA SL+ +M G P Y
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 222/440 (50%), Gaps = 42/440 (9%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS------------------ 146
P VS+FN+L L + + + + + S GL PD T +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 147 -----------------ILINCFCKMGRVSHGFVVLGRIL-RSCFTPNAVTFTSLIKGLC 188
++++ FCK GRV + + + F P+ TF +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
+ A + +PDV+TYN++I+GLC+ G A+ + ++M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360
Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
C PNTVTYNT+I LCKE V++A EL + + I PDV T+ S+I+G C + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
LF EM +G +PD T+++++D LC GK+D+A +L+ M G + TYNTLIDG+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
C +K A ++F ME +G + V+YNTLI+ CK++ VE+A L +M+ +G KP
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
TYN+L +++A + M N D TY I GLCK+G V A +L R+
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 489 IRDSKYELNIVSYNCLIDGL 508
I+ L +YN +I GL
Sbjct: 601 IQMKGINLTPHAYNPVIQGL 620
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 215/406 (52%), Gaps = 8/406 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P +FN L L K H + + + G PD+YT++ +I+ CK+G V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L +++ +PN VT+ +LI LC E+++ EA L PDV T+N+LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
T + VA+ LFEEM + C+P+ TYN +ID LC +G +D+A + +M+
Sbjct: 413 TRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
V+TY ++I GFC AN EA+ +F EM GV + VT++ ++D LCK+ +++ A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
L++ MI G P+ YTYN+L+ +C I A + +M SNGC D+V+Y TLI+ C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM-RRNHVAADT 463
K VE A L + KGI T YN + GLF + A+ LF EM +N D
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 464 YTYNNFIDGLCKSGF-VLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+Y GLC G + EA++ + + + S L +GL
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 219/418 (52%), Gaps = 5/418 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+E L + D+M+ P +N + L V +++ G+ PD+ T ++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI C+ ++ ++L + P+ TFT++++G E + A + + F
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C + N +++G C+ G ALN +EM+N +G F P+ T+NT+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
V A E+ M E +PDV TY SVI G C + EA + +M+ + P+ VT++
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ LCK ++++A+ L ++ +G+ P+ T+N+LI G CLT A +LF M S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
GC D +YN LI+ C ++EAL++ +M G +V+TYNTL G + ++ A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
++FDEM + V+ ++ TYN IDGLCKS V +A +L + + + +YN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 10/312 (3%)
Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
L +K F+ EP + Y ++ L R+G + E+M + E G T T+
Sbjct: 72 LASKKPNFSPEPAL--YEEILLRLGRSGSFDDMKKILEDMKSSRCEMG------TSTFLI 123
Query: 259 IIDGLCKEGFVDKAKELFLKMKDE-NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ 317
+I+ + D+ + M DE + PD Y ++ N + +M
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
G++PDV TF+V++ LC+ ++ A +LE M G+ P+ T+ T++ GY +D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFL 436
++ M GC VS N +++ +CK VE+AL+ EM ++ G P T+NTL
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
GL + V+ A+++ D M + D YTYN+ I GLCK G V EA+E+ +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 497 NIVSYNCLIDGL 508
N V+YN LI L
Sbjct: 364 NTVTYNTLISTL 375
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 226/421 (53%), Gaps = 7/421 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ + + M++ P ++ +IL G + + + + K++ S G+ PD+ T+S+
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI-GFLKKMRSDGVEPDVVTYSL 306
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
L++ CK GR + + + P T+ +L++G + ++E L
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
PD + ++ LI + G A+ +F +M PN VTY +I LCK G
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPNAVTYGAVIGILCKSG 420
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
V+ A F +M DE ++P + Y S+I G C N W A+ L +EM+D+G+ + + F+
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
I+D CK G++ ++ +L ELM+ GV PN TYNTLI+GYCL K+D A KL M S
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
G + V+Y+TLIN YCK +E+AL L+ EM S G+ P ++TYN + GLF+ + A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+L+ + + + TYN + GLCK+ +AL++F+ + +L ++N +ID
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 508 L 508
L
Sbjct: 661 L 661
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 238/492 (48%), Gaps = 77/492 (15%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYTH 145
+A +FD +LR + N +A++ V S + R+ AG + PD+ T+
Sbjct: 33 DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTY 90
Query: 146 SILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
ILI C C+ GR+ GF LG +++ F +A+ FT L+KGLCA+ R +A + +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 206 -FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG--------------------- 243
C P+VF+YN L+ GLC + AL L MA+ G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 244 -------------EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
+ G++ P+ VTYN+II LCK +DKA E+ M + PD +T
Sbjct: 211 DSDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
Y S++ G+C + EA +M GV+PDVVT+S++MD LCKNG+ +A ++ + M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 351 WRGVNPNTYTYNTLIDGYC----------LTD-------------------------KID 375
RG+ P TY TL+ GY L D K+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
A +F M G + V+Y +I CK+ VE+A+ + +M+ +G+ P + YN+L
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
GL ++ ERA +L EM + +T +N+ ID CK G V+E+ +LF + +
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 496 LNIVSYNCLIDG 507
N+++YN LI+G
Sbjct: 509 PNVITYNTLING 520
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 216/433 (49%), Gaps = 14/433 (3%)
Query: 76 SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
SSGQ P EA+ M R P V ++++L L KN +F +
Sbjct: 278 SSGQ-------PKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 136 AGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIME 195
GL P+I T+ L+ + G + +L ++R+ P+ F+ LI + ++ +
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389
Query: 196 AAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 255
A +F+K R P+ TY +I LC++G A+ FE+M + P +
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG------LSPGNIV 443
Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
YN++I GLC ++A+EL L+M D I + + + S+I C E+++LF M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
GV+P+V+T++ +++ C GKMD+A +LL M+ G+ PNT TY+TLI+GYC +++
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
A LF MES+G D+++YN ++ + + A LY + G + + TYN +
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
GL + + AL++F + + + T+N ID L K G EA +LF A +
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Query: 496 LNIVSYNCLIDGL 508
N +Y + + +
Sbjct: 684 PNYWTYRLMAENI 696
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 206/404 (50%), Gaps = 7/404 (1%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA IFD M + P ++++ L A + L + G+ PD Y SIL
Sbjct: 319 EARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I + K G+V +V ++ + PNAVT+ ++I LC R+ +A F +
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
P YN+LI+GLC A L EM + +C NT+ +N+IID CKEG
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGR 491
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
V ++++LF M + P+V+TY ++I G+C A +EA +L M+ G++P+ VT+S
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
+++ CK +M+ A L + M GV+P+ TYN ++ G T + A++L+V + +G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
++ +YN +++ CKNK ++AL ++ + +K T+N + L ++ + + A
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
LF N + + +TY + + G + E +LF ++ D+
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 191/420 (45%), Gaps = 19/420 (4%)
Query: 93 IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
+ D M+R +HP F+IL AK D + +F ++ GL P+ T+ +I
Sbjct: 358 LLDLMVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
CK GRV + +++ +P + + SLI GLC ++ A L +
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
+ +N++I+ C+ G I + LFE M GV KPN +TYNT+I+G C G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528
Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
+A +L M + P+ VTY+++I G+C + +A LF EM GV PD++T+++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
L + + A L + G TYN ++ G C D A ++F N C+
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLCL 644
Query: 391 HDVV----SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
D+ ++N +I+ K +EA L+ S G+ P TY + + +E
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
+LF M N D+ N + L + G + A I + + L + + ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 93 IFDYMLRMHPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
+F+ M+R+ P ++ ++ G CLA D + L + S GL P+ T+S LIN
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYSTLING 555
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
+CK+ R+ V+ + S +P+ +T+ +++GL R A L+ + + +
Sbjct: 556 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEM---------------------ANGNGEF----- 245
+ TYN +++GLC+ T AL +F+ + N E
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 246 -----GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCY 300
G+V PN TY + + + +G +++ +LFL M+D D ++R
Sbjct: 676 AFSSNGLV--PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 301 ANDWNEAKRLFIEMMDQG-VQPDVVTFSVIMDELCKNGKMDKASRLL 346
+ A ++ M+D+ + T S+ +D L GK + R L
Sbjct: 734 RGEITRAGT-YLSMIDEKHFSLEASTASLFID-LLSGGKYQEYYRFL 778
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 245/445 (55%), Gaps = 11/445 (2%)
Query: 64 ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHY 123
AS +ER ++ +++ I ++A +F ML+ P P V F + +AK +
Sbjct: 41 ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKF 95
Query: 124 DTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSL 183
D V+ L+ ++ + G+ D+Y+ +ILI+CFC+ R+S +LG++++ F P+ VT SL
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 184 IKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 243
+ G C +R EA +L F P+V YNT+INGLC+ AL +F M
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG- 214
Query: 244 EFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
+ + VTYNT+I GL G A L M I+P+V+ +T++I F +
Sbjct: 215 -----IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
EA+ L+ EM+ + V P+V T++ +++ C +G + A + +LM+ +G P+ TYNT
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
LI G+C + +++ KLF M G + D +YNTLI+ YC+ + A +++ M+ G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
+ P +VTYN L L ++E+AL + ++++++ + D TYN I GLC++ + EA
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 484 ELFRAIRDSKYELNIVSYNCLIDGL 508
LFR++ + + ++Y +I GL
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGL 474
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 174/328 (53%), Gaps = 6/328 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V +N + L KN+ + L +F + G+ D T++ LI+ GR + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L +++ PN + FT+LI E ++EA L+ + + P+VFTYN+LING C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G A +F+ M + C P+ VTYNT+I G CK V+ +LF +M + +
Sbjct: 302 HGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
D TY ++I G+C A N A+++F M+D GV PD+VT+++++D LC NGK++KA
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
++E + ++ + TYN +I G C TDK+ A LF S+ G D ++Y T+I+ C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYN 432
+ EA L M G P+ Y+
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++N L K+K + + LF + GL D +T++ LI+ +C+ G+++ V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
R++ +P+ VT+ L+ LC +I +A + + + D+ TYN +I GLCR
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
T A LF + GV KP+ + Y T+I GLC++G +A +L +MK++
Sbjct: 442 TDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 285 NPDVVTYTSVIR 296
P Y +R
Sbjct: 496 MPSERIYDETLR 507
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 231/422 (54%), Gaps = 8/422 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
++AL I ++ + H P V S+N +L + ++ ++FK + + + P+++T++
Sbjct: 151 DKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
ILI FC G + + ++ PN VT+ +LI G C +I + L +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
EP++ +YN +INGLCR G + EM N G + VTYNT+I G CKE
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRG-----YSLDEVTYNTLIKGYCKE 323
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
G +A + +M + P V+TYTS+I C A + N A +M +G+ P+ T+
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
+ ++D + G M++A R+L M G +P+ TYN LI+G+C+T K++ A + M+
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
G DVVSY+T+++ +C++ DV+EAL + EM+ KGIKP +TY++L G E + +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
A L++EM R + D +TY I+ C G + +AL+L + + ++V+Y+ LI+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 507 GL 508
GL
Sbjct: 564 GL 565
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 220/416 (52%), Gaps = 11/416 (2%)
Query: 93 IFDYMLRMHPSPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILIN 150
+F ML SP V ++NIL C A N D L+LF ++ + G P++ T++ LI+
Sbjct: 192 VFKEMLESQVSPN-VFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP 210
+CK+ ++ GF +L + PN +++ +I GLC E R+ E + + T+
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 211 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVD 270
D TYNTLI G C+ G+ AL + EM P+ +TY ++I +CK G ++
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG------LTPSVITYTSLIHSMCKAGNMN 362
Query: 271 KAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
+A E +M+ + P+ TYT+++ GF NEA R+ EM D G P VVT++ ++
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
+ C GKM+ A +LE M +G++P+ +Y+T++ G+C + +D A ++ M G
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
D ++Y++LI +C+ + +EA LY EML G+ P TY L +E+AL+L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
+EM V D TY+ I+GL K EA L + + + V+Y+ LI+
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 195/427 (45%), Gaps = 56/427 (13%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + S+N++ L + V + +N G D T++ LI +CK G V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+LR TP+ +T+TSLI +C + A + RV P+ TY TL++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G+ A + EM N NG P+ VTYN +I+G C G ++ A + MK++ +
Sbjct: 393 KGYMNEAYRVLREM-NDNG-----FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
+PDVV+Y++V+ GFC + D +EA R+ EM+++G++PD +T+S ++ C+ + +A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINW-- 402
L E M+ G+ P+ +TY LI+ YC+ ++ A +L M G + DVV+Y+ LIN
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 403 ------------------------------------------------YCKNKDVEEALS 414
+C + EA
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 415 LYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLC 474
++ ML K KP YN + G + +A L+ EM ++ T T + L
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 475 KSGFVLE 481
K G V E
Sbjct: 687 KEGKVNE 693
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 196/372 (52%), Gaps = 22/372 (5%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++AL + MLR H P V ++ L + K + + + ++ GL P+ T++
Sbjct: 327 HQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
L++ F + G ++ + VL + + F+P+ VT+ +LI G C ++ +A A+ +
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
PDV +Y+T+++G CR+ AL + EM E G+ KP+T+TY+++I G C++
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMV----EKGI--KPDTITYSSLIQGFCEQR 499
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+A +L+ +M + PD TYT++I +C D +A +L EM+++GV PDVVT+S
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID---------------GYCLTD 372
V+++ L K + +A RLL + + P+ TY+TLI+ G+C+
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
+ A ++F SM D +YN +I+ +C+ D+ +A +LY EM+ G VT
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 433 TLFLGLFEIHQV 444
L L + +V
Sbjct: 680 ALVKALHKEGKV 691
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 21/341 (6%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++N L + +++ + + GL PD+ ++S +++ FC+ V V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
++ P+ +T++SLI+G C + R EA L+ + PD FTY LIN C
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G AL L EM E GV+ P+ VTY+ +I+GL K+ +AK L LK+ E
