Query 044045
Match_columns 215
No_of_seqs 320 out of 1819
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 19:04:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044045.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044045hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 2.9E-50 1E-54 332.7 21.3 192 21-214 1-196 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 1.3E-31 4.3E-36 245.1 13.9 153 57-214 288-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 1.9E-30 6.5E-35 238.9 17.0 155 55-214 321-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 8.5E-31 2.9E-35 239.6 13.1 147 63-214 295-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 3.6E-30 1.2E-34 235.9 13.6 147 63-214 294-442 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 6E-30 2E-34 235.9 12.8 154 56-214 358-514 (531)
7 1uij_A Beta subunit of beta co 100.0 1E-28 3.5E-33 224.1 15.7 159 50-214 209-383 (416)
8 2cav_A Protein (canavalin); vi 100.0 7.4E-29 2.5E-33 226.6 14.6 157 51-213 242-411 (445)
9 3c3v_A Arachin ARAH3 isoform; 100.0 2.4E-28 8.2E-33 225.7 16.3 147 63-214 344-492 (510)
10 1fxz_A Glycinin G1; proglycini 100.0 3.7E-28 1.3E-32 223.5 17.3 147 63-214 310-458 (476)
11 2d5f_A Glycinin A3B4 subunit; 100.0 1.9E-28 6.6E-33 226.2 13.2 146 63-214 339-484 (493)
12 2ea7_A 7S globulin-1; beta bar 100.0 3.7E-28 1.3E-32 221.4 14.9 160 49-214 225-399 (434)
13 3s7i_A Allergen ARA H 1, clone 99.9 2.2E-27 7.5E-32 215.2 12.7 155 54-214 226-408 (418)
14 1dgw_A Canavalin; duplicated s 99.9 2.4E-26 8E-31 186.3 14.9 150 54-213 2-166 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 5.4E-25 1.8E-29 198.3 14.0 144 58-214 213-371 (397)
16 2vqa_A SLL1358 protein, MNCA; 99.9 1.3E-23 4.6E-28 185.9 17.9 158 48-214 194-351 (361)
17 2e9q_A 11S globulin subunit be 99.9 1.2E-23 4.1E-28 192.6 13.4 139 71-214 44-235 (459)
18 2cav_A Protein (canavalin); vi 99.9 2.5E-23 8.5E-28 190.1 15.2 155 52-214 45-212 (445)
19 2ea7_A 7S globulin-1; beta bar 99.9 2.6E-23 8.9E-28 189.5 14.3 152 53-212 20-185 (434)
20 1uij_A Beta subunit of beta co 99.9 4.3E-23 1.5E-27 187.2 13.2 152 53-212 8-173 (416)
21 2phl_A Phaseolin; plant SEED s 99.9 6E-23 2.1E-27 185.0 12.8 152 53-212 11-181 (397)
22 1fxz_A Glycinin G1; proglycini 99.9 9.4E-23 3.2E-27 187.5 13.3 139 71-214 29-227 (476)
23 3ksc_A LEGA class, prolegumin; 99.9 2.3E-22 7.7E-27 185.2 14.0 136 71-212 27-214 (496)
24 3qac_A 11S globulin SEED stora 99.9 1.9E-22 6.5E-27 184.5 13.0 139 70-214 30-237 (465)
25 3s7i_A Allergen ARA H 1, clone 99.9 3.4E-22 1.2E-26 181.2 13.7 135 69-212 19-168 (418)
26 2d5f_A Glycinin A3B4 subunit; 99.9 6.7E-22 2.3E-26 182.5 13.7 138 72-214 27-230 (493)
27 3kgl_A Cruciferin; 11S SEED gl 99.9 2.4E-21 8.1E-26 177.2 12.3 140 70-214 23-245 (466)
28 3c3v_A Arachin ARAH3 isoform; 99.9 3.1E-21 1.1E-25 178.2 13.0 139 71-214 29-269 (510)
29 2vqa_A SLL1358 protein, MNCA; 99.8 4.1E-20 1.4E-24 163.5 18.2 149 55-213 20-171 (361)
30 3fz3_A Prunin; TREE NUT allerg 99.8 2.2E-20 7.6E-25 172.2 12.1 140 70-214 28-297 (531)
31 1j58_A YVRK protein; cupin, de 99.8 3.3E-19 1.1E-23 159.2 18.6 154 51-214 221-374 (385)
32 1j58_A YVRK protein; cupin, de 99.8 1E-18 3.5E-23 155.9 13.7 147 56-213 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 2.9E-19 9.8E-24 126.6 5.1 74 57-131 3-76 (79)
34 3h8u_A Uncharacterized conserv 99.6 9.1E-15 3.1E-19 110.1 11.0 84 90-179 38-121 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.6 8E-15 2.7E-19 123.8 10.1 117 51-171 7-137 (239)
36 1lr5_A Auxin binding protein 1 99.6 4.3E-14 1.5E-18 111.6 12.4 116 90-210 40-158 (163)
37 3l2h_A Putative sugar phosphat 99.5 4.9E-14 1.7E-18 111.1 12.4 86 90-182 45-132 (162)
38 2fqp_A Hypothetical protein BP 99.5 3.8E-14 1.3E-18 102.7 9.5 77 89-170 16-92 (97)
39 1v70_A Probable antibiotics sy 99.5 1.4E-13 4.7E-18 99.1 11.0 78 88-172 25-102 (105)
40 3es1_A Cupin 2, conserved barr 99.5 9.9E-14 3.4E-18 111.6 10.3 81 89-177 77-157 (172)
41 3i7d_A Sugar phosphate isomera 99.5 2.1E-13 7.1E-18 108.4 11.6 87 89-182 41-130 (163)
42 3ibm_A Cupin 2, conserved barr 99.5 9.2E-13 3.1E-17 105.1 15.4 118 48-174 11-132 (167)
43 2oa2_A BH2720 protein; 1017534 99.5 4E-13 1.4E-17 104.6 12.8 85 89-174 41-125 (148)
44 3ht1_A REMF protein; cupin fol 99.5 2.9E-13 1E-17 103.7 11.6 83 89-179 37-121 (145)
45 2gu9_A Tetracenomycin polyketi 99.5 5.7E-13 2E-17 97.5 11.3 78 89-173 19-98 (113)
46 1x82_A Glucose-6-phosphate iso 99.4 2.1E-12 7E-17 105.1 14.6 99 73-174 50-156 (190)
47 2bnm_A Epoxidase; oxidoreducta 99.4 9.8E-13 3.4E-17 106.5 12.3 84 84-171 110-197 (198)
48 3fjs_A Uncharacterized protein 99.4 4.4E-13 1.5E-17 100.2 9.1 74 88-169 33-106 (114)
49 4e2g_A Cupin 2 conserved barre 99.4 6.7E-13 2.3E-17 99.8 9.9 77 89-174 39-115 (126)
50 1o4t_A Putative oxalate decarb 99.4 9.9E-13 3.4E-17 100.7 10.8 77 88-171 54-130 (133)
51 3lag_A Uncharacterized protein 99.4 1.1E-13 3.7E-18 101.3 5.1 79 88-170 14-92 (98)
52 3kgz_A Cupin 2 conserved barre 99.4 9.3E-13 3.2E-17 104.2 10.8 79 89-175 42-120 (156)
53 3jzv_A Uncharacterized protein 99.4 1.4E-12 4.9E-17 104.2 10.7 78 89-174 51-128 (166)
54 2b8m_A Hypothetical protein MJ 99.4 1.7E-12 5.9E-17 96.5 10.4 74 90-171 26-100 (117)
55 2vpv_A Protein MIF2, MIF2P; nu 99.4 1.8E-12 6E-17 103.7 10.4 75 90-171 87-162 (166)
56 2pfw_A Cupin 2, conserved barr 99.4 2.4E-12 8.3E-17 95.2 10.1 77 90-176 33-109 (116)
57 2f4p_A Hypothetical protein TM 99.4 8.2E-12 2.8E-16 97.3 13.6 78 88-173 45-123 (147)
58 4i4a_A Similar to unknown prot 99.4 6.8E-12 2.3E-16 94.4 12.1 75 89-171 32-106 (128)
59 1vj2_A Novel manganese-contain 99.4 1.8E-12 6.3E-17 98.1 8.8 77 88-172 45-121 (126)
60 1y9q_A Transcriptional regulat 99.4 4.3E-12 1.5E-16 102.4 10.6 77 87-172 100-178 (192)
61 2o8q_A Hypothetical protein; c 99.3 4.8E-12 1.6E-16 96.2 10.1 79 91-176 43-121 (134)
62 2ozi_A Hypothetical protein RP 99.3 1.1E-12 3.8E-17 96.1 6.2 77 90-170 16-92 (98)
63 1yhf_A Hypothetical protein SP 99.3 8.3E-12 2.9E-16 92.1 10.8 73 89-171 38-110 (115)
64 3cew_A Uncharacterized cupin p 99.3 6E-12 2E-16 94.7 10.0 79 88-173 23-102 (125)
65 1rc6_A Hypothetical protein YL 99.3 5.7E-12 1.9E-16 106.9 10.1 78 88-172 176-254 (261)
66 3h7j_A Bacilysin biosynthesis 99.3 8.5E-12 2.9E-16 104.9 10.2 81 90-178 144-225 (243)
67 2q30_A Uncharacterized protein 99.3 2.5E-11 8.7E-16 88.4 9.8 76 89-172 31-107 (110)
68 2ozj_A Cupin 2, conserved barr 99.3 2.9E-11 9.8E-16 89.4 10.0 72 90-171 37-108 (114)
69 1sef_A Conserved hypothetical 99.3 4.8E-11 1.7E-15 102.0 12.9 76 88-171 179-256 (274)
70 1y3t_A Hypothetical protein YX 99.2 4.1E-11 1.4E-15 104.1 11.2 78 89-174 44-121 (337)
71 1sq4_A GLXB, glyoxylate-induce 99.2 3.1E-11 1E-15 103.7 9.8 77 88-172 65-143 (278)
72 1sfn_A Conserved hypothetical 99.2 1E-10 3.5E-15 98.6 12.7 76 88-171 162-238 (246)
73 1rc6_A Hypothetical protein YL 99.2 3.8E-11 1.3E-15 101.8 9.7 77 89-172 57-134 (261)
74 3lwc_A Uncharacterized protein 99.2 5E-11 1.7E-15 90.1 9.3 74 89-172 38-111 (119)
75 1juh_A Quercetin 2,3-dioxygena 99.2 1.7E-10 5.8E-15 102.1 12.9 81 90-174 47-130 (350)
76 3h7j_A Bacilysin biosynthesis 99.2 6.1E-11 2.1E-15 99.6 9.6 73 91-171 34-107 (243)
77 4e2q_A Ureidoglycine aminohydr 99.2 5.6E-11 1.9E-15 101.6 9.1 106 48-172 37-142 (266)
78 1sef_A Conserved hypothetical 99.2 6.7E-11 2.3E-15 101.1 9.2 78 88-172 59-137 (274)
79 1y3t_A Hypothetical protein YX 99.2 3.7E-10 1.3E-14 98.0 13.4 75 93-175 219-294 (337)
80 2pyt_A Ethanolamine utilizatio 99.2 9E-11 3.1E-15 90.4 8.3 71 90-172 56-126 (133)
81 2opk_A Hypothetical protein; p 99.2 1.9E-10 6.4E-15 85.6 9.7 75 89-172 29-109 (112)
82 2i45_A Hypothetical protein; n 99.1 8E-11 2.7E-15 86.1 7.3 69 93-170 30-98 (107)
83 2d40_A Z3393, putative gentisa 99.1 7.5E-11 2.5E-15 104.6 8.2 77 89-172 98-174 (354)
84 3rns_A Cupin 2 conserved barre 99.1 2.3E-10 7.8E-15 95.2 9.9 73 90-171 152-224 (227)
85 2d40_A Z3393, putative gentisa 99.1 5E-10 1.7E-14 99.3 11.7 89 71-171 249-338 (354)
86 1sq4_A GLXB, glyoxylate-induce 99.1 7.3E-10 2.5E-14 95.1 12.3 85 81-173 181-266 (278)
87 4b29_A Dimethylsulfoniopropion 99.1 4.3E-10 1.5E-14 93.1 9.5 77 88-172 129-205 (217)
88 3rns_A Cupin 2 conserved barre 99.1 6.2E-10 2.1E-14 92.6 10.4 73 90-172 36-108 (227)
89 4e2q_A Ureidoglycine aminohydr 99.1 3.3E-09 1.1E-13 90.7 14.9 86 73-170 172-258 (266)
90 3d82_A Cupin 2, conserved barr 99.1 4.1E-10 1.4E-14 80.8 7.8 59 102-169 40-98 (102)
91 4h7l_A Uncharacterized protein 99.0 1.2E-09 4E-14 86.4 10.2 70 91-173 47-118 (157)
92 4axo_A EUTQ, ethanolamine util 99.0 7.7E-10 2.6E-14 87.1 8.6 72 90-173 65-136 (151)
93 3bu7_A Gentisate 1,2-dioxygena 99.0 1.7E-09 5.9E-14 97.1 11.5 78 88-172 120-198 (394)
94 3bu7_A Gentisate 1,2-dioxygena 99.0 4.9E-09 1.7E-13 94.2 14.1 91 72-171 276-367 (394)
95 3nw4_A Gentisate 1,2-dioxygena 99.0 1.1E-09 3.7E-14 97.6 8.8 77 89-172 101-177 (368)
96 1vr3_A Acireductone dioxygenas 98.9 1.3E-08 4.4E-13 83.0 12.7 84 92-179 75-168 (191)
97 1o5u_A Novel thermotoga mariti 98.9 1.6E-09 5.5E-14 79.5 6.6 64 95-167 35-98 (101)
98 1sfn_A Conserved hypothetical 98.9 2.9E-09 9.8E-14 89.7 8.7 71 89-171 48-118 (246)
99 3bcw_A Uncharacterized protein 98.8 3.8E-09 1.3E-13 80.3 6.2 68 90-165 48-115 (123)
100 1dgw_Y Canavalin; duplicated s 98.8 2.8E-08 9.7E-13 71.9 10.3 74 136-214 5-82 (93)
101 2q1z_B Anti-sigma factor CHRR, 98.8 1.4E-08 4.8E-13 82.9 8.4 70 91-172 125-194 (195)
102 1yfu_A 3-hydroxyanthranilate-3 98.8 4.6E-08 1.6E-12 78.1 11.1 67 90-161 35-101 (174)
103 3ebr_A Uncharacterized RMLC-li 98.8 2E-08 6.7E-13 79.6 8.4 87 71-172 27-115 (159)
104 3eqe_A Putative cystein deoxyg 98.7 2.3E-07 7.8E-12 74.3 13.8 87 90-177 68-157 (171)
105 1juh_A Quercetin 2,3-dioxygena 98.7 6.6E-08 2.3E-12 85.4 11.4 78 87-172 245-325 (350)
106 1zrr_A E-2/E-2' protein; nicke 98.7 1.3E-08 4.5E-13 82.1 4.9 70 104-178 93-162 (179)
107 2o1q_A Putative acetyl/propion 98.7 1.1E-08 3.7E-13 79.6 4.0 77 90-174 43-120 (145)
108 3cjx_A Protein of unknown func 98.7 4.1E-08 1.4E-12 78.3 6.7 74 90-172 42-117 (165)
109 2y0o_A Probable D-lyxose ketol 98.6 9.3E-08 3.2E-12 76.8 7.7 82 91-174 53-154 (175)
110 2gm6_A Cysteine dioxygenase ty 98.5 1.6E-06 5.5E-11 71.4 13.4 83 90-173 78-167 (208)
111 1zvf_A 3-hydroxyanthranilate 3 98.5 5E-07 1.7E-11 72.1 9.6 59 99-161 42-104 (176)
112 3nw4_A Gentisate 1,2-dioxygena 98.5 9.9E-07 3.4E-11 78.5 12.5 87 72-170 260-348 (368)
113 3st7_A Capsular polysaccharide 98.5 7E-07 2.4E-11 77.9 10.5 77 92-171 273-353 (369)
114 2arc_A ARAC, arabinose operon 98.5 1.3E-06 4.5E-11 67.1 10.6 58 105-170 32-90 (164)
115 3d0j_A Uncharacterized protein 98.5 4.9E-07 1.7E-11 69.7 7.6 76 93-170 27-107 (140)
116 3o14_A Anti-ecfsigma factor, C 98.4 1.2E-06 4.3E-11 72.8 9.3 85 71-173 27-111 (223)
117 3bal_A Acetylacetone-cleaving 98.3 5.9E-07 2E-11 70.6 5.5 89 71-171 31-119 (153)
118 3eln_A Cysteine dioxygenase ty 98.3 1.7E-05 5.8E-10 64.9 14.3 88 90-177 69-163 (200)
119 2qnk_A 3-hydroxyanthranilate 3 98.3 2.3E-06 7.7E-11 73.1 9.2 60 99-162 39-98 (286)
120 3uss_A Putative uncharacterize 98.1 0.00013 4.3E-09 60.2 14.2 85 90-175 72-163 (211)
121 3myx_A Uncharacterized protein 98.0 4.9E-05 1.7E-09 63.7 11.5 72 90-172 46-117 (238)
122 3es4_A Uncharacterized protein 97.9 4.7E-05 1.6E-09 57.0 8.3 64 91-162 42-105 (116)
123 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.9 0.00023 7.8E-09 55.0 12.1 94 72-171 17-112 (141)
124 3ejk_A DTDP sugar isomerase; Y 97.8 0.00024 8.1E-09 56.8 11.5 76 97-172 59-141 (174)
125 3myx_A Uncharacterized protein 97.6 0.00026 8.7E-09 59.4 9.7 64 90-161 166-229 (238)
126 1yud_A Hypothetical protein SO 97.5 0.0034 1.1E-07 49.9 13.5 133 69-213 26-166 (170)
127 3gbg_A TCP pilus virulence reg 97.3 0.001 3.6E-08 55.4 9.5 73 90-168 6-82 (276)
128 3o14_A Anti-ecfsigma factor, C 97.2 0.00042 1.4E-08 57.4 5.9 78 71-169 133-210 (223)
129 2vec_A YHAK, pirin-like protei 97.2 0.0025 8.5E-08 53.9 10.5 71 93-169 66-139 (256)
130 3kmh_A D-lyxose isomerase; cup 97.0 0.005 1.7E-07 51.3 9.8 78 91-168 106-204 (246)
131 1tq5_A Protein YHHW; bicupin, 96.9 0.0059 2E-07 51.1 9.8 71 93-169 43-116 (242)
132 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.8 0.015 5E-07 46.8 10.8 70 99-169 56-133 (185)
133 3ryk_A DTDP-4-dehydrorhamnose 96.7 0.011 3.9E-07 48.2 10.1 69 99-168 78-155 (205)
134 2ixk_A DTDP-4-dehydrorhamnose 96.7 0.024 8.3E-07 45.4 11.6 70 99-169 57-134 (184)
135 3bb6_A Uncharacterized protein 96.7 0.014 4.9E-07 44.0 9.6 68 99-168 22-95 (127)
136 1dzr_A DTDP-4-dehydrorhamnose 96.7 0.02 6.9E-07 45.9 11.1 69 99-168 55-132 (183)
137 1wlt_A 176AA long hypothetical 96.7 0.02 6.7E-07 46.5 11.0 70 98-168 72-150 (196)
138 1vrb_A Putative asparaginyl hy 96.5 0.022 7.4E-07 49.8 11.2 73 96-169 145-250 (342)
139 4gjz_A Lysine-specific demethy 96.5 0.0082 2.8E-07 48.4 7.8 66 96-162 128-226 (235)
140 1oi6_A PCZA361.16; epimerase, 96.4 0.038 1.3E-06 45.0 11.2 70 99-169 55-133 (205)
141 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.4 0.019 6.6E-07 46.5 9.2 72 98-171 67-142 (197)
142 2c0z_A NOVW; isomerase, epimer 96.4 0.036 1.2E-06 45.5 10.8 69 99-168 63-140 (216)
143 1upi_A DTDP-4-dehydrorhamnose 96.3 0.06 2E-06 44.5 11.7 69 99-168 74-151 (225)
144 2qdr_A Uncharacterized protein 96.3 0.039 1.3E-06 46.6 10.6 86 69-172 75-161 (303)
145 4hn1_A Putative 3-epimerase in 96.1 0.067 2.3E-06 43.5 11.1 69 99-168 52-129 (201)
146 3d8c_A Hypoxia-inducible facto 96.0 0.037 1.3E-06 48.4 9.6 74 96-170 187-295 (349)
147 1eyb_A Homogentisate 1,2-dioxy 95.7 0.04 1.4E-06 50.0 8.9 55 106-169 172-226 (471)
148 2qnk_A 3-hydroxyanthranilate 3 95.6 0.038 1.3E-06 47.1 7.9 57 98-163 214-270 (286)
149 2p17_A Pirin-like protein; GK1 95.3 0.13 4.5E-06 43.6 10.4 80 97-182 45-133 (277)
150 3al5_A HTYW5, JMJC domain-cont 95.3 0.06 2.1E-06 46.8 8.3 71 96-169 171-270 (338)
151 1e5r_A Proline oxidase; oxidor 95.3 0.024 8.2E-07 48.6 5.5 70 91-164 91-167 (290)
152 2xdv_A MYC-induced nuclear ant 95.0 0.2 6.8E-06 45.3 11.2 64 97-161 144-223 (442)
153 4diq_A Lysine-specific demethy 94.9 0.24 8.2E-06 45.4 11.5 72 96-168 168-259 (489)
154 1j1l_A Pirin; beta sandwich, c 94.6 0.25 8.4E-06 42.2 10.3 83 93-182 42-135 (290)
155 3k2o_A Bifunctional arginine d 94.6 0.14 4.9E-06 44.6 8.9 77 97-173 177-292 (336)
156 2qjv_A Uncharacterized IOLB-li 94.6 0.29 1E-05 41.4 10.5 82 90-174 152-248 (270)
157 2yu1_A JMJC domain-containing 94.4 0.076 2.6E-06 48.2 6.8 77 99-175 204-304 (451)
158 1xru_A 4-deoxy-L-threo-5-hexos 94.1 0.53 1.8E-05 40.1 11.0 81 90-175 179-266 (282)
159 3kv5_D JMJC domain-containing 94.0 0.1 3.6E-06 47.8 6.8 64 99-162 274-361 (488)
160 3rcq_A Aspartyl/asparaginyl be 93.9 0.23 7.9E-06 40.1 8.1 89 81-177 91-185 (197)
161 3kv4_A PHD finger protein 8; e 93.8 0.21 7.2E-06 45.3 8.5 65 99-163 239-327 (447)
162 3k3o_A PHF8, PHD finger protei 93.3 0.2 6.9E-06 44.3 7.3 64 99-162 155-242 (371)
163 3kv9_A JMJC domain-containing 92.9 0.14 4.6E-06 45.8 5.6 64 99-162 183-270 (397)
164 2oyz_A UPF0345 protein VPA0057 92.8 0.76 2.6E-05 32.7 8.3 65 96-170 28-92 (94)
165 1pmi_A PMI, phosphomannose iso 91.9 0.61 2.1E-05 42.1 8.7 76 90-171 356-437 (440)
166 3pua_A GRC5, PHD finger protei 91.9 0.34 1.2E-05 43.2 6.9 64 99-162 182-269 (392)
167 2rg4_A Uncharacterized protein 91.7 0.45 1.6E-05 38.6 7.0 78 93-172 105-204 (216)
168 1ywk_A 4-deoxy-L-threo-5-hexos 91.7 0.81 2.8E-05 39.0 8.7 81 90-175 179-266 (289)
169 3hqx_A UPF0345 protein aciad03 91.2 1.1 3.8E-05 32.8 7.8 68 96-171 42-109 (111)
170 3pur_A Lysine-specific demethy 91.0 0.32 1.1E-05 44.9 5.8 64 99-162 304-391 (528)
171 3dl3_A Tellurite resistance pr 91.0 1.5 5.2E-05 32.5 8.5 65 103-169 28-94 (119)
172 1qwr_A Mannose-6-phosphate iso 90.1 1.1 3.7E-05 38.6 8.2 55 90-154 250-304 (319)
173 2wfp_A Mannose-6-phosphate iso 89.5 0.5 1.7E-05 42.0 5.7 55 90-154 323-377 (394)
174 1tq5_A Protein YHHW; bicupin, 89.3 2.7 9.2E-05 34.7 9.7 68 89-169 158-225 (242)
175 1j1l_A Pirin; beta sandwich, c 88.6 7.1 0.00024 33.0 12.1 77 88-171 166-242 (290)
176 2vec_A YHAK, pirin-like protei 88.6 3.1 0.00011 34.7 9.7 71 89-168 180-250 (256)
177 2ypd_A Probable JMJC domain-co 88.4 0.47 1.6E-05 42.1 4.6 41 135-175 291-331 (392)
178 3m3i_A Putative uncharacterize 88.2 9.6 0.00033 31.2 13.4 150 49-213 17-211 (225)
179 3eo6_A Protein of unknown func 87.9 1.4 4.9E-05 32.0 6.1 56 96-159 41-96 (106)
180 2pqq_A Putative transcriptiona 87.7 1.6 5.4E-05 31.4 6.6 52 94-147 29-80 (149)
181 1zx5_A Mannosephosphate isomer 86.6 2.8 9.7E-05 35.7 8.4 56 90-157 229-285 (300)
182 3loi_A Putative uncharacterize 86.4 10 0.00035 29.7 15.1 130 69-213 24-169 (172)
183 3mdp_A Cyclic nucleotide-bindi 86.1 1.5 5.2E-05 31.3 5.7 54 93-148 29-85 (142)
184 3dn7_A Cyclic nucleotide bindi 85.1 3.1 0.00011 31.6 7.4 53 94-148 31-83 (194)
185 2oz6_A Virulence factor regula 84.8 3.2 0.00011 31.8 7.4 53 94-148 14-66 (207)
186 2p17_A Pirin-like protein; GK1 84.6 4.1 0.00014 34.3 8.4 72 88-170 164-240 (277)
187 4ev0_A Transcription regulator 83.8 3.2 0.00011 32.0 7.0 53 94-148 23-75 (216)
188 3fx3_A Cyclic nucleotide-bindi 83.6 3.4 0.00012 32.4 7.2 52 94-147 35-86 (237)
189 3ryp_A Catabolite gene activat 83.6 3.9 0.00013 31.3 7.4 53 94-148 20-72 (210)
190 3idb_B CAMP-dependent protein 83.3 3.8 0.00013 30.2 7.0 52 93-147 61-112 (161)
191 3gyd_A CNMP-BD protein, cyclic 83.3 3.4 0.00012 31.6 6.9 53 93-147 62-114 (187)
192 3iwz_A CAP-like, catabolite ac 83.0 3.7 0.00013 31.9 7.1 53 94-148 35-87 (230)
193 3d0s_A Transcriptional regulat 82.8 4.2 0.00014 31.7 7.4 52 95-148 31-82 (227)
194 3e97_A Transcriptional regulat 82.7 3.6 0.00012 32.2 7.0 54 93-148 29-82 (231)
195 1zx5_A Mannosephosphate isomer 82.1 0.99 3.4E-05 38.5 3.6 47 112-158 117-179 (300)
196 2z69_A DNR protein; beta barre 81.8 1.5 5E-05 31.9 4.0 53 93-147 35-87 (154)
197 3b02_A Transcriptional regulat 81.5 3.4 0.00012 31.5 6.3 50 97-148 3-52 (195)
198 1zyb_A Transcription regulator 81.2 3.3 0.00011 32.7 6.2 53 93-147 43-95 (232)
199 1qwr_A Mannose-6-phosphate iso 80.8 1.2 4E-05 38.4 3.6 47 112-158 117-179 (319)
200 1ft9_A Carbon monoxide oxidati 80.8 8.1 0.00028 30.0 8.4 68 94-168 24-91 (222)
201 3la7_A Global nitrogen regulat 80.6 4.8 0.00016 32.0 7.1 55 92-148 42-96 (243)
202 2gau_A Transcriptional regulat 80.4 3.2 0.00011 32.5 5.9 53 93-147 33-85 (232)
203 3kcc_A Catabolite gene activat 80.2 5.4 0.00018 32.1 7.4 53 94-148 70-122 (260)
204 2qjv_A Uncharacterized IOLB-li 79.6 25 0.00086 29.5 11.3 81 75-169 16-107 (270)
205 1o5l_A Transcriptional regulat 79.6 3.7 0.00013 31.9 6.0 52 94-147 23-74 (213)
206 2fmy_A COOA, carbon monoxide o 79.0 11 0.00036 29.2 8.5 68 94-168 28-95 (220)
207 3dv8_A Transcriptional regulat 78.6 5.5 0.00019 30.7 6.7 53 94-148 27-79 (220)
208 2zcw_A TTHA1359, transcription 78.1 4.6 0.00016 30.9 6.0 71 96-170 8-84 (202)
209 3e6c_C CPRK, cyclic nucleotide 77.4 5.6 0.00019 31.6 6.6 53 94-148 33-85 (250)
210 1znp_A Hypothetical protein AT 76.6 24 0.0008 27.2 12.6 96 69-169 19-121 (154)
211 2wfp_A Mannose-6-phosphate iso 76.6 2.1 7E-05 38.0 3.9 24 136-159 239-262 (394)
212 2qcs_B CAMP-dependent protein 74.2 10 0.00034 30.7 7.4 54 93-147 180-233 (291)
213 2bgc_A PRFA; bacterial infecti 73.1 9 0.00031 30.2 6.7 71 95-169 20-97 (238)
214 3g7d_A PHPD; non heme Fe(II) d 72.2 50 0.0017 28.9 12.1 41 115-158 357-397 (443)
215 2ptm_A Hyperpolarization-activ 71.1 9.1 0.00031 29.2 6.1 49 93-147 94-142 (198)
216 3bpz_A Potassium/sodium hyperp 69.5 8.4 0.00029 29.6 5.6 48 93-147 95-142 (202)
217 1pmi_A PMI, phosphomannose iso 68.3 4.1 0.00014 36.6 3.9 23 137-159 266-288 (440)
218 4f8a_A Potassium voltage-gated 68.2 15 0.00051 26.5 6.5 49 94-149 51-99 (160)
219 3pna_A CAMP-dependent protein 65.6 18 0.00062 26.1 6.6 48 93-147 61-108 (154)
220 4ava_A Lysine acetyltransferas 65.1 13 0.00044 30.8 6.2 51 94-147 37-87 (333)
221 3ocp_A PRKG1 protein; serine/t 63.5 21 0.00073 25.1 6.5 47 94-147 47-93 (139)
222 3shr_A CGMP-dependent protein 63.1 16 0.00054 29.7 6.3 52 94-147 181-233 (299)
223 3dkw_A DNR protein; CRP-FNR, H 62.1 3.1 0.00011 32.3 1.7 53 94-148 33-85 (227)
224 2xxz_A Lysine-specific demethy 61.8 8.7 0.0003 33.3 4.5 33 136-168 278-310 (332)
225 1ywk_A 4-deoxy-L-threo-5-hexos 61.4 74 0.0025 26.9 10.4 66 96-168 62-130 (289)
226 2d93_A RAP guanine nucleotide 59.7 13 0.00045 26.1 4.7 48 93-147 39-87 (134)
227 2bdr_A Ureidoglycolate hydrola 59.3 24 0.0008 27.6 6.3 66 105-170 72-141 (175)
228 1xsq_A Ureidoglycolate hydrola 59.3 19 0.00065 28.0 5.8 66 105-170 70-139 (168)
229 3tnp_B CAMP-dependent protein 57.7 29 0.00098 30.3 7.4 52 93-147 168-219 (416)
230 3ukn_A Novel protein similar t 57.4 17 0.00059 27.9 5.4 49 93-148 98-146 (212)
231 1vp6_A CNBD, cyclic-nucleotide 55.1 13 0.00046 26.0 4.0 45 94-147 35-79 (138)
232 1o7f_A CAMP-dependent RAP1 gua 54.9 24 0.00081 30.7 6.4 55 93-148 65-120 (469)
233 3of1_A CAMP-dependent protein 50.5 17 0.00058 28.2 4.3 47 94-147 31-77 (246)
234 2qcs_B CAMP-dependent protein 49.6 36 0.0012 27.2 6.3 47 94-147 63-109 (291)
235 4din_B CAMP-dependent protein 48.5 30 0.001 29.6 5.9 51 96-147 274-324 (381)
236 3of1_A CAMP-dependent protein 48.0 30 0.001 26.7 5.4 48 94-147 149-196 (246)
237 4ask_A Lysine-specific demethy 47.0 20 0.00068 32.8 4.5 29 136-164 312-340 (510)
238 3avr_A Lysine-specific demethy 45.3 32 0.0011 31.7 5.7 33 136-168 337-369 (531)
239 3shr_A CGMP-dependent protein 43.7 40 0.0014 27.2 5.7 48 93-147 62-109 (299)
240 1s4c_A Protein HI0227; double- 42.1 73 0.0025 23.8 6.6 56 104-159 60-134 (155)
241 3tnp_B CAMP-dependent protein 41.0 40 0.0014 29.3 5.6 53 93-147 290-348 (416)
242 1xru_A 4-deoxy-L-threo-5-hexos 39.1 53 0.0018 27.7 5.7 50 112-168 78-130 (282)
243 1yll_A PA5104, conserved hypot 38.7 28 0.00097 27.7 3.8 36 112-153 140-175 (200)
244 1wgp_A Probable cyclic nucleot 36.7 7.4 0.00025 27.5 0.0 48 96-147 32-82 (137)
245 1o7f_A CAMP-dependent RAP1 gua 36.6 57 0.002 28.2 5.9 46 96-147 364-409 (469)
246 3dkq_A PKHD-type hydroxylase S 33.0 48 0.0017 27.1 4.5 63 93-160 101-181 (243)
247 4f7z_A RAP guanine nucleotide 32.0 99 0.0034 30.0 7.2 55 92-147 64-119 (999)
248 1xe7_A YML079WP, hypothetical 31.2 2E+02 0.0068 22.9 12.5 146 50-212 27-198 (203)
249 4din_B CAMP-dependent protein 30.0 50 0.0017 28.2 4.3 48 93-147 153-200 (381)
250 3g7d_A PHPD; non heme Fe(II) d 29.3 82 0.0028 27.5 5.3 72 138-211 156-263 (443)
251 3nnf_A CURA; non-HAEM Fe(II)/a 29.3 56 0.0019 28.2 4.3 23 136-158 233-255 (344)
252 2qdr_A Uncharacterized protein 27.3 1.4E+02 0.0047 25.1 6.2 65 90-174 216-288 (303)
253 3cf6_E RAP guanine nucleotide 25.3 1E+02 0.0036 28.9 5.9 47 95-147 58-104 (694)
254 1wy3_A Villin; structural prot 22.9 63 0.0022 18.4 2.4 21 192-212 1-21 (35)
255 1iyc_A Scarabaecin; antifungal 22.4 15 0.0005 20.5 -0.4 11 39-49 23-33 (36)
256 4f7z_A RAP guanine nucleotide 22.2 96 0.0033 30.1 5.1 43 99-147 367-409 (999)
257 1eyb_A Homogentisate 1,2-dioxy 21.6 91 0.0031 28.2 4.4 51 95-156 347-398 (471)
258 1und_A Advillin, P92; actin bi 20.7 73 0.0025 18.3 2.4 21 192-212 3-23 (37)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=2.9e-50 Score=332.66 Aligned_cols=192 Identities=48% Similarity=0.832 Sum_probs=181.1
Q ss_pred cCCCCCcceeeeCCCCC-cccCCcccCCCccccCCcccccc-ccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEE
Q 044045 21 FEPSPLQDFCVADPSGS-ARVNGFACMDPKLAQANHFTFSG-LHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDY 98 (215)
Q Consensus 21 ~d~~~~~d~cv~~~~~~-~~~~g~~ck~p~~~~~~df~~~~-~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l 98 (215)
+||||||||||||++++ +++|||+|| |+.++++||+|++ +.+++++.+..|+.++.++..++|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999998 999999999 9999999999999 99999888999999999999999999999999999999
Q ss_pred cCCccCCCccCCCccEEEEEEeCEEEEEEEecC--CCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC
Q 044045 99 APWGVIPPHVHPRATEILTVIEGSLDVGFVTSN--PENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNP 176 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~--~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p 176 (215)
+||+..++|||++++|++||++|++++++.+.+ + ++++++.|++||+++||+|.+|+++|.|++++++++++++++|
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~-~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p 158 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSG-NKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNP 158 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGT-TCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCC-CeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCC
Confidence 999999999999889999999999999997541 1 3556899999999999999999999999999999999999999
Q ss_pred ceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 177 GVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 177 g~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
+.+.++.++|+.+|++++++|+++|+++++++++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~ 196 (201)
T 1fi2_A 159 GIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSK 196 (201)
T ss_dssp CCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred CeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHh
Confidence 99999999999988999999999999999999999864
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.97 E-value=1.3e-31 Score=245.11 Aligned_cols=153 Identities=16% Similarity=0.233 Sum_probs=137.8
Q ss_pred cccccc-CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCe
Q 044045 57 TFSGLH-VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENR 135 (215)
Q Consensus 57 ~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~ 135 (215)
.|+... ..++..++.|++++.+++.+||+|++++|++++++|.||++++||||++|+|++||++|+++++++++++ ++
T Consensus 288 ~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-~~ 366 (466)
T 3kgl_A 288 TDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNG-DR 366 (466)
T ss_dssp EEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTS-CE
T ss_pred cccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCC-cE
Confidence 455542 3334346788899999999999999999999999999999999999999999999999999999998865 57
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhc
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQLQT 213 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 213 (215)
++..+|++||+++||+|++|++ |.|++++.+++++++++|+...++ .++|++ +|++||+++|+++++++++|++
T Consensus 367 ~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk~ 442 (466)
T 3kgl_A 367 VFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVKF 442 (466)
T ss_dssp EEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHH
T ss_pred EEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHHh
Confidence 7899999999999999999998 778999999999999999999998 578886 9999999999999999999986
Q ss_pred C
Q 044045 214 K 214 (215)
Q Consensus 214 ~ 214 (215)
+
T Consensus 443 ~ 443 (466)
T 3kgl_A 443 N 443 (466)
T ss_dssp S
T ss_pred c
Confidence 4
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.97 E-value=1.9e-30 Score=238.87 Aligned_cols=155 Identities=19% Similarity=0.288 Sum_probs=138.0
Q ss_pred cccccccc-CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCC
Q 044045 55 HFTFSGLH-VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPE 133 (215)
Q Consensus 55 df~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~ 133 (215)
.+.++..+ ..++..++.|++++.+++.+||+|+++||++++++|.||++++|||||+|+|++||++|+++++++++++
T Consensus 321 ~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g- 399 (496)
T 3ksc_A 321 KLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG- 399 (496)
T ss_dssp CCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-
T ss_pred hhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC-
Confidence 34565542 3344457788899999999999999999999999999999999999999999999999999999998865
Q ss_pred CeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhh
Q 044045 134 NRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQL 211 (215)
Q Consensus 134 ~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l 211 (215)
++++.++|++||+++||+|++|++.|. ++++.+++++++++|+...++ .++|+. +|++||+++|+++.+++++|
T Consensus 400 ~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~L 475 (496)
T 3ksc_A 400 NTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQL 475 (496)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHH
Confidence 677888999999999999999998875 788999999999999999997 678875 99999999999999999999
Q ss_pred hcC
Q 044045 212 QTK 214 (215)
Q Consensus 212 ~~~ 214 (215)
+++
T Consensus 476 k~~ 478 (496)
T 3ksc_A 476 KSN 478 (496)
T ss_dssp HHS
T ss_pred Hhc
Confidence 863
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.97 E-value=8.5e-31 Score=239.60 Aligned_cols=147 Identities=19% Similarity=0.252 Sum_probs=135.7
Q ss_pred CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEc
Q 044045 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLK 142 (215)
Q Consensus 63 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~ 142 (215)
..+++.++.|++++.+++.+||+|+++|+++++++|.||++++|||||+|+|++||++|+++++++++++ ++++.++|+
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g-~~~f~~~l~ 373 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG-QSVFDEELS 373 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC-cEEEEEEec
Confidence 4455557889999999999999999999999999999999999999999999999999999999998865 678899999
Q ss_pred CCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 143 KGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
+||+++||+|++|++. .|++++.+++++++++|+...++ .++|+. +|++||+++|+++++++++|+++
T Consensus 374 ~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 374 RGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp TTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 9999999999999986 57889999999999999999998 678885 99999999999999999999874
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=3.6e-30 Score=235.90 Aligned_cols=147 Identities=15% Similarity=0.229 Sum_probs=135.7
Q ss_pred CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEc
Q 044045 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLK 142 (215)
Q Consensus 63 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~ 142 (215)
..+++.+..|++++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g-~~~~~~~l~ 372 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG-QSVFDGEVR 372 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-CEEEeeEEe
Confidence 3444447889999999999999999999999999999999999999999999999999999999998765 677778899
Q ss_pred CCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 143 KGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
+||+++||+|++|++.| |++++.+++++++++|+...++ .++|++ +|++||+++|+++++++++|+++
T Consensus 373 ~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~ 442 (459)
T 2e9q_A 373 EGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYG 442 (459)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999999 7889999999999999999998 778886 99999999999999999999863
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.96 E-value=6e-30 Score=235.87 Aligned_cols=154 Identities=21% Similarity=0.325 Sum_probs=135.2
Q ss_pred ccccccc-CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC
Q 044045 56 FTFSGLH-VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN 134 (215)
Q Consensus 56 f~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~ 134 (215)
+.|+..+ ..+++.|+.|++++.+++.+||+|+++++++++++|.||++++||||++++|++||++|+++++++++++ +
T Consensus 358 l~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G-~ 436 (531)
T 3fz3_A 358 LKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG-D 436 (531)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-C
T ss_pred eeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC-c
Confidence 4566652 4455668889999999999999999999999999999999999999999999999999999999998764 5
Q ss_pred eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhhh
Q 044045 135 RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 135 ~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 212 (215)
++++++|++||+++||+|++|+.. .+++.+.++++.++++|++..++ .++|++ +|++||+++|+++++++++|+
T Consensus 437 ~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~kLk 512 (531)
T 3fz3_A 437 AILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQLK 512 (531)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHHHH
Confidence 778999999999999999999776 46666777644466899999998 788886 999999999999999999998
Q ss_pred cC
Q 044045 213 TK 214 (215)
Q Consensus 213 ~~ 214 (215)
++
T Consensus 513 ~~ 514 (531)
T 3fz3_A 513 YN 514 (531)
T ss_dssp HS
T ss_pred hc
Confidence 74
No 7
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.96 E-value=1e-28 Score=224.15 Aligned_cols=159 Identities=21% Similarity=0.239 Sum_probs=140.2
Q ss_pred cccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEe
Q 044045 50 LAQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVT 129 (215)
Q Consensus 50 ~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~ 129 (215)
......+.|+++++++.+.+..| +++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|++++++++
T Consensus 209 g~~~~~~~~~l~~~~p~~~~~~G-~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~ 287 (416)
T 1uij_A 209 TISSEDEPFNLRSRNPIYSNNFG-KFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVG 287 (416)
T ss_dssp GGGCSSSCEETTSSCCSEECSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEE
T ss_pred CCCCcccceeccccCCCccCCCc-eEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEc
Confidence 34467899999988887755555 79999999999999999999999999999999999999999999999999999998
Q ss_pred cCCC----------C--eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeec---hhhhcCCCCCC
Q 044045 130 SNPE----------N--RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL-SSQNPGVITIA---NAVFGSNPSIA 193 (215)
Q Consensus 130 ~~~~----------~--~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p 193 (215)
+++. + +++..+|++||+++||+|++|++.|. +++.+++++ ++++|+...++ .++|+. +|
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p 362 (416)
T 1uij_A 288 IKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IE 362 (416)
T ss_dssp EC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SC
T ss_pred CCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CC
Confidence 8631 1 46677999999999999999999998 578888877 45699999997 688886 99
Q ss_pred HHHHHHHcCCCHHHHHhhhcC
Q 044045 194 DDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 194 ~~vl~~af~~~~~~v~~l~~~ 214 (215)
++||+++|+++++++++|++.
T Consensus 363 ~~vla~af~~~~~~v~~l~~~ 383 (416)
T 1uij_A 363 RQVQELAFPGSAQDVERLLKK 383 (416)
T ss_dssp HHHHHHHSSSCHHHHHHHTTS
T ss_pred HHHHHHHHCcCHHHHHHHHhc
Confidence 999999999999999999864
No 8
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.96 E-value=7.4e-29 Score=226.61 Aligned_cols=157 Identities=18% Similarity=0.176 Sum_probs=135.5
Q ss_pred ccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEec
Q 044045 51 AQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTS 130 (215)
Q Consensus 51 ~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~ 130 (215)
.....++|+++++++.++ ..|++++.+++.+||+|+++|+++++++|.||++.+|||||+++|++||++|+++++++++
T Consensus 242 ~~~~~~~~~l~~~~p~~~-~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~ 320 (445)
T 2cav_A 242 LSSQDKPFNLRSRDPIYS-NNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGL 320 (445)
T ss_dssp ----CCCEETTSSCCSEE-SSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC
T ss_pred CCCcccceeccccCCCcc-CCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeC
Confidence 445678999998888774 5566899999999999999999999999999999999999999999999999999999987
Q ss_pred CCC-------Ce--eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeec---hhhhcCCCCCCHHHH
Q 044045 131 NPE-------NR--LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL-SSQNPGVITIA---NAVFGSNPSIADDLL 197 (215)
Q Consensus 131 ~~~-------~~--~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p~~vl 197 (215)
++. ++ +++.+|++||+++||+|++|++.|. ++..+++.. ++++|+.+.++ .++|++ +|++||
T Consensus 321 ~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vl 395 (445)
T 2cav_A 321 EQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVS 395 (445)
T ss_dssp -----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHH
T ss_pred CCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHH
Confidence 521 23 6899999999999999999999998 457776654 56689999998 688886 999999
Q ss_pred HHHcCCCHHHHHhhhc
Q 044045 198 AKAFQLDKSVVGQLQT 213 (215)
Q Consensus 198 ~~af~~~~~~v~~l~~ 213 (215)
+++|+++++++++|++
T Consensus 396 a~af~v~~~~v~~l~~ 411 (445)
T 2cav_A 396 DLTFPGSGEEVEELLE 411 (445)
T ss_dssp HHHSSSCHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHh
Confidence 9999999999999975
No 9
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=2.4e-28 Score=225.71 Aligned_cols=147 Identities=22% Similarity=0.327 Sum_probs=134.5
Q ss_pred CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEc
Q 044045 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLK 142 (215)
Q Consensus 63 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~ 142 (215)
..+++.+..|++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G-~~~~~~~l~ 422 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG-NRVYDEELQ 422 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC-CEEEeEEEc
Confidence 3445557889999999999999999999999999999999999999999999999999999999998764 576778899
Q ss_pred CCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 143 KGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
+||+++||+|++|++.| +++.+.+++++.+.+|+...++ .++|++ +|++||+++|+++++++++|+++
T Consensus 423 ~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~ 492 (510)
T 3c3v_A 423 EGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNN 492 (510)
T ss_dssp TTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhh
Confidence 99999999999999999 8888888888878899999998 788986 99999999999999999999863
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=3.7e-28 Score=223.54 Aligned_cols=147 Identities=21% Similarity=0.320 Sum_probs=134.2
Q ss_pred CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEc
Q 044045 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLK 142 (215)
Q Consensus 63 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~ 142 (215)
..+++.+..|++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G-~~~~~~~l~ 388 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG-ERVFDGELQ 388 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC-CEEeeeEEc
Confidence 3344557889999999999999999999999999999999999999999999999999999999998764 566677899
Q ss_pred CCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeec--hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 143 KGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIA--NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
+||+++||+|++|++.| |++.+.+++++.+++|+...++ .++|++ +|++||+++|+++++++++|++.
T Consensus 389 ~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~ 458 (476)
T 1fxz_A 389 EGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNN 458 (476)
T ss_dssp TTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhh
Confidence 99999999999999999 8888999988878899999998 788986 99999999999999999999863
No 11
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.95 E-value=1.9e-28 Score=226.16 Aligned_cols=146 Identities=22% Similarity=0.354 Sum_probs=134.4
Q ss_pred CCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEc
Q 044045 63 VAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLK 142 (215)
Q Consensus 63 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~ 142 (215)
.++++.+..|++++.+++.+||+|++++++++++++.||++.+||||++++|++||++|+++++++++++ ++++..+|+
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g-~~~~~~~l~ 417 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG-NAVFDGELR 417 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCC-CEEEeEEEc
Confidence 5566668899999999999999999999999999999999999999999999999999999999998754 566678899
Q ss_pred CCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 143 KGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
+||+++||+|++|++.| +++++.+++++++++|+...+ .++|++ +|++||+++|+++++++++|+++
T Consensus 418 ~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~~ 484 (493)
T 2d5f_A 418 RGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKYQ 484 (493)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999998 558899999999999999999 788986 99999999999999999999864
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.95 E-value=3.7e-28 Score=221.41 Aligned_cols=160 Identities=20% Similarity=0.203 Sum_probs=139.9
Q ss_pred ccccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEE
Q 044045 49 KLAQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFV 128 (215)
Q Consensus 49 ~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~ 128 (215)
.......+.|+++++++.+. ..|++++.+++.+||+|+++|+++++++|.||++.+||||++++|++||++|+++++++
T Consensus 225 ~g~~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv 303 (434)
T 2ea7_A 225 KELSSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELV 303 (434)
T ss_dssp SCTTCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEE
T ss_pred CCCCCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEE
Confidence 34456788999998888774 55668999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC---------C--eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeec---hhhhcCCCCCC
Q 044045 129 TSNPE---------N--RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL-SSQNPGVITIA---NAVFGSNPSIA 193 (215)
Q Consensus 129 ~~~~~---------~--~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p 193 (215)
++++. + +++..+|++||+++||+|++|++.|. +++.+++++ ++++++.+.++ .++|+. +|
T Consensus 304 ~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p 378 (434)
T 2ea7_A 304 GLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IP 378 (434)
T ss_dssp EEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SC
T ss_pred ecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CC
Confidence 87421 1 26677999999999999999999998 468888765 56689999998 688886 99
Q ss_pred HHHHHHHcCCCHHHHHhhhcC
Q 044045 194 DDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 194 ~~vl~~af~~~~~~v~~l~~~ 214 (215)
++||+++|+++++++++|++.
T Consensus 379 ~~vla~af~v~~~~v~~l~~~ 399 (434)
T 2ea7_A 379 TEVLEVSFPASGKKVEKLIKK 399 (434)
T ss_dssp HHHHHHHSSSCHHHHHHHHTT
T ss_pred HHHHHHHHCcCHHHHHHHHhc
Confidence 999999999999999999863
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.94 E-value=2.2e-27 Score=215.17 Aligned_cols=155 Identities=22% Similarity=0.245 Sum_probs=135.2
Q ss_pred CccccccccCCCCCCCCCCceEEEeecccC-CCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCC
Q 044045 54 NHFTFSGLHVAGNTSNPLGSRVTPVTVAQI-PGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNP 132 (215)
Q Consensus 54 ~df~~~~~~~~~~~~~~~g~~~~~~~~~~~-P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~ 132 (215)
..++|+++.+++.++|..| +++.+++.+| |+|+++|+++++++|.||++.+||||++++|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~~G-~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNNFG-KLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEETTE-EEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCCCC-eEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 4789999988888765555 6899999999 9999999999999999999999999999999999999999999997642
Q ss_pred C-----------------------CeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeech---hh
Q 044045 133 E-----------------------NRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL-SSQNPGVITIAN---AV 185 (215)
Q Consensus 133 ~-----------------------~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~l 185 (215)
. .+++..+|++||+++||+|++|++.|.+ ++.+++.. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 1 0567899999999999999999999864 46666543 677999999985 67
Q ss_pred hcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 186 FGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 186 f~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
|+. ||++||+++|+++++++++|++.
T Consensus 383 ~~~---~~~evla~af~v~~~~v~~L~~~ 408 (418)
T 3s7i_A 383 IDQ---IEKQAKDLAFPGSGEQVEKLIKN 408 (418)
T ss_dssp HHH---SCHHHHHHHSSSCHHHHHHHHHT
T ss_pred hhc---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 885 99999999999999999999863
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.94 E-value=2.4e-26 Score=186.31 Aligned_cols=150 Identities=15% Similarity=0.218 Sum_probs=124.9
Q ss_pred CccccccccCCCCCCCCCCceEEEeec-----ccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEE
Q 044045 54 NHFTFSGLHVAGNTSNPLGSRVTPVTV-----AQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFV 128 (215)
Q Consensus 54 ~df~~~~~~~~~~~~~~~g~~~~~~~~-----~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~ 128 (215)
+.|+|+..+..... ...|+.++.++. ..+|+++ ++++.+++++||+..+|| |++++|++||++|+++++++
T Consensus 2 ~p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~ 77 (178)
T 1dgw_A 2 NPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 77 (178)
T ss_dssp CTTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred CCceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEE
Confidence 35778766555444 457888999887 6788877 589999999999999999 88899999999999999998
Q ss_pred ecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCC-cEEEEEEE-cCCCCcee---eec-----hhhhcCCCCCCHHHHH
Q 044045 129 TSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHG-NAFSISAL-SSQNPGVI---TIA-----NAVFGSNPSIADDLLA 198 (215)
Q Consensus 129 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~-~a~~l~~~-~s~~pg~~---~~~-----~~lf~~~p~~p~~vl~ 198 (215)
+++ + ..++.|++||+++||+|.+|+++|.|++ ++++++++ ++++||.+ .++ .++|+. +|++||+
T Consensus 78 ~~~--~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla 151 (178)
T 1dgw_A 78 NPD--G-RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLE 151 (178)
T ss_dssp ETT--E-EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHH
T ss_pred eCC--C-cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHH
Confidence 764 2 3489999999999999999999999986 78888764 66788743 332 567875 9999999
Q ss_pred HHcCCCHHHHHhhhc
Q 044045 199 KAFQLDKSVVGQLQT 213 (215)
Q Consensus 199 ~af~~~~~~v~~l~~ 213 (215)
++|+++++++++|+.
T Consensus 152 ~af~v~~~~~~~l~~ 166 (178)
T 1dgw_A 152 ASYDSPYDEIEQTLL 166 (178)
T ss_dssp HHHTSCHHHHHHHTT
T ss_pred HHHCcCHHHHHHHhc
Confidence 999999999999984
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.92 E-value=5.4e-25 Score=198.34 Aligned_cols=144 Identities=24% Similarity=0.203 Sum_probs=120.7
Q ss_pred cccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEec------C
Q 044045 58 FSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTS------N 131 (215)
Q Consensus 58 ~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~------~ 131 (215)
+.+..+.+.+.| .+++++.+++.+ +++++++++|.||++.+||||++++|++||++|+++++++++ +
T Consensus 213 ~~l~~~~p~~~n-~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~ 285 (397)
T 2phl_A 213 KSLSKQDNTIGN-EFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETL 285 (397)
T ss_dssp -------CEEEE-TTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCS
T ss_pred ccccccCCcccC-CCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCC
Confidence 333444444444 455689999987 799999999999999999999999999999999999999987 4
Q ss_pred CCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeec---hhhhcCCCCCC-----HHHHHHHcC
Q 044045 132 PENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL-SSQNPGVITIA---NAVFGSNPSIA-----DDLLAKAFQ 202 (215)
Q Consensus 132 ~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p-----~~vl~~af~ 202 (215)
+ +++++.+|++||+++||+|++|++.|.+ ++.+++.. ++++|+.+.++ .++|++ +| ++||+++|+
T Consensus 286 g-~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~---~p~~~~~~eVla~af~ 359 (397)
T 2phl_A 286 E-YESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISS---IGRALDGKDVLGLTFS 359 (397)
T ss_dssp C-EEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHH---HHTSTTHHHHHHHHSS
T ss_pred C-ceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhh---CCCccchHHHHHHHhC
Confidence 3 6889999999999999999999999986 67877654 56699999998 788886 66 999999999
Q ss_pred CCHHHHHhhhcC
Q 044045 203 LDKSVVGQLQTK 214 (215)
Q Consensus 203 ~~~~~v~~l~~~ 214 (215)
++++++++|+++
T Consensus 360 v~~~~v~~l~~~ 371 (397)
T 2phl_A 360 GSGDEVMKLINK 371 (397)
T ss_dssp SCHHHHHHHHTT
T ss_pred cCHHHHHHHHhc
Confidence 999999999863
No 16
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.91 E-value=1.3e-23 Score=185.89 Aligned_cols=158 Identities=20% Similarity=0.244 Sum_probs=139.0
Q ss_pred CccccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEE
Q 044045 48 PKLAQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGF 127 (215)
Q Consensus 48 p~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~ 127 (215)
+...+.++|+|+.+..++. .+..|+.++.+....+|+++ ++++.+++++||+..++|||+++.|++||++|++++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPL-VSLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCS-EEETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCc-ccCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 4567789999998877763 35678889999999999877 47888999999999999999977999999999999999
Q ss_pred EecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHH
Q 044045 128 VTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSV 207 (215)
Q Consensus 128 ~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~ 207 (215)
.+++ ++.+++.|++||+++||+|.+|++.|.|++++++++++...+++...++.+ ++. +|++||+++|++++++
T Consensus 271 ~~~~--g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~-~~~---~~~~vl~~~f~~~~~~ 344 (361)
T 2vqa_A 271 FASE--GKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTW-LAS---NPSSVLGNTFQISPEL 344 (361)
T ss_dssp ECST--TCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHH-HHT---SCHHHHHHHHTCCHHH
T ss_pred EcCC--CcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHH-hhh---CCHHHHHHHHCcCHHH
Confidence 7654 455689999999999999999999999999999999999999999988875 454 9999999999999999
Q ss_pred HHhhhcC
Q 044045 208 VGQLQTK 214 (215)
Q Consensus 208 v~~l~~~ 214 (215)
+++|+++
T Consensus 345 ~~~l~~~ 351 (361)
T 2vqa_A 345 TKKLPVQ 351 (361)
T ss_dssp HTTSCCS
T ss_pred HHhhhcc
Confidence 9999864
No 17
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.90 E-value=1.2e-23 Score=192.65 Aligned_cols=139 Identities=23% Similarity=0.367 Sum_probs=117.0
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCe---------------
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENR--------------- 135 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~--------------- 135 (215)
.++ .+.+.....|+|+++|+++++++|+||++.+||||+ ++|++||++|++.++++.++....
T Consensus 44 e~G-~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~ 121 (459)
T 2e9q_A 44 EAG-FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAF 121 (459)
T ss_dssp TTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------CC
T ss_pred CCc-EEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccccc
Confidence 444 445566778999999999999999999999999998 999999999999999986641000
Q ss_pred ----eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC--------Cceeeec---------------------
Q 044045 136 ----LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQN--------PGVITIA--------------------- 182 (215)
Q Consensus 136 ----~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~--------------------- 182 (215)
...+.|++||+++||+|++||++|.|++++++++++++.+ +..+.++
T Consensus 122 ~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~ 201 (459)
T 2e9q_A 122 KDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGS 201 (459)
T ss_dssp CEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC---------
T ss_pred ccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccccc
Confidence 1257999999999999999999999999999999997554 3344444
Q ss_pred -----hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 183 -----NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 183 -----~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
.++|+. |++++|+++|+++.++++||+++
T Consensus 202 ~~~~~~nif~g---f~~evLa~aF~v~~~~v~kL~~~ 235 (459)
T 2e9q_A 202 SGEKSGNIFSG---FADEFLEEAFQIDGGLVRKLKGE 235 (459)
T ss_dssp ---CCCCTTTT---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred ccccccchhhc---CCHHHHHhhcCCCHHHHHhhhhc
Confidence 378885 99999999999999999999864
No 18
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.90 E-value=2.5e-23 Score=190.11 Aligned_cols=155 Identities=16% Similarity=0.217 Sum_probs=125.3
Q ss_pred cCCccccccccCCCCCCCCCCceEEEeec--ccCCCCCcCc-eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEE
Q 044045 52 QANHFTFSGLHVAGNTSNPLGSRVTPVTV--AQIPGLNTLG-ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFV 128 (215)
Q Consensus 52 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~ 128 (215)
..+.|+|......... ...++.+..++. .+.|++++.| +++++++++||+..+|| |++++|++||++|+++++++
T Consensus 45 ~~~p~vf~~~~~~~~i-~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v 122 (445)
T 2cav_A 45 QNNPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 122 (445)
T ss_dssp -CCTTEECGGGEEEEE-EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred CCCCeEEchhhcCceE-EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEE
Confidence 3456777754432222 234667777654 5667888887 99999999999999999 66799999999999999998
Q ss_pred ecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCce---eeec-----hhhhcCCCCCCHHHHH
Q 044045 129 TSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG-HGNAFSISALS-SQNPGV---ITIA-----NAVFGSNPSIADDLLA 198 (215)
Q Consensus 129 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~-----~~lf~~~p~~p~~vl~ 198 (215)
+++ ++ +++.|++||+++||+|++||++|.| +++++++++++ +++|+. +.++ .++|+. +|++||+
T Consensus 123 ~~~--~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa 196 (445)
T 2cav_A 123 NPD--GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLE 196 (445)
T ss_dssp ETT--EE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHH
T ss_pred eCC--CC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHH
Confidence 764 44 6999999999999999999999998 79999999886 666763 3344 367885 9999999
Q ss_pred HHcCCCHHHHHhhhcC
Q 044045 199 KAFQLDKSVVGQLQTK 214 (215)
Q Consensus 199 ~af~~~~~~v~~l~~~ 214 (215)
++|+++++++++|+++
T Consensus 197 ~af~v~~~~v~~l~~~ 212 (445)
T 2cav_A 197 ASYDSPYDEIEQTLLQ 212 (445)
T ss_dssp HHHTSCHHHHHHHTTS
T ss_pred HHhCCCHHHHHhhhcc
Confidence 9999999999999853
No 19
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.90 E-value=2.6e-23 Score=189.49 Aligned_cols=152 Identities=17% Similarity=0.253 Sum_probs=124.6
Q ss_pred CCcccccccc-CCCCCCCCCCceEEEee--cccCCCCCcCc-eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEE
Q 044045 53 ANHFTFSGLH-VAGNTSNPLGSRVTPVT--VAQIPGLNTLG-ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFV 128 (215)
Q Consensus 53 ~~df~~~~~~-~~~~~~~~~g~~~~~~~--~~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~ 128 (215)
.+.|+|+... .+... ...|+.++.++ ..+.|.+++.+ +++++++++||++.+|| |++++|++||++|+++++++
T Consensus 20 ~~p~~f~~~~~~~~~~-~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLY-RNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp GCTTEECTTTSEEEEE-EETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCCeEEeccccccceE-EcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 3557776443 22222 34667788874 36678899888 99999999999999999 77799999999999999998
Q ss_pred ecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC-CCcEEEEEEE-cCCCCce---eeech-----hhhcCCCCCCHHHHH
Q 044045 129 TSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG-HGNAFSISAL-SSQNPGV---ITIAN-----AVFGSNPSIADDLLA 198 (215)
Q Consensus 129 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~-~s~~pg~---~~~~~-----~lf~~~p~~p~~vl~ 198 (215)
++ ++.+++.|++||+++||+|++||++|.| ++++++++++ .+++|+. +.++. ++|+. +|++||+
T Consensus 98 ~~---~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa 171 (434)
T 2ea7_A 98 NP---DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILE 171 (434)
T ss_dssp CS---SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHH
T ss_pred eC---CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHH
Confidence 75 4456999999999999999999999998 7899999887 4667653 34543 36775 9999999
Q ss_pred HHcCCCHHHHHhhh
Q 044045 199 KAFQLDKSVVGQLQ 212 (215)
Q Consensus 199 ~af~~~~~~v~~l~ 212 (215)
++|+++++++++|+
T Consensus 172 ~af~v~~~~v~~l~ 185 (434)
T 2ea7_A 172 ASFDSDFKEINRVL 185 (434)
T ss_dssp HHHTSCHHHHHHHH
T ss_pred HHhCCCHHHHHhhh
Confidence 99999999999998
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.89 E-value=4.3e-23 Score=187.19 Aligned_cols=152 Identities=19% Similarity=0.278 Sum_probs=122.4
Q ss_pred CCccccc-cccCCCCCCCCCCceEEEee--cccCCCCCcCc-eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEE
Q 044045 53 ANHFTFS-GLHVAGNTSNPLGSRVTPVT--VAQIPGLNTLG-ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFV 128 (215)
Q Consensus 53 ~~df~~~-~~~~~~~~~~~~g~~~~~~~--~~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~ 128 (215)
.+.|+|. ..+..... ...|+.++.++ ....+.+++.+ +++++++++||++.+|| |++++|++||++|+++++++
T Consensus 8 ~~p~~f~~~~~~~~~~-~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v 85 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLF-ENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLV 85 (416)
T ss_dssp SCTTEECGGGSEEEEE-ECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEE
T ss_pred CCCeEecccccccceE-EcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEE
Confidence 3556666 32222222 35667788763 34557888887 99999999999999999 77799999999999999998
Q ss_pred ecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC-CCcEEEEEEEc-CCCCce---eeech-----hhhcCCCCCCHHHHH
Q 044045 129 TSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG-HGNAFSISALS-SQNPGV---ITIAN-----AVFGSNPSIADDLLA 198 (215)
Q Consensus 129 ~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~~-----~lf~~~p~~p~~vl~ 198 (215)
++ ++.+++.+++||+++||+|++|+++|.| ++++++++++. +++|+. +.++. ++|+. +|++||+
T Consensus 86 ~~---~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa 159 (416)
T 1uij_A 86 NN---DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILE 159 (416)
T ss_dssp CS---SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHH
T ss_pred EC---CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHH
Confidence 76 3446899999999999999999999995 99999999885 566653 24443 46775 9999999
Q ss_pred HHcCCCHHHHHhhh
Q 044045 199 KAFQLDKSVVGQLQ 212 (215)
Q Consensus 199 ~af~~~~~~v~~l~ 212 (215)
++|+++++++++|+
T Consensus 160 ~af~v~~~~v~~l~ 173 (416)
T 1uij_A 160 TSFHSEFEEINRVL 173 (416)
T ss_dssp HHHTSCHHHHHHHH
T ss_pred HHhCcCHHHHHhhh
Confidence 99999999999998
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.89 E-value=6e-23 Score=185.01 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=125.0
Q ss_pred CCcccccccc-CCCCCCCCCCceEEEe--ecccCCCCCcCc-eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEE
Q 044045 53 ANHFTFSGLH-VAGNTSNPLGSRVTPV--TVAQIPGLNTLG-ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFV 128 (215)
Q Consensus 53 ~~df~~~~~~-~~~~~~~~~g~~~~~~--~~~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~ 128 (215)
.+.|+|...+ ....+ ...|+.++.+ ...+.|+|++++ +++++++++||++.+||||. ++|++||++|+++++++
T Consensus 11 ~~p~~f~~~~~~~~~~-~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~~-a~ei~yVl~G~~~v~~v 88 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLF-KNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQAD-AELLLVVRSGSAILVLV 88 (397)
T ss_dssp CCTTEECGGGTEEEEE-EETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEES-EEEEEEEEESEEEEEEE
T ss_pred CCCcEeccchhccceE-EcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEecC-CCeEEEEEeeeEEEEEE
Confidence 4567776443 22222 4567778887 556779999998 99999999999999999995 99999999999999999
Q ss_pred ecCCCCeeEEEEEcCCCE------EEEcCCCeEEEEeCC-CCcEEEEEEEcCC-CC--ceeeec-----hhhhcCCCCCC
Q 044045 129 TSNPENRLITKVLKKGDV------FVFPIGLAHFQRNVG-HGNAFSISALSSQ-NP--GVITIA-----NAVFGSNPSIA 193 (215)
Q Consensus 129 ~~~~~~~~~~~~L~~GDv------~~~P~G~~H~~~N~g-~~~a~~l~~~~s~-~p--g~~~~~-----~~lf~~~p~~p 193 (215)
+++ ++ +++.|++||+ ++||+|++||+.|.| ++++++++++++. +| ..+.++ .++|+. +|
T Consensus 89 ~~~--~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~ 162 (397)
T 2phl_A 89 KPD--DR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FS 162 (397)
T ss_dssp ETT--TE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SC
T ss_pred eCC--Cc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CC
Confidence 875 45 5899999999 999999999999999 7899999988643 33 334443 246775 99
Q ss_pred HHHHHHHcCCCHHHHHhhh
Q 044045 194 DDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 194 ~~vl~~af~~~~~~v~~l~ 212 (215)
++||+++|+++.+++++|+
T Consensus 163 ~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 163 KHILEASFNSKFEEINRVL 181 (397)
T ss_dssp HHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHhhh
Confidence 9999999999999999998
No 22
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.89 E-value=9.4e-23 Score=187.55 Aligned_cols=139 Identities=16% Similarity=0.245 Sum_probs=116.4
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC----------------
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN---------------- 134 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~---------------- 134 (215)
.++. +.+.....|+|+++|+++++++|+|||+.+||||+ +.|++||++|++.++++.++...