Sbjct: 533 EGDLEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 285 NPDVVTY---------------TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
P VTY S+I+GFC EA ++F M+ + +PD ++++
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
+ C+ G + KA L + M+ G +T T L+ K++ + V + +
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCE 706
Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVT 430
+ + L+ + +++ L + +EM G P ++
Sbjct: 707 LSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLID------------------- 366
F +++ + +DKA ++ L G P +YN ++D
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 367 -----------------GYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDV 409
G+C ID A LF ME+ GC+ +VV+YNTLI+ YCK + +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 410 EEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNF 469
++ L M KG++P +++YN + GL +++ + EM R + D TYN
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 470 IDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
I G CK G +AL + + ++++Y LI +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 239 bits (609), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 231/424 (54%), Gaps = 10/424 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAG---LFPDIYT 144
++A +F M +P P V FN + +AK + YD V++L+KR+ +A + PD+YT
Sbjct: 67 DDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYT 125
Query: 145 HSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHR 204
+IL+NCFC+ + S LG++++ P+ VT +SL+ G C + I +A + +
Sbjct: 126 CNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185
Query: 205 VFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLC 264
+ DV LI+ LC+ + AL + + M + PN VTY+++I GLC
Sbjct: 186 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLC 239
Query: 265 KEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVV 324
K G + A+ +M + INP+V+T++++I + ++ ++ M+ + P+V
Sbjct: 240 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 299
Query: 325 TFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM 384
T+S ++ LC + ++D+A ++L+LMI +G PN TY+TL +G+ + ++D KL M
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359
Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQV 444
G + VS NTLI Y + ++ AL ++ M S G+ P + +YN + GLF +V
Sbjct: 360 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 445 ERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCL 504
E+AL F+ M++ D TY I G+CK+ V EA +LF ++ + E + +Y +
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 479
Query: 505 IDGL 508
I L
Sbjct: 480 IAEL 483
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 5/260 (1%)
Query: 253 TVTYNTII-DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
T+ Y ++ GL F D A LF+ M P +V + V+ ++ L+
Sbjct: 50 TIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108
Query: 312 IEMMD-QGVQ--PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
+ + +G++ PD+ T +++++ C+ + A L M+ G+ P+ T ++L++G+
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGF 168
Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
CL++ I A + ME G DVV LI+ CKN+ V AL + M +GI P V
Sbjct: 169 CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 228
Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
VTY++L GL + ++ A + EM + + T++ ID K G + + +++
Sbjct: 229 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 288
Query: 489 IRDSKYELNIVSYNCLIDGL 508
+ + N+ +Y+ LI GL
Sbjct: 289 MIQMSIDPNVFTYSSLIYGL 308
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 39/202 (19%)
Query: 346 LELMIW-RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME------------------S 386
L W R + T Y ++ K D A LFV M +
Sbjct: 37 LRFRFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIA 96
Query: 387 NGCMHDVV--------------------SYNTLINWYCKNKDVEEALSLYSEMLSKGIKP 426
M+DVV + N L+N +C+ ALS +M+ GI+P
Sbjct: 97 KMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEP 156
Query: 427 TVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
+VT ++L G + ++ A+ + +M + + D ID LCK+ V+ ALE+
Sbjct: 157 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 216
Query: 487 RAIRDSKYELNIVSYNCLIDGL 508
+ ++D N+V+Y+ LI GL
Sbjct: 217 KRMKDRGISPNVVTYSSLITGL 238
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 189/361 (52%), Gaps = 6/361 (1%)
Query: 130 FKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCA 189
F + G+ PD ++ LI+ FCK G + + TP+ +T+T++I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
++EA LF + EPD T+ LING C+ GH A + M C
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------C 452
Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
PN VTY T+IDGLCKEG +D A EL +M + P++ TY S++ G C + + EA +
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
L E G+ D VT++ +MD CK+G+MDKA +L+ M+ +G+ P T+N L++G+C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
L ++ KL M + G + ++N+L+ YC +++ A ++Y +M S+G+ P
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
TY L G + ++ A LF EM+ + TY+ I G K LEA E+F +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 490 R 490
R
Sbjct: 693 R 693
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 206/383 (53%), Gaps = 7/383 (1%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA F M+R P V + L K F ++S + PD+ T++ +
Sbjct: 334 EAEEAFSEMIRQGILPDTVV-YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I+ FC++G + + + P++VTFT LI G C + +A + C
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
P+V TY TLI+GLC+ G A L EM + + +PN TYN+I++GLCK G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
+++A +L + + +N D VTYT+++ +C + + ++A+ + EM+ +G+QP +VTF+V
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
+M+ C +G ++ +LL M+ +G+ PN T+N+L+ YC+ + + A ++ M S G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
D +Y L+ +CK ++++EA L+ EM KG +V TY+ L G + + A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 449 KLFDEMRRNHVAADTYTYNNFID 471
++FD+MRR +AAD ++ F D
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSD 709
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 214/412 (51%), Gaps = 6/412 (1%)
Query: 97 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
++ + P V S++ + + D V L + + GL P+ Y + +I C++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
+++ ++R P+ V +T+LI G C I A+ F + PDV TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
+I+G C+ G + A LF EM F +P++VT+ +I+G CK G + A +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
M +P+VVTYT++I G C D + A L EM G+QP++ T++ I++ LCK+
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
G +++A +L+ G+N +T TY TL+D YC + ++D A+++ M G +V++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
N L+N +C + +E+ L + ML+KGI P T+N+L + ++ A ++ +M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
V D TY N + G CK+ + EA LF+ ++ + +++ +Y+ LI G
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 176/333 (52%), Gaps = 6/333 (1%)
Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
N ++ +I +C RI EA L + PDV +Y+T++NG CR G L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
E M KPN+ Y +II LC+ + +A+E F +M + I PD V YT++I
Sbjct: 305 EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
GFC D A + F EM + + PDV+T++ I+ C+ G M +A +L M +G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
P++ T+ LI+GYC + A ++ M GC +VV+Y TLI+ CK D++ A L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
EM G++P + TYN++ GL + +E A+KL E + ADT TY +D CK
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
SG + +A E+ + + + IV++N L++G
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 7/317 (2%)
Query: 193 IMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKP 251
+ EA +F K + V + N + L + + T A+ +F E E GV
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP----EVGVCW-- 244
Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
N +YN +I +C+ G + +A L L M+ + PDV++Y++V+ G+C + ++ +L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
M +G++P+ + I+ LC+ K+ +A MI +G+ P+T Y TLIDG+C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
I A K F M S DV++Y +I+ +C+ D+ EA L+ EM KG++P VT+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
L G + ++ A ++ + M + + + TY IDGLCK G + A EL +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 492 SKYELNIVSYNCLIDGL 508
+ NI +YN +++GL
Sbjct: 485 IGLQPNIFTYNSIVNGL 501
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 8/237 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + ++N + L K+ + + + L +AGL D T++ L++ +CK G + +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L +L P VTF L+ G C + + L P+ T+N+L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 225 TGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
+ A ++++M + G G P+ TY ++ G CK + +A LF +MK +
Sbjct: 609 RNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
+ V TY+ +I+GF + EA+ +F +M +G+ D F D K + D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 216/401 (53%), Gaps = 9/401 (2%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
+S+FN L L K L ++ G+ P+++T+++ I C+ G + ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
++ P+ +T+ +LI GLC S+ EA K EPD +TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 227 HTIVALNLFEEMANGNGEF-GVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
+A E G+ F G V P+ TY ++IDGLC EG ++A LF + + I
Sbjct: 336 MVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
P+V+ Y ++I+G EA +L EM ++G+ P+V TF+++++ LCK G + A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK 405
+++MI +G P+ +T+N LI GY K+++A ++ M NG DV +YN+L+N CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 406 NKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
E+ + Y M+ KG P + T+N L L +++ AL L +EM+ V D T
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 466 YNNFIDGLCKSGFVLEALELFRAIRDS-KYELNIVSYNCLI 505
+ IDG CK+G + A LFR + ++ K + +YN +I
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 200/396 (50%), Gaps = 15/396 (3%)
Query: 97 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
++ P P ++ N+++G L KN + ++ + GL PD YT++ LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYG-LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
V ++G + + F P+ T+ SLI GLC E A ALF + +P+V YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELF 276
TLI GL G + A L EM+ E G++ P T+N +++GLCK G V A L
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
M + PD+ T+ +I G+ A + M+D GV PDV T++ +++ LCK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
K + + M+ +G PN +T+N L++ C K+D A L M++ D V++
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 397 NTLINWYCKNKDVEEALSLYSEMLSK-GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
TLI+ +CKN D++ A +L+ +M + + TYN + E V A KLF EM
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 456 RNHVAADTYTYNNFIDGLCKSG-------FVLEALE 484
+ D YTY +DG CK+G F+LE +E
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 214/456 (46%), Gaps = 42/456 (9%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
EA+ +F+ M + P V S+N + L + ++D ++ R+ G+ PD+Y+ +I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 148 LINCFCKMGR-----------------------------------VSHGFVVLGRILRSC 172
+ FCK R + G+ + G++L S
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
+ TF L++ LC + + E L K P++FTYN I GLC+ G A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 233 NLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYT 292
+ + KP+ +TYN +I GLCK +A+ KM +E + PD TY
Sbjct: 272 RMVGCLIEQGP------KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 293 SVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWR 352
++I G+C A+R+ + + G PD T+ ++D LC G+ ++A L + +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
G+ PN YNTLI G I A +L M G + +V ++N L+N CK V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 413 LSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDG 472
L M+SKG P + T+N L G ++E AL++ D M N V D YTYN+ ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 473 LCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
LCK+ + +E ++ + + N+ ++N L++ L
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 29/385 (7%)
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
+ + G+V V R+ P ++ +++ L +A ++ + R PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV----------------- 254
V+++ + C+T AL L M++ E VV V
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 255 ------------TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAN 302
T+N ++ LCK+G V + ++L K+ + P++ TY I+G C
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 303 DWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYN 362
+ + A R+ +++QG +PDV+T++ ++ LCKN K +A L M+ G+ P++YTYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 363 TLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSK 422
TLI GYC + A ++ NG + D +Y +LI+ C + AL+L++E L K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 423 GIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEA 482
GIKP V+ YNTL GL + A +L +EM + + T+N ++GLCK G V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 483 LELFRAIRDSKYELNIVSYNCLIDG 507
L + + Y +I ++N LI G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHG 470
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 163/335 (48%), Gaps = 12/335 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V +FNIL L K L K + S G FPDI+T +ILI+ + ++ + +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L +L + P+ T+ SL+ GLC S+ + + C P++FT+N L+ LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-N 283
AL L EEM N + P+ VT+ T+IDG CK G +D A LF KM++
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
++ TY +I F + A++LF EM+D+ + PD T+ +++D CK G ++
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
+ L M+ G P+ T +I+ C+ D++ A + M G + + V NT+ +
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICDV- 714
Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
+K A L E L K T Y LF GL
Sbjct: 715 --DKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 8/280 (2%)
Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVV- 289
AL +F M E G K TY ++I+ L G + +E+ + M+ EN+ ++
Sbjct: 23 ALEMFNSMRK---EVGF--KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR-ENVGNHMLE 76
Query: 290 -TYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
Y ++ + EA +F M +P V +++ IM L +G D+A ++
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
M RG+ P+ Y++ + +C T + A +L +M S GC +VV+Y T++ + +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 409 VEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNN 468
E L+ +ML+ G+ + T+N L L + V+ KL D++ + V + +TYN
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 469 FIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
FI GLC+ G + A+ + + + + ++++YN LI GL
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 90 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
A +F M + ++NI+ + + LF+ + L PD YT+ +++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV 205
+ FCK G V+ G+ L ++ + F P+ T +I LC E R+ EAA + HR+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII--HRM 698
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 219/433 (50%), Gaps = 30/433 (6%)
Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFV 163
PP + +F ++ D+ LSL + + G P+ + LI+ K RV+
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 164 VLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
+L + P+A TF +I GLC RI EAA + + + PD TY L+NGLC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 224 RTGHTIVALNLFEE----------------------------MANGNGEFGVVCKPNTVT 255
+ G A +LF +++ +G+V P+ T
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV--PDVCT 391
Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
YN++I G KEG V A E+ M+++ P+V +YT ++ GFC +EA + EM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
G++P+ V F+ ++ CK ++ +A + M +G P+ YT+N+LI G C D+I
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
HA L M S G + + V+YNTLIN + + +++EA L +EM+ +G +TYN+L
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
GL +V++A LF++M R+ A + N I+GLC+SG V EA+E + +
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 496 LNIVSYNCLIDGL 508
+IV++N LI+GL
Sbjct: 632 PDIVTFNSLINGL 644
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 215/422 (50%), Gaps = 12/422 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
NEAL + + M M P +FN + L K + + R+ G PD T+
Sbjct: 269 NEALQLLEEMFLMG-CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRV-F 206
L+N CK+GRV + RI + P V F +LI G R+ +A A+ + +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