T Consensus 29 e~G~-~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (476)
T 1fxz_A 29 EGGL-IETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSR 106 (476)
T ss_dssp TTEE-EEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC---------------
T ss_pred CCce-EEeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccccc
Confidence 4443 44466677999999999999999999999999999 89999999999999999764100
Q ss_pred ----eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC--------ceeeec--------------------
Q 044045 135 ----RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNP--------GVITIA-------------------- 182 (215)
Q Consensus 135 ----~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~-------------------- 182 (215)
....+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 107 ~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 186 (476)
T 1fxz_A 107 PQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQ 186 (476)
T ss_dssp ---CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC--------
T ss_pred cccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccccc
Confidence 012689999999999999999999999999999999974442 344443
Q ss_pred ------------hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 183 ------------NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 183 ------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
.++|+. |++++|+++|+++.++++||+++
T Consensus 187 ~~~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~ 227 (476)
T 1fxz_A 187 KGKHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGE 227 (476)
T ss_dssp -----------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC
T ss_pred ccccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhcc
Confidence 368875 99999999999999999999864
No 23
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.88 E-value=2.3e-22 Score=185.21 Aligned_cols=136 Identities=18% Similarity=0.307 Sum_probs=116.2
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeE-------------
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLI------------- 137 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~------------- 137 (215)
.|+ ++.+...++|+|+++|++++|++|.|||+.+||+| +++|++||++|++.++++.++. ++.+
T Consensus 27 e~G-~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~-~e~f~~~~~~~~~~~~~ 103 (496)
T 3ksc_A 27 EGG-LIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGC-PETFEEPQESEQGEGRR 103 (496)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTC-CCC--------------
T ss_pred CCc-EEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCC-Cccchhhhhcccccccc
Confidence 344 66777799999999999999999999999999999 6999999999999999997631 1222
Q ss_pred -------EEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC--------ceeeec--------------------
Q 044045 138 -------TKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNP--------GVITIA-------------------- 182 (215)
Q Consensus 138 -------~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~-------------------- 182 (215)
.+.|++||+|+||+|++||+.|.|+++++++++++..++ ..+.++
T Consensus 104 ~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~ 183 (496)
T 3ksc_A 104 YRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQ 183 (496)
T ss_dssp -CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC--------
T ss_pred cccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccc
Confidence 459999999999999999999999999999999865443 233333
Q ss_pred ----hhhhcCCCCCCHHHHHHHcCCCHHHHHhhh
Q 044045 183 ----NAVFGSNPSIADDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 183 ----~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 212 (215)
.++|+. |+.++|+.||+++.++++||+
T Consensus 184 ~~~~~ni~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 184 ENEGNNIFSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ---CCSGGGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred cccCCCchhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 478885 999999999999999999998
No 24
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.88 E-value=1.9e-22 Score=184.47 Aligned_cols=139 Identities=21% Similarity=0.388 Sum_probs=116.9
Q ss_pred CCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCee-------------
Q 044045 70 PLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRL------------- 136 (215)
Q Consensus 70 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~------------- 136 (215)
..|+.+...+ .+-+.|+++|++++|++|+|||+.+|||| ++.|++||++|++.++++.++. ++.
T Consensus 30 se~G~~e~~d-~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~~~~~~~~ 106 (465)
T 3qac_A 30 AERGLTEVWD-SNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGC-PETYESGSQQFQGGED 106 (465)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTC-CCCC------------
T ss_pred CCCcEEEEEC-CCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCC-Cceeecchhccccccc
Confidence 4566666665 45578999999999999999999999999 6999999999999999996631 121
Q ss_pred -----------------------EEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC---------Cceeeec--
Q 044045 137 -----------------------ITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQN---------PGVITIA-- 182 (215)
Q Consensus 137 -----------------------~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~---------pg~~~~~-- 182 (215)
..+.+++||+++||+|+.||++|.|++++++++++++.| +..+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 107 ERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp ------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred cccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCC
Confidence 156999999999999999999999999999999997543 4445665
Q ss_pred ----------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 183 ----------------------NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 183 ----------------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
.++|+. |++++|+++|+++.++++||++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred Cccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhhc
Confidence 368885 99999999999999999999753
No 25
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.88 E-value=3.4e-22 Score=181.18 Aligned_cols=135 Identities=19% Similarity=0.306 Sum_probs=110.4
Q ss_pred CCCCceEEEee-----cccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcC
Q 044045 69 NPLGSRVTPVT-----VAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKK 143 (215)
Q Consensus 69 ~~~g~~~~~~~-----~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~ 143 (215)
...++.++.+. ...+|+|++ +.+++++++|+++.+|| |++++|++||++|+++++++++ ++.+.+.|++
T Consensus 19 ~se~G~i~~l~~f~~~s~~l~~l~~--~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~---~~~~~~~l~~ 92 (418)
T 3s7i_A 19 GNQNGRIRVLQRFDQRSRQFQNLQN--HRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG---NNRKSFNLDE 92 (418)
T ss_dssp ECSSEEEEEECCHHHHCGGGGGGTT--CEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS---SCEEEEEEET
T ss_pred EcCCcEEEEecccCCcchhcccccc--eEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec---CCEEEEEecC
Confidence 34556677774 357777775 56668889999999999 8889999999999999999987 4567999999
Q ss_pred CCEEEEcCCCeEEEEeCCCC-cEEEEE-EEcCCCCceeee---c-----hhhhcCCCCCCHHHHHHHcCCCHHHHHhhh
Q 044045 144 GDVFVFPIGLAHFQRNVGHG-NAFSIS-ALSSQNPGVITI---A-----NAVFGSNPSIADDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 144 GDv~~~P~G~~H~~~N~g~~-~a~~l~-~~~s~~pg~~~~---~-----~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 212 (215)
||+++||+|++||+.|.|+. .+++++ ..++++||.+.. + .++|+. +|++||+++|+++++++++|+
T Consensus 93 GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 93 GHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp TEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHT
T ss_pred CCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCcCHHHHHhhh
Confidence 99999999999999998765 455554 356777875332 1 357874 999999999999999999997
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.87 E-value=6.7e-22 Score=182.53 Aligned_cols=138 Identities=23% Similarity=0.434 Sum_probs=115.7
Q ss_pred CceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCC----------------C-
Q 044045 72 GSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPE----------------N- 134 (215)
Q Consensus 72 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~----------------~- 134 (215)
|+ ++++.....|+|+++|+++++++|.||++.+||||+ +.|++||++|++.++++.++.. .
T Consensus 27 ~G-~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~ 104 (493)
T 2d5f_A 27 GG-LIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQ 104 (493)
T ss_dssp SE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-----------
T ss_pred Cc-EEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 54 567777888999999999999999999999999998 7899999999999999965310 0
Q ss_pred ------eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCC---C-----Cceeeec------------------
Q 044045 135 ------RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQ---N-----PGVITIA------------------ 182 (215)
Q Consensus 135 ------~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~---~-----pg~~~~~------------------ 182 (215)
....+.|++||+++||+|++||++|.|+++++++++++.. | +..+.++
T Consensus 105 ~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (493)
T 2d5f_A 105 QQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQK 184 (493)
T ss_dssp --CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC------
T ss_pred cccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccc
Confidence 0125699999999999999999999999999999998633 2 2334444
Q ss_pred -----------------hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 183 -----------------NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 183 -----------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
.++|+. |++++|+++|+++.+++++|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~ 230 (493)
T 2d5f_A 185 SHGGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSP 230 (493)
T ss_dssp ---------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCT
T ss_pred ccccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhc
Confidence 368874 99999999999999999999864
No 27
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.85 E-value=2.4e-21 Score=177.24 Aligned_cols=140 Identities=22% Similarity=0.302 Sum_probs=115.0
Q ss_pred CCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC---------------
Q 044045 70 PLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN--------------- 134 (215)
Q Consensus 70 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~--------------- 134 (215)
..|+.+...+.. -|+|+++|++++++++.|||+.+||+|+ ++|++||++|++.++++.++-..
T Consensus 23 se~G~~e~w~~~-~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~ 100 (466)
T 3kgl_A 23 AEAGRIEVWDHH-APQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSP 100 (466)
T ss_dssp ETTEEEEECCTT-SHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---
T ss_pred CCCcEEEEECCC-ChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccc
Confidence 445556565555 4999999999999999999999999998 99999999999999999762000
Q ss_pred ------------------------------------------eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 044045 135 ------------------------------------------RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALS 172 (215)
Q Consensus 135 ------------------------------------------~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~ 172 (215)
....+.|++||+++||+|++||++|.|+++++++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 101 FGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp --------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 00125899999999999999999999999999999885
Q ss_pred CCC--------Cceeeec------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 173 SQN--------PGVITIA------------------NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 173 s~~--------pg~~~~~------------------~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
..+ +..+.++ .++|+. |+.++|+++|+++.++++||++.
T Consensus 181 ~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 181 LASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp SSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCHHHHHHHTCT
T ss_pred CCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCHHHHHHHhcc
Confidence 443 2445554 267874 99999999999999999999754
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.85 E-value=3.1e-21 Score=178.25 Aligned_cols=139 Identities=19% Similarity=0.315 Sum_probs=115.5
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCC----------Ce-----
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPE----------NR----- 135 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~----------~~----- 135 (215)
.|+ ++++...+.|+|+++|+++++++|+||++.+||||+ +.|++||++|++.++++.++.. ++
T Consensus 29 e~G-~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (510)
T 3c3v_A 29 EGG-YIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQR 106 (510)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC--------
T ss_pred CCc-eEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccc
Confidence 344 566677888999999999999999999999999998 8999999999999999976310 00
Q ss_pred ------------------eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCC--------ceeeec-------
Q 044045 136 ------------------LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNP--------GVITIA------- 182 (215)
Q Consensus 136 ------------------~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~------- 182 (215)
...+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 107 ~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~ 186 (510)
T 3c3v_A 107 PPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEF 186 (510)
T ss_dssp ------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTT
T ss_pred ccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccccc
Confidence 01378999999999999999999999999999999965542 233332
Q ss_pred -----------------------------------------------------hhhhcCCCCCCHHHHHHHcCCC-HHHH
Q 044045 183 -----------------------------------------------------NAVFGSNPSIADDLLAKAFQLD-KSVV 208 (215)
Q Consensus 183 -----------------------------------------------------~~lf~~~p~~p~~vl~~af~~~-~~~v 208 (215)
.++|+. ++.++|+++|+++ ++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~~~ 263 (510)
T 3c3v_A 187 LRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQIV 263 (510)
T ss_dssp GGGCC------------------------------------------------CCTGGG---SCHHHHHHHHTCCCHHHH
T ss_pred chhhhccccccccccccccccccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHHHH
Confidence 257874 9999999999999 9999
Q ss_pred HhhhcC
Q 044045 209 GQLQTK 214 (215)
Q Consensus 209 ~~l~~~ 214 (215)
++|++.
T Consensus 264 ~~l~~~ 269 (510)
T 3c3v_A 264 QNLRGE 269 (510)
T ss_dssp HHHTTT
T ss_pred HHhhcc
Confidence 999753
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=4.1e-20 Score=163.50 Aligned_cols=149 Identities=17% Similarity=0.221 Sum_probs=125.2
Q ss_pred ccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC
Q 044045 55 HFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN 134 (215)
Q Consensus 55 df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~ 134 (215)
.|.|+....++.. ..|+.++.++..++|.+. ++++.+++++||+..++|||+++.|++||++|++++++++++ +
T Consensus 20 ~~~~~~~~~~~~~--~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~--g 93 (361)
T 2vqa_A 20 AFTYAFSKTPLVL--YDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE--G 93 (361)
T ss_dssp CSEECGGGSCCEE--ETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT--S
T ss_pred ceEEEcccCCcee--cCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC--C
Confidence 3777765555432 367889999999999877 468999999999999999999899999999999999998764 4
Q ss_pred eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCc---eeeechhhhcCCCCCCHHHHHHHcCCCHHHHHhh
Q 044045 135 RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPG---VITIANAVFGSNPSIADDLLAKAFQLDKSVVGQL 211 (215)
Q Consensus 135 ~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg---~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l 211 (215)
+...+.|++||+++||+|.+|+++|.++++++++.+++..++. .+... +.|+. +|.++|+++|+++.+.+++|
T Consensus 94 ~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~~---~p~~vLa~~~~v~~~~~~~l 169 (361)
T 2vqa_A 94 KVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLSH---TPIAWVEENLGWTAAQVAQL 169 (361)
T ss_dssp CEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHHT---SCHHHHHHHHTCCHHHHTTS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHHh---CCHHHHHHHhCcCHHHHHhc
Confidence 3347999999999999999999999999999999998777654 35444 44664 99999999999999999988
Q ss_pred hc
Q 044045 212 QT 213 (215)
Q Consensus 212 ~~ 213 (215)
++
T Consensus 170 ~~ 171 (361)
T 2vqa_A 170 PK 171 (361)
T ss_dssp CS
T ss_pred cc
Confidence 65
No 30
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.83 E-value=2.2e-20 Score=172.24 Aligned_cols=140 Identities=23% Similarity=0.358 Sum_probs=115.6
Q ss_pred CCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecC-CC---------------
Q 044045 70 PLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSN-PE--------------- 133 (215)
Q Consensus 70 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~-~~--------------- 133 (215)
..|+ ++.+...++|+|+++|++++|++|.|+|+++||+|+ +.|++||++|++.++++.++ ++
T Consensus 28 se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 3455 566667889999999999999999999999999998 99999999999999999763 00
Q ss_pred ---------------------------------------------------------------CeeEEEEEcCCCEEEEc
Q 044045 134 ---------------------------------------------------------------NRLITKVLKKGDVFVFP 150 (215)
Q Consensus 134 ---------------------------------------------------------------~~~~~~~L~~GDv~~~P 150 (215)
.....+.+++||++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 00114678999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEcCCC--------Cceeeec----------------------------------------
Q 044045 151 IGLAHFQRNVGHGNAFSISALSSQN--------PGVITIA---------------------------------------- 182 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~---------------------------------------- 182 (215)
+|+.||++|.|+++++++++++..| |..+.++
T Consensus 186 aG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (531)
T 3fz3_A 186 AGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQ 265 (531)
T ss_dssp TTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------------
T ss_pred CCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999884332 2223332
Q ss_pred ---hhhhcCCCCCCHHHHHHHcCCCHHHHHhhhcC
Q 044045 183 ---NAVFGSNPSIADDLLAKAFQLDKSVVGQLQTK 214 (215)
Q Consensus 183 ---~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~~ 214 (215)
.++|+. |+.++|+.||+++.++++||++.
T Consensus 266 ~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 266 GNGNNVFSG---FNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp -CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHTS
T ss_pred ccCCCeeec---CCHHHHHHHHCCCHHHHHHHhcc
Confidence 368885 99999999999999999999853
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.82 E-value=3.3e-19 Score=159.15 Aligned_cols=154 Identities=16% Similarity=0.228 Sum_probs=128.2
Q ss_pred ccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEec
Q 044045 51 AQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTS 130 (215)
Q Consensus 51 ~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~ 130 (215)
..+..|+|+....++ . ...|+.++.+....++..+ ++++.+++++||+..++|||+.+.|++||++|++++.+.+.
T Consensus 221 ~~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~ 296 (385)
T 1j58_A 221 EVPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFAS 296 (385)
T ss_dssp CCSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEE
T ss_pred CCCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcC
Confidence 345678888766655 3 2346677888888887543 58899999999999999999966999999999999999855
Q ss_pred CCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHh
Q 044045 131 NPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQ 210 (215)
Q Consensus 131 ~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~ 210 (215)
+ ++-.++.|++||+++||+|.+|++.|.|++++++++++....+....+.+++ +. +++++++++|+++++++++
T Consensus 297 ~--g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~~---~~~~v~~~~f~~~~~~~~~ 370 (385)
T 1j58_A 297 D--GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-AM---LPETFVQAHLDLGKDFTDV 370 (385)
T ss_dssp T--TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHTT
T ss_pred C--CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-Hh---CCHHHHHHHhCCCHHHHHh
Confidence 4 3234899999999999999999999999999999999988777777776665 43 8999999999999999999
Q ss_pred hhcC
Q 044045 211 LQTK 214 (215)
Q Consensus 211 l~~~ 214 (215)
|++.
T Consensus 371 l~~~ 374 (385)
T 1j58_A 371 LSKE 374 (385)
T ss_dssp CCSS
T ss_pred hhcc
Confidence 9764
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.79 E-value=1e-18 Score=155.94 Aligned_cols=147 Identities=20% Similarity=0.248 Sum_probs=121.9
Q ss_pred cccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCe
Q 044045 56 FTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENR 135 (215)
Q Consensus 56 f~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~ 135 (215)
+.|+....++.. ..|+.++.++...+|.++ ++++.++++.||+..++|||+ +.|++||++|++++++++++ ++
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~--g~ 120 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK--GR 120 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT--SC
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC--Cc
Confidence 777765555533 467889999999999987 689999999999999999999 89999999999999998764 55
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceee--echhhhcCCCCCCHHHHHHHcCCCHHHHHhhhc
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVIT--IANAVFGSNPSIADDLLAKAFQLDKSVVGQLQT 213 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~--~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 213 (215)
.+.+.|++||+++||+|..|++.|.+ ++++++.+++...+.... ...++|+. +|.++|+++|+++.++++++++
T Consensus 121 ~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 121 SFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 44679999999999999999999987 468888888877664321 22455664 9999999999999999888754
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.76 E-value=2.9e-19 Score=126.58 Aligned_cols=74 Identities=26% Similarity=0.259 Sum_probs=69.6
Q ss_pred ccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecC
Q 044045 57 TFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSN 131 (215)
Q Consensus 57 ~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~ 131 (215)
.|+++++.|+++|..|. ++.+++.++|+|+++|++++++++.||++.+||||++|+|++||++|++++++++++
T Consensus 3 pfnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 3 PFNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp CEETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred ccccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 47889999999888887 599999999999999999999999999999999999999999999999999999875
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.59 E-value=9.1e-15 Score=110.10 Aligned_cols=84 Identities=25% Similarity=0.295 Sum_probs=73.0
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
++.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ ++.|++||++++|+|.+|++.|.+++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~ 111 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN----GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST----TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC----Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEE
Confidence 5688899999999999999997799999999999998721 34 79999999999999999999999999999999
Q ss_pred EEcCCCCcee
Q 044045 170 ALSSQNPGVI 179 (215)
Q Consensus 170 ~~~s~~pg~~ 179 (215)
++....+++.
T Consensus 112 v~~p~~~~~~ 121 (125)
T 3h8u_A 112 VVAPGNAGFA 121 (125)
T ss_dssp EEESTTCCCC
T ss_pred EECCCcccch
Confidence 8876666543
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.57 E-value=8e-15 Score=123.84 Aligned_cols=117 Identities=14% Similarity=0.066 Sum_probs=85.8
Q ss_pred ccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEE---
Q 044045 51 AQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGF--- 127 (215)
Q Consensus 51 ~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~--- 127 (215)
.+.+||.+..+..+....++.|.....++. ...+.++++.+++++||+..++|+|+++.|++||++|++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~ 82 (239)
T 2xlg_A 7 HTFDDIPMPKLADPLLIYTPANEIFDIASC----SAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTK 82 (239)
T ss_dssp CBCSCCCCCCCSSCEEEECTTCCEEEEEEE----EETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEE
T ss_pred cchhhCCCccccccceeecCCceEEEEecc----CCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEec
Confidence 455666666554333333343332222221 2233468899999999999999999999999999999999988
Q ss_pred -----Eec-----CCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE-EEEE
Q 044045 128 -----VTS-----NPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS-ISAL 171 (215)
Q Consensus 128 -----~~~-----~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~-l~~~ 171 (215)
.+. +++++.+.+.+++||++++|+|.+|.++|.+++++++ +.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 83 QYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp ECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred ccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 332 1224556899999999999999999999999999998 6666
No 36
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.55 E-value=4.3e-14 Score=111.63 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=84.7
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCC--CCeeEEEEEcCCCEEEEcCCCeEEEEeCC-CCcEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNP--ENRLITKVLKKGDVFVFPIGLAHFQRNVG-HGNAF 166 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~--~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~ 166 (215)
++.+.++.++||+..++|+|+ ..|++||++|++++.+.+.++ .++...+.|++||++++|+|.+|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 578899999999999999998 789999999999999875210 01223899999999999999999999999 89999
Q ss_pred EEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHh
Q 044045 167 SISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQ 210 (215)
Q Consensus 167 ~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~ 210 (215)
+++++.........+.+++ . ++....+...+.++++.++.
T Consensus 119 ~l~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYDDWS-M---PHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEESSTT-S---CGGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCcccccccccc-c---CCcCccceeccccccccccc
Confidence 9988765444433444332 1 12333333344555555554
No 37
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.55 E-value=4.9e-14 Score=111.08 Aligned_cols=86 Identities=20% Similarity=0.216 Sum_probs=74.6
Q ss_pred ceEEEEEEEcCCc-cCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCC-CeEEEEeCCCCcEEE
Q 044045 90 GASLARIDYAPWG-VIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIG-LAHFQRNVGHGNAFS 167 (215)
Q Consensus 90 gis~~~~~l~pgg-~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G-~~H~~~N~g~~~a~~ 167 (215)
++++.+++++||+ ..++|||+...|++||++|++++.+. ++ ++.|++||+++||+| ..|++.|.+++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~ 117 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME-----ND--QYPIAPGDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTSCCEEEECCSSSCEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC-----CE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEE
Confidence 6789999999999 58999996689999999999999975 44 799999999999998 999999999999999
Q ss_pred EEEEcCCCCceeeec
Q 044045 168 ISALSSQNPGVITIA 182 (215)
Q Consensus 168 l~~~~s~~pg~~~~~ 182 (215)
+++.....+....++
T Consensus 118 l~v~~p~~~~~~~~p 132 (162)
T 3l2h_A 118 LVIGQRLDQDVVDYP 132 (162)
T ss_dssp EEEEECCSEEEEEET
T ss_pred EEEECCCCCCeEecC
Confidence 988776555444444
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.53 E-value=3.8e-14 Score=102.72 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=67.7
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+.+++++||+..++|.|++..|++||++|++++.+.+ +. ..+.|++||++++|+|.+|.+.|.|+++++++
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l 90 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE----GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFV 90 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT----EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC----CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEE
Confidence 36789999999999999999996667999999999998852 21 27899999999999999999999999999988
Q ss_pred EE
Q 044045 169 SA 170 (215)
Q Consensus 169 ~~ 170 (215)
.+
T Consensus 91 ~v 92 (97)
T 2fqp_A 91 EI 92 (97)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 39
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.51 E-value=1.4e-13 Score=99.09 Aligned_cols=78 Identities=19% Similarity=0.189 Sum_probs=69.9
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
+.++.+.++.++||...++|+|+...|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+++++++
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 97 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG-----EE--EALLAPGMAAFAPAGAPHGVRNESASPALL 97 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTSCEEEECCSSSCEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 34688899999999999999999668999999999999884 34 799999999999999999999999999999
Q ss_pred EEEEc
Q 044045 168 ISALS 172 (215)
Q Consensus 168 l~~~~ 172 (215)
+.++.
T Consensus 98 ~~v~~ 102 (105)
T 1v70_A 98 LVVTA 102 (105)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 88765
No 40
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.50 E-value=9.9e-14 Score=111.65 Aligned_cols=81 Identities=17% Similarity=0.237 Sum_probs=73.2
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.|..+.+++++||+..++|.|. ..|++||++|++++.+.+ ++ ++.|++||++ ||+|..|.++|.|+++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~----ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l 148 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD----GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIA 148 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG----GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC----Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEE
Confidence 4889999999999999999998 789999999999998852 23 7999999999 99999999999999999999
Q ss_pred EEEcCCCCc
Q 044045 169 SALSSQNPG 177 (215)
Q Consensus 169 ~~~~s~~pg 177 (215)
+++....|-
T Consensus 149 ~V~~P~~p~ 157 (172)
T 3es1_A 149 FILIEAPAY 157 (172)
T ss_dssp EEEEECCCC
T ss_pred EEEcCCCce
Confidence 999877763
No 41
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.49 E-value=2.1e-13 Score=108.38 Aligned_cols=87 Identities=18% Similarity=0.129 Sum_probs=74.9
Q ss_pred CceEEEEEEEcCCccC-CCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCC--CeEEEEeCCCCcE
Q 044045 89 LGASLARIDYAPWGVI-PPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIG--LAHFQRNVGHGNA 165 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~-~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G--~~H~~~N~g~~~a 165 (215)
..+.+.+++++||+.. ++|+|+...|++||++|++++.+. ++ ++.|++||+++||+| ..|.+.|.+++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~-----~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~ 113 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD-----QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPA 113 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCCCBEEECCSSSCE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC-----CE--EEEeCCCCEEEECCCCCcceEEEECCCCCE
Confidence 4688999999999965 799999668999999999999985 34 899999999999999 9999999999999
Q ss_pred EEEEEEcCCCCceeeec
Q 044045 166 FSISALSSQNPGVITIA 182 (215)
Q Consensus 166 ~~l~~~~s~~pg~~~~~ 182 (215)
+++++..........+.
T Consensus 114 ~~l~v~~p~~~d~~~yp 130 (163)
T 3i7d_A 114 TFLVVGTRTPTETAYYS 130 (163)
T ss_dssp EEEEEEECCSCEEEEET
T ss_pred EEEEEECCCCCCcccCC
Confidence 99998876655444443
No 42
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.49 E-value=9.2e-13 Score=105.14 Aligned_cols=118 Identities=14% Similarity=0.173 Sum_probs=87.6
Q ss_pred CccccCCccccccccCCCC---CCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEE
Q 044045 48 PKLAQANHFTFSGLHVAGN---TSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLD 124 (215)
Q Consensus 48 p~~~~~~df~~~~~~~~~~---~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~ 124 (215)
+.-+..+++.+.......- .....|...+.+..... +....++.+.+++++||+..++|+|+ ..|++||++|+++
T Consensus 11 ~~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~ 88 (167)
T 3ibm_A 11 SRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAE 88 (167)
T ss_dssp CEEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEE
T ss_pred CceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEE
Confidence 3455667777766443211 01134554444443332 22234788999999999999999998 8999999999999
Q ss_pred EEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC-CCcEEEEEEEcCC
Q 044045 125 VGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG-HGNAFSISALSSQ 174 (215)
Q Consensus 125 ~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g-~~~a~~l~~~~s~ 174 (215)
+.+. ++ ++.|++||+++||+|.+|.+.|.+ ++++++++++...
T Consensus 89 ~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 89 VVLD-----DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EEET-----TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEEC-----CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 9885 44 899999999999999999999999 9999999887654
No 43
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.49 E-value=4e-13 Score=104.64 Aligned_cols=85 Identities=19% Similarity=0.127 Sum_probs=71.3
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.++++.++.++||...++|+|+...|++||++|++++.+.+... ...+++.|++||+++||+|.+|.+.|.++++++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~-~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l 119 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD-NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLY 119 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT-BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc-cceeeEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 35788899999999999999997779999999999999874310 01134899999999999999999999999999988
Q ss_pred EEEcCC
Q 044045 169 SALSSQ 174 (215)
Q Consensus 169 ~~~~s~ 174 (215)
+++...
T Consensus 120 ~i~~~~ 125 (148)
T 2oa2_A 120 SIYAPP 125 (148)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 877543
No 44
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.48 E-value=2.9e-13 Score=103.74 Aligned_cols=83 Identities=23% Similarity=0.273 Sum_probs=73.1
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEE--EEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVG--FVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~--~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
..+++.+++++||+..++|+|+ ..|++||++|++++. +. ++ .+.+++||++++|+|.+|.+.|.++++++
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~ 108 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQ-----GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCR 108 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGG-----TE--EEEECTTCEEEECTTCCBEEECCTTCCEE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeEC-----CE--EEEECCCCEEEECCCCeEEeEcCCCCCEE
Confidence 4688999999999999999999 678899999999998 53 44 89999999999999999999999999999
Q ss_pred EEEEEcCCCCcee
Q 044045 167 SISALSSQNPGVI 179 (215)
Q Consensus 167 ~l~~~~s~~pg~~ 179 (215)
++.++....+...
T Consensus 109 ~l~i~~~~~~~~~ 121 (145)
T 3ht1_A 109 FLVVAPCERPPVR 121 (145)
T ss_dssp EEEEEESCCCCCE
T ss_pred EEEEECCCCCCee
Confidence 9988876665543
No 45
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.46 E-value=5.7e-13 Score=97.50 Aligned_cols=78 Identities=22% Similarity=0.204 Sum_probs=69.8
Q ss_pred CceEEEEEEEcCCccCCCc--cCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 89 LGASLARIDYAPWGVIPPH--VHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH--~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
.++.+.++.++||...++| +|++..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~ 91 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD-----GH--TQALQAGSLIAIERGQAHEIRNTGDTPLK 91 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET-----TE--EEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEcCCCCCEE
Confidence 4678899999999988888 998779999999999999884 44 79999999999999999999999999999
Q ss_pred EEEEEcC
Q 044045 167 SISALSS 173 (215)
Q Consensus 167 ~l~~~~s 173 (215)
++.++..
T Consensus 92 ~~~v~~~ 98 (113)
T 2gu9_A 92 TVNFYHP 98 (113)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9887654
No 46
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.44 E-value=2.1e-12 Score=105.14 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=78.8
Q ss_pred ceEEEeecccCCCCCcCceEEEEEEEcCCcc------CCCccCC--CccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCC
Q 044045 73 SRVTPVTVAQIPGLNTLGASLARIDYAPWGV------IPPHVHP--RATEILTVIEGSLDVGFVTSNPENRLITKVLKKG 144 (215)
Q Consensus 73 ~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~------~~pH~Hp--~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~G 144 (215)
..+..+.....|.. ...+.+..++++||+. .++|+|+ +..|++||++|++++.+.+.. ++.+.+.|++|
T Consensus 50 ~~~~~v~~l~~~~~-~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~--g~~~~~~l~~G 126 (190)
T 1x82_A 50 PVVYEVYAVEQEEK-EGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE--GDAKWISMEPG 126 (190)
T ss_dssp CEEEEEEEECCCSC-TTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT--CCEEEEEECTT
T ss_pred ceEEEEEEecCCCC-CCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC--CcEEEEEECCC
Confidence 34555532222332 2367888889999998 7899998 357999999999999998653 45567999999
Q ss_pred CEEEEcCCCeEEEEeCCCCcEEEEEEEcCC
Q 044045 145 DVFVFPIGLAHFQRNVGHGNAFSISALSSQ 174 (215)
Q Consensus 145 Dv~~~P~G~~H~~~N~g~~~a~~l~~~~s~ 174 (215)
|++++|+|..|++.|.|++++++++++...
T Consensus 127 D~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 127 TVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 999999999999999999999999887543
No 47
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.44 E-value=9.8e-13 Score=106.49 Aligned_cols=84 Identities=17% Similarity=0.128 Sum_probs=70.6
Q ss_pred CCCCcCceEEEEEEEcCCccCC---CccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeC
Q 044045 84 PGLNTLGASLARIDYAPWGVIP---PHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNV 160 (215)
Q Consensus 84 P~l~~~gis~~~~~l~pgg~~~---pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 160 (215)
+...+..+.+.+++++||+..+ +|+|+ +.|++||++|++++.+.+. +....+.|++||+++||++.+|.+.|.
T Consensus 110 ~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~~---~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 110 RTKRAPSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGDK---ENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCTTSTTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESCT---TSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCCCCcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECCc---CCcccEEECCCCEEEeCCCCceEEEec
Confidence 3344557899999999999776 79998 5999999999999998641 111289999999999999999999999
Q ss_pred -CCCcEEEEEEE
Q 044045 161 -GHGNAFSISAL 171 (215)
Q Consensus 161 -g~~~a~~l~~~ 171 (215)
+++++++++++
T Consensus 186 ~~~~~~~~l~v~ 197 (198)
T 2bnm_A 186 KGTGSAKLIAVN 197 (198)
T ss_dssp TTSCCEEEEEEE
T ss_pred CCCCCeEEEEEe
Confidence 99999998875
No 48
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.43 E-value=4.4e-13 Score=100.21 Aligned_cols=74 Identities=15% Similarity=0.260 Sum_probs=63.9
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
+.++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ ++.|++||.+++|+|.+|.+.|.++....+
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGVD-----GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLV 104 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEET-----TE--EEEECTTEEEEECTTCCEEEEESSSEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 34678999999999999999999 58999999999999985 44 899999999999999999999987654444
Q ss_pred EE
Q 044045 168 IS 169 (215)
Q Consensus 168 l~ 169 (215)
+.
T Consensus 105 ~~ 106 (114)
T 3fjs_A 105 TV 106 (114)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 49
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.43 E-value=6.7e-13 Score=99.77 Aligned_cols=77 Identities=23% Similarity=0.429 Sum_probs=68.9
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++ +++++
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l 109 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIG-----EE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVL 109 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEET-----TE--EEEECTTEEEEECTTCCEEEECCTT-CEEEE
T ss_pred CCeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEE
Confidence 3678999999999999999999 69999999999999884 44 7999999999999999999999987 78888
Q ss_pred EEEcCC
Q 044045 169 SALSSQ 174 (215)
Q Consensus 169 ~~~~s~ 174 (215)
.++...
T Consensus 110 ~v~~p~ 115 (126)
T 4e2g_A 110 DIFSPP 115 (126)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 887643
No 50
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.43 E-value=9.9e-13 Score=100.68 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=68.8
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
+..+.+.+++++||+..++|+|++..|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|.+++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~ 126 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN-----GK--DVPIKAGDVCFTDSGESHSIENTGNTDLEF 126 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET-----TE--EEEEETTEEEEECTTCEEEEECCSSSCEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC-----CE--EEEeCCCcEEEECCCCcEEeEECCCCCEEE
Confidence 34577889999999988999998669999999999999885 44 899999999999999999999999999998
Q ss_pred EEEE
Q 044045 168 ISAL 171 (215)
Q Consensus 168 l~~~ 171 (215)
+++.
T Consensus 127 l~v~ 130 (133)
T 1o4t_A 127 LAVI 130 (133)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 51
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.42 E-value=1.1e-13 Score=101.31 Aligned_cols=79 Identities=14% Similarity=0.158 Sum_probs=68.1
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
+-.+.+.|++++||+..++|+|+...|+++|++|++++...+ ++.....+++||++++|+|..|...|.|++++++
T Consensus 14 n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~ 89 (98)
T 3lag_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVF 89 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEE
T ss_pred CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC----CceEEEEecCCcEEEEcCCCcEECEECCCCeEEE
Confidence 346889999999999999999998889999999999987643 3333567999999999999999999999999999
Q ss_pred EEE
Q 044045 168 ISA 170 (215)
Q Consensus 168 l~~ 170 (215)
+.+
T Consensus 90 IeV 92 (98)
T 3lag_A 90 LEI 92 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 976
No 52
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.42 E-value=9.3e-13 Score=104.19 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=71.7
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+..++++||+..++|+|+ ..|++||++|++++.+. ++ .+.|++||+++||+|..|.+.|.++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~-----g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l 113 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVG-----ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFL 113 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 5788999999999999999999 68999999999999985 44 8999999999999999999999999999999
Q ss_pred EEEcCCC
Q 044045 169 SALSSQN 175 (215)
Q Consensus 169 ~~~~s~~ 175 (215)
++++...
T Consensus 114 ~i~~~~~ 120 (156)
T 3kgz_A 114 CVVNAAR 120 (156)
T ss_dssp EEEESSC
T ss_pred EEEeCCC
Confidence 9886553
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.40 E-value=1.4e-12 Score=104.17 Aligned_cols=78 Identities=13% Similarity=0.070 Sum_probs=71.0
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|..|.+.|.++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~-----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l 122 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVG-----RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFL 122 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEECCTTSCEEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 5788999999999999999999 68999999999999875 44 8999999999999999999999999999999
Q ss_pred EEEcCC
Q 044045 169 SALSSQ 174 (215)
Q Consensus 169 ~~~~s~ 174 (215)
+++...
T Consensus 123 ~i~~~~ 128 (166)
T 3jzv_A 123 CMVNAE 128 (166)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 888653
No 54
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.40 E-value=1.7e-12 Score=96.51 Aligned_cols=74 Identities=14% Similarity=0.218 Sum_probs=66.1
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEE-EEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITK-VLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~-~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
++.+.++.+.||+..++|+|+ ..|++||++|++++.+. ++ .+ .|++||++++|+|.+|.+.|.++++++++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l 97 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLE-----DQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFF 97 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEET-----TS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEEC-----CE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 567888899999999999998 79999999999999885 33 56 99999999999999999999999988888
Q ss_pred EEE
Q 044045 169 SAL 171 (215)
Q Consensus 169 ~~~ 171 (215)
.+.
T Consensus 98 ~i~ 100 (117)
T 2b8m_A 98 VVK 100 (117)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 55
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.8e-12 Score=103.72 Aligned_cols=75 Identities=17% Similarity=0.078 Sum_probs=65.8
Q ss_pred ceEEEEEEEcC-CccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 90 GASLARIDYAP-WGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 90 gis~~~~~l~p-gg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
-+...+++++| |+...+|.|..+.|++||++|++++.+. ++ ++.|++||+++||+|..|.++|.++++|+++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~-----g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll 159 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC-----KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMF 159 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC-----CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEE
Confidence 36777899999 7777776555699999999999999995 44 8999999999999999999999999999999
Q ss_pred EEE
Q 044045 169 SAL 171 (215)
Q Consensus 169 ~~~ 171 (215)
++.
T Consensus 160 ~Vq 162 (166)
T 2vpv_A 160 FVQ 162 (166)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 56
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.38 E-value=2.4e-12 Score=95.20 Aligned_cols=77 Identities=22% Similarity=0.232 Sum_probs=67.3
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
++.+.+++++||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|.+ +++++.
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 102 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVD-----GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILID 102 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEEESS--CEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEEC-----CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEE
Confidence 478899999999998999999 89999999999999884 44 799999999999999999999987 678887
Q ss_pred EEcCCCC
Q 044045 170 ALSSQNP 176 (215)
Q Consensus 170 ~~~s~~p 176 (215)
++....+
T Consensus 103 v~~p~~~ 109 (116)
T 2pfw_A 103 TFSPARE 109 (116)
T ss_dssp EEESCCG
T ss_pred EECCchh
Confidence 7764433
No 57
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.38 E-value=8.2e-12 Score=97.33 Aligned_cols=78 Identities=22% Similarity=0.319 Sum_probs=69.8
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEE-EEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLIT-KVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~-~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
..++++.++.++||+..++|+|+ ..|++||++|++++.+. ++ . +.|++||++++|+|.+|++.|.++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~-----~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 116 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHP-GGQILIVTRGKGFYQER-----GK--PARILKKGDVVEIPPNVVHWHGAAPDEELV 116 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECT-TCEEEEEEEEEEEEEET-----TS--CCEEEETTCEEEECTTCCEEEEEBTTBCEE
T ss_pred CCcEEEEEEEECCCCccCceECC-CceEEEEEeCEEEEEEC-----CE--EEEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 34788999999999999999999 59999999999999885 33 5 8999999999999999999999999999
Q ss_pred EEEEEcC
Q 044045 167 SISALSS 173 (215)
Q Consensus 167 ~l~~~~s 173 (215)
+++++..
T Consensus 117 ~l~v~~~ 123 (147)
T 2f4p_A 117 HIGISTQ 123 (147)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 9887754
No 58
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.37 E-value=6.8e-12 Score=94.45 Aligned_cols=75 Identities=19% Similarity=0.168 Sum_probs=67.7
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+...+++||...++|||. ..|++||++|++++.+. ++ .+.+++||++++|+|.+|.+.|.+++++.++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~-----~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 103 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIN-----DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFY 103 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEEC-----CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEE
Confidence 4578889999999999999997 89999999999999985 44 8999999999999999999999999988887
Q ss_pred EEE
Q 044045 169 SAL 171 (215)
Q Consensus 169 ~~~ 171 (215)
++.
T Consensus 104 ~i~ 106 (128)
T 4i4a_A 104 TIW 106 (128)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 59
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.37 E-value=1.8e-12 Score=98.09 Aligned_cols=77 Identities=18% Similarity=0.168 Sum_probs=69.5
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
..++++.+++++||+..++|+|+ ..|++||++|++++.+. ++ ++.+++||++++|+|.+|.+.|.+++++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~ 116 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE-----QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEF 116 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 45789999999999998999999 79999999999999875 34 799999999999999999999999999998
Q ss_pred EEEEc
Q 044045 168 ISALS 172 (215)
Q Consensus 168 l~~~~ 172 (215)
++++.
T Consensus 117 l~v~~ 121 (126)
T 1vj2_A 117 LCLIP 121 (126)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 87764
No 60
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.35 E-value=4.3e-12 Score=102.41 Aligned_cols=77 Identities=19% Similarity=0.189 Sum_probs=66.7
Q ss_pred CcCceEEEEEEEcCCccCC--CccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCc
Q 044045 87 NTLGASLARIDYAPWGVIP--PHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGN 164 (215)
Q Consensus 87 ~~~gis~~~~~l~pgg~~~--pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~ 164 (215)
.+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+. ++ .+.|++||+++||+|.+|.+.|.++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~-----~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~ 171 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFD-----EQ--WHELQQGEHIRFFSDQPHGYAAVTEKA 171 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEET-----TE--EEEECTTCEEEEECSSSEEEEESSSCE
T ss_pred CCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEEcCCCCeEeECCCCCc
Confidence 3457889999999998765 67776 79999999999999885 34 799999999999999999999999999
Q ss_pred EEEEEEEc
Q 044045 165 AFSISALS 172 (215)
Q Consensus 165 a~~l~~~~ 172 (215)
+ +++++.
T Consensus 172 ~-~l~v~~ 178 (192)
T 1y9q_A 172 V-FQNIVA 178 (192)
T ss_dssp E-EEEEEE
T ss_pred E-EEEEEe
Confidence 9 777654
No 61
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.35 E-value=4.8e-12 Score=96.25 Aligned_cols=79 Identities=15% Similarity=0.131 Sum_probs=60.5
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEE
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 170 (215)
+.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ .+.|++||++++|+|.+|.+.|.+++ ++++.+
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED----IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT----TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC----cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 346666667888889999996699999999999998852 14 89999999999999999999998774 677777
Q ss_pred EcCCCC
Q 044045 171 LSSQNP 176 (215)
Q Consensus 171 ~~s~~p 176 (215)
+.....
T Consensus 116 ~~p~~~ 121 (134)
T 2o8q_A 116 VSPAGF 121 (134)
T ss_dssp ESSTTC
T ss_pred ECCCch
Confidence 665443
No 62
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.35 E-value=1.1e-12 Score=96.06 Aligned_cols=77 Identities=14% Similarity=0.187 Sum_probs=64.8
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+.+.+++|+||+...+|.|+...+++++++|++++... + ++.....+++||++++|+|..|+..|.|+++++++.
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~--d--G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAP--D--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECT--T--SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeC--C--CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 678999999999999999999766677778898887653 2 332257899999999999999999999999999997
Q ss_pred E
Q 044045 170 A 170 (215)
Q Consensus 170 ~ 170 (215)
+
T Consensus 92 v 92 (98)
T 2ozi_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 6
No 63
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.34 E-value=8.3e-12 Score=92.13 Aligned_cols=73 Identities=16% Similarity=0.261 Sum_probs=63.8
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||++++|+|.+|.+.|.+ +++++
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~ 107 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITID-----QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQML 107 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTSCEEEEESS--CEEEE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEECC--CceEE
Confidence 3578899999999999999999 79999999999999874 44 789999999999999999999987 46666
Q ss_pred EEE
Q 044045 169 SAL 171 (215)
Q Consensus 169 ~~~ 171 (215)
+++
T Consensus 108 ~v~ 110 (115)
T 1yhf_A 108 LVV 110 (115)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 64
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.34 E-value=6e-12 Score=94.72 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=66.4
Q ss_pred cCceEEEEEEEcCCccCC-CccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 88 TLGASLARIDYAPWGVIP-PHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~-pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
..++.+.++.++||...+ +|+|+...+++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|.++++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID-----GE--KIELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET-----TE--EEEEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 446788888999999888 89999434455599999999885 44 79999999999999999999999988898
Q ss_pred EEEEEcC
Q 044045 167 SISALSS 173 (215)
Q Consensus 167 ~l~~~~s 173 (215)
++++...
T Consensus 96 ~~~i~~~ 102 (125)
T 3cew_A 96 FLCIQVK 102 (125)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 8876543
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.32 E-value=5.7e-12 Score=106.92 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=67.2
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC-CcEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH-GNAF 166 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~ 166 (215)
...+.+.+++++||+..+.|+|+...|++||++|++++.+. ++ .+.|++||+++||+|.+|++.|.|+ ++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~-----~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~ 248 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD-----NN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFS 248 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS-----SC--EEEEETTCEEEECSSEEEEEEEC----CEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC-----CE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEE
Confidence 45688999999999999999998789999999999999885 34 7999999999999999999999999 9999
Q ss_pred EEEEEc
Q 044045 167 SISALS 172 (215)
Q Consensus 167 ~l~~~~ 172 (215)
++.+.+
T Consensus 249 ~l~~~d 254 (261)
T 1rc6_A 249 YIYSKD 254 (261)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 887653
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.31 E-value=8.5e-12 Score=104.86 Aligned_cols=81 Identities=19% Similarity=0.116 Sum_probs=70.5
Q ss_pred ceEEEEEEEcC-CccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 90 GASLARIDYAP-WGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 90 gis~~~~~l~p-gg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
-+.+..++++| |+..++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|.|+++++++
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l 215 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVE-----GC--TVEMKFGTAYFCEPREDHGAINRSEKESKSI 215 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 35677788999 8888999999 68999999999999885 34 7899999999999999999999999999999
Q ss_pred EEEcCCCCce
Q 044045 169 SALSSQNPGV 178 (215)
Q Consensus 169 ~~~~s~~pg~ 178 (215)
.++.....+.
T Consensus 216 ~v~~p~~~d~ 225 (243)
T 3h7j_A 216 NIFFPPRYNR 225 (243)
T ss_dssp EEEESCSSCC
T ss_pred EEEcCChhcc
Confidence 9987544433
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.27 E-value=2.5e-11 Score=88.43 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=63.5
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEE-EEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEI-LTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~-~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
.++.+.++.+.||...++|+|+...|+ +||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.++ +.+
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~ 102 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG----DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKV 102 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG----GC--EEEECTTEEEEEETTSCEEEEESSS--EEE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC----CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEE
Confidence 357888999999999999999955787 89999999998741 13 7999999999999999999999865 556
Q ss_pred EEEEc
Q 044045 168 ISALS 172 (215)
Q Consensus 168 l~~~~ 172 (215)
+.++.
T Consensus 103 l~~~~ 107 (110)
T 2q30_A 103 LVTIA 107 (110)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 65554
No 68
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.27 E-value=2.9e-11 Score=89.41 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=61.9
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+.+..+.+.||...++|+|+ ..|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|. +++++++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~-----~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~ 106 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFD-----DQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQ 106 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEEC-----CE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEE
Confidence 356777788999999999999 79999999999999885 44 89999999999999999999996 4667666
Q ss_pred EE
Q 044045 170 AL 171 (215)
Q Consensus 170 ~~ 171 (215)
+.
T Consensus 107 i~ 108 (114)
T 2ozj_A 107 IT 108 (114)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.27 E-value=4.8e-11 Score=101.97 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=68.4
Q ss_pred cCceEEEEEEEcCCccCCC-ccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC-CcE
Q 044045 88 TLGASLARIDYAPWGVIPP-HVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH-GNA 165 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~p-H~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a 165 (215)
+..+.+.+++++||+..+. |+|+ ..|++||++|++++.+. ++ .+.|++||+++||++.+|.++|.++ +++
T Consensus 179 ~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~-----~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~ 250 (274)
T 1sef_A 179 DFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLD-----NE--WYPVEKGDYIFMSAYVPQAAYAVGREEPL 250 (274)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEEECSSSCE
T ss_pred CCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCCE
Confidence 3478899999999999888 9997 78999999999999985 44 7999999999999999999999999 888
Q ss_pred EEEEEE
Q 044045 166 FSISAL 171 (215)
Q Consensus 166 ~~l~~~ 171 (215)
+++...
T Consensus 251 ~~l~~~ 256 (274)
T 1sef_A 251 MYVYSK 256 (274)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888764
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.24 E-value=4.1e-11 Score=104.08 Aligned_cols=78 Identities=22% Similarity=0.236 Sum_probs=69.3
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+++.++.+.||+..++|||+++.|++||++|++++.+. ++ .+.|++||++++|+|.+|.+.|.++ +++++
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~ 115 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD-----GE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLV 115 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECST-TEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEECCC-CeEEE
Confidence 3688999999999999999998789999999999999974 44 7999999999999999999999987 58888
Q ss_pred EEEcCC
Q 044045 169 SALSSQ 174 (215)
Q Consensus 169 ~~~~s~ 174 (215)
.++...
T Consensus 116 ~~~~p~ 121 (337)
T 1y3t_A 116 SYTMKG 121 (337)
T ss_dssp EEEETT
T ss_pred EEECCC
Confidence 876544
No 71
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.23 E-value=3.1e-11 Score=103.75 Aligned_cols=77 Identities=21% Similarity=0.190 Sum_probs=68.0
Q ss_pred cCceEEEEEEEcCCccC--CCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcE
Q 044045 88 TLGASLARIDYAPWGVI--PPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNA 165 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~--~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 165 (215)
+..+++.+++++||+.. +.|.|. ..|++||++|++++.+. ++ ++.|++||.++||+|.+|.++|.|++++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~-----g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~ 136 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQ-----GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHT 136 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEES-----SC--EEEECTTEEEEECTTCCEEEECCSSSCE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEECCCCCE
Confidence 34689999999999876 557787 89999999999999986 34 7999999999999999999999999999
Q ss_pred EEEEEEc
Q 044045 166 FSISALS 172 (215)
Q Consensus 166 ~~l~~~~ 172 (215)
+++++..
T Consensus 137 ~~l~v~~ 143 (278)
T 1sq4_A 137 RFHWIRK 143 (278)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9988764
No 72
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.23 E-value=1e-10 Score=98.61 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=68.0
Q ss_pred cCceEEEEEEEcCCccCCC-ccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 88 TLGASLARIDYAPWGVIPP-HVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~p-H~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
+..+.+.+++++||+..+. |.|. ..|.+||++|++++.++ ++ .+.|++||+++++++.+|+++|.|+++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~-----~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~ 233 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLE-----EN--YYPVTAGDIIWMGAHCPQWYGALGRNWSK 233 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEEC-----CE--EEEcCCCCEEEECCCCCEEEEcCCCCCEE
Confidence 5678999999999999886 4565 78999999999999985 44 89999999999999999999999999999
Q ss_pred EEEEE
Q 044045 167 SISAL 171 (215)
Q Consensus 167 ~l~~~ 171 (215)
++.+=
T Consensus 234 yl~~k 238 (246)
T 1sfn_A 234 YLLYK 238 (246)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98764
No 73
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.22 E-value=3.8e-11 Score=101.81 Aligned_cols=77 Identities=14% Similarity=0.024 Sum_probs=67.1
Q ss_pred CceEEEEEEEcCCccCCCcc-CCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 89 LGASLARIDYAPWGVIPPHV-HPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~-Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
..+.+.+++++||+....|. |+.+.|++||++|++++.+. ++ ++.|++||.++||++.+|.++|.+++++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~ 129 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE-----GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQI 129 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET-----TE--EEEEETTEEEEECTTCCCEEEECSSSCEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 46788999999998776554 45578999999999999985 44 899999999999999999999999999999
Q ss_pred EEEEc
Q 044045 168 ISALS 172 (215)
Q Consensus 168 l~~~~ 172 (215)
+++..
T Consensus 130 l~v~~ 134 (261)
T 1rc6_A 130 FLYKR 134 (261)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98874
No 74
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.22 E-value=5e-11 Score=90.07 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=62.3
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+++..++++||.....| ....|++||++|++++.+. ++ +++|++||+++||+|..|.+.|.+ ++++++
T Consensus 38 ~~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~-----g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l 107 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTD-----GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTA 107 (119)
T ss_dssp CCCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEE
T ss_pred CCEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEE
Confidence 3578889999999866555 4589999999999999984 44 799999999999999999999875 678877
Q ss_pred EEEc
Q 044045 169 SALS 172 (215)
Q Consensus 169 ~~~~ 172 (215)
.+..
T Consensus 108 ~v~~ 111 (119)
T 3lwc_A 108 YVTY 111 (119)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 7665
No 75
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.19 E-value=1.7e-10 Score=102.09 Aligned_cols=81 Identities=21% Similarity=0.237 Sum_probs=64.9
Q ss_pred ceEEEEEEEcCCc-cCC--CccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 90 GASLARIDYAPWG-VIP--PHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 90 gis~~~~~l~pgg-~~~--pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
.+++. ..+.|++ ..+ +|+|++..|++||++|++++.+.+.+ ++...+.|++||+++||+|.+|.++|.++++ +
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~--g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~ 122 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN--ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-E 122 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT--SCCEEEEEETTCEEEECTTEEEEEEECSTTE-E
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC--CceEEEEECCCCEEEECCCCcEEEEeCCCCC-E
Confidence 45666 4455555 455 89999889999999999999998633 3334899999999999999999999998876 7
Q ss_pred EEEEEcCC
Q 044045 167 SISALSSQ 174 (215)
Q Consensus 167 ~l~~~~s~ 174 (215)
++.++...
T Consensus 123 ~l~v~~p~ 130 (350)
T 1juh_A 123 MTGVIVPG 130 (350)
T ss_dssp EEEEEESS
T ss_pred EEEEEcCc
Confidence 77776543
No 76
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.19 E-value=6.1e-11 Score=99.61 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=65.4
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE-EcCCCeEEEEeCCCCcEEEEE
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV-FPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~-~P~G~~H~~~N~g~~~a~~l~ 169 (215)
..+.++.++||...++|+|+ ..|++||++|++++.+. ++ ++.|++||.++ +|+|.+|.++|.++++++++.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~ 105 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVG-----DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAID 105 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEET-----TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEE
Confidence 35777789999999999999 79999999999999984 44 79999999995 999999999999999999887
Q ss_pred EE
Q 044045 170 AL 171 (215)
Q Consensus 170 ~~ 171 (215)
+.
T Consensus 106 i~ 107 (243)
T 3h7j_A 106 IK 107 (243)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 77
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.19 E-value=5.6e-11 Score=101.63 Aligned_cols=106 Identities=11% Similarity=0.022 Sum_probs=79.9
Q ss_pred CccccCCccccccccCCCCCCCCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEE
Q 044045 48 PKLAQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGF 127 (215)
Q Consensus 48 p~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~ 127 (215)
.+-++++|++.+.+.. -.|..++.+-.... +..+++.+++++||+..+.|.|. ++|++||++|++++.+
T Consensus 37 ~avI~~~~iv~s~lPg------~~~~~~~vL~sP~~----G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l 105 (266)
T 4e2q_A 37 HALITPESHVYSPLPD------WTNTLGAYLITPAT----GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTN 105 (266)
T ss_dssp EEEECGGGCCCEECTT------SSSEEEEEEECGGG----TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC
T ss_pred eEEECccceEEeeCCC------CcCEEEEEEcCCCC----CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEE
Confidence 4566667888775421 23334444433332 24688999999999988888776 8999999999999998
Q ss_pred EecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEc
Q 044045 128 VTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALS 172 (215)
Q Consensus 128 ~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~ 172 (215)
.+ ++ +++|++||.++||++..|+++|. ++++++++..
T Consensus 106 ~~----g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 106 TS----SS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp ------CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred CC----Cc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 61 23 79999999999999999999995 6899888753
No 78
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.17 E-value=6.7e-11 Score=101.08 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=67.3
Q ss_pred cCceEEEEEEEcCCccCCCcc-CCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 88 TLGASLARIDYAPWGVIPPHV-HPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~-Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
+..+++.+++++||+....|. |+.+.|++||++|++++.+. ++ ++.|++||.++||++.+|.++|.++++++
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~ 131 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG-----QE--THELEAGGYAYFTPEMKMYLANAQEADTE 131 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTSCCEEEESSSSCEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeCCCCCEE
Confidence 346789999999998766554 45578999999999999985 34 79999999999999999999999999999
Q ss_pred EEEEEc
Q 044045 167 SISALS 172 (215)
Q Consensus 167 ~l~~~~ 172 (215)
++++..
T Consensus 132 ~l~v~~ 137 (274)
T 1sef_A 132 VFLYKK 137 (274)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998773
No 79
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.16 E-value=3.7e-10 Score=98.04 Aligned_cols=75 Identities=21% Similarity=0.209 Sum_probs=63.5
Q ss_pred EEEEEEcC-CccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 044045 93 LARIDYAP-WGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL 171 (215)
Q Consensus 93 ~~~~~l~p-gg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 171 (215)
...+.+.| |...++|||+++.|++||++|++++.+. ++ ++.|++||+++||++.+|++.|.++ ++++++++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~-----~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~ 290 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD-----GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVL 290 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEE
Confidence 34455656 5677899999779999999999999985 44 8999999999999999999999998 89999888
Q ss_pred cCCC
Q 044045 172 SSQN 175 (215)
Q Consensus 172 ~s~~ 175 (215)
+...
T Consensus 291 ~~~~ 294 (337)
T 1y3t_A 291 VPGL 294 (337)
T ss_dssp ESST
T ss_pred cCcc
Confidence 6543
No 80
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.16 E-value=9e-11 Score=90.38 Aligned_cols=71 Identities=20% Similarity=0.112 Sum_probs=60.4
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+++..++++|| ..|||....|++||++|++++.+. ++ ++.|++||+++||+|..|.+.| .++++++.
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~-----g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~ 123 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE-----GE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLY 123 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEE--EEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC-----CE--EEEECCCcEEEECCCCEEEEEe--CCCEEEEE
Confidence 578889999999 456765589999999999999985 34 7899999999999999999997 45788887
Q ss_pred EEc
Q 044045 170 ALS 172 (215)
Q Consensus 170 ~~~ 172 (215)
++.
T Consensus 124 v~~ 126 (133)
T 2pyt_A 124 VAW 126 (133)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 81
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.16 E-value=1.9e-10 Score=85.64 Aligned_cols=75 Identities=23% Similarity=0.287 Sum_probs=58.4
Q ss_pred CceEEEEEEEcCCccCCC---ccCCCccEEEEEEeCEEEEEEEecCCCCeeEE--EEEcCCCEEEEcCCCeEEEEeCCCC
Q 044045 89 LGASLARIDYAPWGVIPP---HVHPRATEILTVIEGSLDVGFVTSNPENRLIT--KVLKKGDVFVFPIGLAHFQRNVGHG 163 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~p---H~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~--~~L~~GDv~~~P~G~~H~~~N~g~~ 163 (215)
.++.+.++. .+|...++ |.|+ ..|++||++|++++.+.+ + . +.|++||+++||+|.+|.+.|.+++
T Consensus 29 ~~~~i~~i~-~~g~~~~~~~~~~~~-~~E~~~Vl~G~~~l~~~~-----~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~~ 99 (112)
T 2opk_A 29 KGLKIERII-SNGQASPPGFWYDSP-QDEWVMVVSGSAGIECEG-----D--TAPRVMRPGDWLHVPAHCRHRVAWTDGG 99 (112)
T ss_dssp TTEEEEEEE-ESSCCCCTTCCBCCS-SEEEEEEEESCEEEEETT-----C--SSCEEECTTEEEEECTTCCEEEEEECSS
T ss_pred CCEEEEEEE-eCCccCCCCccccCC-ccEEEEEEeCeEEEEECC-----E--EEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 356677764 45555544 4455 899999999999999863 3 4 8999999999999999999999976
Q ss_pred -cEEEEEEEc
Q 044045 164 -NAFSISALS 172 (215)
Q Consensus 164 -~a~~l~~~~ 172 (215)
++++++++.
T Consensus 100 ~~~~~l~v~~ 109 (112)
T 2opk_A 100 EPTVWLAVHC 109 (112)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 666676664
No 82
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.15 E-value=8e-11 Score=86.12 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=54.2
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 170 (215)
..++.+.||. .++|+|+...|++||++|++++.+.+ ++ .+.|++||++++|+|.+|.+.|. ++++++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD----GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT----SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC----Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 4456677776 45999995599999999999998853 14 79999999999999999999995 45666543
No 83
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.14 E-value=7.5e-11 Score=104.64 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=67.9
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+....++||+..++|+|+ ..|++||++|+++++.++ ++ ++.+++||++++|+|..|.+.|.++++++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~----g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l 170 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD----GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWL 170 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET----TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC----CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 3678899999999999999998 789999999999884442 44 7999999999999999999999999999998
Q ss_pred EEEc
Q 044045 169 SALS 172 (215)
Q Consensus 169 ~~~~ 172 (215)
.+.+
T Consensus 171 ~v~d 174 (354)
T 2d40_A 171 DGLD 174 (354)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7764
No 84
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.13 E-value=2.3e-10 Score=95.21 Aligned_cols=73 Identities=19% Similarity=0.287 Sum_probs=63.9
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+.+.++.++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||.+++|+|.+|++.|. .++++++.
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~-----g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVD-----GK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEET-----TE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEEC-----CE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 578889999999999999999 78999999999999985 44 89999999999999999999993 45677766
Q ss_pred EE
Q 044045 170 AL 171 (215)
Q Consensus 170 ~~ 171 (215)
++
T Consensus 223 ~~ 224 (227)
T 3rns_A 223 IL 224 (227)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 85
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.10 E-value=5e-10 Score=99.32 Aligned_cols=89 Identities=18% Similarity=0.045 Sum_probs=72.4
Q ss_pred CCceEEEeecc-cCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEE
Q 044045 71 LGSRVTPVTVA-QIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVF 149 (215)
Q Consensus 71 ~g~~~~~~~~~-~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 149 (215)
.|+.+..++.. .++.+.+++ +....++||+..++|+|+. .|+.||++|++++.++ ++ ++.+++||++++
T Consensus 249 ~G~~~~~~np~t~~~~~~ti~--~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~-----~~--~~~~~~GD~~~v 318 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSMG--AFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG-----NE--TFSFSAKDIFVV 318 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSCE--EEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET-----TE--EEEEETTCEEEE
T ss_pred CCeEEEEeCCCcCCCCCCcce--eEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC-----CE--EEEEcCCCEEEE
Confidence 46677777744 566666654 4455799999999999995 5999999999999984 44 899999999999
Q ss_pred cCCCeEEEEeCCCCcEEEEEEE
Q 044045 150 PIGLAHFQRNVGHGNAFSISAL 171 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~l~~~ 171 (215)
|++..|++.|. ++++++++.
T Consensus 319 P~~~~H~~~n~--e~~~l~~~~ 338 (354)
T 2d40_A 319 PTWHGVSFQTT--QDSVLFSFS 338 (354)
T ss_dssp CTTCCEEEEEE--EEEEEEEEE
T ss_pred CCCCeEEEEeC--CCEEEEEEc
Confidence 99999999993 677777663
No 86
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.10 E-value=7.3e-10 Score=95.12 Aligned_cols=85 Identities=16% Similarity=0.071 Sum_probs=72.9
Q ss_pred ccCCCCCcCceEEEEEEEcCCccCCC-ccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEe
Q 044045 81 AQIPGLNTLGASLARIDYAPWGVIPP-HVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRN 159 (215)
Q Consensus 81 ~~~P~l~~~gis~~~~~l~pgg~~~p-H~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N 159 (215)
...|.-....+.+.+++++||+..+. |.|. ..|.+||++|++++.++ ++ .+.|++||+++++.+.+|+++|
T Consensus 181 ~l~p~~~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~-----~~--~~~v~~GD~~~~~~~~~h~~~n 252 (278)
T 1sq4_A 181 FVDMSDMRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLN-----QD--WVEVEAGDFMWLRAFCPQACYS 252 (278)
T ss_dssp SSCTTCTTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEET-----TE--EEEEETTCEEEEEESCCEEEEC
T ss_pred EecCCCcCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEEC-----CE--EEEeCCCCEEEECCCCCEEEEc
Confidence 34454456689999999999999997 4555 68999999999999885 44 8999999999999999999999
Q ss_pred CCCCcEEEEEEEcC
Q 044045 160 VGHGNAFSISALSS 173 (215)
Q Consensus 160 ~g~~~a~~l~~~~s 173 (215)
.|+++++++.+.+-
T Consensus 253 ~g~~~~~yl~~~d~ 266 (278)
T 1sq4_A 253 GGPGRFRYLLYKDV 266 (278)
T ss_dssp CSSSCEEEEEEEEC
T ss_pred CCCCCEEEEEEEEc
Confidence 99999999988753
No 87
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.08 E-value=4.3e-10 Score=93.07 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=68.1
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
...+.+..+.++||...|.|.|+ .+|+.||++|++++.+.+ ++ .+.+++||++++|+|++|.++ .+++++.+
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~----g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePlla 200 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN----AP--DLMLEPGQTRFHPANAPHAMT-TLTDPILT 200 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT----SC--CEEECTTCEEEECTTCCEEEE-CCSSCEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC----CC--EEecCCCCEEEcCCCCceeEE-ECCccEEE
Confidence 34688999999999999999999 799999999999999862 23 799999999999999999998 48899988
Q ss_pred EEEEc
Q 044045 168 ISALS 172 (215)
Q Consensus 168 l~~~~ 172 (215)
+++..