PDV TYN+LI G + G +AL + +M N CKPN +Y ++DG CK
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG------CKPNVYSYTILVDGFCKL 437
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
G +D+A + +M + + P+ V + +I FC + EA +F EM +G +PDV TF
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
+ ++ LC+ ++ A LL MI GV NT TYNTLI+ + +I ARKL M
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
G D ++YN+LI C+ +V++A SL+ +ML G P+ ++ N L GL VE
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
A++ EM D T+N+ I+GLC++G + + L +FR ++ + V++N L+
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 507 GL 508
L
Sbjct: 678 WL 679
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 216/423 (51%), Gaps = 11/423 (2%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
P + + M ++ P S+N++ L + ++F + S + P ++T
Sbjct: 162 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
+++ FC + + +L + + PN+V + +LI L +R+ EA L + +
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
C PD T+N +I GLC+ +N +M N G P+ +TY +++GLCK
Sbjct: 282 GCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDITYGYLMNGLCKI 335
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQ-GVQPDVVT 325
G VD AK+LF ++ P++V + ++I GF ++AK + +M+ G+ PDV T
Sbjct: 336 GRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
++ ++ K G + A +L M +G PN Y+Y L+DG+C KID A + M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
++G + V +N LI+ +CK + EA+ ++ EM KG KP V T+N+L GL E+ +++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
AL L +M V A+T TYN I+ + G + EA +L + L+ ++YN LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 506 DGL 508
GL
Sbjct: 572 KGL 574
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 194/359 (54%), Gaps = 6/359 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A + M+ + P V ++N L K L + + + G P++Y+++I
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
L++ FCK+G++ + VL + PN V F LI C E RI EA +F +
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C+PDV+T+N+LI+GLC AL L +M + GVV NTVTYNT+I+ + G
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTVTYNTLINAFLRRG 543
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+ +A++L +M + D +TY S+I+G C A + ++A+ LF +M+ G P ++ +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++++ LC++G +++A + M+ RG P+ T+N+LI+G C +I+ +F +++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
G D V++NTL++W CK V +A L E + G P T++ L + ++R
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 136/276 (49%), Gaps = 10/276 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P FN L K + +F+ + G PD+YT + LI+ C++ + H +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEP-DVFTYNTLINGLC 223
L ++ N VT+ +LI I EA L + VF P D TYN+LI GLC
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLC 575
Query: 224 RTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE 282
R G A +LFE+M +G+ P+ ++ N +I+GLC+ G V++A E +M
Sbjct: 576 RAGEVDKARSLFEKMLRDGHA-------PSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 283 NINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKA 342
PD+VT+ S+I G C A + +F ++ +G+ PD VTF+ +M LCK G + A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 343 SRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHAR 378
LL+ I G PN T++ L+ + +D R
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 5/254 (1%)
Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
Y +I L G L ++MKDE I + S++R + A + RL +EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 315 MD-QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
+ +P +++V+++ L A+ + M+ R + P +T+ ++ +C ++
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
ID A L M +GC+ + V Y TLI+ K V EAL L EM G P T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
+ LGL + ++ A K+ + M A D TY ++GLCK G V A +LF I +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 494 YELNIVSYNCLIDG 507
IV +N LI G
Sbjct: 353 ----IVIFNTLIHG 362
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 138/327 (42%), Gaps = 39/327 (11%)
Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAK 273
Y LI L G L +M + G+V K + + +I+ K GF +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDE----GIVFKESL--FISIMRDYDKAGFPGQTT 166
Query: 274 ELFLKMKD-ENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
L L+M++ + P +Y V+ N A +F +M+ + + P + TF V+M
Sbjct: 167 RLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 226
Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
C ++D A LL M G PN+ Y TLI ++++ A +L M GC+ D
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF- 451
++N +I CK + EA + + ML +G P +TY L GL +I +V+ A LF
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 452 -------------------------------DEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
D + + D TYN+ I G K G V
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 481 EALELFRAIRDSKYELNIVSYNCLIDG 507
ALE+ +R+ + N+ SY L+DG
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDG 433
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 213/428 (49%), Gaps = 8/428 (1%)
Query: 82 INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPD 141
I+L EA+ F M R P S N L AK D V FK + AG P
Sbjct: 203 IDLGMLEEAIQCFSKMKRFRVFPK-TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
++T++I+I+C CK G V + + P+ VT+ S+I G R+ + F
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
+ + CEPDV TYN LIN C+ G + L + EM GNG KPN V+Y+T++D
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVD 375
Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
CKEG + +A + ++ M+ + P+ TYTS+I C + ++A RL EM+ GV+
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
+VVT++ ++D LC +M +A L M GV PN +YN LI G+ +D A +L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
++ G D++ Y T I C + +E A + +EM GIK + Y TL F+
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVS 500
L L DEM+ + T+ IDGLCK+ V +A++ F I D + N
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 501 YNCLIDGL 508
+ +IDGL
Sbjct: 616 FTAMIDGL 623
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 209/404 (51%), Gaps = 6/404 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P F+ LF L + + F ++ +FP + + L++ F K+G+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
++ + P T+ +I +C E + A LF + + PD TYN++I+G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G + FEEM + + C+P+ +TYN +I+ CK G + E + +MK +
Sbjct: 310 VGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
P+VV+Y++++ FC +A + +++M G+ P+ T++ ++D CK G + A R
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
L M+ GV N TY LIDG C +++ A +LF M++ G + ++ SYN LI+ +
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
K K+++ AL L +E+ +GIKP ++ Y T GL + ++E A + +EM+ + A++
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
Y +D KSG E L L +++ E+ +V++ LIDGL
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 7/382 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V S++ L K + + + GL P+ YT++ LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+L+ N VT+T+LI GLC R+ EA LF K P++ +YN LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ AL L E+ G G KP+ + Y T I GLC ++ AK + +MK+ I
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
+ + YT+++ + + + E L EM + ++ VVTF V++D LCKN + KA
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 345 LLELMIWR-GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
+ G+ N + +IDG C ++++ A LF M G + D +Y +L++
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
K +V EAL+L +M G+K ++ Y +L GL +Q+++A +EM + D
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 464 YTYNNFIDGLCKSGFVLEALEL 485
+ + + G + EA+EL
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 142/261 (54%)
Query: 248 VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
VC P ++ + L G +++A + F KMK + P + ++ F ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
KR F +M+ G +P V T+++++D +CK G ++ A L E M +RG+ P+T TYN++IDG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
+ ++D F M+ C DV++YN LIN +CK + L Y EM G+KP
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
VV+Y+TL + +++A+K + +MRR + + YTY + ID CK G + +A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 488 AIRDSKYELNIVSYNCLIDGL 508
+ E N+V+Y LIDGL
Sbjct: 427 EMLQVGVEWNVVTYTALIDGL 447
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 207/392 (52%), Gaps = 9/392 (2%)
Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTP 175
C+A+ D + LF ++ FP + T+++LI C R S ++ + + P
Sbjct: 299 CVAR--RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
N T+T LI LC++ + +A L + P+V TYN LING C+ G A+++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 236 EEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVI 295
E M + PNT TYN +I G CK V KA + KM + + PDVVTY S+I
Sbjct: 417 ELMESRK------LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 296 RGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVN 355
G C + +++ A RL M D+G+ PD T++ ++D LCK+ ++++A L + + +GVN
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 356 PNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
PN Y LIDGYC K+D A + M S C+ + +++N LI+ C + ++EA L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 416 YSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCK 475
+M+ G++PTV T L L + + A F +M + D +TY FI C+
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 476 SGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
G +L+A ++ +R++ ++ +Y+ LI G
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 208/402 (51%), Gaps = 7/402 (1%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
+ +N L LA+ D + ++ + + P+IYT++ ++N +CK+G V +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
+I+ + P+ T+TSLI G C + A +F + + C + Y LI+GLC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
A++LF +M + C P TY +I LC +A L +M++ I P
Sbjct: 303 RIDEAMDLFVKMKDDE------CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
++ TYT +I C + +A+ L +M+++G+ P+V+T++ +++ CK G ++ A ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
ELM R ++PNT TYN LI GYC ++ + A + M + DVV+YN+LI+ C++
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
+ + A L S M +G+ P TY ++ L + +VE A LFD + + V + Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
IDG CK+G V EA + + N +++N LI GL
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 198/404 (49%), Gaps = 7/404 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++ +L L ++ L+L K + G+ P+I+T+++LI+ C + +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
LG++L PN +T+ +LI G C I +A + P+ TYN LI G C+
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ N+ + M N P+ VTYN++IDG C+ G D A L M D +
Sbjct: 441 S-------NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
PD TYTS+I C + EA LF + +GV P+VV ++ ++D CK GK+D+A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
+LE M+ + PN+ T+N LI G C K+ A L M G V + LI+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
K+ D + A S + +MLS G KP TY T ++ A + +MR N V+ D +
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
TY++ I G G A ++ + +RD+ E + ++ LI L
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 199/422 (47%), Gaps = 25/422 (5%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P ++ + L K+K + LF L G+ P++ ++ LI+ +CK G+V ++
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L ++L PN++TF +LI GLCA+ ++ EA L K +P V T LI+ L +
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G A + F++M + KP+ TY T I C+EG + A+++ KM++ +
Sbjct: 615 DGDFDHAYSRFQQMLSSG------TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD------------- 331
+PD+ TY+S+I+G+ N A + M D G +P TF ++
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 332 --ELCKNGKM---DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
ELC M D LLE M+ V PN +Y LI G C + A K+F M+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 387 N-GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
N G + +N L++ CK K EA + +M+ G P + + L GL++ + E
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKE 848
Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
R +F + + D + IDG+ K G V ELF + + + + +Y+ LI
Sbjct: 849 RGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Query: 506 DG 507
+G
Sbjct: 909 EG 910
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 191/430 (44%), Gaps = 50/430 (11%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + ++ +L L ++ L ++ GL P++ T++ LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+ + +PN T+ LIKG C +S + +A + K PDV TYN+LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 225 TGHTIVALNLFEEMANGNG----------EFGVVCK--------------------PNTV 254
+G+ A L M N G +CK PN V
Sbjct: 475 SGNFDSAYRLLSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 255 TYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEM 314
Y +IDG CK G VD+A + KM +N P+ +T+ ++I G C EA L +M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 315 MDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKI 374
+ G+QP V T ++++ L K+G D A + M+ G P+ +TY T I YC ++
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 375 DHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
A + M NG D+ +Y++LI Y A + M G +P+ T+ +L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 435 FLGLFEIH------------------QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKS 476
L E+ + + ++L ++M + V + +Y I G+C+
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 477 GFVLEALELF 486
G + A ++F
Sbjct: 774 GNLRVAEKVF 783
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 180/366 (49%), Gaps = 17/366 (4%)
Query: 142 IYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFT 201
+Y+++ L+ G V F + +++SC ++V + LC + E L
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLMIKSC---DSVGDALYVLDLCRKMNKDERFELKY 179
Query: 202 KHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIID 261
K + C YNTL+N L R G ++ EM VC PN TYN +++
Sbjct: 180 K-LIIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDK-----VC-PNIYTYNKMVN 226
Query: 262 GLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQP 321
G CK G V++A + K+ + ++PD TYTS+I G+C D + A ++F EM +G +
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 322 DVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLF 381
+ V ++ ++ LC ++D+A L M P TY LI C +++ A L
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 382 VSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEI 441
ME G ++ +Y LI+ C E+A L +ML KG+ P V+TYN L G +
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 442 HQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSY 501
+E A+ + + M ++ +T TYN I G CKS V +A+ + + + K ++V+Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 502 NCLIDG 507
N LIDG
Sbjct: 466 NSLIDG 471
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 51/129 (39%)
Query: 93 IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
+FD+M R P FN L C K K ++ + + G P + + +LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
K G G V +L+ + + + + +I G+ + + LF C+
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 213 FTYNTLING 221
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 223/428 (52%), Gaps = 14/428 (3%)
Query: 88 NEALCIFDYM----LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIY 143
+ L +DY+ + M+ SP +S FN++ L K + D + +F+ + PD Y
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLS-FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 144 THSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKH 203
T+ L++ CK R+ ++L + +P+ V + LI GLC + + L
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
+ C P+ TYNTLI+GLC G A++L E M + C PN VTY T+I+GL
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGL 337
Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
K+ A L M++ + + Y+ +I G EA L+ +M ++G +P++
Sbjct: 338 VKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI 397
Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVS 383
V +SV++D LC+ GK ++A +L MI G PN YTY++L+ G+ T + A +++
Sbjct: 398 VVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457
Query: 384 MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQ 443
M+ GC + Y+ LI+ C V+EA+ ++S+ML+ GIKP V Y+++ GL I
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 444 VERALKLFDEM---RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
++ ALKL+ EM D TYN +DGLC + A++L ++ D + ++++
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Query: 501 YNCLIDGL 508
N ++ L
Sbjct: 578 CNTFLNTL 585
Score = 188 bits (477), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 204/421 (48%), Gaps = 31/421 (7%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ + D M SP PV +N+L L K V L + G P+ T++