T Consensus 201 lwvW~ 205 (217)
T 4b29_A 201 LVLWR 205 (217)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87764
No 88
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.07 E-value=6.2e-10 Score=92.56 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=64.8
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
+..+.++.+.||...++|.|+ ..|++||++|++++.+. ++ ++.|++||++++|+|.+|.+.|. ++++++.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~-----~~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~ 105 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIE-----NN--KKTISNGDFLEITANHNYSIEAR--DNLKLIE 105 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEES-----SC--EEEEETTEEEEECSSCCEEEEES--SSEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEEC--CCcEEEE
Confidence 567899999999999999999 79999999999999986 34 79999999999999999999986 4688887
Q ss_pred EEc
Q 044045 170 ALS 172 (215)
Q Consensus 170 ~~~ 172 (215)
+..
T Consensus 106 i~~ 108 (227)
T 3rns_A 106 IGE 108 (227)
T ss_dssp EEE
T ss_pred EEe
Confidence 653
No 89
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.07 E-value=3.3e-09 Score=90.65 Aligned_cols=86 Identities=13% Similarity=0.144 Sum_probs=72.1
Q ss_pred ceEEEeecccCCCCCcCceEEEEEEEcCCccCCC-ccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcC
Q 044045 73 SRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPP-HVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPI 151 (215)
Q Consensus 73 ~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~p-H~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~ 151 (215)
...+.+...+. ...+.+.+++++||+..+. |+|. .+|.+||++|++.+.+. ++ .+.+++||++++++
T Consensus 172 ~~~r~l~p~~~----~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~-----~~--~~~V~~GD~i~~~~ 239 (266)
T 4e2q_A 172 FELRKLLPMSV----AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLG-----DN--WYPVQAGDVIWMAP 239 (266)
T ss_dssp SEEEESSCCST----TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEET-----TE--EEEEETTCEEEECT
T ss_pred EEEEEccCccc----ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEEC-----CE--EEEecCCCEEEECC
Confidence 33444444442 4578899999999999996 7777 78999999999999985 44 89999999999999
Q ss_pred CCeEEEEeCCCCcEEEEEE
Q 044045 152 GLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 152 G~~H~~~N~g~~~a~~l~~ 170 (215)
+.+|++.|.|++++++|..
T Consensus 240 ~~~h~~~n~G~e~~~yl~y 258 (266)
T 4e2q_A 240 FVPQWYAALGKTRSRYLLY 258 (266)
T ss_dssp TCCEEEEEESSSCEEEEEE
T ss_pred CCcEEEEeCCCCCEEEEEE
Confidence 9999999999999999864
No 90
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.07 E-value=4.1e-10 Score=80.84 Aligned_cols=59 Identities=25% Similarity=0.483 Sum_probs=49.8
Q ss_pred ccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 102 GVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 102 g~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
+..++|+|+...|++||++|++++.+. ++ .+.+++||++++|+|..|.+.|.+ ++.++.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 98 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFR-----DQ--NITLQAGEMYVIPKGVEHKPMAKE--ECKIMI 98 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECS-----SC--EEEEETTEEEEECTTCCBEEEEEE--EEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEEC-----CE--EEEEcCCCEEEECCCCeEeeEcCC--CCEEEE
Confidence 457899999659999999999999875 34 799999999999999999999974 455443
No 91
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.04 E-value=1.2e-09 Score=86.43 Aligned_cols=70 Identities=19% Similarity=0.148 Sum_probs=58.0
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEe--CEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIE--GSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~--G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
+++..+++ ++..++|||+...|++||++ |++++.+. ++ .+.|++||+++||+|..|++.+ +++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id-----ge--~~~l~~GD~v~IPpg~~H~i~g----~l~~L 113 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN-----GQ--SYPLTKLLAISIPPLVRHRIVG----EATII 113 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET-----TE--EEECCTTEEEEECTTCCEEEES----CEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC-----CE--EEEeCCCCEEEECCCCeEeeEC----CEEEE
Confidence 45666555 45568999987889999999 99999985 44 7999999999999999999973 68888
Q ss_pred EEEcC
Q 044045 169 SALSS 173 (215)
Q Consensus 169 ~~~~s 173 (215)
+++..
T Consensus 114 ~I~~P 118 (157)
T 4h7l_A 114 NIVSP 118 (157)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 87753
No 92
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.03 E-value=7.7e-10 Score=87.08 Aligned_cols=72 Identities=18% Similarity=0.080 Sum_probs=58.8
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+++..++++ ++ +.|||...+|+.||++|++++.+. ++ ++.|++||+++||+|..|.+.|. +++++++
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i~-----g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~ 132 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIIID-----GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIY 132 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEEC-----CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEE
Confidence 4677777776 33 356666689999999999999973 44 89999999999999999999997 6788888
Q ss_pred EEcC
Q 044045 170 ALSS 173 (215)
Q Consensus 170 ~~~s 173 (215)
+...
T Consensus 133 V~~P 136 (151)
T 4axo_A 133 VTYP 136 (151)
T ss_dssp EEEC
T ss_pred EECC
Confidence 7653
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.02 E-value=1.7e-09 Score=97.13 Aligned_cols=78 Identities=17% Similarity=0.044 Sum_probs=69.1
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEe-CCCCcEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRN-VGHGNAF 166 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N-~g~~~a~ 166 (215)
+..+.+....+.||...++|.|. ..|+.||++|++.+..++ ++ +..+++||++++|.|..|...| .|+++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v~----G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~ 192 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIVD----GH--KVELGANDFVLTPNGTWHEHGILESGTECI 192 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEET----TE--EEEECTTCEEEECTTCCEEEEECTTCCCEE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEEC----CE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEE
Confidence 45788999999999999999998 579999999999774442 44 8999999999999999999999 9999999
Q ss_pred EEEEEc
Q 044045 167 SISALS 172 (215)
Q Consensus 167 ~l~~~~ 172 (215)
++++++
T Consensus 193 ~l~v~d 198 (394)
T 3bu7_A 193 WQDGLD 198 (394)
T ss_dssp EEEEEC
T ss_pred EEEccc
Confidence 998764
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.01 E-value=4.9e-09 Score=94.18 Aligned_cols=91 Identities=18% Similarity=0.065 Sum_probs=73.5
Q ss_pred CceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcC
Q 044045 72 GSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPI 151 (215)
Q Consensus 72 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~ 151 (215)
|..+..++... .+-....+.+....++||+..++|.|. ..|++||++|++++.++ ++ ++.+++||++++|+
T Consensus 276 ~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~-----ge--~~~~~~GD~~~iP~ 346 (394)
T 3bu7_A 276 GLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVG-----GK--RFDWSEHDIFCVPA 346 (394)
T ss_dssp BEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEET-----TE--EEEECTTCEEEECT
T ss_pred ceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEEC-----CE--EEEEeCCCEEEECC
Confidence 44455555442 222233577888889999999999999 67999999999988774 44 89999999999999
Q ss_pred CCeEEEEeCC-CCcEEEEEEE
Q 044045 152 GLAHFQRNVG-HGNAFSISAL 171 (215)
Q Consensus 152 G~~H~~~N~g-~~~a~~l~~~ 171 (215)
|..|.+.|.| +++++++++-
T Consensus 347 g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 347 WTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp TCCEEEEECCSSCCEEEEEEE
T ss_pred CCeEEeEeCCCCCCeEEEEee
Confidence 9999999998 7898888764
No 95
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.99 E-value=1.1e-09 Score=97.58 Aligned_cols=77 Identities=21% Similarity=0.131 Sum_probs=67.9
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+....+.||+..++|.|. ..|+.||++|++.+..++ ++ +..+++||++++|+|..|.+.|.|+++++++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vd----G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l 173 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVN----GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWI 173 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEET----TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEEC----CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEE
Confidence 4688888999999999999998 689999999999633332 44 8999999999999999999999999999999
Q ss_pred EEEc
Q 044045 169 SALS 172 (215)
Q Consensus 169 ~~~~ 172 (215)
.+++
T Consensus 174 ~v~D 177 (368)
T 3nw4_A 174 DGLD 177 (368)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 8775
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.94 E-value=1.3e-08 Score=82.98 Aligned_cols=84 Identities=19% Similarity=0.224 Sum_probs=66.5
Q ss_pred EEEEEEEcCCc----------cCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC
Q 044045 92 SLARIDYAPWG----------VIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG 161 (215)
Q Consensus 92 s~~~~~l~pgg----------~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 161 (215)
+...+.+.|+. ..++|+|+ ..|++||++|++.+.+.+.+ ++.++..+++||++++|+|+.|++.+..
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~-~~Ei~yVleG~G~f~i~d~~--d~~~~i~v~~GDlIiIPaG~~H~f~~~~ 151 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHL-DEEIRYILEGSGYFDVRDKE--DKWIRISMEKGDMITLPAGIYHRFTLDE 151 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECS-SCEEEEEEEEEEEEEEECTT--SCEEEEEEETTEEEEECTTCCEEEEECT
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECC-cceEEEEEeceEEEEECCCC--CeEEEEEECCCCEEEECcCCcCCcccCC
Confidence 44556677775 23789999 59999999999999998643 4555679999999999999999999877
Q ss_pred CCcEEEEEEEcCCCCcee
Q 044045 162 HGNAFSISALSSQNPGVI 179 (215)
Q Consensus 162 ~~~a~~l~~~~s~~pg~~ 179 (215)
+.....+-+|.. .|+..
T Consensus 152 ~~~~~airlF~~-~~~W~ 168 (191)
T 1vr3_A 152 KNYVKAMRLFVG-EPVWT 168 (191)
T ss_dssp TCCEEEEEEESS-SCCCC
T ss_pred CCCEEEEEEECC-CCCcc
Confidence 777777777754 46554
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.93 E-value=1.6e-09 Score=79.52 Aligned_cols=64 Identities=19% Similarity=0.182 Sum_probs=51.3
Q ss_pred EEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 95 RIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 95 ~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
...+.||.. ++| |+ ..|++||++|++++.+.+ ++ .+.|++||+++||+|.+|.+.|.++....+
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTED----GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETT----CC--EEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECC----CC--EEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 456788764 345 76 899999999999999851 23 799999999999999999999987654433
No 98
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.92 E-value=2.9e-09 Score=89.66 Aligned_cols=71 Identities=17% Similarity=0.123 Sum_probs=62.2
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+.+++++||+....|. ..|++||++|++++.+. ++ ++.|++||.++||++.+|.++|. ++++++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~-----~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l 115 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG-----GE--TRTLREYDYVYLPAGEKHMLTAK--TDARVS 115 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS-----SC--EEEECTTEEEEECTTCCCEEEEE--EEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC-----CE--EEEECCCCEEEECCCCCEEEEeC--CCEEEE
Confidence 46788999999999877774 78999999999999985 34 79999999999999999999998 678887
Q ss_pred EEE
Q 044045 169 SAL 171 (215)
Q Consensus 169 ~~~ 171 (215)
++.
T Consensus 116 ~v~ 118 (246)
T 1sfn_A 116 VFE 118 (246)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 99
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.85 E-value=3.8e-09 Score=80.25 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=55.7
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNA 165 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a 165 (215)
.+++..+++.||... .|+|. ..|++||++|++++.+.+ ++ ..+|++||+++||+|..|.+.|.++...
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~~----g~--~~~l~~GD~~~ip~g~~h~~~~~~~~rK 115 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDPD----GT--VHAVKAGDAFIMPEGYTGRWEVDRHVKK 115 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECTT----CC--EEEEETTCEEEECTTCCCEEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEECC----Ce--EEEECCCCEEEECCCCeEEEEECCceeE
Confidence 477888889998654 46665 499999999999998731 34 7899999999999999999999876443
No 100
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.84 E-value=2.8e-08 Score=71.87 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=63.6
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE-cCCCCceeeech---hhhcCCCCCCHHHHHHHcCCCHHHHHhh
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL-SSQNPGVITIAN---AVFGSNPSIADDLLAKAFQLDKSVVGQL 211 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~lf~~~p~~p~~vl~~af~~~~~~v~~l 211 (215)
.+...|++||+++||+|.+-...+.. ...+++.- +.+++....++. +++.. ||.++++.+|+++.+++++|
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l 79 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEEL 79 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHH
T ss_pred hhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHH
Confidence 35789999999999999999999974 48888763 555888888864 88886 99999999999999999999
Q ss_pred hcC
Q 044045 212 QTK 214 (215)
Q Consensus 212 ~~~ 214 (215)
+..
T Consensus 80 ~~~ 82 (93)
T 1dgw_Y 80 LEN 82 (93)
T ss_dssp TTS
T ss_pred Hhc
Confidence 753
No 101
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.80 E-value=1.4e-08 Score=82.87 Aligned_cols=70 Identities=19% Similarity=0.197 Sum_probs=60.9
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEE
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 170 (215)
..+..++++||+..+.|+|+ +.|+.||++|++. ++ ...+.+||++++|.|..|..++.+++.++++.+
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de-------~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DE-------TDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CS-------SSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CC-------cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 45678889999999999998 7899999999965 32 357999999999999999999987888998887
Q ss_pred Ec
Q 044045 171 LS 172 (215)
Q Consensus 171 ~~ 172 (215)
++
T Consensus 193 ~d 194 (195)
T 2q1z_B 193 TD 194 (195)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 102
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.80 E-value=4.6e-08 Score=78.12 Aligned_cols=67 Identities=19% Similarity=0.257 Sum_probs=55.3
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG 161 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 161 (215)
.+.++.+ -.|++...+|.|+ .+|++||++|++++.+.+. ++.....|++||++++|+|++|+-+..+
T Consensus 35 ~~~V~~v-~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~---g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 35 DFIVTVV-GGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD---GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SEEEEEE-CSCBCCCCEEECS-SCEEEEEEESCEEEEEEET---TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cEEEEEE-cCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC---CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 3444432 4677889999887 8999999999999999864 4456899999999999999999987755
No 103
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.78 E-value=2e-08 Score=79.58 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=68.1
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEc
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFP 150 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 150 (215)
.|.+++.+.... ..+..+.+++++||+..+.|.|+ +.|.+|||+|++.+. ++ ..++++||.++.|
T Consensus 27 ~Gv~~~~L~~d~-----~~g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~---e~------~~~~~~Gd~~~~P 91 (159)
T 3ebr_A 27 NDVMVKYFKIDP-----VRGETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRYK---EH------DWVAHAGSVVYET 91 (159)
T ss_dssp SSSEEEEEEEET-----TTTEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEET---TS------SCCBCTTCEEEEC
T ss_pred CCEEEEEeeEcC-----CCCeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEEe---CC------CeEECCCeEEEEC
Confidence 455565554221 12467888999999999999999 688899999998862 21 2489999999999
Q ss_pred CCCeEEEEeC--CCCcEEEEEEEc
Q 044045 151 IGLAHFQRNV--GHGNAFSISALS 172 (215)
Q Consensus 151 ~G~~H~~~N~--g~~~a~~l~~~~ 172 (215)
+|..|...+. +++.++++.+..
T Consensus 92 ~g~~H~~~~~~~~~e~~~~~~~~~ 115 (159)
T 3ebr_A 92 ASTRHTPQSAYAEGPDIITFNIVA 115 (159)
T ss_dssp SSEEECEEESSSSSSCEEEEEEEE
T ss_pred CCCcceeEeCCCCCCCEEEEEEec
Confidence 9999999998 778898887554
No 104
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.74 E-value=2.3e-07 Score=74.31 Aligned_cols=87 Identities=18% Similarity=0.186 Sum_probs=72.7
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCe---eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENR---LITKVLKKGDVFVFPIGLAHFQRNVGHGNAF 166 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~---~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~ 166 (215)
++++..+...||...++|-|..+..++.|++|+++..+....+ ++ ..+..+++||++++|++.+|.+.|.++++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~-~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG-EHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECS-SSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCC-CceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 5688999999999999999997788999999999987643221 31 1368899999999999999999999999999
Q ss_pred EEEEEcCCCCc
Q 044045 167 SISALSSQNPG 177 (215)
Q Consensus 167 ~l~~~~s~~pg 177 (215)
.+-++.....+
T Consensus 147 SlHvY~pp~~~ 157 (171)
T 3eqe_A 147 SLHVYSPPLED 157 (171)
T ss_dssp EEEEEESCCCC
T ss_pred EEEEeCCCccc
Confidence 99988765543
No 105
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.74 E-value=6.6e-08 Score=85.41 Aligned_cols=78 Identities=19% Similarity=0.154 Sum_probs=63.4
Q ss_pred CcCceEEEEEEEcC---CccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCC
Q 044045 87 NTLGASLARIDYAP---WGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHG 163 (215)
Q Consensus 87 ~~~gis~~~~~l~p---gg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 163 (215)
+...+++.++++.+ |+..+.|.|+ .+|++||++|++++++.+. + +++|++||++++|+|.+|.+.|.++.
T Consensus 245 ~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g~----~--~~~l~~Gd~~~iPag~~h~~~~~~~~ 317 (350)
T 1juh_A 245 QDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGDY----A--ATELGSGDVAFIPGGVEFKYYSEAYF 317 (350)
T ss_dssp GGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETTS----C--CEEECTTCEEEECTTCCEEEEESSSS
T ss_pred ceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECCe----E--EEEeCCCCEEEECCCCCEEEEecCCe
Confidence 43457888888888 3467788888 8999999999999999631 3 78999999999999999999998654
Q ss_pred cEEEEEEEc
Q 044045 164 NAFSISALS 172 (215)
Q Consensus 164 ~a~~l~~~~ 172 (215)
+.++.+.+
T Consensus 318 -~~~l~~~~ 325 (350)
T 1juh_A 318 -SKVLFVSS 325 (350)
T ss_dssp -EEEEEEEE
T ss_pred -EEEEEEec
Confidence 66665554
No 106
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.69 E-value=1.3e-08 Score=82.13 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=56.1
Q ss_pred CCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCce
Q 044045 104 IPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPGV 178 (215)
Q Consensus 104 ~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~ 178 (215)
.++|+|+ ..|+.||++|++.+.+. .+ ++.+...+++||++++|+|+.|++.+..+....++-.|... |+.
T Consensus 93 ~~~H~H~-~~Ei~~Vl~G~g~~~i~-~~--d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHG-EDEVRFFVEGAGLFCLH-IG--DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEES-SCEEEEEEESCCCCCEE-CS--SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECC-hheEEEEEcceEEEEEE-eC--CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 4789999 59999999999999885 22 55456779999999999999999988666667777666543 554
No 107
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.68 E-value=1.1e-08 Score=79.61 Aligned_cols=77 Identities=13% Similarity=-0.049 Sum_probs=58.6
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEE-EEeCCCCcEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHF-QRNVGHGNAFSI 168 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~-~~N~g~~~a~~l 168 (215)
|-.+.+++++||+..+.|+|+ ..|.+||++|+++.... ......++++||++++|+|..|. ..+ .+.++++
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~~g-----~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l 114 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVRGG-----KAAGGDTAIAPGYGYESANARHDKTEF--PVASEFY 114 (145)
T ss_dssp TEEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEETTC-----GGGTSEEEESSEEEEECTTCEESCCEE--EEEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEcCC-----CEecceEeCCCEEEEECcCCccCCeEC--CCCeEEE
Confidence 345778899999999999999 56669999999996422 12013799999999999999999 543 3456777
Q ss_pred EEEcCC
Q 044045 169 SALSSQ 174 (215)
Q Consensus 169 ~~~~s~ 174 (215)
.+++..
T Consensus 115 ~~~~gp 120 (145)
T 2o1q_A 115 MSFLGP 120 (145)
T ss_dssp EEEESC
T ss_pred EEECCc
Confidence 766543
No 108
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.65 E-value=4.1e-08 Score=78.26 Aligned_cols=74 Identities=24% Similarity=0.232 Sum_probs=60.2
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC--CCcEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG--HGNAFS 167 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~ 167 (215)
+..+.+++++||+..++|+|+ ..|.+|||+|++... . .. .+.+++||.++.|.|..|...+.. ++.|+.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~---~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~ 112 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---E---YP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEV 112 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---T---CT--TSCEETTEEEEECTTCEECEECCTTCSSCEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---C---Cc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEE
Confidence 466888999999999999999 789999999999862 1 11 367899999999999999999865 337766
Q ss_pred EEEEc
Q 044045 168 ISALS 172 (215)
Q Consensus 168 l~~~~ 172 (215)
+.+..
T Consensus 113 l~v~~ 117 (165)
T 3cjx_A 113 IFMLS 117 (165)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66544
No 109
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.61 E-value=9.3e-08 Score=76.79 Aligned_cols=82 Identities=17% Similarity=0.228 Sum_probs=61.6
Q ss_pred eEEEEEEEcCCccCCCccCCC------ccEEEEEEeCEEEEEEEecCCC--------Ce------eEEEEEcCCCEEEEc
Q 044045 91 ASLARIDYAPWGVIPPHVHPR------ATEILTVIEGSLDVGFVTSNPE--------NR------LITKVLKKGDVFVFP 150 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~------a~E~~~Vl~G~~~~~~~~~~~~--------~~------~~~~~L~~GDv~~~P 150 (215)
...-++.+.||...|.|.|+. -.|-++|+.|++++.+.+..-+ ++ -...+|++||.+.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 566778899999999999998 8899999999999888432100 00 024699999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEcCC
Q 044045 151 IGLAHFQRNVGHGNAFSISALSSQ 174 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~l~~~~s~ 174 (215)
+|+.|+++| +.+. +++.-+++.
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~ 154 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSST 154 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEEC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCC
Confidence 999999999 3333 444445443
No 110
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.53 E-value=1.6e-06 Score=71.37 Aligned_cols=83 Identities=18% Similarity=0.165 Sum_probs=68.4
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCee----EEEEEcCCCEEEEcC--CCeEEEEeC-CC
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRL----ITKVLKKGDVFVFPI--GLAHFQRNV-GH 162 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~----~~~~L~~GDv~~~P~--G~~H~~~N~-g~ 162 (215)
.+++..+...||...++|-|. ...+++|++|+++..+-....+++. .+.++++||+++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~-~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHT-VWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCC-cceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 477888999999999999999 4999999999998776432111221 268999999999999 999999999 68
Q ss_pred CcEEEEEEEcC
Q 044045 163 GNAFSISALSS 173 (215)
Q Consensus 163 ~~a~~l~~~~s 173 (215)
++++.+-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988854
No 111
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.52 E-value=5e-07 Score=72.07 Aligned_cols=59 Identities=20% Similarity=0.392 Sum_probs=50.4
Q ss_pred cCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC----eeEEEEEcCCCEEEEcCCCeEEEEeCC
Q 044045 99 APWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN----RLITKVLKKGDVFVFPIGLAHFQRNVG 161 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~----~~~~~~L~~GDv~~~P~G~~H~~~N~g 161 (215)
.|+....+|.|+ .+|++|+++|++.+.+.+. + +.....|++||++++|+|++|+-+...
T Consensus 42 GPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~---g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~ 104 (176)
T 1zvf_A 42 GPNERTDYHINP-TPEWFYQKKGSMLLKVVDE---TDAEPKFIDIIINEGDSYLLPGNVPHSPVRFA 104 (176)
T ss_dssp SSBCCSCEEECS-SCEEEEEEESCEEEEEEEC---SSSSCEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC---CCcccceeeEEECCCCEEEcCCCCCcCCcccC
Confidence 466778899666 8999999999999999874 4 456899999999999999999986653
No 112
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.52 E-value=9.9e-07 Score=78.48 Aligned_cols=87 Identities=17% Similarity=0.091 Sum_probs=68.4
Q ss_pred Cce-EEEeeccc-CCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEE
Q 044045 72 GSR-VTPVTVAQ-IPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVF 149 (215)
Q Consensus 72 g~~-~~~~~~~~-~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 149 (215)
|.. +.-++... -+.+.+ |.+....|+||...++|.|. ..++++|++|++++.++ ++ ++..++||++++
T Consensus 260 g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~-----~~--~~~w~~gD~fvv 329 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMN-----GE--TTKLEKGDMFVV 329 (368)
T ss_dssp TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEET-----TE--EEEECTTCEEEE
T ss_pred ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEEC-----CE--EEEecCCCEEEE
Confidence 555 55555432 233444 45555669999999999999 78999999999999985 44 899999999999
Q ss_pred cCCCeEEEEeCCCCcEEEEEE
Q 044045 150 PIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~l~~ 170 (215)
|++..|...|. +++.++.+
T Consensus 330 P~w~~h~~~n~--~~a~Lf~~ 348 (368)
T 3nw4_A 330 PSWVPWSLQAE--TQFDLFRF 348 (368)
T ss_dssp CTTCCEEEEES--SSEEEEEE
T ss_pred CCCCcEEEEeC--CCEEEEEE
Confidence 99999999996 57777764
No 113
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.48 E-value=7e-07 Score=77.94 Aligned_cols=77 Identities=21% Similarity=0.226 Sum_probs=63.6
Q ss_pred EEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcC-C---CEEEEcCCCeEEEEeCCCCcEEE
Q 044045 92 SLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKK-G---DVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 92 s~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~-G---Dv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
.....+..||....+|||....|.++|++|++.+.+.+... ++ ...++. | +.+++|+|..|.+.|.|++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~ 349 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVND-DE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVT 349 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTC-CC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCC-Cc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEE
Confidence 34556789999999999998999999999999998875432 45 455555 6 99999999999999999889988
Q ss_pred EEEE
Q 044045 168 ISAL 171 (215)
Q Consensus 168 l~~~ 171 (215)
+..-
T Consensus 350 ~~~~ 353 (369)
T 3st7_A 350 IMWV 353 (369)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8654
No 114
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.47 E-value=1.3e-06 Score=67.11 Aligned_cols=58 Identities=21% Similarity=0.179 Sum_probs=49.3
Q ss_pred CCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC-CcEEEEEE
Q 044045 105 PPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH-GNAFSISA 170 (215)
Q Consensus 105 ~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~-~~a~~l~~ 170 (215)
.||.|+ .-|++||++|++++.+. ++ ++.+++||++++|+|.+|.+.+.++ ++...+++
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i~-----~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKNQ-----GR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEEC-----CE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 489898 79999999999999885 44 8999999999999999999998763 55665554
No 115
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.45 E-value=4.9e-07 Score=69.74 Aligned_cols=76 Identities=12% Similarity=0.185 Sum_probs=56.0
Q ss_pred EEEEEEcC----CccCCCccCCCccEEEEEEeCEEEEEEEecC-CCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 93 LARIDYAP----WGVIPPHVHPRATEILTVIEGSLDVGFVTSN-PENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 93 ~~~~~l~p----gg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~-~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
++...+.| +++..+|.|+..+|+++|++|++++.+.+.. +..+-....|++|+++++|+|+-|...... .+.+
T Consensus 27 Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--e~~v 104 (140)
T 3d0j_A 27 VCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK--DTKM 104 (140)
T ss_dssp EEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT--TCEE
T ss_pred EEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC--ceEE
Confidence 44444444 4566789999999999999999999987421 001123789999999999999999998854 4455
Q ss_pred EEE
Q 044045 168 ISA 170 (215)
Q Consensus 168 l~~ 170 (215)
+.+
T Consensus 105 LLi 107 (140)
T 3d0j_A 105 MYV 107 (140)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.39 E-value=1.2e-06 Score=72.79 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=65.0
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEc
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFP 150 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 150 (215)
.|...+.+....- ..+..+.+++++||+..+.|+|+ +.|.+|||+|++. ++ ...+.+||.++.|
T Consensus 27 ~Gv~~~~L~~~~~----e~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-------~~~~~~Gd~~~~P 90 (223)
T 3o14_A 27 KGVERRMLDRIGG----EVARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-------HGDYPAGTYVRNP 90 (223)
T ss_dssp TTEEEEEEEEESS----SSCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-------TEEEETTEEEEEC
T ss_pred CCEEEEEeecCCC----ccccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-------CeEECCCeEEEeC
Confidence 4555555543221 12456778899999999999999 7889999999976 22 3689999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEcC
Q 044045 151 IGLAHFQRNVGHGNAFSISALSS 173 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~l~~~~s 173 (215)
+|..|.... ++.|.++..+..
T Consensus 91 ~g~~H~p~a--~~gc~~~vk~~~ 111 (223)
T 3o14_A 91 PTTSHVPGS--AEGCTIFVKLWQ 111 (223)
T ss_dssp TTCEECCEE--SSCEEEEEEESC
T ss_pred CCCccccEe--CCCCEEEEEecC
Confidence 999999886 566888877643
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.33 E-value=5.9e-07 Score=70.64 Aligned_cols=89 Identities=10% Similarity=-0.005 Sum_probs=64.2
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEc
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFP 150 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 150 (215)
.|..++.+... | ..|-...+++++||+..++|+|+ +.|.+|||+|++..+..+- .. ...+++|+.++-|
T Consensus 31 ~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~Gd~---~~--~~~~~aGsYv~eP 99 (153)
T 3bal_A 31 GGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGGEQ---EG--GSTAYAPSYGFES 99 (153)
T ss_dssp SCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTCGG---GT--SEEEESSEEEEEC
T ss_pred CCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCccc---cC--ccccCCCeEEEcC
Confidence 46666666322 2 24778899999999999999999 7888999999998753221 01 4788999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEE
Q 044045 151 IGLAHFQRNVGHGNAFSISAL 171 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~l~~~ 171 (215)
+|..|...-. ++..+++...
T Consensus 100 pGs~H~p~~~-~~~~~~~~~~ 119 (153)
T 3bal_A 100 SGALHGKTFF-PVESQFYMTF 119 (153)
T ss_dssp TTCEESCCEE-SSCEEEEEEE
T ss_pred CCCcccceeC-CCCeEEEEEE
Confidence 9999984332 2334444433
No 118
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.32 E-value=1.7e-05 Score=64.89 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=71.4
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC-----eeEEEEEcCCCEEEE-cCCCeEEEEeCC-C
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN-----RLITKVLKKGDVFVF-PIGLAHFQRNVG-H 162 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~-----~~~~~~L~~GDv~~~-P~G~~H~~~N~g-~ 162 (215)
.+++..+...||...++|-|.++..+++|++|+++-.......++ ...+.++++||+.++ |.+-+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 477888999999999999999889999999999998764321101 123689999999999 888899999999 7
Q ss_pred CcEEEEEEEcCCCCc
Q 044045 163 GNAFSISALSSQNPG 177 (215)
Q Consensus 163 ~~a~~l~~~~s~~pg 177 (215)
++++-|=++.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899988888766554
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.32 E-value=2.3e-06 Score=73.08 Aligned_cols=60 Identities=17% Similarity=0.370 Sum_probs=51.5
Q ss_pred cCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC
Q 044045 99 APWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH 162 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 162 (215)
.|+....+| |...+|++|+++|.+.+.+.+. ++.....+++||++++|+|++|.-+...+
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~---g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ---GKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET---TEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC---CceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 455567889 8889999999999999999875 56668999999999999999999887543
No 120
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.05 E-value=0.00013 Score=60.17 Aligned_cols=85 Identities=16% Similarity=0.157 Sum_probs=67.9
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeE----EEEEcCCCEEEEcCC--CeEEEEeCC-C
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLI----TKVLKKGDVFVFPIG--LAHFQRNVG-H 162 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~----~~~L~~GDv~~~P~G--~~H~~~N~g-~ 162 (215)
.+++..+...||...++|=|. +.-++.|++|+++-.+-....+++.. ..++++||+.+|..+ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 467888999999999999999 89999999999987664321112211 478999999999987 899999984 7
Q ss_pred CcEEEEEEEcCCC
Q 044045 163 GNAFSISALSSQN 175 (215)
Q Consensus 163 ~~a~~l~~~~s~~ 175 (215)
++++-|=++....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8888887776443
No 121
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.03 E-value=4.9e-05 Score=63.72 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=55.4
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
++++..+.+ .|..... .++ .+|++||++|++++... ++ ..++++||+++||+|..|.+...+... .+++
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~~-----g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~~-~~y~ 114 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTSG-----TD--SVTLSTGESAVIGRGTQVRIDAQPESL-WAFC 114 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEECTTEE-EEEE
T ss_pred CeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEECC-----Ce--EEEEcCCCEEEECCCCEEEEEecCCeE-EEEE
Confidence 678888888 5554332 244 48999999999999862 44 899999999999999999999876653 3444
Q ss_pred EEc
Q 044045 170 ALS 172 (215)
Q Consensus 170 ~~~ 172 (215)
.+.
T Consensus 115 ~~~ 117 (238)
T 3myx_A 115 AST 117 (238)
T ss_dssp EEC
T ss_pred ecc
Confidence 555
No 122
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.91 E-value=4.7e-05 Score=57.03 Aligned_cols=64 Identities=13% Similarity=0.019 Sum_probs=49.1
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH 162 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 162 (215)
..+......||...- +++. .+|++|||+|++++...+ +. ..++++||+++||+|....+.-...
T Consensus 42 ~~~GvWe~tPG~~~~-~~~~-~~E~~~iLeG~~~lt~dd----G~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 42 TIVAVWMAEPGIYNY-AGRD-LEETFVVVEGEALYSQAD----AD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp CEEEEEEECSEEEEE-CCCS-EEEEEEEEECCEEEEETT----CC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEEEEecCCceeEC-eeCC-CcEEEEEEEeEEEEEeCC----Ce--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 455666889986542 3333 359999999999998742 33 6899999999999999999877544
No 123
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.89 E-value=0.00023 Score=55.04 Aligned_cols=94 Identities=13% Similarity=0.051 Sum_probs=65.8
Q ss_pred CceEEEeec-ccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCC-CEEEE
Q 044045 72 GSRVTPVTV-AQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKG-DVFVF 149 (215)
Q Consensus 72 g~~~~~~~~-~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~G-Dv~~~ 149 (215)
.++++.+-. ...|- .-.. .+....++||....+|.|....|++++++|++.+.+.+. ....+..|... ..+.|
T Consensus 17 RG~L~~~e~~~~ipf-~ikR-vy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg---~~~~~~~L~~~~~gL~I 91 (141)
T 2pa7_A 17 RGSLVAIEENKNIPF-SIKR-VYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG---NIIQEITLDSPAVGLYV 91 (141)
T ss_dssp TEEEEEEETTTTSSS-CCCE-EEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS---SCEEEEEECCTTEEEEE
T ss_pred CCcEEEEeccCCCCC-CccE-EEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC---cEEEEEEECCCCcEEEe
Confidence 445666665 34443 1111 122233568888999999999999999999999999643 23346677554 45999
Q ss_pred cCCCeEEEEeCCCCcEEEEEEE
Q 044045 150 PIGLAHFQRNVGHGNAFSISAL 171 (215)
Q Consensus 150 P~G~~H~~~N~g~~~a~~l~~~ 171 (215)
|+|+-|.+.+.+.+ ++++..-
T Consensus 92 ppgvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 92 GPAVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp CTTCEEEEECCCTT-CEEEEEE
T ss_pred CCCEEEEEEEcCCC-eEEEEEC
Confidence 99999999999875 6666543
No 124
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.82 E-value=0.00024 Score=56.84 Aligned_cols=76 Identities=17% Similarity=0.148 Sum_probs=61.3
Q ss_pred EEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCC----CeeEEEEEc---CCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 97 DYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPE----NRLITKVLK---KGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 97 ~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~----~~~~~~~L~---~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
...+|....+|+|....++++|++|++...+++...+ ++.....|. ....++||+|..|.+.+.++++++++.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 3578888999999878999999999999988864321 345678887 568999999999999999987777665
Q ss_pred EEc
Q 044045 170 ALS 172 (215)
Q Consensus 170 ~~~ 172 (215)
..+
T Consensus 139 ~~s 141 (174)
T 3ejk_A 139 CTD 141 (174)
T ss_dssp EES
T ss_pred ECC
Confidence 443
No 125
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.65 E-value=0.00026 Score=59.36 Aligned_cols=64 Identities=20% Similarity=0.337 Sum_probs=51.4
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG 161 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g 161 (215)
.++.......||...+.+ |. .+|+.|||+|++++... + ++ ..++++||+++||+|..-.+.-..
T Consensus 166 ~~~~GiW~~tpG~~~~~~-~~-~~E~~~ILeG~v~lt~~--~--G~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRP-HK-IHELMNLIEGRVVLSLE--N--GS--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp SCEEEEEEECCEEBCCEE-CS-SCEEEEEEECCEEEEET--T--SC--EEEECTTCEEEECTTCEEEEEESS
T ss_pred CEEEeEEEeCCCEEECCc-CC-CCEEEEEEEeEEEEEeC--C--CC--EEEECCCCEEEECCCCEEEEEECc
Confidence 577888889998855433 23 68999999999999753 2 44 799999999999999998887764
No 126
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.48 E-value=0.0034 Score=49.90 Aligned_cols=133 Identities=17% Similarity=0.136 Sum_probs=88.8
Q ss_pred CCCCceEEEeecccCC-CCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCE-EEEEEEecCCCCeeEEEE----Ec
Q 044045 69 NPLGSRVTPVTVAQIP-GLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGS-LDVGFVTSNPENRLITKV----LK 142 (215)
Q Consensus 69 ~~~g~~~~~~~~~~~P-~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~-~~~~~~~~~~~~~~~~~~----L~ 142 (215)
.+.|+..++.....-+ +-.....+....-|.+|....+|... ++|+.+...|. +++.+..++ ++..+.+ +.
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~d--g~~~~~~LG~dv~ 102 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPE--GELTTAQLGLDLA 102 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTT--SCEEEEEESSCTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCC--CCEEEEEeCCCcc
Confidence 4677878777766411 11112345666668899877777776 99999999998 588887665 4544555 56
Q ss_pred CCCE--EEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHhhhc
Q 044045 143 KGDV--FVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQLQT 213 (215)
Q Consensus 143 ~GDv--~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 213 (215)
+|+. ++||+|.-+..++.+.+-+.+-++. .||+..-...+ .+.+-|.+.|.--++.|++|..
T Consensus 103 ~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt~ 166 (170)
T 1yud_A 103 AGERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDDFEL------FSQEALLAMYPQHKAVVQKLSR 166 (170)
T ss_dssp TTEESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGGCCB------CBHHHHHHSCCTTHHHHTTSCB
T ss_pred cCceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCceEE------cCHHHHHhHCchhHHHHHHhhh
Confidence 7899 9999999999999832444333433 36654332222 3566777778877888888753
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.33 E-value=0.001 Score=55.41 Aligned_cols=73 Identities=5% Similarity=-0.024 Sum_probs=53.9
Q ss_pred ceEEEEEEEcCCc--cCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeC--CCCcE
Q 044045 90 GASLARIDYAPWG--VIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNV--GHGNA 165 (215)
Q Consensus 90 gis~~~~~l~pgg--~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~--g~~~a 165 (215)
++-+....+.... ..++|||. .-|++||++|++. .+.+ .....+.+++||++++|+|.+|.+... ++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~----~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~ 79 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDK----NCLVSYEINSSSIILLKKNSIQRFSLTSLSDENI 79 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEET----TTTEEEEECTTEEEEECTTCEEEEEEEECCSSCE
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECC----ccceeEEEcCCCEEEEcCCCceeeccccCCCcce
Confidence 4555666666654 34689998 7999999999999 7753 211258999999999999999998765 33444
Q ss_pred EEE
Q 044045 166 FSI 168 (215)
Q Consensus 166 ~~l 168 (215)
..+
T Consensus 80 ~~~ 82 (276)
T 3gbg_A 80 NVS 82 (276)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.24 E-value=0.00042 Score=57.41 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=59.7
Q ss_pred CCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEc
Q 044045 71 LGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFP 150 (215)
Q Consensus 71 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P 150 (215)
.|.++..+..... -.+..++++||...++|.| ++.|+ +||+|++. ++ ..++.+|+.+..|
T Consensus 133 ~Gv~~~~L~~~~~-------E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-------~~~~~~GsWlR~P 192 (223)
T 3o14_A 133 EGISTSLLHEDER-------ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-------DEVLGRNAWLRLP 192 (223)
T ss_dssp TTEEEEEEEECSS-------CEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-------TEEECTTEEEEEC
T ss_pred CCeEEEEEecCCC-------cEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-------CceECCCeEEEeC
Confidence 4555666655441 2345677899999999999 68996 99999976 22 3689999999999
Q ss_pred CCCeEEEEeCCCCcEEEEE
Q 044045 151 IGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~l~ 169 (215)
.|..|.... |++.|.++.
T Consensus 193 ~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 193 EGEALSATA-GARGAKIWM 210 (223)
T ss_dssp TTCCEEEEE-EEEEEEEEE
T ss_pred CCCccCcEE-CCCCeEEEE
Confidence 999999987 666676553
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.22 E-value=0.0025 Score=53.86 Aligned_cols=71 Identities=14% Similarity=0.281 Sum_probs=55.5
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcC--CCeEEEEeCCC-CcEEEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPI--GLAHFQRNVGH-GNAFSIS 169 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~--G~~H~~~N~g~-~~a~~l~ 169 (215)
+....+.||.-.++|-|.+-+.+.||++|+++.. |+. +. ..++++||+-+.-+ |+.|...|..+ +++.++-
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~--Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQ 139 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSE--GN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQ 139 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETT--SC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCC--CC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEE
Confidence 4456789998889999995455789999999875 443 23 68999999999955 58999999764 6777664
No 130
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.96 E-value=0.005 Score=51.25 Aligned_cols=78 Identities=22% Similarity=0.180 Sum_probs=56.1
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEeC-EE--EEEEEecCC-----------CCeeE------EEEEcCCCEEEEc
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIEG-SL--DVGFVTSNP-----------ENRLI------TKVLKKGDVFVFP 150 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G-~~--~~~~~~~~~-----------~~~~~------~~~L~~GDv~~~P 150 (215)
..--.+.+.||...|.|.|+.-.|-++..-| .+ ++...++++ +++.+ ..+|+||+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4445567899999999999989999999988 44 443333221 12212 4589999999999
Q ss_pred CCCeEEEEeCCC-CcEEEE
Q 044045 151 IGLAHFQRNVGH-GNAFSI 168 (215)
Q Consensus 151 ~G~~H~~~N~g~-~~a~~l 168 (215)
+|+-|+++..+. .++.+-
T Consensus 186 Pg~~H~F~ae~g~G~vlig 204 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLVG 204 (246)
T ss_dssp TTEEEEEEECTTSCCEEEE
T ss_pred CCCEEEEEecCCCccEEEE
Confidence 999999998765 244443
No 131
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.88 E-value=0.0059 Score=51.06 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=55.2
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEc--CCCeEEEEeCCC-CcEEEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFP--IGLAHFQRNVGH-GNAFSIS 169 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P--~G~~H~~~N~g~-~~a~~l~ 169 (215)
+....+.||.-.++|-|.+-+.+.||++|+++.. |+. +. ..++++||+-+.- +|+.|...|..+ ++..++-
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~--Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQ 116 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSM--GN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQ 116 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESS--SC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCC--CC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEE
Confidence 3456688998889999996566899999998875 443 23 6899999999995 558999999764 6676663
No 132
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.76 E-value=0.015 Score=46.77 Aligned_cols=70 Identities=16% Similarity=0.079 Sum_probs=53.6
Q ss_pred cCCccCCCccC--CCccEEEEEEeCEEEEEEEecC-CC---CeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 99 APWGVIPPHVH--PRATEILTVIEGSLDVGFVTSN-PE---NRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~~pH~H--p~a~E~~~Vl~G~~~~~~~~~~-~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+|.+...|+| ....++++|++|++.--+++-. ++ ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNY 133 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 37888899999 6679999999999754444432 11 3566788865 68999999999999999876 55553
No 133
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.74 E-value=0.011 Score=48.21 Aligned_cols=69 Identities=14% Similarity=0.166 Sum_probs=53.2
Q ss_pred cCCccCCCccCC---CccEEEEEEeCEEEEEEEecC-CC---CeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 99 APWGVIPPHVHP---RATEILTVIEGSLDVGFVTSN-PE---NRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 99 ~pgg~~~pH~Hp---~a~E~~~Vl~G~~~~~~~~~~-~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.+|.+..+|+|. ...++++|++|++.--+++-. +. ++.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 678889999995 368999999999765555432 11 4556788875 79999999999999999875 5444
No 134
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.69 E-value=0.024 Score=45.44 Aligned_cols=70 Identities=14% Similarity=0.012 Sum_probs=53.3
Q ss_pred cCCccCCCccC--CCccEEEEEEeCEEEEEEEec-CCC---CeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 99 APWGVIPPHVH--PRATEILTVIEGSLDVGFVTS-NPE---NRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~~pH~H--p~a~E~~~Vl~G~~~~~~~~~-~~~---~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+|.+...|+| .....+++|++|++.--+++- .+. ++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 134 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLY 134 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEE
Confidence 47888899999 657899999999975444443 211 3566788865 58999999999999999876 55553
No 135
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.69 E-value=0.014 Score=44.04 Aligned_cols=68 Identities=19% Similarity=0.258 Sum_probs=52.9
Q ss_pred cCCccCCCc----cCCCccEEEEEEeCEEEEEEEecCCCC-e-eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 99 APWGVIPPH----VHPRATEILTVIEGSLDVGFVTSNPEN-R-LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 99 ~pgg~~~pH----~Hp~a~E~~~Vl~G~~~~~~~~~~~~~-~-~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.|+++.+.| +|++.-+.+.|++|++++.+.++++ + . .......+|+..+||++..|.+....+ ++.+-
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g-~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~ 95 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEH-SAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFN 95 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTT-CSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCC-CcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEE
Confidence 467778899 4998889999999999998655543 2 1 235678999999999999999998665 55553
No 136
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.68 E-value=0.02 Score=45.86 Aligned_cols=69 Identities=14% Similarity=0.030 Sum_probs=52.6
Q ss_pred cCCccCCCccCC---CccEEEEEEeCEEEEEEEecCCC----CeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 99 APWGVIPPHVHP---RATEILTVIEGSLDVGFVTSNPE----NRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 99 ~pgg~~~pH~Hp---~a~E~~~Vl~G~~~~~~~~~~~~----~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.+|.+...|+|. ....+++|++|++.--+++-..+ ++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFL 132 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 478888999995 57899999999975444443211 3456788865 58999999999999999876 5444
No 137
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.66 E-value=0.02 Score=46.47 Aligned_cols=70 Identities=16% Similarity=0.073 Sum_probs=52.8
Q ss_pred EcCCccCCCccCCC---ccEEEEEEeCEEEEEEEecCC----CCeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 98 YAPWGVIPPHVHPR---ATEILTVIEGSLDVGFVTSNP----ENRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 98 l~pgg~~~pH~Hp~---a~E~~~Vl~G~~~~~~~~~~~----~~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
-.+|.+...|+|.. ..++++|++|++..-+++-.. -++.....|.+ +..++||+|..|.+.+.++. ++++
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 35788888999964 589999999999554444321 13456788875 79999999999999999874 5444
No 138
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.53 E-value=0.022 Score=49.84 Aligned_cols=73 Identities=21% Similarity=0.205 Sum_probs=53.8
Q ss_pred EEEcC-CccCCCccCCCccEEEEEEeCEEEEEEE-ecCC-------------------------------CCeeEEEEEc
Q 044045 96 IDYAP-WGVIPPHVHPRATEILTVIEGSLDVGFV-TSNP-------------------------------ENRLITKVLK 142 (215)
Q Consensus 96 ~~l~p-gg~~~pH~Hp~a~E~~~Vl~G~~~~~~~-~~~~-------------------------------~~~~~~~~L~ 142 (215)
+-+.| |+..++|+.+ ..-++..+.|+=++.+. .+.. .....+.+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 33555 7788999987 57888889999888777 3210 0113578999
Q ss_pred CCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 143 KGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
+||++++|+|..|+..+.+++...-++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvs 250 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNIT 250 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEE
Confidence 999999999999999998654554443
No 139
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.50 E-value=0.0082 Score=48.44 Aligned_cols=66 Identities=17% Similarity=0.405 Sum_probs=48.9
Q ss_pred EEEcCC-ccCCCccCCCccEEEEEEeCEEEEEEEecCC--------------------------------CCeeEEEEEc
Q 044045 96 IDYAPW-GVIPPHVHPRATEILTVIEGSLDVGFVTSNP--------------------------------ENRLITKVLK 142 (215)
Q Consensus 96 ~~l~pg-g~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~--------------------------------~~~~~~~~L~ 142 (215)
+-+.++ +..++|+.+ ..-++.+++|+=++.+..+.. +.+..+.+|+
T Consensus 128 ~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 206 (235)
T 4gjz_A 128 AWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILS 206 (235)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEEC
T ss_pred EEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEEC
Confidence 335554 456678766 567888999999888864420 0123578999
Q ss_pred CCCEEEEcCCCeEEEEeCCC
Q 044045 143 KGDVFVFPIGLAHFQRNVGH 162 (215)
Q Consensus 143 ~GDv~~~P~G~~H~~~N~g~ 162 (215)
+||+++||+|..|..+|.+.
T Consensus 207 pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 207 PGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp TTCEEEECTTCEEEEEESSS
T ss_pred CCCEEEeCCCCcEEEEECCC
Confidence 99999999999999999864
No 140
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.41 E-value=0.038 Score=45.04 Aligned_cols=70 Identities=9% Similarity=0.010 Sum_probs=52.9
Q ss_pred cCCccCCCccCCC---ccEEEEEEeCEEEEEEEecCC----CCeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 99 APWGVIPPHVHPR---ATEILTVIEGSLDVGFVTSNP----ENRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 99 ~pgg~~~pH~Hp~---a~E~~~Vl~G~~~~~~~~~~~----~~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.+|.+..+|+|.. ...+++|++|++.--+++-.. -++.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788888999964 589999999998655554321 13456788876 58999999999999999877 54443
No 141
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.37 E-value=0.019 Score=46.54 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=55.3
Q ss_pred EcCCccCCCccCCCccEEEEEEe-CEEEEEEEecCCC---CeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 044045 98 YAPWGVIPPHVHPRATEILTVIE-GSLDVGFVTSNPE---NRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL 171 (215)
Q Consensus 98 l~pgg~~~pH~Hp~a~E~~~Vl~-G~~~~~~~~~~~~---~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 171 (215)
-.+|.+..+|.|+ ..++++|++ |++..-+++-.++ ++.....|..+..++||+|..|.+.+.++. ++++...
T Consensus 67 s~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 142 (197)
T 1nxm_A 67 SRKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLV 142 (197)
T ss_dssp EETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEE
T ss_pred CCCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEEC
Confidence 3678888999996 789999999 9975444443211 356788999999999999999999999865 5555333
No 142
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.35 E-value=0.036 Score=45.55 Aligned_cols=69 Identities=13% Similarity=-0.022 Sum_probs=51.9
Q ss_pred cCCccCCCccCCC---ccEEEEEEeCEEEEEEEecCC----CCeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 99 APWGVIPPHVHPR---ATEILTVIEGSLDVGFVTSNP----ENRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 99 ~pgg~~~pH~Hp~---a~E~~~Vl~G~~~~~~~~~~~----~~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.+|-+...|+|.. ..++++|++|++.--+++-.. -++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~l 140 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLC 140 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEE
Confidence 4788889999964 589999999997544444321 13456788876 48999999999999999876 4444
No 143
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.26 E-value=0.06 Score=44.52 Aligned_cols=69 Identities=16% Similarity=0.064 Sum_probs=52.1
Q ss_pred cCCccCCCccCCC---ccEEEEEEeCEEEEEEEecCC----CCeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 99 APWGVIPPHVHPR---ATEILTVIEGSLDVGFVTSNP----ENRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 99 ~pgg~~~pH~Hp~---a~E~~~Vl~G~~~~~~~~~~~----~~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.+|.+...|+|.. ...+++|++|++.--+++-.. -++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vl 151 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVM 151 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEE
Confidence 5788888999964 589999999997544444321 13456788866 58999999999999999877 4444
No 144
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.25 E-value=0.039 Score=46.55 Aligned_cols=86 Identities=22% Similarity=0.214 Sum_probs=65.5
Q ss_pred CCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 69 NPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 69 ~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
|...++.+.++. .+-|-+-.++.++|+--.|+-.|.--.| +||++|++.++ ...|.+|...+
T Consensus 75 ~~~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----------~~~l~~h~Y~f 136 (303)
T 2qdr_A 75 NIAPGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----------EWQLNKHSYSF 136 (303)
T ss_dssp TSCCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----------TEEECTTEEEE
T ss_pred CcCccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----------CEEecCCceEE
Confidence 445555666654 2347888999999998888877664577 99999999873 36899999999
Q ss_pred EcCCCeE-EEEeCCCCcEEEEEEEc
Q 044045 149 FPIGLAH-FQRNVGHGNAFSISALS 172 (215)
Q Consensus 149 ~P~G~~H-~~~N~g~~~a~~l~~~~ 172 (215)
+|+|+.- .++-.|.+++.++..-+
T Consensus 137 ~PaGV~~~~~kv~~~~g~~iL~fe~ 161 (303)
T 2qdr_A 137 IPAGVRIGSWKVLGGEEAEILWMEN 161 (303)
T ss_dssp ECTTCCBCCEEEETTSCEEEEEEEC
T ss_pred ecCCCccCceeecCCCCcEEEEEec
Confidence 9999854 34556888888887733
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.12 E-value=0.067 Score=43.45 Aligned_cols=69 Identities=9% Similarity=-0.049 Sum_probs=53.3
Q ss_pred cCCccCCCccCC---CccEEEEEEeCEEEEEEEecCC----CCeeEEEEEcC--CCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 99 APWGVIPPHVHP---RATEILTVIEGSLDVGFVTSNP----ENRLITKVLKK--GDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 99 ~pgg~~~pH~Hp---~a~E~~~Vl~G~~~~~~~~~~~----~~~~~~~~L~~--GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
.+|.+..+|+|. ....+++|++|++.--+++-.. =++.....|.+ +..++||+|..|.+.+.+++ +.++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~ 129 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLV 129 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEE
Confidence 578888999984 5799999999998766665321 14556777865 78999999999999999876 4443
No 146
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.95 E-value=0.037 Score=48.41 Aligned_cols=74 Identities=16% Similarity=0.211 Sum_probs=54.5
Q ss_pred EEEc-CCccCCCccCCCccEEEEEEeCEEEEEEEecCC------------------------C---------CeeEEEEE
Q 044045 96 IDYA-PWGVIPPHVHPRATEILTVIEGSLDVGFVTSNP------------------------E---------NRLITKVL 141 (215)
Q Consensus 96 ~~l~-pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~------------------------~---------~~~~~~~L 141 (215)
+-+. +|+..++|+.+ ..-+..+++|+=++.+..+.. + .+.++.+|
T Consensus 187 l~iG~~gs~t~~H~D~-~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGE-QQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCS-EEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECC-hhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4455 45677899877 478889999998887764320 0 14578999
Q ss_pred cCCCEEEEcCCCeEEEEeCCC-CcEEEEEE
Q 044045 142 KKGDVFVFPIGLAHFQRNVGH-GNAFSISA 170 (215)
Q Consensus 142 ~~GDv~~~P~G~~H~~~N~g~-~~a~~l~~ 170 (215)
++||++++|+|..|...|.++ .....+..
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 999999999999999999873 44555543
No 147
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.74 E-value=0.04 Score=50.05 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=44.3
Q ss_pred CccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 106 PHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 106 pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.-.+.+++|++++-+|++.+.-.- | ...+++||+++||+|+.+.+.-.+ +++.+.
T Consensus 172 ~f~NaDGD~Livpq~G~l~i~TEf----G---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 172 CFYNSDGDFLIVPQKGNLLIYTEF----G---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp EEEESSEEEEEEEEESCEEEEETT----E---EEEECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred eeecCCCCEEEEEEeCCEEEEEec----c---cEEeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 445777999999999999987542 2 588999999999999999997765 665553
No 148
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.64 E-value=0.038 Score=47.09 Aligned_cols=57 Identities=18% Similarity=0.060 Sum_probs=43.0
Q ss_pred EcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCC
Q 044045 98 YAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHG 163 (215)
Q Consensus 98 l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 163 (215)
+.+|.....-. ..+-++++++|+..+.+. ++ ++.|++||++.||++..|.+.-..+.
T Consensus 214 ~G~Ges~~~~~--~~d~wiWqLEGss~Vt~~-----~q--~~~L~~~DsLLIpa~~~y~~~r~~gs 270 (286)
T 2qnk_A 214 YGQGSSEGLRQ--NVDVWLWQLEGSSVVTMG-----GR--RLSLAPDDSLLVLAGTSYAWERTQGS 270 (286)
T ss_dssp ECSEEEEECCC--SSCEEEEEEESCEEEEET-----TE--EEEECTTEEEEECTTCCEEEEECTTC
T ss_pred EcCCccccccC--cCcEEEEEEcCceEEEEC-----Ce--EEeccCCCEEEecCCCeEEEEecCCe
Confidence 66665432211 126789999999988875 44 89999999999999999999775443
No 149
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.33 E-value=0.13 Score=43.61 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=58.8
Q ss_pred EEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCC--CeEEEEeCCCCcEEEEE--E-E
Q 044045 97 DYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIG--LAHFQRNVGHGNAFSIS--A-L 171 (215)
Q Consensus 97 ~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G--~~H~~~N~g~~~a~~l~--~-~ 171 (215)
...++.-.++|-|.+-+-+.||++|+++.. |+. +. ..++++||+=+.-+| +.|.-.|..+++...+- + +
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~--Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvnL 118 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSK--AG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVNL 118 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETT--TE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCC--CC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEeeC
Confidence 567888899999994444799999998875 444 33 689999999988875 78999998777777663 2 2
Q ss_pred cC----CCCceeeec
Q 044045 172 SS----QNPGVITIA 182 (215)
Q Consensus 172 ~s----~~pg~~~~~ 182 (215)
.. ..|..+.+.
T Consensus 119 P~~~k~~~P~y~~~~ 133 (277)
T 2p17_A 119 PSAYKMTEPRYQNLR 133 (277)
T ss_dssp CGGGTTCCCEEEEEC
T ss_pred ChhhcCCCCcceeec
Confidence 22 136666654
No 150
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.27 E-value=0.06 Score=46.80 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=51.5
Q ss_pred EEEc-CCccCCCccCCCccEEEEEEeCEEEEEEEecC-------------------CC---------CeeEEEEEcCCCE
Q 044045 96 IDYA-PWGVIPPHVHPRATEILTVIEGSLDVGFVTSN-------------------PE---------NRLITKVLKKGDV 146 (215)
Q Consensus 96 ~~l~-pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~-------------------~~---------~~~~~~~L~~GDv 146 (215)
+-+. +|+..++|+.+ ..-++.+++|+=++.+..+. .+ .+..+.+|++||+
T Consensus 171 l~~g~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 171 FRISSPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eEECCCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 3344 45567789877 46778889999888776431 00 1246899999999
Q ss_pred EEEcCCCeEEEEeCCCCcEEEEE
Q 044045 147 FVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 147 ~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
+++|+|..|...|.+. ...+.
T Consensus 250 LyiP~gWwH~v~~l~~--sisvn 270 (338)
T 3al5_A 250 LFIPALWFHNVISEEF--GVGVN 270 (338)
T ss_dssp EEECTTCEEEEEESSC--EEEEE
T ss_pred EEECCCCeEEEeeCCC--EEEEE
Confidence 9999999999999854 44444
No 151
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.26 E-value=0.024 Score=48.65 Aligned_cols=70 Identities=16% Similarity=0.240 Sum_probs=48.2
Q ss_pred eEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecC-C------CCeeEEEEEcCCCEEEEcCCCeEEEEeCCCC
Q 044045 91 ASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSN-P------ENRLITKVLKKGDVFVFPIGLAHFQRNVGHG 163 (215)
Q Consensus 91 is~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~-~------~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~ 163 (215)
+.++|+.+.||+.+.+|.=+ .|+....+|.+++.+.-.. + +++ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47788899999999998544 3544455677666554221 1 144 78999999999999999999999985
Q ss_pred c
Q 044045 164 N 164 (215)
Q Consensus 164 ~ 164 (215)
+
T Consensus 167 ~ 167 (290)
T 1e5r_A 167 S 167 (290)
T ss_dssp C
T ss_pred C
Confidence 4
No 152
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.03 E-value=0.2 Score=45.31 Aligned_cols=64 Identities=23% Similarity=0.373 Sum_probs=47.7
Q ss_pred EEcCCc-c-CCCccCCCccEEEEEEeCEEEEEEEecCC--------------CCeeEEEEEcCCCEEEEcCCCeEEEEeC
Q 044045 97 DYAPWG-V-IPPHVHPRATEILTVIEGSLDVGFVTSNP--------------ENRLITKVLKKGDVFVFPIGLAHFQRNV 160 (215)
Q Consensus 97 ~l~pgg-~-~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~--------------~~~~~~~~L~~GDv~~~P~G~~H~~~N~ 160 (215)
-+.|+| . .++|+-. ..-+++.++|+=+..+..+.. .......+|++||++++|+|..|+.++.
T Consensus 144 y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~ 222 (442)
T 2xdv_A 144 YITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTP 222 (442)
T ss_dssp EEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECC
T ss_pred EECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEec
Confidence 345554 4 3699876 577888889998888765421 0113578999999999999999999987
Q ss_pred C
Q 044045 161 G 161 (215)
Q Consensus 161 g 161 (215)
+
T Consensus 223 ~ 223 (442)
T 2xdv_A 223 A 223 (442)
T ss_dssp S
T ss_pred C
Confidence 5
No 153
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=94.93 E-value=0.24 Score=45.35 Aligned_cols=72 Identities=18% Similarity=0.311 Sum_probs=50.9
Q ss_pred EEEcCCcc--CCCccCCCccEEEEEEeCEEEEEEEecCC------------------CCeeEEEEEcCCCEEEEcCCCeE
Q 044045 96 IDYAPWGV--IPPHVHPRATEILTVIEGSLDVGFVTSNP------------------ENRLITKVLKKGDVFVFPIGLAH 155 (215)
Q Consensus 96 ~~l~pgg~--~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~------------------~~~~~~~~L~~GDv~~~P~G~~H 155 (215)
+-+.|+|. .++|+-+ -.-++.-++|+=+..+..+.. .......+|++||++++|+|..|
T Consensus 168 ~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred EEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 34555553 4799877 466777788887777765320 01235789999999999999999
Q ss_pred EEEeCCCCcEEEE
Q 044045 156 FQRNVGHGNAFSI 168 (215)
Q Consensus 156 ~~~N~g~~~a~~l 168 (215)
+..+.+++...-+
T Consensus 247 ~~~s~~~~~Slhl 259 (489)
T 4diq_A 247 QAECQDGVHSLHL 259 (489)
T ss_dssp EEEBCSSCCEEEE
T ss_pred EEEecCCCceEEE
Confidence 9999876544433
No 154
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.65 E-value=0.25 Score=42.24 Aligned_cols=83 Identities=18% Similarity=0.223 Sum_probs=60.1
Q ss_pred EEEEEEcCCccCCCccCCCccE-EEEEE-eCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCC--CeEEEEeCCCCcEEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATE-ILTVI-EGSLDVGFVTSNPENRLITKVLKKGDVFVFPIG--LAHFQRNVGHGNAFSI 168 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E-~~~Vl-~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G--~~H~~~N~g~~~a~~l 168 (215)
+....+.|+.-.++|-|. .-| +.||+ +|+++.. |+.| . ..++++||+=+.-+| +.|.-.|..+++...+
T Consensus 42 ld~~~~~~~~Gf~~HPHr-g~EtVTyvl~~G~~~H~--DS~G--n--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~l 114 (290)
T 1j1l_A 42 FDEFKGGRPGGFPDHPHR-GFETVSYLLEGGSMAHE--DFCG--H--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGL 114 (290)
T ss_dssp EEEEEECTTCBEEEEEEB-SEEEEEEECSSSCEEEE--ETTS--C--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEE
T ss_pred EEccccCCCCCCCCCCCC-CeEEEEEECcceEEEEe--eCCC--C--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEE
Confidence 344567788778999998 566 78999 9999876 4443 3 689999999888865 7899999877777776
Q ss_pred EEE---cC----CCCceeeec
Q 044045 169 SAL---SS----QNPGVITIA 182 (215)
Q Consensus 169 ~~~---~s----~~pg~~~~~ 182 (215)
-.. .. ..|.++.+.
T Consensus 115 QlWvnLP~~~k~~~P~y~~~~ 135 (290)
T 1j1l_A 115 QLWVNLRSSEKMVEPQYQELK 135 (290)
T ss_dssp EEEEECCGGGTTSCCEEEEEC
T ss_pred EEEecCChhhcCCCCcceecc
Confidence 322 22 246666654
No 155
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.64 E-value=0.14 Score=44.59 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=53.2
Q ss_pred EEcC-CccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-------------------------------------CCeeE
Q 044045 97 DYAP-WGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-------------------------------------ENRLI 137 (215)
Q Consensus 97 ~l~p-gg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-------------------------------------~~~~~ 137 (215)
-+.+ |...+.|+++..+ -+..++.|+=++.+..+.. ..+.+
T Consensus 177 ~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~ 256 (336)
T 3k2o_A 177 VMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPL 256 (336)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCE
T ss_pred EECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceE
Confidence 3444 5567789887543 5889999987777764321 01235
Q ss_pred EEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcC
Q 044045 138 TKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSS 173 (215)
Q Consensus 138 ~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s 173 (215)
+.++++||++++|+|..|+..|.++.-++-....+.
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~ 292 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASS 292 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCT
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCc
Confidence 789999999999999999999987643333333343
No 156
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.62 E-value=0.29 Score=41.41 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=54.1
Q ss_pred ceEEEEEEEcCCcc---CCCccCCCc--c------EEEEE-Ee---CEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCe
Q 044045 90 GASLARIDYAPWGV---IPPHVHPRA--T------EILTV-IE---GSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 90 gis~~~~~l~pgg~---~~pH~Hp~a--~------E~~~V-l~---G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
.+-+..+ +.|||. .|||.|++. . |+.|- +. |-+...+-..+++. -++..++-||++.+|+|.