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI+ C G++ +L R++ S PN VT+ +LI GL + R +A L +
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
+ Y+ LI+GL + G A++L+ +MA CKPN V Y+ ++DGLC+EG
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG------CKPNIVVYSVLVDGLCREG 411
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
++AKE+ +M P+ TY+S+++GF EA +++ EM G + +S
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--- 384
V++D LC G++ +A + M+ G+ P+T Y+++I G C +D A KL+ M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 385 ESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT----------- 433
E DVV+YN L++ C KD+ A+ L + ML +G P V+T NT
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591
Query: 434 ----------LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEAL 483
L + L + +V A + + M ++A T T+ + +CK + A+
Sbjct: 592 CDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Query: 484 E 484
+
Sbjct: 652 D 652
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 11/405 (2%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGR 167
SF ++F K D + LF R+ + + + + ++N G G
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 168 ILRSCF----TPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLC 223
++ S +PN ++F +IK LC + A +F C PD +TY TL++GLC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 224 RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDEN 283
+ A+ L +EM + C P+ V YN +IDGLCK+G + + +L M +
Sbjct: 234 KEERIDEAVLLLDEMQSEG------CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
P+ VTY ++I G C ++A L M+ P+ VT+ +++ L K + A
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
RLL M RG + N + Y+ LI G K + A L+ M GC ++V Y+ L++
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
C+ EA + + M++ G P TY++L G F+ E A++++ EM + + +
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ Y+ IDGLC G V EA+ ++ + + + V+Y+ +I GL
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 216/420 (51%), Gaps = 6/420 (1%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
+ + +F M+ P V + + L L K +H+ + LF + S G+ PD+Y ++ +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I C++ +S ++ + + N V + LI GLC + ++ EA +
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
+PDV TY TL+ GLC+ + L + +EM + P+ +++++GL K G
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
+++A L ++ D ++P++ Y ++I C ++EA+ LF M G++P+ VT+S+
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
++D C+ GK+D A L M+ G+ + Y YN+LI+G+C I A M +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
VV+Y +L+ YC + +AL LY EM KGI P++ T+ TL GLF + A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 449 KLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
KLF+EM +V + TYN I+G C+ G + +A E + + + + SY LI GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 6/401 (1%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
+ +N+L L K + + + K L L PD+ T+ L+ CK+ G ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
+L F+P+ +SL++GL +I EA L + F P++F YN LI+ LC+
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINP 286
A LF+ M G+ G+ +PN VTY+ +ID C+ G +D A +M D +
Sbjct: 382 KFHEAELLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 287 DVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLL 346
V Y S+I G C D + A+ EM+++ ++P VVT++ +M C GK++KA RL
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
M +G+ P+ YT+ TL+ G I A KLF M + V+YN +I YC+
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
D+ +A EM KGI P +Y L GL Q A D + + + + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+ G C+ G + EAL + + + +L++V Y LIDG
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 211/428 (49%), Gaps = 14/428 (3%)
Query: 81 DINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
+I L +E LC LR PS VSS L L K + L+L KR+ G+ P
Sbjct: 314 EIGLEMMDEMLC-----LRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
+++ ++ LI+ CK + ++ R+ + PN VT++ LI C ++ A +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTII 260
+ + V+ YN+LING C+ G A EM N E P VTY +++
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYTSLM 479
Query: 261 DGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQ 320
G C +G ++KA L+ +M + I P + T+T+++ G A +A +LF EM + V+
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 321 PDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKL 380
P+ VT++V+++ C+ G M KA L+ M +G+ P+TY+Y LI G CLT + A+
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 381 FVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFE 440
+ C + + Y L++ +C+ +EEALS+ EM+ +G+ +V Y L G +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 441 IHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVS 500
+ L EM + D Y + ID K+G EA ++ + + N V+
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 501 YNCLIDGL 508
Y +I+GL
Sbjct: 720 YTAVINGL 727
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 223/491 (45%), Gaps = 79/491 (16%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA +FD M ++ P V+ ++IL + DT LS + GL +Y ++
Sbjct: 384 HEAELLFDRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LIN CK G +S + ++ P VT+TSL+ G C++ +I +A L+ +
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
P ++T+ TL++GL R G A+ LF EMA N KPN VTYN +I+G C+EG
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEG 556
Query: 268 FVDKAKELFLKMKDENINPDV-----------------------------------VTYT 292
+ KA E +M ++ I PD + YT
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 293 SVIRGFCYANDWNEA-------------------------------KRLFI----EMMDQ 317
++ GFC EA ++LF EM D+
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 318 GVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA 377
G++PD V ++ ++D K G +A + +LMI G PN TY +I+G C ++ A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 378 RKLFVSMESNGCMHDVVSYNTLINWYCKNK-DVEEALSLYSEMLSKGIKPTVVTYNTLFL 436
L M+ + + V+Y ++ K + D+++A+ L++ +L KG+ TYN L
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIR 795
Query: 437 GLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
G ++E A +L M + V+ D TY I+ LC+ V +A+EL+ ++ +
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 497 NIVSYNCLIDG 507
+ V+YN LI G
Sbjct: 856 DRVAYNTLIHG 866
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 33/392 (8%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + +F L L + + LF + + P+ T++++I +C+ G +S F
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
L + P+ ++ LI GLC + EA CE + Y L++G CR
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 225 TGHTIVALNLFEEMANGNGEFGVVC-----------------------------KPNTVT 255
G AL++ +EM + +VC KP+ V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 256 YNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMM 315
Y ++ID K G +A ++ M +E P+ VTYT+VI G C A NEA+ L +M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 316 DQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL--MIWRGVNPNTYTYNTLIDGYCLTDK 373
P+ VT+ +D L K G++D + +EL I +G+ NT TYN LI G+C +
Sbjct: 745 PVSSVPNQVTYGCFLDILTK-GEVD-MQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
I+ A +L M +G D ++Y T+IN C+ DV++A+ L++ M KGI+P V YNT
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYT 465
L G ++ +A +L +EM R + + T
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 8/255 (3%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
+ +L K+K L K ++ GL PD ++ +I+ K G F + ++
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 170 RSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTI 229
PN VT+T++I GLC + EA L +K + + P+ TY ++ L + +
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 230 V-ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
A+ L + G NT TYN +I G C++G +++A EL +M + ++PD
Sbjct: 770 QKAVELHNAILKG-------LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
+TYT++I C ND +A L+ M ++G++PD V ++ ++ C G+M KA+ L
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 349 MIWRGVNPNTYTYNT 363
M+ +G+ PN T T
Sbjct: 883 MLRQGLIPNNKTSRT 897
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 210/422 (49%), Gaps = 12/422 (2%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
+AL +FD M + P S++IL L + + L ++ G P T+++L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL---FTKHRV 205
I C G + F + ++ PN T+T LI GLC + +I EA + K R+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 206 FACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCK 265
F P V TYN LING C+ G + A L M CKPN T+N +++GLC+
Sbjct: 368 F---PSVITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCR 418
Query: 266 EGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVT 325
G KA L +M D ++PD+V+Y +I G C N A +L M ++PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 326 FSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSME 385
F+ I++ CK GK D AS L LM+ +G++ + T TLIDG C K A + ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVE 445
+ S N +++ K V+E L++ ++ G+ P+VVTY TL GL +
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 446 RALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
+ ++ + M+ + + Y Y I+GLC+ G V EA +L A++DS N V+Y ++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Query: 506 DG 507
G
Sbjct: 659 KG 660
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 205/403 (50%), Gaps = 6/403 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P ++ +L L D +LF + G P+++T+++LI+ C+ G++ V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
++++ P+ +T+ +LI G C + R++ A L T AC+P+V T+N L+ GLCR
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G A++L + M + NG P+ V+YN +IDGLC+EG ++ A +L M +I
Sbjct: 419 VGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
PD +T+T++I FC + A M+ +G+ D VT + ++D +CK GK A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
+LE ++ + ++ N ++D K+ + + G + VV+Y TL++
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
++ D+ + + M G P V Y + GL + +VE A KL M+ + V+ +
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
TY + G +G + ALE RA+ + YELN Y+ L+ G
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 196/401 (48%), Gaps = 9/401 (2%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRIL 169
+ + L KN + + ++ G D + + L+ FC+ + V +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 170 R--SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGH 227
+ +C PN+V+++ LI GLC R+ EA L + C+P TY LI LC G
Sbjct: 258 KEVTC-APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 228 TIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPD 287
A NLF+EM CKPN TY +IDGLC++G +++A + KM + I P
Sbjct: 317 IDKAFNLFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 288 VVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLE 347
V+TY ++I G+C A L M + +P+V TF+ +M+ LC+ GK KA LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 348 LMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNK 407
M+ G++P+ +YN LIDG C ++ A KL SM D +++ +IN +CK
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 408 DVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYN 467
+ A + ML KGI VT TL G+ ++ + AL + + + + + ++ N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+D L K V E L + I ++V+Y L+DGL
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 5/348 (1%)
Query: 161 GFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLIN 220
+V R+ F + + +++ LC A +K D +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 221 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMK 280
G CR + AL +F+ M+ V C PN+V+Y+ +I GLC+ G +++A L +M
Sbjct: 239 GFCRGLNLRDALKVFDVMSK-----EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 281 DENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMD 340
++ P TYT +I+ C ++A LF EM+ +G +P+V T++V++D LC++GK++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 341 KASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLI 400
+A+ + M+ + P+ TYN LI+GYC ++ A +L ME C +V ++N L+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 401 NWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVA 460
C+ +A+ L ML G+ P +V+YN L GL + A KL M +
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 461 ADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
D T+ I+ CK G A + L+ V+ LIDG+
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 35/361 (9%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
P +A+ + ML SP VS +N+L L + H +T L +N + PD T +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVS-YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKH 203
+IN FCK G+ LG +LR + + VT T+LI G+C + +A + K
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 204 RVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGL 263
R+ + +++ C+ + L ++ G+V P+ VTY T++DGL
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL-------GLV--PSVVTYTTLVDGL 591
Query: 264 CKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDV 323
+ G + + + MK P+V YT +I G C EA++L M D GV P+
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 324 VTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK-IDHARKLFV 382
VT++V++ NGK+D+A + M+ RG N Y++L+ G+ L+ K ID++ + V
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 383 S-------------------MESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
S + GC+ + + L+ CK +E+ L +L +G
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERG 769
Query: 424 I 424
+
Sbjct: 770 V 770
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 219/409 (53%), Gaps = 7/409 (1%)
Query: 100 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS 159
M SP + +IL G L + + +D+V ++ + S GL PD++ + +L C K G S
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 160 HGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLI 219
+L + PN +T I LC ++++ EA +F + P+++TY+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 220 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM 279
+G C+TG+ A L++E+ PN V + T++DG CK + A+ LF+ M
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 280 KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKM 339
++P++ Y +I G C + + EA L EM + PDV T++++++ LC ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 340 DKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTL 399
+A+RL + M + P++ TYN+LI GYC ++ A L M ++G ++++++TL
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 400 INWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHV 459
I+ YC +D++ A+ LY EM KGI P VVTY L F+ ++ AL+L+ +M +
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 460 AADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ +T+ +DG K G + A++ ++ + N V + CLI+GL
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 205/403 (50%), Gaps = 6/403 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V + +LF C K Y L + S G+ P++Y ++I I C+ ++ +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+ + PN T++++I G C + +A L+ + V P+V + TL++G C+
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ A +LF M +FGV PN YN +I G CK G + +A L +M+ N+
Sbjct: 317 ARELVTARSLFVHMV----KFGV--DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASR 344
+PDV TYT +I G C + EA RLF +M ++ + P T++ ++ CK M++A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
L M GV PN T++TLIDGYC I A L+ M G + DVV+Y LI+ +
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
K +++EAL LYS+ML GI P T+ L G ++ ++ A+ + E + +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+ I+GLC++G++L A F +R +I SY ++ G
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Score = 175 bits (444), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 188/395 (47%), Gaps = 16/395 (4%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EA +F+ M + H P + +++ + K + L+K + A L P++ L
Sbjct: 252 EAEKMFELM-KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
++ FCK + + +++ PN + LI G C ++EA L ++
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
PDVFTY LINGLC A LF++M N P++ TYN++I G CKE
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPSSATYNSLIHGYCKEYN 424
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
+++A +L +M + P+++T++++I G+C D A L+ EM +G+ PDVVT++
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNG 388
++D K M +A RL M+ G++PN +T+ L+DG+ ++ A +
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 389 CMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERAL 448
+ V + LI C+N + A +S+M S GI P + +Y ++ G + ++ +
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 449 KLFDEMRR---------NHVAADTYTYNNFIDGLC 474
L +M + N + A Y N ++ C
Sbjct: 605 MLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 215/423 (50%), Gaps = 42/423 (9%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + FN L + + ++ S F N + + D+Y+ ILI C+ G + F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF---TKHRVFACE------------ 209
L + F+PN V +T+LI G C + I +A LF K + A E
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 210 --------------------PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
P+++TYN ++N LC+ G T A +F+EM E GV C
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR----ERGVSC 301
Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
N VTYNT+I GLC+E +++A ++ +MK + INP+++TY ++I GFC +A
Sbjct: 302 --NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
L ++ +G+ P +VT+++++ C+ G A+++++ M RG+ P+ TY LID +
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
+D ++ A +L +SME G + DV +Y+ LI+ +C + EA L+ M+ K +P V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
YNT+ LG + RALKL EM +A + +Y I+ LCK EA L +
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 490 RDS 492
DS
Sbjct: 540 IDS 542
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 181/329 (55%), Gaps = 6/329 (1%)
Query: 179 TFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEM 238
+F LIKG C I ++ L + F P+V Y TLI+G C+ G A +LF EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 239 ANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGF 298
G+ G+V N TY +I+GL K G + E++ KM+++ + P++ TY V+
Sbjct: 225 ----GKLGLV--ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 299 CYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNT 358
C +A ++F EM ++GV ++VT++ ++ LC+ K+++A+++++ M G+NPN
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 359 YTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSE 418
TYNTLIDG+C K+ A L ++S G +V+YN L++ +C+ D A + E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 419 MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGF 478
M +GIKP+ VTY L +E+A++L M + D +TY+ I G C G
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 479 VLEALELFRAIRDSKYELNIVSYNCLIDG 507
+ EA LF+++ + E N V YN +I G
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 170/319 (53%), Gaps = 6/319 (1%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
++ +L L KN +++++ G+FP++YT++ ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
+ N VT+ +LI GLC E ++ EA + + + P++ TYNTLI+G C G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
AL+L ++ + P+ VTYN ++ G C++G A ++ +M++ I P
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
VTYT +I F +++ +A +L + M + G+ PDV T+SV++ C G+M++ASRL +
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 349 MIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKD 408
M+ + PN YNT+I GYC A KL ME +V SY +I CK +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 409 VEEALSLYSEMLSKGIKPT 427
+EA L +M+ GI P+
Sbjct: 529 SKEAERLVEKMIDSGIDPS 547
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 137/270 (50%), Gaps = 7/270 (2%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
+A +FD M R + ++N L G L + + + ++ S G+ P++ T++ L
Sbjct: 286 DAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I+ FC +G++ + + +P+ VT+ L+ G C + AA + +
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGF 268
+P TY LI+ R+ + A+ L M E G+V P+ TY+ +I G C +G
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSME----ELGLV--PDVHTYSVLIHGFCIKGQ 458
Query: 269 VDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSV 328
+++A LF M ++N P+ V Y ++I G+C A +L EM ++ + P+V ++
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 329 IMDELCKNGKMDKASRLLELMIWRGVNPNT 358
+++ LCK K +A RL+E MI G++P+T
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
NEA + D M + P + ++N L LSL + L S GL P + T++I
Sbjct: 320 NEANKVVDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
L++ FC+ G S ++ + P+ VT+T LI + +A L
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
PDV TY+ LI+G C G A LF+ M N C+PN V YNT+I G CKEG
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN------CEPNEVIYNTMILGYCKEG 492
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+A +L +M+++ + P+V +Y +I C EA+RL +M+D G+ P S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 328 VI 329
+I
Sbjct: 553 LI 554
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 34/284 (11%)
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
+I G F + L + E Y +I + + N + F EM+D G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 319 VQP----------------------------------DVVTFSVIMDELCKNGKMDKASR 344
P DV +F +++ C+ G+++K+
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 345 LLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYC 404
LL + G +PN Y TLIDG C +I+ A+ LF M G + + +Y LIN
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 405 KNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTY 464
KN ++ +Y +M G+ P + TYN + L + + + A ++FDEMR V+ +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 465 TYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
TYN I GLC+ + EA ++ ++ N+++YN LIDG
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 98 LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
L+ P + ++NIL + + K + G+ P T++ILI+ F +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
+ + + P+ T++ LI G C + ++ EA+ LF CEP+ YNT
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
+I G C+ G + AL L +EM PN +Y +I+ LCKE +A+ L
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKE------LAPNVASYRYMIEVLCKERKSKEAERLVE 537
Query: 278 KMKDENINPDVVTYTSVIRG 297
KM D I+P + + R
Sbjct: 538 KMIDSGIDPSTSILSLISRA 557
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 218/432 (50%), Gaps = 13/432 (3%)
Query: 79 QGDINLITPNEALCIFDYML--RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSA 136
Q + L + L +F+ M R++PS V +N+L L K K + LF + +
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPS---VFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 137 GLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEA 196
L P + T++ LI+ +CK G F V R+ P+ +TF +L+KGL + +A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 197 AALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 256
+ + + PD FT++ L +G AL ++E + K N T
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG------VKMNAYTC 357
Query: 257 NTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMD 316
+ +++ LCKEG ++KA+E+ + + + P+ V Y ++I G+C D A R+ IE M+
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAME 416
Query: 317 -QGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKID 375
QG++PD + ++ ++ C+ G+M+ A + + M +GV+P+ TYN LI GY + D
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 376 HARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLF 435
+ ME NG M +VVSY TLIN CK + EA + +M +G+ P V YN L
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 436 LGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYE 495
G ++E A + EM + + + TYN IDGL +G + EA +L I +
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 496 LNIVSYNCLIDG 507
++ +YN LI G
Sbjct: 597 PDVFTYNSLISG 608
Score = 208 bits (530), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA +F + LR P S +L L K K + +++F + + P + +
Sbjct: 126 SEAADLF-FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
I K+ V G + R+ P+ + LI GLC R+ +A LF +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
P + TYNTLI+G C+ G+ + + E M + E P+ +T+NT++ GL K G
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE------PSLITFNTLLKGLFKAG 298
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
V+ A+ + +MKD PD T++ + G+ A ++ +D GV+ + T S
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++++ LCK GK++KA +L + +G+ PN YNT+IDGYC + AR +ME
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
G D ++YN LI +C+ ++E A ++M KG+ P+V TYN L G ++ ++
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+ EM N + +Y I+ LCK +LEA + R + D + YN LIDG
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 189/394 (47%), Gaps = 7/394 (1%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
P ++ + + M H P ++ FN L L K + ++ K + G PD +T S
Sbjct: 265 PEKSFKVRERMKADHIEPSLIT-FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
IL + + + V + S NA T + L+ LC E +I +A + +
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
P+ YNT+I+G CR G + A E M KP+ + YN +I C+
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG------MKPDHLAYNCLIRRFCEL 437
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
G ++ A++ KMK + ++P V TY +I G+ ++++ + EM D G P+VV++
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
+++ LCK K+ +A + M RGV+P YN LIDG C KI+ A + M
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
G ++V+YNTLI+ + EA L E+ KG+KP V TYN+L G V+R
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVL 480
+ L++EM+R+ + TY+ I K G L
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 211/470 (44%), Gaps = 72/470 (15%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P +F+ILF + N+ + L +++ +G+ + YT SIL+N CK G++ +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRI---------MEAAALFTKHRVFAC------- 208
LGR + PN V + ++I G C + + ME + H + C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 209 -------------------EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
P V TYN LI G R ++ +EM + NG
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED-NGTM---- 491
Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
PN V+Y T+I+ LCK + +A+ + M+D ++P V Y +I G C +A R
Sbjct: 492 -PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
EM+ +G++ ++VT++ ++D L GK+ +A LL + +G+ P+ +TYN+LI GY
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 370 LTDKIDHARKLFVSMESNG--------------CMH-----------------DVVSYNT 398
+ L+ M+ +G C D++ YN
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNG 670
Query: 399 LINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNH 458
+++ Y + D+E+A +L +M+ K I TYN+L LG ++ ++ L DEM
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 459 VAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ + TYN + G C+ + A +R +++ + L++ N L+ GL
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 10/357 (2%)
Query: 98 LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
+++ P V ++NIL G + +D + K + G P++ ++ LINC CK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
+ +V + +P + LI G C++ +I +A + E ++ TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
LI+GL TG A +L E++ KP+ TYN++I G G V + L+
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
+MK I P + TY +I C +RLF EM ++PD++ ++ ++ +G
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679
Query: 338 KMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYN 397
M+KA L + MI + + + TYN+LI G K+ R L M + + +YN
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 398 TLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
++ +C+ KD A Y EM KG V N L GL E + + A + EM
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 199/417 (47%), Gaps = 25/417 (5%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
VSSF CL Y+ S+ + + G PD T+S ++N C ++ F++
Sbjct: 451 VSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
+ R + T+T ++ C I +A F + R C P+V TY LI+ +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 227 HTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKM------- 279
A LFE M + C PN VTY+ +IDG CK G V+KA ++F +M
Sbjct: 568 KVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 280 ---------KDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIM 330
D + P+VVTY +++ GFC ++ EA++L M +G +P+ + + ++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 331 DELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
D LCK GK+D+A + M G YTY++LID Y + D A K+ M N C
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
+VV Y +I+ CK +EA L M KG +P VVTY + G I ++E L+L
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+ M VA + TY ID CK+G + A L ++ + + + Y +I+G
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 190/414 (45%), Gaps = 12/414 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P S+++ + L + LF+ + GL D+YT++I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+ TPN VT+T+LI ++ A LF C P++ TY+ LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 225 TGHTIVALNLFEEMANGNGEFGVVC----------KPNTVTYNTIIDGLCKEGFVDKAKE 274
G A +FE M V +PN VTY ++DG CK V++A++
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
L M E P+ + Y ++I G C +EA+ + EM + G + T+S ++D
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
K + D AS++L M+ PN Y +IDG C K D A KL ME GC +VV
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 395 SYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEM 454
+Y +I+ + +E L L M SKG+ P VTY L + ++ A L +EM
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 455 RRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
++ H T Y I+G K +E+L L I + Y LID L
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 200/461 (43%), Gaps = 66/461 (14%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P S++N L K D+ + + ++ A L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY--------- 215
+ F P+ V +T LI GLC S EA + R +C P+V TY
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 216 --------------------------NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
N+L++ C +G A L ++M
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------ 403
Query: 250 KPNTVTYNTIIDGLCKE------GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYAND 303
P V YN +I +C + +D A++ + +M + + + +S R C A
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 304 WNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNT 363
+ +A + EM+ QG PD T+S +++ LC KM+ A L E M G+ + YTY
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 364 LIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG 423
++D +C I+ ARK F M GC +VV+Y LI+ Y K K V A L+ MLS+G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 424 IKPTVVTYNTLFLGLFEIHQVERALKLFDEM--RRNHVAADTY--------------TYN 467
P +VTY+ L G + QVE+A ++F+ M ++ D Y TY
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 468 NFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+DG CKS V EA +L A+ E N + Y+ LIDGL
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 190/432 (43%), Gaps = 49/432 (11%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++ L K K LF+ + S G P+I T+S LI+ CK G+V +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 165 LGRILRS----------------CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
R+ S PN VT+ +L+ G C R+ EA L + C
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------NGEFGV-------- 247
EP+ Y+ LI+GLC+ G A + EM+ + F V
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 248 --------VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFC 299
C PN V Y +IDGLCK G D+A +L M+++ P+VVTYT++I GF
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 300 YANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTY 359
L M +GV P+ VT+ V++D CKNG +D A LLE M +T
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 360 TYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEM 419
Y +I+G+ + + L + + + Y LI+ K + +E AL L E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 420 --LSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
S + TYN+L L ++VE A +LF EM + V + ++ + I GL ++
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 478 FVLEALELFRAI 489
+ EAL L I
Sbjct: 969 KISEALLLLDFI 980
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 34/433 (7%)
Query: 97 MLRMHPSPPPVSSFNILFGCLAKNKH----YDTVLSLFKRLNSAGLFPDIYTHSI----- 147
+LR+ P V SF + G KH Y+ ++ L R + + P+ + I
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV-PEEFLQQIRDDDK 196
Query: 148 ---------LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAA 198
L+ C+ G S LGR+ F P+ T+ LI+ R+ A+
Sbjct: 197 EVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASL 256
Query: 199 LFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNT 258
+ + + D FT LC+ G AL L E E V P+TV Y
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTK 307
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQG 318
+I GLC+ ++A + +M+ + P+VVTY++++ G KR+ MM +G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 319 VQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT------D 372
P F+ ++ C +G A +LL+ M+ G P YN LI C D
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 373 KIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYN 432