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~-de~~~V~~~d~VlvP~Gy- 228 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSL-DECMAVYNRDVVXVPXGY- 228 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSS-EEEEEEETTCEEEESSSB-
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCC-ceEEEEECCCEEecCCCc-
Confidence 4666766 778773 489999854 3 87755 33 44443332222111 247999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEcCC
Q 044045 155 HFQRNVGHGNAFSISALSSQ 174 (215)
Q Consensus 155 H~~~N~g~~~a~~l~~~~s~ 174 (215)
|.....-.....++.++..+
T Consensus 229 Hp~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 229 HPVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp CCEEECTTCEEEEEEEEECS
T ss_pred CCCcCCCCcccEEEEEEECC
Confidence 98765544456688777653
No 157
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.41 E-value=0.076 Score=48.22 Aligned_cols=77 Identities=21% Similarity=0.119 Sum_probs=55.0
Q ss_pred cCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
++|+..+.|+.+.++ -+..+++|+=++.+..+.. ..+.+..++++||+++||.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 456677889987554 5678999998888765431 0235688999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEcCCC
Q 044045 155 HFQRNVGHGNAFSISALSSQN 175 (215)
Q Consensus 155 H~~~N~g~~~a~~l~~~~s~~ 175 (215)
|...|..+.-++-.-.+++.|
T Consensus 284 H~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 284 HAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEECSSCEEEEEEEECCSSS
T ss_pred EEEecCCCeEEEeeeeCCccc
Confidence 999998654333233445444
No 158
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=94.15 E-value=0.53 Score=40.07 Aligned_cols=81 Identities=19% Similarity=0.223 Sum_probs=54.6
Q ss_pred ceEEEEEEEcCCc---cCCCccCCCccEEEEEEe----CEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC
Q 044045 90 GASLARIDYAPWG---VIPPHVHPRATEILTVIE----GSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH 162 (215)
Q Consensus 90 gis~~~~~l~pgg---~~~pH~Hp~a~E~~~Vl~----G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 162 (215)
.+-+....+.||| ..|||.|.+..|..|--+ |.+ +++..+. ++.+...++-||++++|...+|.. .|.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p--~Etrhi~V~n~daVlvP~wh~h~~--~G~ 253 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV-FHMMGQP--QETRHIVMHNEQAVISPSWSIHSG--VGT 253 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCE-EEEEEET--TEEEEEEECSSEEEEECTTCEEEE--EES
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEE-EEEeCCC--CCeeEEEEECCCEEEeCCCCCCCC--CCc
Confidence 4567777788887 358999987777666554 443 3333332 333356789999999997677773 466
Q ss_pred CcEEEEEEEcCCC
Q 044045 163 GNAFSISALSSQN 175 (215)
Q Consensus 163 ~~a~~l~~~~s~~ 175 (215)
..-.+|++...+|
T Consensus 254 ~~Y~ylwvMAG~n 266 (282)
T 1xru_A 254 KAYTFIWGMVGEN 266 (282)
T ss_dssp SCCEEEEEEEESC
T ss_pred cceEEEEEEEcCC
Confidence 6666777775444
No 159
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.98 E-value=0.1 Score=47.79 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=49.7
Q ss_pred cCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
++|+..+.|..+.++ -+..+++|+=++.+..+.. ..+.++.++++||+++||+|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 456678899987544 4678999998888875520 1245688999999999999999
Q ss_pred EEEEeCCC
Q 044045 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999854
No 160
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.93 E-value=0.23 Score=40.12 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=57.8
Q ss_pred ccCCCCCcCce-EEEEEEEcCCccCCCccCCCccEE----EEEEeC-EEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCe
Q 044045 81 AQIPGLNTLGA-SLARIDYAPWGVIPPHVHPRATEI----LTVIEG-SLDVGFVTSNPENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 81 ~~~P~l~~~gi-s~~~~~l~pgg~~~pH~Hp~a~E~----~~Vl~G-~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
+++|++...+. ++....+.||+.++||..+....+ -.++-. ...+.++ ++ ++..++|+.++|.-...
T Consensus 91 ~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~-----~~--~~~w~eGe~~~fDds~~ 163 (197)
T 3rcq_A 91 EKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA-----NE--TKTWEEGKVLIFDDSFE 163 (197)
T ss_dssp TTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET-----TE--EECCCBTCEEEECTTSC
T ss_pred HhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC-----CE--EEEeeCCcEEEEcCCeE
Confidence 45554432222 455667999999999988743332 222222 3444442 33 78999999999999999
Q ss_pred EEEEeCCCCcEEEEEEEcCCCCc
Q 044045 155 HFQRNVGHGNAFSISALSSQNPG 177 (215)
Q Consensus 155 H~~~N~g~~~a~~l~~~~s~~pg 177 (215)
|...|.++++- ++.+++-..|.
T Consensus 164 Hev~N~~d~~R-vvL~~D~~rPd 185 (197)
T 3rcq_A 164 HEVWQDASSFR-LIFIVDVWHPE 185 (197)
T ss_dssp EEEEECSSSCE-EEEEEEEECTT
T ss_pred EEEEECCCCCE-EEEEEeeeCCC
Confidence 99999988754 44455544554
No 161
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.81 E-value=0.21 Score=45.25 Aligned_cols=65 Identities=14% Similarity=0.111 Sum_probs=49.8
Q ss_pred cCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
++|+..+.|..+.++ -+..|++|+=++.+..+.. ..+.++.++++||++++|+|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 455677889876544 4678999998888775421 0234688999999999999999
Q ss_pred EEEEeCCCC
Q 044045 155 HFQRNVGHG 163 (215)
Q Consensus 155 H~~~N~g~~ 163 (215)
|...|..+.
T Consensus 319 H~V~nleds 327 (447)
T 3kv4_A 319 HAVLTPVDC 327 (447)
T ss_dssp EEEEESSCE
T ss_pred EEEecCCCE
Confidence 999998654
No 162
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=93.33 E-value=0.2 Score=44.29 Aligned_cols=64 Identities=14% Similarity=0.134 Sum_probs=49.5
Q ss_pred cCCccCCCccCCCccE-EEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRATE-ILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~E-~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
++|+..+.|..+.++- +..+++|+=++.+..+.. ..+.++.++++||++++|+|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 4566778999876554 578999998888764320 0245688999999999999999
Q ss_pred EEEEeCCC
Q 044045 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|+..|..+
T Consensus 235 H~V~nled 242 (371)
T 3k3o_A 235 HAVLTPVD 242 (371)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999754
No 163
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=92.90 E-value=0.14 Score=45.83 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=49.5
Q ss_pred cCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
+.|+..+.|+.+.++ -+..+++|+=++.+..+.. ..+.++.++++||++++|+|..
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 446677889987655 3678999998888775421 0245688999999999999999
Q ss_pred EEEEeCCC
Q 044045 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|+..|..+
T Consensus 263 H~V~nled 270 (397)
T 3kv9_A 263 HAVLTSQD 270 (397)
T ss_dssp EEEEEEEE
T ss_pred EEccCCcC
Confidence 99999744
No 164
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=92.76 E-value=0.76 Score=32.71 Aligned_cols=65 Identities=17% Similarity=0.065 Sum_probs=48.1
Q ss_pred EEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEE
Q 044045 96 IDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 170 (215)
-.+.||. .+....+.|+.-|++|++++.+.++ .. .+++++||.+.+|++.--.++.. ++...++.
T Consensus 28 GVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~---~e--w~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 28 GVMLPGE---YTFGTQAPERMTVVKGALVVKRVGE---AD--WTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EEECSEE---EEEEESSCEEEEEEESEEEEEETTC---SS--CEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCC---Cc--CEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 3467774 3344447899999999999998654 23 78999999999999988777764 34444443
No 165
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=91.94 E-value=0.61 Score=42.09 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=49.5
Q ss_pred ceEEEEEEEc--CCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEE-EEEcCCCEEEEcCCCeEEEEeCC---CC
Q 044045 90 GASLARIDYA--PWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLIT-KVLKKGDVFVFPIGLAHFQRNVG---HG 163 (215)
Q Consensus 90 gis~~~~~l~--pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~-~~L~~GDv~~~P~G~~H~~~N~g---~~ 163 (215)
.+++.++++. ++.....-.+. +..+++|++|++++...+ .+. . ..|++||++++|++..-.+.+.+ .+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~-~~~illv~~G~g~i~~~~----~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~ 429 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLN-GPSIVIATNGKGTIQITG----DDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQ 429 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCS-SCEEEEEEESEEEEEETT----CGG-GCEEEETTCEEEECTTCCEEEEECSSCCSS
T ss_pred eEEEEEEEecCCCCceeEEecCC-CcEEEEEEeCeEEEEeCC----ccc-ceEEeccCCEEEEeCCCcEEEEEecccCCC
Confidence 4788888887 44221111233 678999999999987531 210 2 68999999999999655556541 44
Q ss_pred cEEEEEEE
Q 044045 164 NAFSISAL 171 (215)
Q Consensus 164 ~a~~l~~~ 171 (215)
.++++.++
T Consensus 430 ~~~~~~a~ 437 (440)
T 1pmi_A 430 DFTTYRAF 437 (440)
T ss_dssp CCEEEEEE
T ss_pred cEEEEEEE
Confidence 56655544
No 166
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=91.91 E-value=0.34 Score=43.16 Aligned_cols=64 Identities=11% Similarity=0.149 Sum_probs=49.4
Q ss_pred cCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
+.|+....|..+.++ -+..|++|+=++.+..+.. ..+.++.++++||++++|+|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 456677889977554 5789999998887765421 0234688999999999999999
Q ss_pred EEEEeCCC
Q 044045 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|...|..+
T Consensus 262 H~V~nled 269 (392)
T 3pua_A 262 YATLTPVD 269 (392)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999854
No 167
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.74 E-value=0.45 Score=38.62 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=46.1
Q ss_pred EEEEEEcCCccCCCccCCCcc--EEEEEE----eCEEEEEEEecCC-----------C-----CeeEEEEEcCCCEEEEc
Q 044045 93 LARIDYAPWGVIPPHVHPRAT--EILTVI----EGSLDVGFVTSNP-----------E-----NRLITKVLKKGDVFVFP 150 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~--E~~~Vl----~G~~~~~~~~~~~-----------~-----~~~~~~~L~~GDv~~~P 150 (215)
.....+++|+...+|.|+++. =++|+- .|++.+. ++.. + .......-++|++++||
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~--~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFp 182 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLE--DPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWE 182 (216)
T ss_dssp EEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEE--CTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEE
T ss_pred EEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEe--CCccccccccCcccccCcccCCCeeEecCCCCeEEEEC
Confidence 444568999999999998532 223332 2444443 3210 0 11124566999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEEEc
Q 044045 151 IGLAHFQRNVGHGNAFSISALS 172 (215)
Q Consensus 151 ~G~~H~~~N~g~~~a~~l~~~~ 172 (215)
+.+.|...-...+.-++-.+|+
T Consensus 183 S~l~H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 183 SWLRHEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp TTSCEEECCCCSSSCEEEEEEE
T ss_pred CCCEEeccCCCCCCCEEEEEEE
Confidence 9999998643333234333443
No 168
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=91.73 E-value=0.81 Score=39.05 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=45.9
Q ss_pred ceEEEEEEEcCCc---cCCCccCCCccEEEEEEe----CEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCC
Q 044045 90 GASLARIDYAPWG---VIPPHVHPRATEILTVIE----GSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGH 162 (215)
Q Consensus 90 gis~~~~~l~pgg---~~~pH~Hp~a~E~~~Vl~----G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~ 162 (215)
.+.+....+.||| ..|||.|.+..|..|--+ |. .+++.++- +..+...++-||++++|+|-.|. ..|.
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~-v~h~~g~p--dEtrh~~V~n~daVlvP~wgyHp--~~Gt 253 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTR-IFHMMGKP--DETKHLVMSNEQAAISPSWSIHS--GVGT 253 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCC-EEEEESST--TSCEEEEECTTEEEEECTTSCCC--EEES
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCe-EEEECCCC--CceEEEEEECCCEEEeCCCcccC--CCCC
Confidence 4557777788887 358999987777665443 32 23333322 34345788999999999998886 3444
Q ss_pred CcEEEEEEEcCCC
Q 044045 163 GNAFSISALSSQN 175 (215)
Q Consensus 163 ~~a~~l~~~~s~~ 175 (215)
..-.+|++...+|
T Consensus 254 ~~Y~ylwvMAG~n 266 (289)
T 1ywk_A 254 SNYSFIWAMCGEN 266 (289)
T ss_dssp SCCEEEEEEECC-
T ss_pred cCeEEEEEEEcCC
Confidence 5555777776544
No 169
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=91.15 E-value=1.1 Score=32.75 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=50.4
Q ss_pred EEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEE
Q 044045 96 IDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISAL 171 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~ 171 (215)
-.+.||. .+.+....+.|+.-|++|++++.+.++ .. .+++++|+.+.+|++.--.++.. ++...++.+
T Consensus 42 GVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~---~e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 42 GVILPTE-QPLTFETHVPERMEIISGECRVKIADS---TE--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EEECCCS-SCEEEECSSCEEEEEEESEEEEEETTC---SS--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCc---cc--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 3477873 224455557999999999999999754 23 78999999999999998877754 455555543
No 170
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=90.99 E-value=0.32 Score=44.91 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=49.0
Q ss_pred cCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCC-----------------------CCeeEEEEEcCCCEEEEcCCCe
Q 044045 99 APWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNP-----------------------ENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
+.|+...+|..+.++ -+..|++|+=++.+..+.. +++.+..++++||++++|+|..
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 455677789876544 5789999998888775531 1234578999999999999999
Q ss_pred EEEEeCCC
Q 044045 155 HFQRNVGH 162 (215)
Q Consensus 155 H~~~N~g~ 162 (215)
|...|..+
T Consensus 384 HaV~tleD 391 (528)
T 3pur_A 384 HAVLTPVD 391 (528)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 171
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.96 E-value=1.5 Score=32.49 Aligned_cols=65 Identities=15% Similarity=0.065 Sum_probs=43.5
Q ss_pred cCCCccC-CCccEEEEEEeCEEEEEEEecCCC-CeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 103 VIPPHVH-PRATEILTVIEGSLDVGFVTSNPE-NRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 103 ~~~pH~H-p~a~E~~~Vl~G~~~~~~~~~~~~-~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
+...|.- .+.-.-+.|++|++.+..-.++++ .-.....+.+|+..++|+...|.+...+ ++++..
T Consensus 28 l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sd--D~~f~l 94 (119)
T 3dl3_A 28 LLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSD--DAQFNI 94 (119)
T ss_dssp HHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECT--TCEEEE
T ss_pred HHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECC--CeEEEE
Confidence 3345543 323456899999999986544321 1123678899999999999999999433 344433
No 172
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=90.13 E-value=1.1 Score=38.63 Aligned_cols=55 Identities=29% Similarity=0.336 Sum_probs=40.8
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCe
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
-+++.++++.++... ....+..+++|++|++++... ++ ...|++||.+++|++..
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~~-----~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKYE-----DK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEET-----TE--EEEEETTCEEEECTTCC
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEEC-----CE--EEEEcCCcEEEEeCCCc
Confidence 467788887644322 223478899999999998652 33 67999999999999874
No 173
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=89.53 E-value=0.5 Score=42.04 Aligned_cols=55 Identities=18% Similarity=0.115 Sum_probs=41.0
Q ss_pred ceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCe
Q 044045 90 GASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
.+++.++++.++.. ...+. +..+++|++|++++... ++ +..|++||++++|++..
T Consensus 323 ~F~v~~~~l~~~~~--~~~~~-~~~il~v~~G~~~l~~~-----~~--~~~l~~G~~~fvpa~~~ 377 (394)
T 2wfp_A 323 DFAFSLHDLALQET--SIGQH-SAAILFCVEGEAVLRKD-----EQ--RLVLKPGESAFIGADES 377 (394)
T ss_dssp SCEEEEEECCSSCE--EECCS-SCEEEEEEEEEEEEEET-----TE--EEEECTTCEEEECGGGC
T ss_pred EEEEEEEEEcCCeE--EecCC-CcEEEEEEeceEEEEEC-----Ce--EEEEccCcEEEEeCCCc
Confidence 57888888875532 12344 67999999999987642 33 68999999999999853
No 174
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=89.26 E-value=2.7 Score=34.70 Aligned_cols=68 Identities=9% Similarity=-0.029 Sum_probs=47.9
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+..+.++||+....-..+.-.-++||++|++++. + ..|++||.+++..+..-.+.+. ++++++
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-------g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~L 224 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-------G----VKASTSDGLAIWDEQAISIHAD--SDSEVL 224 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-------T----EEEETTCEEEEESCSCEEEEES--SSEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-------C----EEeCCCCEEEECCCCeEEEEeC--CCCEEE
Confidence 46788889999998664333343356799999998872 2 3699999999987765555553 456655
Q ss_pred E
Q 044045 169 S 169 (215)
Q Consensus 169 ~ 169 (215)
.
T Consensus 225 l 225 (242)
T 1tq5_A 225 L 225 (242)
T ss_dssp E
T ss_pred E
Confidence 4
No 175
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=88.56 E-value=7.1 Score=33.05 Aligned_cols=77 Identities=10% Similarity=0.065 Sum_probs=50.6
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEE
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFS 167 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~ 167 (215)
...+.+..+.++||+.......+.-.-++||++|++++. +. .. ...+.++.++++..|..-.+.+.+.+++++
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~---~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~ 238 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD---DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHF 238 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT---TS--CEEECTTEEEEECSCSEEEEECCSSSCEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc---cc--ceeccCceEEEecCCCEEEEEEcCCCCcEE
Confidence 346888889999998764333333356899999999872 11 11 145666777777777665666545567777
Q ss_pred EEEE
Q 044045 168 ISAL 171 (215)
Q Consensus 168 l~~~ 171 (215)
+.+-
T Consensus 239 LLl~ 242 (290)
T 1j1l_A 239 VLIA 242 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7543
No 176
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.56 E-value=3.1 Score=34.65 Aligned_cols=71 Identities=14% Similarity=-0.008 Sum_probs=48.6
Q ss_pred CceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 89 LGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 89 ~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
..+.+..+.++||.........+. -++||++|++++. +.+ +. ...|++||.+++..+..-.+.+. ++++++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~--~~--~~~l~~gd~~~l~~~~~l~l~a~--~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THH--EE--KAALTCGDGAFIRDEANITLVAD--SPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETT--EE--EEEECTTCEEEEESCSEEEEEES--SSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccc--cc--ceEECCCCEEEECCCCeEEEEeC--CCCEEE
Confidence 467788899999987654444433 7899999998874 211 11 46799999999987665455542 455555
No 177
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.39 E-value=0.47 Score=42.09 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=31.8
Q ss_pred eeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCC
Q 044045 135 RLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISALSSQN 175 (215)
Q Consensus 135 ~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~ 175 (215)
+.++..-++||.++||+|.+|..+|..+.-.+..-.++.++
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 34688889999999999999999999865555554555444
No 178
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=88.20 E-value=9.6 Score=31.20 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=86.4
Q ss_pred ccccCCccccccccCCCCCCCCCCceEEEeecccCC------CCCcCceEEEEEEEcCCccCCCccC-CCccEEEEEEeC
Q 044045 49 KLAQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQIP------GLNTLGASLARIDYAPWGVIPPHVH-PRATEILTVIEG 121 (215)
Q Consensus 49 ~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P------~l~~~gis~~~~~l~pgg~~~pH~H-p~a~E~~~Vl~G 121 (215)
..-++++++=.+-=.| .+.|+..++...+... +-.. ..+....-|.+|.. -||| -++.|+.+-..|
T Consensus 17 ~~~ta~~lI~~L~L~P----HPEGG~yrEt~Rs~~~v~~~~~~~R~-~~TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G 89 (225)
T 3m3i_A 17 PQNTAEFWIKRLQLVP----HPEGGYYSEVVRSAHKVDNEEGNRRH-AYTTIYFLCTPESP--SHLHRLCSDETWMYHAG 89 (225)
T ss_dssp -CCCHHHHHHHTTCEE----CTTSSEEEEEEECSSEEECTTSCEEE-SCEEEEEEECSSSC--EEEEECSSEEEEEEEEE
T ss_pred CCCCHHHHHHHCCCcc----CCCCceEEEEEECCCcccCCCCCCcc-cceeEEEEecCCCC--cccEEecCCEEEEEECC
Confidence 3445555544431112 4567777777765432 2111 12333444777774 4555 358999999998
Q ss_pred E-EEEEEEecCCC--------------------------CeeEEEEEc----CCC--EEEEcCCCeEEEEeCCCC-----
Q 044045 122 S-LDVGFVTSNPE--------------------------NRLITKVLK----KGD--VFVFPIGLAHFQRNVGHG----- 163 (215)
Q Consensus 122 ~-~~~~~~~~~~~--------------------------~~~~~~~L~----~GD--v~~~P~G~~H~~~N~g~~----- 163 (215)
. +++.+..++|. .+..+.+|. +|+ -++||+|.-...+..+++
T Consensus 90 ~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~ 169 (225)
T 3m3i_A 90 DPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQA 169 (225)
T ss_dssp SCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSS
T ss_pred CCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCC
Confidence 8 57777766530 044566674 465 578999998777766543
Q ss_pred cEEEEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHhhhc
Q 044045 164 NAFSISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQLQT 213 (215)
Q Consensus 164 ~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~~ 213 (215)
...+++..- .||+..-...+ ++.+-|.+.|.--++.|++|-.
T Consensus 170 ~~sLVsCtV--aPGFdF~DFel------~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 170 GYSLVSCIV--SPGFDYRDFEI------FTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp SCEEEEEEE--ESCCCGGGCEE------CBHHHHHHHCGGGHHHHHHHSB
T ss_pred CeEEEEEEE--cCCccchhcEe------cCHHHHHHHCchHHHHHHHhch
Confidence 344443221 25554332222 4566777777777788887743
No 179
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=87.85 E-value=1.4 Score=31.96 Aligned_cols=56 Identities=18% Similarity=0.137 Sum_probs=43.7
Q ss_pred EEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEe
Q 044045 96 IDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRN 159 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N 159 (215)
-.+.||. .+....+.|+.-|++|++++.+.++ .. .+++++|+.+.+|++.--.++.
T Consensus 41 GVm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~---~e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 41 TLLHPGV---YTLSSEVAETIRVLSGMAYYHAEGA---ND--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EEECSEE---EEECCSSCEEEEEEEEEEEEECTTC---SS--CEEEETTCEEEECSSSCEEEEE
T ss_pred EEEeeeE---EEecCCCcEEEEEEEeEEEEECCCC---cc--CEEECCCCEEEECCCCcEEEEE
Confidence 3467773 4445557999999999999998654 23 7899999999999998776654
No 180
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=87.66 E-value=1.6 Score=31.43 Aligned_cols=52 Identities=12% Similarity=0.206 Sum_probs=36.9
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+.+| .......+.+||++
T Consensus 29 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPDG-RENMLAVVGPSELI 80 (149)
T ss_dssp EEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTTS-SEEEEEEECTTCEE
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCCC-cEEEEEEcCCcCEe
Confidence 45668888765332222 578999999999998876653 34456788999987
No 181
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=86.56 E-value=2.8 Score=35.66 Aligned_cols=56 Identities=21% Similarity=0.186 Sum_probs=40.5
Q ss_pred ceEEEEEEEcCCccCCCccCCCcc-EEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEE
Q 044045 90 GASLARIDYAPWGVIPPHVHPRAT-EILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQ 157 (215)
Q Consensus 90 gis~~~~~l~pgg~~~pH~Hp~a~-E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~ 157 (215)
-+++.++++.+.... .. .+. .+++|++| +++... ++ ...|++||++++|++...+.
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~-----~~--~~~l~~G~~~~ipa~~~~~~ 285 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRG-----KE--TADLHRGYSCLVPASTDSFT 285 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEES-----SS--EEEECTTCEEEECTTCCEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEeC-----Ce--EEEEccceEEEEeCCCceEE
Confidence 467888877642221 23 467 89999999 887652 33 57899999999999985443
No 182
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=86.45 E-value=10 Score=29.71 Aligned_cols=130 Identities=14% Similarity=0.138 Sum_probs=80.6
Q ss_pred CCC-CceEEEeecccC-------CCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCE-EEEEEEecCCCCeeEEE
Q 044045 69 NPL-GSRVTPVTVAQI-------PGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGS-LDVGFVTSNPENRLITK 139 (215)
Q Consensus 69 ~~~-g~~~~~~~~~~~-------P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~-~~~~~~~~~~~~~~~~~ 139 (215)
.+. |+..++...... .+-.. ..+....-|.+|....+|.- +++|+.+-..|. +++.+..++ ++..+.
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~-~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~d--G~~~~~ 99 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRS-VLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPD--GSYSCS 99 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEE-SCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTT--SCEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCcc-cceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCC--CceEEE
Confidence 455 777777665532 22221 12344445777774444443 489999999986 688888776 565677
Q ss_pred EEc----CCC---EEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCceeeechhhhcCCCCCCHHHHHHHcCCCHHHHHhhh
Q 044045 140 VLK----KGD---VFVFPIGLAHFQRNVGHGNAFSISALSSQNPGVITIANAVFGSNPSIADDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 140 ~L~----~GD---v~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vl~~af~~~~~~v~~l~ 212 (215)
+|. +|+ -++||+|.-...+. | ...+++.. --||+..-...+ .+.+-|.+.|.--++.|++|-
T Consensus 100 ~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 100 ILGNPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKDFSL------GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp EESCTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGGCEE------CCHHHHHHHCGGGHHHHHHTS
T ss_pred EeCCCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchhcEE------cCHHHHHHHCchHHHHHHHhc
Confidence 764 577 78999999777776 3 34444322 135554332222 356777778888888888875
Q ss_pred c
Q 044045 213 T 213 (215)
Q Consensus 213 ~ 213 (215)
.
T Consensus 169 ~ 169 (172)
T 3loi_A 169 S 169 (172)
T ss_dssp C
T ss_pred c
Confidence 4
No 183
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=86.14 E-value=1.5 Score=31.30 Aligned_cols=54 Identities=13% Similarity=0.266 Sum_probs=33.4
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeE---EEEEcCCCEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLI---TKVLKKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~---~~~L~~GDv~~ 148 (215)
+....+++|...-.- ...+..+.+|++|++.+...++++ .+.. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGA-GSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCC-CceEeeeEEEecCCCEec
Confidence 345668888754322 233688999999999988765542 2333 56789999884
No 184
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=85.06 E-value=3.1 Score=31.60 Aligned_cols=53 Identities=9% Similarity=-0.044 Sum_probs=37.6
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-.- ......+.+|++|.+++...+++| .+.....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G-~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKG-IEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCC-CEEEEEEccCCcEEe
Confidence 35567888754322 222678999999999998876654 344566789999985
No 185
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=84.78 E-value=3.2 Score=31.76 Aligned_cols=53 Identities=23% Similarity=0.336 Sum_probs=37.2
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-. -......+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIY-AGDRCETLFFIIKGSVTILIEDDDG-REMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCCcc
Confidence 3456788875532 2223578999999999998876653 344567889999884
No 186
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=84.60 E-value=4.1 Score=34.26 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=49.0
Q ss_pred cCceEEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcC-C----CeEEEEeCCC
Q 044045 88 TLGASLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPI-G----LAHFQRNVGH 162 (215)
Q Consensus 88 ~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~-G----~~H~~~N~g~ 162 (215)
...+.+..+.++||........+.-.-++||++|++++. +. ...|++||.+++.. + ..-.+.+.
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-------g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~-- 232 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-------AD--NIEGKAGQALFFSRHNRGEETELNVTAR-- 232 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-------TT--TEEEETTEEEEECCCCTTCEEEEEEEES--
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-------CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--
Confidence 347888999999998765433333356899999998762 21 24799999999986 6 44445553
Q ss_pred CcEEEEEE
Q 044045 163 GNAFSISA 170 (215)
Q Consensus 163 ~~a~~l~~ 170 (215)
++++++.+
T Consensus 233 ~~a~~Ll~ 240 (277)
T 2p17_A 233 EKLRLLLY 240 (277)
T ss_dssp SSEEEEEE
T ss_pred CCcEEEEE
Confidence 35666643
No 187
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=83.80 E-value=3.2 Score=31.99 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=37.6
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGG-QERTLALLGPGELFG 75 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSS-CEEEEEEECTTCEEC
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEe
Confidence 34567888755332223 678999999999998876653 344567889999883
No 188
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=83.62 E-value=3.4 Score=32.44 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=37.3
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTG-SEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTS-CEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 44568888765332223 678999999999998876653 34456788999988
No 189
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=83.61 E-value=3.9 Score=31.33 Aligned_cols=53 Identities=17% Similarity=0.235 Sum_probs=37.2
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTC-CEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEee
Confidence 34567888755332223 678999999999998876653 344566789999984
No 190
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=83.34 E-value=3.8 Score=30.19 Aligned_cols=52 Identities=6% Similarity=-0.027 Sum_probs=35.7
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+.+|...-. -...+..+.+|++|++.+.. ..+| .......+.+||++
T Consensus 61 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~-~~~g-~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVID-QGDDGDNFYVIDRGTFDIYV-KCDG-VGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEESEEEEEE-EETT-EEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEe-CCCCCcEEEEEEeCEEEEEE-cCCC-CeEEEEEcCCCCEe
Confidence 34466888876532 23336889999999999988 4442 33445678999966
No 191
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=83.30 E-value=3.4 Score=31.61 Aligned_cols=53 Identities=9% Similarity=0.036 Sum_probs=37.7
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+++|...-.- -..+..+.+|++|++.+...+++| .+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~-G~~~~~ly~I~~G~v~v~~~~~~g-~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTE-GDPGDYLLLILTGEVNVIKDIPNK-GIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEEETTT-EEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCC-CeEEEEEccCCCee
Confidence 345668888765332 223688999999999998877653 33456688999987
No 192
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=82.98 E-value=3.7 Score=31.94 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=37.8
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDD-RELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEE
Confidence 45568888755332223 678999999999998877653 344567889999984
No 193
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=82.80 E-value=4.2 Score=31.70 Aligned_cols=52 Identities=12% Similarity=0.275 Sum_probs=36.9
Q ss_pred EEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 95 RIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 95 ~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
...+++|...-.. ......+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 31 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 31 PVDFPRGHTVFAE-GEPGDRLYIIISGKVKIGRRAPDG-RENLLTIMGPSDMFG 82 (227)
T ss_dssp EEEECTTCEEECT-TCCCCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred EEEeCCCCEEEcC-CCcCCEEEEEEeeEEEEEEECCCC-cEEEEEEecCCCEEe
Confidence 4568888765322 222678999999999998876653 344567889999873
No 194
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=82.69 E-value=3.6 Score=32.15 Aligned_cols=54 Identities=11% Similarity=0.101 Sum_probs=37.8
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
+....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGG-RERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC---CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCC-ceEEEEecCCCCEEe
Confidence 345678888866433233 678999999999998876653 344567889999873
No 195
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=82.15 E-value=0.99 Score=38.55 Aligned_cols=47 Identities=26% Similarity=0.266 Sum_probs=34.8
Q ss_pred ccEEEEEEe-CEEEEEEEecC---------CCCe------eEEEEEcCCCEEEEcCCCeEEEE
Q 044045 112 ATEILTVIE-GSLDVGFVTSN---------PENR------LITKVLKKGDVFVFPIGLAHFQR 158 (215)
Q Consensus 112 a~E~~~Vl~-G~~~~~~~~~~---------~~~~------~~~~~L~~GDv~~~P~G~~H~~~ 158 (215)
-.|+.|+++ .++..||.... .+++ +....+++||.+++|+|.+|.+-
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 379999998 55666664321 0123 45789999999999999999984
No 196
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=81.78 E-value=1.5 Score=31.88 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=34.5
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEccCCCee
Confidence 345668888765332233 678999999999988665442 22335688999987
No 197
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=81.54 E-value=3.4 Score=31.54 Aligned_cols=50 Identities=18% Similarity=0.146 Sum_probs=33.6
Q ss_pred EEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 97 DYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 97 ~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
.+++|...-..-.+ +..+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDG-RLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEec
Confidence 35666544221122 567999999999998876653 334567889999884
No 198
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=81.23 E-value=3.3 Score=32.69 Aligned_cols=53 Identities=11% Similarity=0.113 Sum_probs=37.5
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKEN-IYTVIEQIEAPYLI 95 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGG-SCEEEEEEESSEEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCC-CEEEEEEccCCCee
Confidence 355668888765332223 678999999999998766653 34456788999987
No 199
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=80.80 E-value=1.2 Score=38.38 Aligned_cols=47 Identities=23% Similarity=0.311 Sum_probs=31.8
Q ss_pred ccEEEEEEeC----EEEEEEEecCC--------CCe----eEEEEEcCCCEEEEcCCCeEEEE
Q 044045 112 ATEILTVIEG----SLDVGFVTSNP--------ENR----LITKVLKKGDVFVFPIGLAHFQR 158 (215)
Q Consensus 112 a~E~~~Vl~G----~~~~~~~~~~~--------~~~----~~~~~L~~GDv~~~P~G~~H~~~ 158 (215)
-.|+.|+++. ++.++....+. ++. +....|++||.+++|+|.+|.+-
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 5899999985 34444211100 000 14789999999999999999983
No 200
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=80.79 E-value=8.1 Score=29.96 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=43.6
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
....+++|...-..-.+ ...+.+|++|.+.+. ..++| .+.....+.+||++- ....+...... ++.++
T Consensus 24 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G-~~~~~~~~~~G~~fG--~~~~~~~~A~~--~~~v~ 91 (222)
T 1ft9_A 24 RSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEE-REISLFYLTSGDMFC--MHSGCLVEATE--RTEVR 91 (222)
T ss_dssp EEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETT-EEEEEEEEETTCEEE--SCSSCEEEESS--CEEEE
T ss_pred cEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC-CEEEEEEcCCCCEec--CCCCEEEEEcc--ceEEE
Confidence 45668888765322223 578999999999995 44542 334457889999987 44445555543 44444
No 201
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=80.59 E-value=4.8 Score=31.98 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=39.2
Q ss_pred EEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 92 SLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 92 s~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
.+....+++|...-.---+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 42 ~~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G-~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 42 PPVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAG-EEITVALLRENSVFG 96 (243)
T ss_dssp CCEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTC-CEEEEEEECTTCEES
T ss_pred hheeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEc
Confidence 3446678888865332223 578999999999998877664 344567889999873
No 202
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=80.38 E-value=3.2 Score=32.50 Aligned_cols=53 Identities=11% Similarity=0.160 Sum_probs=34.7
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYG-RFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC------CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 345668888765332223 678999999999988765543 34457789999987
No 203
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=80.21 E-value=5.4 Score=32.15 Aligned_cols=53 Identities=17% Similarity=0.235 Sum_probs=38.0
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-.---+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 70 ~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIG 122 (260)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTC-CEEEEEEEETTCEES
T ss_pred EEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEEe
Confidence 45568888765322223 678999999999998876653 344567889999984
No 204
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=79.58 E-value=25 Score=29.48 Aligned_cols=81 Identities=7% Similarity=-0.032 Sum_probs=53.0
Q ss_pred EEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEE-EEEEeCEEEEEEEecCCCCeeEEEEE--cC--------
Q 044045 75 VTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEI-LTVIEGSLDVGFVTSNPENRLITKVL--KK-------- 143 (215)
Q Consensus 75 ~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~-~~Vl~G~~~~~~~~~~~~~~~~~~~L--~~-------- 143 (215)
+..++.+.-+ +. -+.+..++|++|.......-. .|+ ++.+.|++++.+. ++ ++.+ ..