+D A K + M + G + + ++ ++ C E+A S+ EM+ +G P TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 433 TLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDS 492
+ L ++E A LF+EM+R + AD YTY +D CK+G + +A + F +R+
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 493 KYELNIVSYNCLI 505
N+V+Y LI
Sbjct: 548 GCTPNVVTYTALI 560
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 152/330 (46%), Gaps = 11/330 (3%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
EA + D M M P ++ L L K D + ++ G +YT+S
Sbjct: 656 EEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LI+ + K+ R VL ++L + PN V +T +I GLC + EA L
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C+P+V TY +I+G G L L E M G GV PN VTY +ID CK G
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNG 828
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+D A L +MK + Y VI GF ++ E+ L E+ P + +
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTY--TYNTLIDGYCLTDKIDHARKLFVSME 385
+++D L K +++ A RLLE + Y TYN+LI+ CL +K++ A +LF M
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 386 SNGCMHDVVSYNTLINWYCKNKDVEEALSL 415
G + ++ S+ +LI +N + EAL L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 108/296 (36%), Gaps = 46/296 (15%)
Query: 214 TYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
YN L++ + R V +++ + + E FG N ++ C+ G A
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRKHCRNGSFSIA 219
Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
E ++KD P TY +I+ F A+ + A + EM ++ D T
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 333 LCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHD 392
LCK GK WR + +E+ + D
Sbjct: 280 LCKVGK------------WR--------------------------EALTLVETENFVPD 301
Query: 393 VVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFD 452
V Y LI+ C+ EEA+ + M + P VVTY+TL G Q+ R ++ +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 453 EMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
M +N+ + C SG A +L + + + V YN LI +
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 214 bits (546), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 211/434 (48%), Gaps = 43/434 (9%)
Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILR 170
N L L ++++++ S ++++ F + + S L+ C+ +M + F VL +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 171 SCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIV 230
F N L+KGLC +A +L + R + PDVF+YNT+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 231 ALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
AL L EM G+G C + VT+ +ID CK G +D+A +MK + D+V
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
YTS+IRGFC + + K LF E++++G P +T++ ++ CK G++ +AS + E MI
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
RGV PN YTY LIDG C K A +L M + V+YN +IN CK+ V
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRN--HVAADTYTYNN 468
+A+ + M + +P +TYN L GL ++ A KL M ++ + D +YN
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 469 FIDGLC-----------------------------------KSGFVLEALELFRAIRDSK 493
I GLC K+G V +A+EL++ I DSK
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 494 YELNIVSYNCLIDG 507
N +Y +IDG
Sbjct: 490 IVRNSDTYTAMIDG 503
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 10/405 (2%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLG 166
V + NIL L +N +SL + + L PD+++++ +I FC+ + +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 167 RILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTG 226
+ S + + VT+ LI C ++ EA + + E D+ Y +LI G C G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 227 HTIVALNLFEE-MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENIN 285
LF+E + G+ P +TYNT+I G CK G + +A E+F M + +
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 286 PDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRL 345
P+V TYT +I G C EA +L M+++ +P+ VT+++I+++LCK+G + A +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 346 LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSM--ESNGCMHDVVSYNTLINWY 403
+ELM R P+ TYN L+ G C +D A KL M +S+ DV+SYN LI+
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 404 CKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADT 463
CK + +AL +Y ++ K VT N L + V +A++L+ ++ + + ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 464 YTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
TY IDG CK+G + A L +R S+ + ++ YNCL+ L
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 199/400 (49%), Gaps = 8/400 (2%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
++ IL K D + K + GL D+ ++ LI FC G + G + +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
L +P A+T+ +LI+G C ++ EA+ +F P+V+TY LI+GLC G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
AL L M + E PN VTYN II+ LCK+G V A E+ MK PD
Sbjct: 334 KEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQG--VQPDVVTFSVIMDELCKNGKMDKASRLL 346
+TY ++ G C D +EA +L M+ PDV++++ ++ LCK ++ +A +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 347 ELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKN 406
+L++ + + T N L++ ++ A +L+ + + + + +Y +I+ +CK
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 407 KDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTY 466
+ A L +M ++P+V YN L L + +++A +LF+EM+R++ D ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 467 NNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
N IDG K+G + A L + + ++ +Y+ LI+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 198/413 (47%), Gaps = 10/413 (2%)
Query: 98 LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGR 157
+R + P V S+N + + K + L L + +G + T ILI+ FCK G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 158 VSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNT 217
+ L + + V +TSLI+G C + ALF + P TYNT
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFL 277
LI G C+ G A +FE M E GV +PN TY +IDGLC G +A +L
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMI----ERGV--RPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 278 KMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNG 337
M +++ P+ VTY +I C +A + M + +PD +T+++++ LC G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 338 KMDKASRLLELMIWRG--VNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
+D+AS+LL LM+ +P+ +YN LI G C +++ A ++ + D V+
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
N L+N K DV +A+ L+ ++ I TY + G + + A L +MR
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI-RDSKYELNIVSYNCLIDG 507
+ + + YN + LCK G + +A LF + RD+ + ++VS+N +IDG
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMIDG 573
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 191/438 (43%), Gaps = 40/438 (9%)
Query: 93 IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCF 152
+FD +L SP ++ +N L K +F+ + G+ P++YT++ LI+
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 153 CKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
C +G+ +L ++ PNAVT+ +I LC + + +A + + PD
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE------ 266
TYN L+ GLC G A L M + P+ ++YN +I GLCKE
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443
Query: 267 -----------------------------GFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
G V+KA EL+ ++ D I + TYT++I G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
FC N AK L +M +QP V ++ ++ LCK G +D+A RL E M P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
++N +IDG I A L V M G D+ +Y+ LIN + K ++EA+S +
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
+M+ G +P +++ + ++ +L ++ + D +D +C S
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Query: 478 FVLEALELFRAIRDSKYE 495
++ + + D K E
Sbjct: 684 ANMDLAKRLLRVTDDKEE 701
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 140/257 (54%)
Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
N +N ++ GLC+ KA L +M+ ++ PDV +Y +VIRGFC + +A L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
EM G +VT+ +++D CK GKMD+A L+ M + G+ + Y +LI G+C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
++D + LF + G ++YNTLI +CK ++EA ++ M+ +G++P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
L GL + + + AL+L + M + TYN I+ LCK G V +A+E+ ++
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 492 SKYELNIVSYNCLIDGL 508
+ + ++YN L+ GL
Sbjct: 381 RRTRPDNITYNILLGGL 397
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%)
Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
M+ +G +V ++++ LC+N + KA LL M + P+ ++YNT+I G+C +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
++ A +L M+ +GC +V++ LI+ +CK ++EA+ EM G++ +V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
L G + +++R LFDE+ + TYN I G CK G + EA E+F + +
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 494 YELNIVSYNCLIDGL 508
N+ +Y LIDGL
Sbjct: 313 VRPNVYTYTGLIDGL 327
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 223/451 (49%), Gaps = 31/451 (6%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++A+ I+DY++ ++ S P V + N L L K++ ++ + G D Y+ I
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210
Query: 148 LINCFCKMGRVSHGF-VVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
L+ C G+V G ++ GR + C PN V + ++I G C I A +F + ++
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------------------ 248
P + T+ T+ING C+ G + + L E+ V
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 249 -----------CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
CKP+ TYN +I+ LCKEG + A + + + P+ ++Y +I+
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPN 357
+C + +++ A +L ++M ++G +PD+VT+ +++ L +G MD A + +I RGV+P+
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 358 TYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYS 417
YN L+ G C T + A+ LF M + D Y TLI+ + ++ D +EA ++S
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 418 EMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSG 477
+ KG+K VV +N + G ++ AL + M H+ D +TY+ IDG K
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 478 FVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ A+++FR + +K + N+V+Y LI+G
Sbjct: 570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 165/349 (47%), Gaps = 21/349 (6%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + ++ IL L + H D +++ +L G+ PD +++L++ CK GR ++
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+L P+A + +LI G EA +F+ + DV +N +I G CR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
+G AL M N E V P+ TY+TIIDG K+ + A ++F M+
Sbjct: 533 SGMLDEALACMNRM---NEEHLV---PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK-MDKAS 343
P+VVTYTS+I GFC D+ A+ F EM + + P+VVT++ ++ L K ++KA
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLT---------DKIDHAR-----KLFVSMESNGC 389
ELM+ PN T+N L+ G+ D +H + + F M+S+G
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGL 438
+YN+ + C + V+ A +M+ KG P V++ + G
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 174/384 (45%), Gaps = 21/384 (5%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRI 168
S+ L K+K YD L ++ G PDI T+ ILI+ G + + ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 169 LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHT 228
+ +P+A + L+ GLC R + A LF++ PD + Y TLI+G R+G
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 229 IVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDV 288
A +F E GV K + V +N +I G C+ G +D+A +M +E++ PD
Sbjct: 502 DEARKVFSLSV----EKGV--KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 289 VTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLEL 348
TY+++I G+ D A ++F M +P+VVT++ +++ C G A +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 349 MIWRGVNPNTYTYNTLIDGYCL-TDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCK-- 405
M R + PN TY TLI + ++ A + M +N C+ + V++N L+ + K
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675
Query: 406 -NKDVEE-------ALSLYSE----MLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
K + E SL+SE M S G YN+ + L V+ A D+
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDK 735
Query: 454 MRRNHVAADTYTYNNFIDGLCKSG 477
M + + D ++ + G C G
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVG 759
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 148/370 (40%), Gaps = 58/370 (15%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P + +N+L L K + LF + + PD Y ++ LI+ F + G V
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+ + V ++IKG C + EA A + PD FTY+T+I+G +
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
A+ +F M CKPN VTY ++I+G C +G A+E F +M+ ++
Sbjct: 568 QQDMATAIKIFRYMEKNK------CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 285 NPDVVTYTSVIRGFCYANDWNEAKRLFIE-MMDQGVQPDVVTFSVIMDE----------- 332
P+VVTYT++IR + E + E MM P+ VTF+ ++
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681
Query: 333 --------------------------------------LCKNGKMDKASRLLELMIWRGV 354
LC +G + A + M+ +G
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741
Query: 355 NPNTYTYNTLIDGYCLTDKIDHARKL-FVSMESNGCMHDVVSYNTLINWYCKNKDVEEAL 413
+P+ ++ ++ G+C+ R + F ++ G + V Y+ ++ + + EA
Sbjct: 742 SPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKG-LEVAVRYSQVLEQHLPQPVICEAS 800
Query: 414 SLYSEMLSKG 423
++ M+ K
Sbjct: 801 TILHAMVEKA 810
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 121/242 (50%), Gaps = 5/242 (2%)
Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF---IEMMDQGVQPDVVTF 326
++ +++ +++EN+ + V+ + + ++A ++ +E+ D PDV+
Sbjct: 116 NEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS--VPDVIAC 173
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
+ ++ L K+ ++ A ++ + M RG + + Y+ L+ G C K++ RKL
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
GC+ ++V YNT+I YCK D+E A ++ E+ KG PT+ T+ T+ G +
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
+ +L E++ + + NN ID + G+ ++ E I + + ++ +YN LI+
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 507 GL 508
L
Sbjct: 354 RL 355
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 33/444 (7%)
Query: 97 MLRMHPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCK 154
M +M S P + ++N + K + + L + S G+ D+ T+++LI+ C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 155 MGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFT 214
R++ G+++L + + PN VT+ +LI G E +++ A+ L + F P+ T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 215 YNTLINGLCRTGHTIVALNLFEEM-ANG-----------------NGEFGV--------- 247
+N LI+G G+ AL +F M A G N EF +
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 248 ---VCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDW 304
VC +TY +IDGLCK GF+D+A L +M + I+PD+VTY+++I GFC +
Sbjct: 396 RNGVC-VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 305 NEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTL 364
AK + + G+ P+ + +S ++ C+ G + +A R+ E MI G + +T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Query: 365 IDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGI 424
+ C K+ A + M S+G + + VS++ LIN Y + + +A S++ EM G
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 425 KPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALE 484
PT TY +L GL + + A K + A DT YN + +CKSG + +A+
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634
Query: 485 LFRAIRDSKYELNIVSYNCLIDGL 508
LF + + +Y LI GL
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGL 658
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
++L IF M ++ P V + N + G + K+ +V S K + + PD+ T +I
Sbjct: 140 QDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
LIN C G ++ ++ +S + P VT+ +++ C + R A L +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
+ DV TYN LI+ LCR+ L +M + PN VTYNT+I+G EG
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK------RMIHPNEVTYNTLINGFSNEG 312
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
V A +L +M ++P+ VT+ ++I G ++ EA ++F M +G+ P V++
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
V++D LCKN + D A M GV TY +IDG C +D A L M +
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
G D+V+Y+ LIN +CK + A + + G+ P + Y+TL + ++ A
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
+++++ M D +T+N + LCK+G V EA E R + N VS++CLI+G
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 207/457 (45%), Gaps = 31/457 (6%)
Query: 83 NLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFP 140
+++ E + ++ ++ M P V++FNIL L ++ L +++ +G P
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 226
Query: 141 DIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALF 200
I T++ +++ +CK GR +L + + T+ LI LC +RI + L
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 286
Query: 201 TKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN------------------GN 242
R P+ TYNTLING G ++A L EM +
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346
Query: 243 GEFGVVCK-----------PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
G F K P+ V+Y ++DGLCK D A+ +++MK + +TY
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
T +I G C +EA L EM G+ PD+VT+S +++ CK G+ A ++ +
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
G++PN Y+TLI C + A +++ +M G D ++N L+ CK V E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
A M S GI P V+++ L G + +A +FDEM + +TY + +
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
GLCK G + EA + +++ ++ V YN L+ +
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 7/352 (1%)
Query: 156 GRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTY 215
G+ S F L R C N + LI+ E I ++ +F ++ P V+T
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 216 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKEL 275
N ++ + ++G + + +EM +C P+ T+N +I+ LC EG +K+ L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215
Query: 276 FLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCK 335
KM+ P +VTY +V+ +C + A L M +GV DV T+++++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 336 NGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVS 395
+ ++ K LL M R ++PN TYNTLI+G+ K+ A +L M S G + V+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 396 YNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMR 455
+N LI+ + + +EAL ++ M +KG+ P+ V+Y L GL + + + A + M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 456 RNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
RN V TY IDGLCK+GF+ EA+ L + + +IV+Y+ LI+G
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 189/421 (44%), Gaps = 10/421 (2%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
EAL +F YM+ P S+ +L L KN +D + R+ G+ T++ +
Sbjct: 351 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
I+ CK G + V+L + + P+ VT+++LI G C R A + +
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 209 EPDVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
P+ Y+TLI CR G A+ ++E M G+ + T+N ++ LCK G
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFNVLVTSLCKAG 522
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
V +A+E M + I P+ V++ +I G+ + + +A +F EM G P T+
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ LCK G + +A + L+ + +T YNTL+ C + + A LF M
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKG-IKPTVVTYNTLFLGLFEIHQVER 446
+ D +Y +LI+ C+ A+ E ++G + P V Y G+F+ Q +
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
+ ++M D T N IDG + G + + +L + + N+ +YN L+
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 507 G 507
G
Sbjct: 763 G 763
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 45/457 (9%)
Query: 89 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSIL 148
+A +FD M ++ P + ++L G L K H K L++ D ++ L
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFAC 208
+ CK G ++ + G +++ P++ T+TSLI GLC + + + A LF K
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV-IAILFAKEAEARG 678
Query: 209 E--PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
P+ Y ++G+ + G + E+M N + P+ VT N +IDG +
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRM 732
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
G ++K +L +M ++N P++ TY ++ G+ D + + L+ ++ G+ PD +T
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHA-------RK 379
++ +C++ ++ ++L+ I RGV + YT+N LI C +I+ A
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 380 LFVSMESNGC-------------------MHDVV---------SYNTLINWYCKNKDVEE 411
L +S++ + C +H++ Y LIN C+ D++
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFID 471
A + EM++ I P V + + L + + + A L M + + ++ +
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 472 GLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
CK+G V+EALEL + + +L++VSYN LI GL
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 154/317 (48%), Gaps = 18/317 (5%)
Query: 209 EPDVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 251
+P + T + ++ +C T H +V A ++ +E++ +G+ FG + C
Sbjct: 63 QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 121
Query: 252 NTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLF 311
N Y+ +I +EG + + E+F M NP V T +++ + +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 312 IEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLT 371
EM+ + + PDV TF+++++ LC G +K+S L++ M G P TYNT++ YC
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 372 DKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTY 431
+ A +L M+S G DV +YN LI+ C++ + + L +M + I P VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 432 NTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
NTL G +V A +L +EM ++ + T+N IDG G EAL++F +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 492 SKYELNIVSYNCLIDGL 508
+ VSY L+DGL
Sbjct: 362 KGLTPSEVSYGVLLDGL 378
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 180/451 (39%), Gaps = 79/451 (17%)
Query: 96 YMLRMHPSPPPVSS--FNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFC 153
++ +H P V + +N L + K+ + +SLF + + PD YT++ LI+ C
Sbjct: 600 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659
Query: 154 KMGRVSHGFVVLGRI-LRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDV 212
+ G+ + R PN V +T + G+ + + PD+
Sbjct: 660 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 719
Query: 213 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKA 272
T N +I+G R G +L EM N NG PN TYN ++ G K V +
Sbjct: 720 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG------GPNLTTYNILLHGYSKRKDVSTS 773
Query: 273 KELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDE 332
L+ + I PD +T S++ G C +N ++ + +GV+ D TF++++ +
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833
Query: 333 LCKNGKMDKASRLLELMIW-----------------------------------RGVNPN 357
C NG+++ A L+++M +G++P
Sbjct: 834 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893
Query: 358 TYTYNTLIDGYCLTDKI-----------------------------------DHARKLFV 382
+ Y LI+G C I D A L
Sbjct: 894 SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953
Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
M + + S+ TL++ CKN +V EAL L M + G+K +V+YN L GL
Sbjct: 954 FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013
Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGL 473
+ A +L++EM+ + A+ TY I GL
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
+EA + +ML+M P ++SF L KN + L L +++ GL D+ +++
Sbjct: 945 ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTK 202
+LI C G ++ F + + F NA T+ +LI+GL A A + K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 205/400 (51%), Gaps = 8/400 (2%)
Query: 93 IFDYMLRMHPSPPPVSSFNIL-FGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINC 151
+FD M + P SS+ ++ GC K + L + G PD T ++++
Sbjct: 204 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 261
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
C+ G V+ +++ F PN + FTSLI GLC + I +A + + +P+
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
V+T+ LI+GLC+ G T A LF ++ + KPN TY ++I G CKE +++
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
A+ LF +MK++ + P+V TYT++I G C A + A L M D+G P++ T++ +D
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 332 ELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMH 391
LCK + +A LL G+ + TY LI C + I+ A F M G
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 392 DVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLF 451
D+ N LI +C+ K ++E+ L+ ++S G+ PT TY ++ + ++ ALK F
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 452 DEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRD 491
M+R+ D++TY + I GLCK V EA +L+ A+ D
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 596
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 8/348 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
N A+ F M+ + P ++ F L L K + + + G P++YTH+
Sbjct: 269 NRAIWYFRKMIDLGFKPNLIN-FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
LI+ CK G F + +++RS + PN T+TS+I G C E ++ A LF++ +
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
P+V TY TLING C+ G + E+ N G+ G + PN TYN ID LCK+
Sbjct: 388 GLFPNVNTYTTLINGHCKAG----SFGRAYELMNLMGDEGFM--PNIYTYNAAIDSLCKK 441
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
+A EL K + D VTYT +I+ C ND N+A F M G + D+
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
++++ C+ KM ++ RL +L++ G+ P TY ++I YC ID A K F +M+
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTL 434
+GC+ D +Y +LI+ CK V+EA LY M+ +G+ P VT TL
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 170/355 (47%), Gaps = 7/355 (1%)
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPD 211
F ++GR++ ++ + TP+++T +++ I A +F + V PD
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 212 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDK 271
+Y ++ G R G A + G + G + P+ T I+ LC+ G V++
Sbjct: 217 SSSYKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENGLVNR 270
Query: 272 AKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMD 331
A F KM D P+++ +TS+I G C +A + EM+ G +P+V T + ++D
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 332 ELCKNGKMDKASRL-LELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCM 390
LCK G +KA RL L+L+ PN +TY ++I GYC DK++ A LF M+ G
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 391 HDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKL 450
+V +Y TLIN +CK A L + M +G P + TYN L + + A +L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 451 FDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
++ + AD TY I CK + +AL F + + +E ++ N LI
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 165/355 (46%), Gaps = 19/355 (5%)
Query: 173 FTPNAVTF---TSLIKGLCAESRIMEA------AALFTKHRVFACEPDVFTYNTLINGLC 223
F N++T +++ L +ES M A A F K R F V + L NG
Sbjct: 84 FDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNL 143
Query: 224 RTGHTIVALNL--FEEMANGNGEFGVVCK-------PNTVTYNTIIDGLCKEGFVDKAKE 274
+ H ++ L F E+ N G+V P+++T N +++ + G ++ A+
Sbjct: 144 QKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN 203
Query: 275 LFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELC 334
+F +M + PD +Y ++ G EA R M+ +G PD T ++I+ LC
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 335 KNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVV 394
+NG +++A MI G PN + +LIDG C I A ++ M NG +V
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 395 SYNTLINWYCKNKDVEEALSLYSEML-SKGIKPTVVTYNTLFLGLFEIHQVERALKLFDE 453
++ LI+ CK E+A L+ +++ S KP V TY ++ G + ++ RA LF
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 454 MRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
M+ + + TY I+G CK+G A EL + D + NI +YN ID L
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 211/421 (50%), Gaps = 8/421 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EAL +F+ M + + P +S++NIL L + DT L + AGLFP++ T +I
Sbjct: 360 DEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
+++ CK ++ + + TP+ +TF SLI GL R+ +A ++ K
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
C + Y +LI G ++++M N N C P+ NT +D + K G
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN------CSPDLQLLNTYMDCMFKAG 531
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
+K + +F ++K PD +Y+ +I G A NE LF M +QG D ++
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
+++D CK GK++KA +LLE M +G P TY ++IDG D++D A LF +S
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
+VV Y++LI+ + K ++EA + E++ KG+ P + T+N+L L + ++ A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
L F M+ + TY I+GLCK +A ++ ++ + + +SY +I G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 508 L 508
L
Sbjct: 772 L 772
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 211/421 (50%), Gaps = 8/421 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
+EA+ +F++ L + P ++N + +D SL +R + G P + ++
Sbjct: 290 DEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
++ C KMG+V V + + PN T+ LI LC ++ A L +
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
P+V T N +++ LC++ A +FEEM VC P+ +T+ ++IDGL K G
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDEITFCSLIDGLGKVG 461
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
VD A +++ KM D + + + YTS+I+ F + +++ +M++Q PD+ +
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
MD + K G+ +K + E + R P+ +Y+ LI G + +LF SM+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
GC+ D +YN +I+ +CK V +A L EM +KG +PTVVTY ++ GL +I +++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
LF+E + + + Y++ IDG K G + EA + + N+ ++N L+D
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 508 L 508
L
Sbjct: 702 L 702
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 206/441 (46%), Gaps = 30/441 (6%)
Query: 97 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMG 156
M+R P S++ L G + H D +L+LF+++ G P ++ + LI F K G
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 157 RVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYN 216
RV +L + S + V + I ++ A F + +PD TY
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 217 TLINGLCRTGHTIVALNLFEE---------------MANGNGEFGVVCK----------- 250
++I LC+ A+ +FE M G G G +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 251 ---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEA 307
P+ + YN I+ L K G VD+A ++F +MK ++ P++ TY +I C A + A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 308 KRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDG 367
L M G+ P+V T ++++D LCK+ K+D+A + E M ++ P+ T+ +LIDG
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 368 YCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPT 427
++D A K++ M + C + + Y +LI + + E+ +Y +M+++ P
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 428 VVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFR 487
+ NT +F+ + E+ +F+E++ D +Y+ I GL K+GF E ELF
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 488 AIRDSKYELNIVSYNCLIDGL 508
++++ L+ +YN +IDG
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGF 597
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 193/418 (46%), Gaps = 7/418 (1%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSI 147
N A+ F + R P S+N L +A+ +++D + + ++ AG P + T
Sbjct: 79 NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFA 207
++ K ++ G+ V+ + + F P +T+LI A + LF + +
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 208 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEG 267
EP V + TLI G + G AL+L +EM + + + V YN ID K G
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS------LDADIVLYNVCIDSFGKVG 252
Query: 268 FVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFS 327
VD A + F +++ + PD VTYTS+I C AN +EA +F + P ++
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 328 VIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESN 387
++ GK D+A LLE +G P+ YN ++ K+D A K+F M+ +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 388 GCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERA 447
++ +YN LI+ C+ ++ A L M G+ P V T N + L + +++ A
Sbjct: 373 AA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 448 LKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLI 505
+F+EM D T+ + IDGL K G V +A +++ + DS N + Y LI
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 171/364 (46%), Gaps = 6/364 (1%)
Query: 129 LFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLC 188
++K + + PD+ + ++C K G G + I F P+A +++ LI GL
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 189 AESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 248
E LF + C D YN +I+G C+ G A L EEM E
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE---- 619
Query: 249 CKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAK 308
P VTY ++IDGL K +D+A LF + K + I +VV Y+S+I GF +EA
Sbjct: 620 --PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 309 RLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGY 368
+ E+M +G+ P++ T++ ++D L K ++++A + M PN TY LI+G
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 369 CLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTV 428
C K + A + M+ G +SY T+I+ K ++ EA +L+ + G P
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 429 VTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRA 488
YN + GL ++ A LF+E RR + T +D L K+ + +A +
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAV 857
Query: 489 IRDS 492
+R++
Sbjct: 858 LRET 861
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 46/372 (12%)
Query: 173 FTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVAL 232
F P +++ L +R +E + + P+ + L+ CR
Sbjct: 61 FKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN------- 113
Query: 233 NLFEEMANGNGEFGVVC-KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTY 291
F+ + GE V P+ T ++ G K + + ++ M+ P Y
Sbjct: 114 --FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171
Query: 292 TSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIW 351
T++I F N + LF +M + G +P V F+ ++ K G++D A LL+ M
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 352 RGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEE 411
++ + YN ID + K+D A K F +E+NG D V+Y ++I CK ++E
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 412 ALSLYSEMLSKGIKPTVVTYNTLFLG---------------------------------- 437
A+ ++ + P YNT+ +G
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 438 -LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYEL 496
L ++ +V+ ALK+F+EM+++ A + TYN ID LC++G + A EL +++ +
Sbjct: 352 CLRKMGKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 497 NIVSYNCLIDGL 508
N+ + N ++D L
Sbjct: 411 NVRTVNIMVDRL 422
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 205/425 (48%), Gaps = 41/425 (9%)
Query: 118 AKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVVLGRILRSCFTPNA 177
K+ T ++KR+ G+ P++ T++ILI C+ GR+ F + G+IL+ P+
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 178 VTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEE 237
VT++SLI G C + AL+ PDV Y L++GL + G + A+ +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 238 MANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRG 297
M G + N V +N++IDG C+ D+A ++F M I PDV T+T+V+R
Sbjct: 487 M------LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 298 FCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGK------------------- 338
EA LF M G++PD + + ++D CK+ K
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 339 ----------------MDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFV 382
++ AS+ +I + P+ TYNT+I GYC ++D A ++F
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 383 SMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIH 442
++ + V+ LI+ CKN D++ A+ ++S M KG KP VTY L +
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 443 QVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYN 502
+E + KLF+EM+ ++ +Y+ IDGLCK G V EA +F D+K ++V+Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 503 CLIDG 507
LI G
Sbjct: 781 ILIRG 785
Score = 201 bits (512), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 210/437 (48%), Gaps = 41/437 (9%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGF-- 162
P V +F L K D LFK + G+ PD+ +S LI+ + K G + G
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 163 ---------------------------------VVLGRILRSCFTPNAVTFTSLIKGLCA 189
VV R+L +PN VT+T LIKGLC
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 249
+ RI EA ++ + EP + TY++LI+G C+ G+ L+E+M +
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK------MGY 457
Query: 250 KPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKR 309
P+ V Y ++DGL K+G + A +KM ++I +VV + S+I G+C N ++EA +
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
+F M G++PDV TF+ +M G++++A L M G+ P+ Y TLID +C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
K +LF M+ N D+ N +I+ K +E+A ++ ++ ++P +V
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAI 489
TYNT+ G + +++ A ++F+ ++ +T T I LCK+ + A+ +F +
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 490 RDSKYELNIVSYNCLID 506
+ + N V+Y CL+D
Sbjct: 698 AEKGSKPNAVTYGCLMD 714
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 230/517 (44%), Gaps = 77/517 (14%)
Query: 59 TVKDR---ASLKKFLKERCKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFG 115
+++DR A + KFL E C G D +AL IF Y ++ P S + +L
Sbjct: 138 SIRDRSLDADVCKFLMECCCRYGMVD-------KALEIFVYSTQLGVVIPQDSVYRMLNS 190
Query: 116 CLAKNKHYDTVLSLFKRLNSAGLFPD-IYTHSILINC-FCKMGRVS-----------HGF 162
+ ++ D + F +L G+ P + H +++ FCK G V+ GF
Sbjct: 191 LIGSDR-VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGF 248
Query: 163 VV-----------------------LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAAL 199
V L +L PN VTF +LI G C + A L
Sbjct: 249 RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 200 FTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------- 248
F EPD+ Y+TLI+G + G + LF + + + VV
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 249 ---------------CK---PNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVT 290
C+ PN VTY +I GLC++G + +A ++ ++ + P +VT
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 291 YTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMI 350
Y+S+I GFC + L+ +M+ G PDVV + V++D L K G M A R M+
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 351 WRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVE 410
+ + N +N+LIDG+C ++ D A K+F M G DV ++ T++ +E
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548
Query: 411 EALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFI 470
EAL L+ M G++P + Y TL + + L+LFD M+RN ++AD N I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608
Query: 471 DGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDG 507
L K + +A + F + + K E +IV+YN +I G
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 197/417 (47%), Gaps = 41/417 (9%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V ++ IL L ++ ++ ++ G+ P I T+S LI+ FCK G + GF +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+++ + P+ V + L+ GL + ++ A K + +V +N+LI+G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
AL +F M G +G+ KP+ T+ T++ EG +++A LF +M +
Sbjct: 509 LNRFDEALKVFRLM----GIYGI--KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 285 NPDVVTYTSVIRGFCY-----------------------------------ANDWNEAKR 309
PD + Y ++I FC + +A +
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 310 LFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYC 369
F +++ ++PD+VT++ ++ C ++D+A R+ EL+ PNT T LI C
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 370 LTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVV 429
+ +D A ++F M G + V+Y L++W+ K+ D+E + L+ EM KGI P++V
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 430 TYNTLFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELF 486
+Y+ + GL + +V+ A +F + + D Y I G CK G ++EA L+
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 7/373 (1%)
Query: 90 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
+++ M++M PP V + +L L+K + ++ + ++ + LI
Sbjct: 445 GFALYEDMIKMG-YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACE 209
+ +C++ R V + P+ TFT++++ E R+ EA LF + E
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 210 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFV 269
PD Y TLI+ C+ + L LF+ M + N +I L K +
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK------ISADIAVCNVVIHLLFKCHRI 617
Query: 270 DKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVI 329
+ A + F + + + PD+VTY ++I G+C +EA+R+F + P+ VT +++
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 330 MDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGC 389
+ LCKN MD A R+ +M +G PN TY L+D + + I+ + KLF M+ G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 390 MHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALK 449
+VSY+ +I+ CK V+EA +++ + + + P VV Y L G ++ ++ A
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 450 LFDEMRRNHVAAD 462
L++ M RN V D
Sbjct: 798 LYEHMLRNGVKPD 810
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 8/292 (2%)
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT-YNTIIDGLCKEGFVDKAKELF 276
++N L + + + F+++ G E P+ V+ + ++D L +G V KA +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIE------PSGVSAHGFVLDALFCKGEVTKALDFH 240
Query: 277 LKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKN 336
+ + +V+ V++G + A RL ++D G P+VVTF +++ CK
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 337 GKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSY 396
G+MD+A L ++M RG+ P+ Y+TLIDGY + KLF G DVV +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 397 NTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRR 456
++ I+ Y K+ D+ A +Y ML +GI P VVTY L GL + ++ A ++ ++ +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 457 NHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
+ TY++ IDG CK G + L+ + Y ++V Y L+DGL
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 24/434 (5%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLF--------KRLNSAGL 138
PN AL F + P SF + L +N +D +F K N G
Sbjct: 83 PNSALKYFRWAEISGKDP----SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGS 138
Query: 139 FPDIYTHS----ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIM 194
D + L+ C C+ G V + + + ++ L R+
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198
Query: 195 EAAALFTKHRVFACEPD-VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 253
A F K EP V + +++ L G AL+ + G+V
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV----- 253
Query: 254 VTYNTIIDGLCKEGFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIE 313
+ N ++ GL + ++ A L + D P+VVT+ ++I GFC + + A LF
Sbjct: 254 -SCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 314 MMDQGVQPDVVTFSVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDK 373
M +G++PD++ +S ++D K G + +L + +GV + +++ ID Y +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 374 IDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNT 433
+ A ++ M G +VV+Y LI C++ + EA +Y ++L +G++P++VTY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 434 LFLGLFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSK 493
L G + + L+++M + D Y +DGL K G +L A+ +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 494 YELNIVSYNCLIDG 507
LN+V +N LIDG
Sbjct: 492 IRLNVVVFNSLIDG 505
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 211/422 (50%), Gaps = 9/422 (2%)
Query: 88 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSAGLFPDIYTHS 146
++AL +FD M P V+ +NIL K K + T + L+ RL + ++P++ TH+
Sbjct: 201 DDALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
I+I+ K GRV + R+ ++ + T++SLI GLC + +A ++F +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
DV TYNT++ G CR G +L L+ M + N N V+YN +I GL +
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-------VNIVSYNILIKGLLEN 372
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
G +D+A ++ M + D TY I G C N+A + E+ G DV +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
+ I+D LCK ++++AS L++ M GV N++ N LI G ++ A M
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
NGC VVSYN LI CK EA + EML G KP + TY+ L GL +++
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 447 ALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLID 506
AL+L+ + ++ + D +N I GLC G + +A+ + + N+V+YN L++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 507 GL 508
G
Sbjct: 613 GF 614
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 219/491 (44%), Gaps = 74/491 (15%)
Query: 87 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHS 146
P++AL +F M + P + S+N L + K + V SLF +AG+ P++ T++
Sbjct: 94 PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVF 206
+LI CK L + + F P+ +++++I L ++ +A LF +
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 207 ACEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKE 266
PDV YN LI+G + A+ L++ + + + PN T+N +I GL K
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY-----PNVKTHNIMISGLSKC 268
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
G VD +++ +MK D+ TY+S+I G C A + ++A+ +F E+ ++ DVVT+
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 327 SVIMDELCK----------------------------------NGKMDKASRLLELMIWR 352
+ ++ C+ NGK+D+A+ + LM +
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 353 GVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWYCKNKDVEEA 412
G + TY I G C+ ++ A + +ES+G DV +Y ++I+ CK K +EEA
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 413 LSLYSEMLSKGI-----------------------------------KPTVVTYNTLFLG 437
+L EM G+ +PTVV+YN L G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 438 LFEIHQVERALKLFDEMRRNHVAADTYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELN 497
L + + A EM N D TY+ + GLC+ + ALEL+ S E +
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 498 IVSYNCLIDGL 508
++ +N LI GL
Sbjct: 569 VMMHNILIHGL 579
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 194/444 (43%), Gaps = 63/444 (14%)
Query: 90 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILI 149
A+ ++D +L P V + NI+ L+K D L +++R+ D+YT+S LI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 150 NCFCKMGRVSH-------------------------GF---------VVLGRILRSCFTP 175
+ C G V GF + L RI+ +
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Query: 176 NAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCRTGHTIVALNLF 235
N V++ LIKGL +I EA ++ D TY I+GLC G+ AL +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 236 EEMANGNGEFGV---------VCKP--------------------NTVTYNTIIDGLCKE 266
+E+ + G V +CK N+ N +I GL ++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 267 GFVDKAKELFLKMKDENINPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTF 326
+ +A +M P VV+Y +I G C A + EA EM++ G +PD+ T+
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 327 SVIMDELCKNGKMDKASRLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMES 386
S+++ LC++ K+D A L + G+ + +N LI G C K+D A + +ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 387 NGCMHDVVSYNTLINWYCKNKDVEEALSLYSEMLSKGIKPTVVTYNTLFLGLFEIHQVER 446
C ++V+YNTL+ + K D A ++ M G++P +++YNT+ GL V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 447 ALKLFDEMRRNHVAADTYTYNNFI 470
A++ FD+ R + + YT+N +
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 173/346 (50%), Gaps = 27/346 (7%)
Query: 175 PNAVTFTSLIKGLCAESRIMEAAALF---TKHRVFACEPDVFTY-------NTLINGLCR 224
P +++ ++K L +E A ALF T+H +A V+ + ++N + R
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDE-N 283
IV L +E CK + ++I K D+A ++F +M++
Sbjct: 65 ----IVELIRSQE-----------CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFG 109
Query: 284 INPDVVTYTSVIRGFCYANDWNEAKRLFIEMMDQGVQPDVVTFSVIMDELCKNGKMDKAS 343
P + +Y +++ F A W + + LF GV P++ T++V++ CK + +KA
Sbjct: 110 CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKAR 169
Query: 344 RLLELMIWRGVNPNTYTYNTLIDGYCLTDKIDHARKLFVSMESNGCMHDVVSYNTLINWY 403
L+ M G P+ ++Y+T+I+ K+D A +LF M G DV YN LI+ +
Sbjct: 170 GFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF 229
Query: 404 CKNKDVEEALSLYSEMLS-KGIKPTVVTYNTLFLGLFEIHQVERALKLFDEMRRNHVAAD 462
K KD + A+ L+ +L + P V T+N + GL + +V+ LK+++ M++N D
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 463 TYTYNNFIDGLCKSGFVLEALELFRAIRDSKYELNIVSYNCLIDGL 508
YTY++ I GLC +G V +A +F + + K +++V+YN ++ G
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVSHGFVV 164
P V S+NIL L K + + K + G PD+ T+SIL+ C+ ++ +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 165 LGRILRSCFTPNAVTFTSLIKGLCAESRIMEAAALFTKHRVFACEPDVFTYNTLINGLCR 224
+ L+S + + LI GLC+ ++ +A + C ++ TYNTL+ G +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 225 TGHTIVALNLFEEMANGNGEFGVVCKPNTVTYNTIIDGLCKEGFVDKAKELFLKMKDENI 284
G + A ++ M + + +P+ ++YNTI+ GLC V A E F ++ I
Sbjct: 617 VGDSNRATVIWGYM------YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 285 NPDVVTYTSVIRG 297
P V T+ ++R
Sbjct: 671 FPTVYTWNILVRA 683
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSAGLFPDIYTHSILINCFCKMGRVS----- 159
P + +++IL L +++ D L L+ + +GL D+ H+ILI+ C +G++
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 160 --------------------HGF----------VVLGRILRSCFTPNAVTFTSLIKGLCA 189
GF V+ G + + P+ +++ +++KGLC
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 190 ESRIMEAAALFTKHRVFACEPDVFTYNTLINGL 222
+ A F R P V+T+N L+ +
Sbjct: 652 CRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,725,256
Number of Sequences: 539616
Number of extensions: 7328309
Number of successful extensions: 31784
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 18977
Number of HSP's gapped (non-prelim): 3125
length of query: 508
length of database: 191,569,459
effective HSP length: 122
effective length of query: 386
effective length of database: 125,736,307
effective search space: 48534214502
effective search space used: 48534214502
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)