T Consensus 16 ~~~itp~~a~-~~--y~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~~-----g~--~~~~~g~R~svF~~~~ 83 (270)
T 2qjv_A 16 IQHISPQNAG-WE--YVGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXAA-----DS--FFYRIGQRMSPFERIP 83 (270)
T ss_dssp EEEECHHHHT-SS--SCEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEET-----TE--EEEEECCCSSGGGCSC
T ss_pred EEEeCCCCCC-cE--EeEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEEC-----CE--EEeccccccccccCCC
Confidence 5555543322 22 367788889999876655443 565 6667899999885 34 4544 22
Q ss_pred CCEEEEcCCCeEEEEeCCCCcEEEEE
Q 044045 144 GDVFVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 144 GDv~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
.|.+++|+|..-.+...+ ++++..
T Consensus 84 p~~lYvp~g~~v~i~a~~--~~~~~v 107 (270)
T 2qjv_A 84 AYSVYLPHHTEAXVTAET--DLELAV 107 (270)
T ss_dssp CCEEEECSSCCEEEEESS--SEEEEE
T ss_pred CcEEEECCCCEEEEEecC--CceEEE
Confidence 499999999976677655 466554
No 205
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=79.56 E-value=3.7 Score=31.90 Aligned_cols=52 Identities=19% Similarity=0.329 Sum_probs=37.0
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++
T Consensus 23 ~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 23 KVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENG-KTLEIDEIKPVQII 74 (213)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECSSEES
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEe
Confidence 45568888765332233 578999999999998876653 33456778999987
No 206
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=79.00 E-value=11 Score=29.16 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=43.1
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
....+++|...-.--.+ ...+.+|++|.+.+. .+.+| .+.....+.+||++-. ...+..... +++.++
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G-~~~~~~~~~~G~~~G~--~~~~~~~A~--~~~~v~ 95 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYED-KEFTLAILEAGDIFCT--HTRAFIQAM--EDTTIL 95 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECSS-CEEEEEEEETTCEEES--CSSSEEEES--SSEEEE
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC-CEEEEEEcCCCCEeCC--ccceEEEEc--CcEEEE
Confidence 45568888765322223 678999999999994 55543 3345678899998866 233444544 345544
No 207
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=78.57 E-value=5.5 Score=30.69 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=37.4
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++.
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~~ 79 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEG-REITLYRLFDMDMCL 79 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCC-CEEEEEecCCCCeee
Confidence 34568888765332223 678999999999998876653 344457789999963
No 208
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=78.11 E-value=4.6 Score=30.94 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=43.2
Q ss_pred EEEcCCccCCCccCCCc--cEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEE----cCCCeEEEEeCCCCcEEEEE
Q 044045 96 IDYAPWGVIPPHVHPRA--TEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVF----PIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a--~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~----P~G~~H~~~N~g~~~a~~l~ 169 (215)
..+++|...-..-.+ . ..+.+|++|.+.+...+++| .+.....+.+||++-. .....+..... +++.++.
T Consensus 8 ~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~--~~~~v~~ 83 (202)
T 2zcw_A 8 VSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEEG-NALTLRLVRPGGFFGEEALFGQERIYFAEAA--TDVRLEP 83 (202)
T ss_dssp EEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTTS-CEEEEEEECTTCEECTHHHHTCCBCSEEEES--SCEEEEE
T ss_pred EEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCCC-cEEEEEEecCCCEeeehhcCCCCcceEEEEc--ccEEEEE
Confidence 457777654322223 4 66899999999998876653 3445678899998743 11233344444 3455554
Q ss_pred E
Q 044045 170 A 170 (215)
Q Consensus 170 ~ 170 (215)
+
T Consensus 84 i 84 (202)
T 2zcw_A 84 L 84 (202)
T ss_dssp C
T ss_pred E
Confidence 4
No 209
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=77.43 E-value=5.6 Score=31.61 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=37.5
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-.---+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 33 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 33 LIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDG-SEKLLYYAGGNSLIG 85 (250)
T ss_dssp EEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred eEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEe
Confidence 45568888765332223 577999999999998876653 344567789999884
No 210
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=76.62 E-value=24 Score=27.15 Aligned_cols=96 Identities=13% Similarity=0.087 Sum_probs=61.0
Q ss_pred CCCCceEEEeecccCCCCCcCceEEEEEEEcCCccCCCccCCCccEEEEEEeCE-EEEEEEecCCCCeeEEEEEc----C
Q 044045 69 NPLGSRVTPVTVAQIPGLNTLGASLARIDYAPWGVIPPHVHPRATEILTVIEGS-LDVGFVTSNPENRLITKVLK----K 143 (215)
Q Consensus 69 ~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~-~~~~~~~~~~~~~~~~~~L~----~ 143 (215)
.+.|+..++...+...+-... .+....-|.+|....+|.-.+++|+.+-..|. +++.+..++ +...+.+|. +
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~~-~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~d--g~~~~~~LG~d~~~ 95 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERGH-STAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDG--REVQTFTLGPAILE 95 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTCS-CEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSS--SCCEEEEESSCTTT
T ss_pred CCCCccEEEEEeCCCCCCCcc-eeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCC--CcEEEEEeCCCccc
Confidence 467888888777654332322 23333346677654455432499999999988 777777665 455566674 4
Q ss_pred CCE--EEEcCCCeEEEEeCCCCcEEEEE
Q 044045 144 GDV--FVFPIGLAHFQRNVGHGNAFSIS 169 (215)
Q Consensus 144 GDv--~~~P~G~~H~~~N~g~~~a~~l~ 169 (215)
|+. ++||+|.-...+..| .-.+++
T Consensus 96 Ge~pQ~vVP~G~WqaA~~~g--~~~LVs 121 (154)
T 1znp_A 96 GERPQVIVPANCWQSAESLG--DFTLVG 121 (154)
T ss_dssp TEESEEEECTTCEEEEEESS--SEEEEE
T ss_pred CcccEEEEcCCEEEEeeECC--CeEEEE
Confidence 654 899999988877654 344443
No 211
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=76.59 E-value=2.1 Score=38.02 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=20.9
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEe
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRN 159 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N 159 (215)
+....|++||.+++|+|.+|.+-.
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcCC
Confidence 446789999999999999999853
No 212
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=74.20 E-value=10 Score=30.67 Aligned_cols=54 Identities=24% Similarity=0.257 Sum_probs=37.6
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+.+|...-..-.+ +..+.+|++|++.+.....++........+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 455678888765433233 688999999999998755432123457789999988
No 213
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=73.09 E-value=9 Score=30.17 Aligned_cols=71 Identities=8% Similarity=-0.000 Sum_probs=43.4
Q ss_pred EEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcC---CC----eEEEEeCCCCcEEE
Q 044045 95 RIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPI---GL----AHFQRNVGHGNAFS 167 (215)
Q Consensus 95 ~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~---G~----~H~~~N~g~~~a~~ 167 (215)
...+++|...-. -......+.+|++|.+.+...+.+| .+.....+ +||++-... +. .+...... +++.+
T Consensus 20 ~~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v 95 (238)
T 2bgc_A 20 PKQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENG-TIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATA 95 (238)
T ss_dssp CEEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTS-CEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEE
T ss_pred EEEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCC-CEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEE
Confidence 345777775522 2223678999999999998876653 33334556 899885542 22 45555554 45555
Q ss_pred EE
Q 044045 168 IS 169 (215)
Q Consensus 168 l~ 169 (215)
+.
T Consensus 96 ~~ 97 (238)
T 2bgc_A 96 YV 97 (238)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 214
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=72.21 E-value=50 Score=28.86 Aligned_cols=41 Identities=15% Similarity=0.009 Sum_probs=35.9
Q ss_pred EEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEE
Q 044045 115 ILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQR 158 (215)
Q Consensus 115 ~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~ 158 (215)
-..|++|++++....++ +.....|+++|..++-+-++|.+.
T Consensus 357 hY~v~~G~lTL~W~~~d---Gt~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 357 HYVVTEGRLTLEWDGPD---GPASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEEESCEEEEEEETT---EEEEEEECTTCEEEECTTCCEEEE
T ss_pred eEEEecCceEEEecCCC---CccceEECCCCceeeccccccccc
Confidence 34588999999998774 447899999999999999999998
No 215
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=71.13 E-value=9.1 Score=29.19 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=34.9
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+.||...-.. ...+..+.+|++|++.+.. ++ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~~~~--~~--g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQE-GTFGDRMFFIQQGIVDIIM--SD--GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECT-TSCCSEEEEEEECCEEEEC--TT--SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEEC-CCcCcEEEEEEeCEEEEEe--cC--Ce-EEEEecCCCEe
Confidence 455668888765322 2236789999999999875 33 44 57889999987
No 216
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=69.50 E-value=8.4 Score=29.56 Aligned_cols=48 Identities=19% Similarity=0.188 Sum_probs=33.2
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+.||..+-..-.+ +.++.+|++|++.+.. .+ ++ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~--g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KG--NK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TT--SC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CC--Ce--EEEEcCCCEe
Confidence 345668888765332233 6789999999998853 33 44 4579999987
No 217
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=68.35 E-value=4.1 Score=36.63 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=20.2
Q ss_pred EEEEEcCCCEEEEcCCCeEEEEe
Q 044045 137 ITKVLKKGDVFVFPIGLAHFQRN 159 (215)
Q Consensus 137 ~~~~L~~GDv~~~P~G~~H~~~N 159 (215)
-...|++||.+++|+|.+|.+..
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCC
Confidence 35679999999999999999864
No 218
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=68.18 E-value=15 Score=26.45 Aligned_cols=49 Identities=29% Similarity=0.347 Sum_probs=33.6
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVF 149 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~ 149 (215)
....+++|...-.- ......+.+|++|.+.+... +. ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~-----~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQD-----DE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEET-----TE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEEC-----CE-EEEEecCCCEeCc
Confidence 34567787754322 22368999999999998652 22 4678999998843
No 219
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=65.61 E-value=18 Score=26.12 Aligned_cols=48 Identities=13% Similarity=0.241 Sum_probs=33.9
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+.+|...-.- ......+.+|++|.+.+... ++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~-----~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYVN-----NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESCEEEEET-----TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEEC-----CE-EEEEecCCCEe
Confidence 344668888765322 23368899999999998762 44 35679999987
No 220
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=65.06 E-value=13 Score=30.82 Aligned_cols=51 Identities=20% Similarity=0.173 Sum_probs=36.2
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|..+-.- -..+..+.+|++|.+.+...+.+ ++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQ-GEPAVSFLLISSGSAEVSHVGDD--GVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECT-TSBCCCEEEEEECCEEEEEECTT--CCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeC-CCcCCEEEEEEeeEEEEEEECCC--CcEEEEEecCCCEe
Confidence 45567888654222 22257799999999999887665 44467788999987
No 221
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=63.47 E-value=21 Score=25.10 Aligned_cols=47 Identities=15% Similarity=0.204 Sum_probs=32.9
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-.- ......+.+|++|++.+.. + ++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~--g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---E--GV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---T--TE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---C--CE-EEEEeCCCCEe
Confidence 45667888754322 2336889999999999843 2 44 46788999987
No 222
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=63.13 E-value=16 Score=29.69 Aligned_cols=52 Identities=21% Similarity=0.326 Sum_probs=36.1
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEe-cCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVT-SNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~-~~~~~~~~~~~L~~GDv~ 147 (215)
....+.+|..+-.- ...+..+.+|++|++.+.... .++ .......+.+||++
T Consensus 181 ~~~~~~~g~~I~~~-G~~~~~~yiI~~G~v~~~~~~~~~g-~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQ-GARGDTFFIISKGKVNVTREDSPNE-DPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECT-TCEECEEEEEEESEEEEEECCSSSC-CCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeC-CCCCCEEEEEEeeEEEEEEecCCCC-cceEEEEcCCCCEe
Confidence 45567888754322 223678999999999998875 332 33456789999988
No 223
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=62.09 E-value=3.1 Score=32.33 Aligned_cols=53 Identities=15% Similarity=0.209 Sum_probs=36.0
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
....+++|...-..-.+ ...+.+|++|.+.+...+++| .+.....+.+||++-
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFA 85 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGG-CCBCCCEECTTEEES
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEee
Confidence 44567777755332233 678999999999988765543 233456788999874
No 224
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=61.78 E-value=8.7 Score=33.30 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=27.1
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
++..+=++||.+++++|..|+.+|.|-.-.+.+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 457788999999999999999999996444333
No 225
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=61.38 E-value=74 Score=26.88 Aligned_cols=66 Identities=12% Similarity=0.028 Sum_probs=42.2
Q ss_pred EEEcCCccCCCccCCCccEE-EEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC--CCcEEEE
Q 044045 96 IDYAPWGVIPPHVHPRATEI-LTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG--HGNAFSI 168 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~-~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l 168 (215)
+.|+.|......+-....|+ ++.+.|++++.+. ++ ++.|.+-|.+++|+|......... ..++++.
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vd-----g~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEID-----GA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEEC-----CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 45666654443332335676 5556899998875 44 679999999999999764444322 3445544
No 226
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=59.67 E-value=13 Score=26.14 Aligned_cols=48 Identities=10% Similarity=0.202 Sum_probs=32.3
Q ss_pred EEEEEEc-CCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYA-PWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~-pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+. +|...- +-......+.+|++|++.+.. .+ ++ ...+.+||++
T Consensus 39 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~--~~--g~--~~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISH--PD--GK--VENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEE-CTTCEECEEEECCBSCEEEEC--SS--SC--EEEECTTCEE
T ss_pred heEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEc--CC--Cc--EEEecCCCcc
Confidence 3455677 776542 223336779999999999873 33 45 3779999977
No 227
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=59.30 E-value=24 Score=27.63 Aligned_cols=66 Identities=9% Similarity=-0.045 Sum_probs=48.0
Q ss_pred CCccCCCccEEEEEEeCEEEEEEEecCCC----CeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEE
Q 044045 105 PPHVHPRATEILTVIEGSLDVGFVTSNPE----NRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 105 ~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~----~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 170 (215)
..-.|+.++|.++-+.|...+-++.++++ +++..+....|+.+.+-+|+-|.-.-.-+++..++.+
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vv 141 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEE
Confidence 45679999999999999876655555421 3467999999999999999999653333344555543
No 228
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=59.26 E-value=19 Score=27.96 Aligned_cols=66 Identities=12% Similarity=0.053 Sum_probs=47.9
Q ss_pred CCccCCCccEEEEEEeCEEEEEEEecCCC----CeeEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEEEE
Q 044045 105 PPHVHPRATEILTVIEGSLDVGFVTSNPE----NRLITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSISA 170 (215)
Q Consensus 105 ~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~----~~~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l~~ 170 (215)
..-.|+.++|.++-+.|...+-++.++++ +++..+...+|+.+.+-+|+-|.-.-.-+++..++.+
T Consensus 70 ~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 70 ELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 35669989999999999976555544321 3466889999999999999999854433445656533
No 229
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=57.71 E-value=29 Score=30.27 Aligned_cols=52 Identities=6% Similarity=-0.029 Sum_probs=36.2
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+.+|..+--.-.+ +..+.+|++|++.+... .+| .......+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~-~~G-~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVK-CDG-VGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEE-CSS-CEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEe-cCC-CEEEEEEecCCCEE
Confidence 445678888765333233 68999999999998873 332 33446789999977
No 230
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=57.40 E-value=17 Score=27.87 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=34.5
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~ 148 (215)
+....+.||...-.---+ +..+.+|++|++.+... +. ....+.+||++-
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~-----~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLKD-----NT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEESS-----SC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEEC-----Ce-EEEEecCCCCcC
Confidence 345568888765322223 68999999999998742 32 478899999884
No 231
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=55.15 E-value=13 Score=26.02 Aligned_cols=45 Identities=27% Similarity=0.287 Sum_probs=31.3
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-..-.+ ...+.+|++|.+.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~-----~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP-----N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS-----S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC-----C---cceECCCCEe
Confidence 45668888765332233 67899999999998643 2 3578889876
No 232
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=54.89 E-value=24 Score=30.72 Aligned_cols=55 Identities=18% Similarity=0.088 Sum_probs=38.1
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCC-eeEEEEEcCCCEEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPEN-RLITKVLKKGDVFV 148 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~-~~~~~~L~~GDv~~ 148 (215)
+....+++|...-. -...+..+.+|++|++.+.....+|.. ......+.+||++-
T Consensus 65 ~~~~~~~~g~~i~~-~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 65 GYYENLEKGITLFR-QGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEEC
T ss_pred ceEEEECCCCEEEe-CCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcc
Confidence 34557888875532 233367899999999999887665311 24678899999884
No 233
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=50.54 E-value=17 Score=28.17 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=33.0
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-..-.+ +..+.+|++|++.+... ++. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~-----~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVN-----DNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEEST-----TSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEEC-----CEE-EEecCCCCee
Confidence 35567788755322233 78999999999998752 232 5789999988
No 234
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=49.60 E-value=36 Score=27.24 Aligned_cols=47 Identities=13% Similarity=0.215 Sum_probs=34.2
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+++|...-..-.+ +..+.+|++|++.+... ++ ....+.+||++
T Consensus 63 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~-----g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 63 FPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN-----NE-WATSVGEGGSF 109 (291)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEECCEEEEET-----TE-EEEEECTTCEE
T ss_pred cEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEEC-----Ce-EEEEcCCCCcc
Confidence 45668888765332233 68899999999998762 43 47889999987
No 235
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=48.46 E-value=30 Score=29.63 Aligned_cols=51 Identities=18% Similarity=0.161 Sum_probs=33.6
Q ss_pred EEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 96 IDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
..+.+|..+-.- ...+..+.+|++|++.+.....+++.......+.+||++
T Consensus 274 ~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 345666554322 223688999999999998765432113346789999987
No 236
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=47.96 E-value=30 Score=26.70 Aligned_cols=48 Identities=21% Similarity=0.238 Sum_probs=33.2
Q ss_pred EEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 94 ARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 94 ~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
....+.+|...-.. -..+..+.+|.+|++.+..... + ....+.+||++
T Consensus 149 ~~~~~~~g~~i~~~-g~~~~~~y~I~~G~v~v~~~~~---~--~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIRE-GDQGENFYLIEYGAVDVSKKGQ---G--VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEECEEEEEETTT---E--EEEEEETTCEE
T ss_pred heEEeCCCCEEEeC-CCcCCEEEEEEecEEEEEEcCC---c--eEEEcCCCCcc
Confidence 44567788754322 2236889999999999876422 2 36789999987
No 237
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=46.98 E-value=20 Score=32.81 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=25.2
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEeCCCCc
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRNVGHGN 164 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~ 164 (215)
++..+=++||.+++++|..|+.+|.|-..
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~Gf~~ 340 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQATGWCN 340 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecCeee
Confidence 45678899999999999999999998643
No 238
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=45.31 E-value=32 Score=31.65 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=27.0
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEEeCCCCcEEEE
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQRNVGHGNAFSI 168 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~N~g~~~a~~l 168 (215)
++..+=++||.+++++|..|+.+|.|-.-.+.+
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 456788999999999999999999996444333
No 239
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=43.74 E-value=40 Score=27.17 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=33.9
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+++|...--.-.+ +..+.+|++|++.+... ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~-----g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTKE-----GV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEET-----TE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEEC-----CE-EEEEeCCCCee
Confidence 345678888765333233 67899999999998432 33 46789999987
No 240
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=42.07 E-value=73 Score=23.80 Aligned_cols=56 Identities=16% Similarity=0.133 Sum_probs=40.7
Q ss_pred CCCccCCCccEEEEEEeCEEEEEEEecCC------------------CC-eeEEEEEcCCCEEEEcCCCeEEEEe
Q 044045 104 IPPHVHPRATEILTVIEGSLDVGFVTSNP------------------EN-RLITKVLKKGDVFVFPIGLAHFQRN 159 (215)
Q Consensus 104 ~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~------------------~~-~~~~~~L~~GDv~~~P~G~~H~~~N 159 (215)
..+-.|.+-..+-|+++|+=++++....+ ++ ......|++|+.++|-++-+|.-..
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 35566888899999999987877764210 01 1125688999999999999998644
No 241
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=41.01 E-value=40 Score=29.29 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=33.7
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecC------CCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSN------PENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~------~~~~~~~~~L~~GDv~ 147 (215)
+....+.+|..+-.- ...+..+.+|++|++.+.....+ + .......+.+||++
T Consensus 290 l~~~~~~~Ge~I~~e-Gd~~~~~yiI~sG~v~v~~~~~~~~~~~~g-~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQ-GDLADSFFIVESGEVKITMKRKGKSEVEEN-GAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEECC-------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCcccccCC-ceeEEEEeCCCCEe
Confidence 345567888754322 22368999999999998765432 2 23346788999987
No 242
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=39.13 E-value=53 Score=27.68 Aligned_cols=50 Identities=12% Similarity=-0.009 Sum_probs=34.9
Q ss_pred ccEE-EEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEEEEeCC--CCcEEEE
Q 044045 112 ATEI-LTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHFQRNVG--HGNAFSI 168 (215)
Q Consensus 112 a~E~-~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~~~N~g--~~~a~~l 168 (215)
..|+ ++.+.|++++.+. ++ ++.|..-|.+++|+|......... ..++++.
T Consensus 78 ~rE~~iV~l~G~~~V~vd-----G~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 78 RRELGVINIGGAGTITVD-----GQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TEEEEEEECSSCEEEEET-----TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred CcEEEEEEccCeEEEEEC-----CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 5676 5556899998875 44 679999999999999864444322 2345554
No 243
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=38.65 E-value=28 Score=27.73 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=28.0
Q ss_pred ccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCC
Q 044045 112 ATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGL 153 (215)
Q Consensus 112 a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~ 153 (215)
..-++|+++|++.+...+ ++ ...|.+||.+++-...
T Consensus 140 ~~~~v~~l~G~~~v~~~~----~~--~~~L~~~d~l~~~~~~ 175 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQG----QP--RGQLAAHDCLCAEGLQ 175 (200)
T ss_dssp SEEEEEESSSCEEEEETT----EE--EEEECTTCEEEEESCC
T ss_pred CEEEEEEccCcEEEEcCC----Cc--eeecCCCCEEEEeCCC
Confidence 467899999999986531 22 7899999999997653
No 244
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=36.72 E-value=7.4 Score=27.46 Aligned_cols=48 Identities=23% Similarity=0.284 Sum_probs=28.6
Q ss_pred EEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCe-eEEE--EEcCCCEE
Q 044045 96 IDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENR-LITK--VLKKGDVF 147 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~-~~~~--~L~~GDv~ 147 (215)
..+++|...-. -......+.+|++|++.+. ...+ ++ .... .+.+||++
T Consensus 32 ~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~-~~~~--g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVR-EGDPVNEMLFIIRGRLESV-TTDG--GRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEEC-TTSBCSEEEEEEECCCEEE-CCSS--CSSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEe-CCCCCCeEEEEEeeEEEEE-EcCC--CcceeeeeeeecCCCEe
Confidence 34556654322 1223578999999999964 3333 33 1123 88899976
No 245
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.59 E-value=57 Score=28.20 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=32.7
Q ss_pred EEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 96 IDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 96 ~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
..+++|..+-..-.+ +..+.+|++|++.+... ++.....+.+||++
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~-----~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEc-----CCeeEEEecCCCEE
Confidence 367888765332233 68899999999998763 22247889999977
No 246
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=33.02 E-value=48 Score=27.08 Aligned_cols=63 Identities=17% Similarity=0.167 Sum_probs=37.8
Q ss_pred EEEEEEcCCccCCCccCCCc------------cEEEEEEe------CEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCe
Q 044045 93 LARIDYAPWGVIPPHVHPRA------------TEILTVIE------GSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLA 154 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a------------~E~~~Vl~------G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~ 154 (215)
+-...+.+|+...+|+-.-. +=++|.-+ |+..+. +. ........++|++++||.+..
T Consensus 101 ~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~--~~---~~~~~V~P~~G~~v~F~s~~l 175 (243)
T 3dkq_A 101 PLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQ--DT---YGQQSIKLSAGSLVLYPSSSL 175 (243)
T ss_dssp EEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEE--ET---TEEEEECCCTTCEEEEETTSE
T ss_pred ceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEe--eC---CCcEEEecCCCEEEEECCCCe
Confidence 44556899999888864210 11122222 333332 11 112356779999999999999
Q ss_pred EEEEeC
Q 044045 155 HFQRNV 160 (215)
Q Consensus 155 H~~~N~ 160 (215)
|...-+
T Consensus 176 H~v~pV 181 (243)
T 3dkq_A 176 HQVTPV 181 (243)
T ss_dssp EEECCE
T ss_pred EcCccc
Confidence 998554
No 247
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=32.01 E-value=99 Score=30.03 Aligned_cols=55 Identities=18% Similarity=0.128 Sum_probs=37.7
Q ss_pred EEEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCC-CeeEEEEEcCCCEE
Q 044045 92 SLARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPE-NRLITKVLKKGDVF 147 (215)
Q Consensus 92 s~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~-~~~~~~~L~~GDv~ 147 (215)
.|....+++|..+=--=.+ ++.+.+|++|++.+.+..++++ .......+.+||.|
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred heEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 3555678888754222244 7899999999999988644321 23346789999987
No 248
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=31.23 E-value=2e+02 Score=22.88 Aligned_cols=146 Identities=13% Similarity=0.072 Sum_probs=79.1
Q ss_pred cccCCccccccccCCCCCCCCCCceEEEeecccC----CC--C--------CcCc-eEEEEEEEcCCc-cCCCccCCCcc
Q 044045 50 LAQANHFTFSGLHVAGNTSNPLGSRVTPVTVAQI----PG--L--------NTLG-ASLARIDYAPWG-VIPPHVHPRAT 113 (215)
Q Consensus 50 ~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~----P~--l--------~~~g-is~~~~~l~pgg-~~~pH~Hp~a~ 113 (215)
..+++++.=.+ +-. ..+.|+..++...... +. + ..+. .+....-|.++. ...+|.- +++
T Consensus 27 ~~~a~~lI~~L-~L~---PHPEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv-~sd 101 (203)
T 1xe7_A 27 PSSLQQLINDW-QLI---KHREGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKN-INR 101 (203)
T ss_dssp CHHHHHHHHHH-TCE---ECTTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEE-SSC
T ss_pred CCCHHHHHHHc-CCc---cCCCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceee-CCC
Confidence 44556654443 211 1467887877776532 11 0 0111 233333467775 4555554 489
Q ss_pred EEEEEEeCEEEEEEEecCCCCeeEEEEEcC----CC--EEEEcCCCeEEEEeC-CCCcE--EEEEEEcCCCCceeeechh
Q 044045 114 EILTVIEGSLDVGFVTSNPENRLITKVLKK----GD--VFVFPIGLAHFQRNV-GHGNA--FSISALSSQNPGVITIANA 184 (215)
Q Consensus 114 E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~----GD--v~~~P~G~~H~~~N~-g~~~a--~~l~~~~s~~pg~~~~~~~ 184 (215)
|+.+-..|.....+..++ ++..+.+|.+ |+ -++||+|.-...+.. +.+-. .+++..- -||+..-...
T Consensus 102 EiW~~h~G~p~~~li~~d--g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCtV--aPGFdF~dFe 177 (203)
T 1xe7_A 102 IIHILQRGKGQYVLVYPD--GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEVV--VPGFDFEDHT 177 (203)
T ss_dssp EEEEEEEECEEEEEECTT--SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEEE--SSCCCGGGEE
T ss_pred EEEEEEcCCccEEEEcCC--CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEEe--cCCccchhcE
Confidence 999999996555555554 5656677754 44 479999998887654 32221 3443322 3565433322
Q ss_pred hhcCCCCCCHH-HHHHHcCCCHHHHHhhh
Q 044045 185 VFGSNPSIADD-LLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 185 lf~~~p~~p~~-vl~~af~~~~~~v~~l~ 212 (215)
+ .+.+ -|.+.|. ++.++.|+
T Consensus 178 l------~~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 178 F------LKGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp E------CCHHHHHHHHHC--HHHHHHTG
T ss_pred e------cCCcHHHHHHCC--HHHHHHHH
Confidence 2 2344 4555554 66666654
No 249
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=30.03 E-value=50 Score=28.18 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=34.9
Q ss_pred EEEEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 93 LARIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 93 ~~~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
+....+++|..+--.-.+ +..+.+|++|++.+... ++ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~-----~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN-----GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET-----TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC-----Ce-EeeeCCCCCEE
Confidence 455678888766433334 68899999999998762 44 35679999987
No 250
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=29.33 E-value=82 Score=27.52 Aligned_cols=72 Identities=18% Similarity=0.110 Sum_probs=51.3
Q ss_pred EEEEcC---------CCEEEEcCCCeEEEEeCCCCcEEEEEEEcCCCCc-----------------------ee----ee
Q 044045 138 TKVLKK---------GDVFVFPIGLAHFQRNVGHGNAFSISALSSQNPG-----------------------VI----TI 181 (215)
Q Consensus 138 ~~~L~~---------GDv~~~P~G~~H~~~N~g~~~a~~l~~~~s~~pg-----------------------~~----~~ 181 (215)
..+|++ ||..+-|+-.+|.+.-.++.|+++++.-...+-. .. .+
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 567777 9999999999999999999999999754322210 00 00
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCHHHHHhh
Q 044045 182 ANAVFGSNPSIADDLLAKAFQLDKSVVGQL 211 (215)
Q Consensus 182 ~~~lf~~~p~~p~~vl~~af~~~~~~v~~l 211 (215)
...+-.. +++.+-|++..|++.+.+..+
T Consensus 236 R~ar~Re--glTQ~~LAe~TGIPq~hISeM 263 (443)
T 3g7d_A 236 DLFLARR--AHTRTSAAEAAGVPPADLEAA 263 (443)
T ss_dssp HHHHHHT--TCCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHhc--CCCHHHHHHHhCCCHHHHHHH
Confidence 1111122 588999999999999888665
No 251
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=29.33 E-value=56 Score=28.17 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=21.0
Q ss_pred eEEEEEcCCCEEEEcCCCeEEEE
Q 044045 136 LITKVLKKGDVFVFPIGLAHFQR 158 (215)
Q Consensus 136 ~~~~~L~~GDv~~~P~G~~H~~~ 158 (215)
.....+++||+++|...+.|.-.
T Consensus 233 ~~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 233 YEEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EEECCBCTTCEEEEETTCEEEEC
T ss_pred hccccCCCCcEEEEecceeecCC
Confidence 35789999999999999999987
No 252
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=27.26 E-value=1.4e+02 Score=25.12 Aligned_cols=65 Identities=12% Similarity=0.057 Sum_probs=42.7
Q ss_pred ceEEEEEEEcCCccCC-CccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEE-------EEeCC
Q 044045 90 GASLARIDYAPWGVIP-PHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHF-------QRNVG 161 (215)
Q Consensus 90 gis~~~~~l~pgg~~~-pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~-------~~N~g 161 (215)
|.....+.+.||.... .-.|+ -.|=+|+++|.+. .|+.++-|.|+.|. -+- .
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHd-y~EEvY~LeG~~d------------------~G~Y~~RPpg~~HGps~~~~ppf~-S 275 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQP-YNEEGYCLTGYCD------------------VGDYRIVKDHYWYCPSFSTLPRHI-T 275 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEEC-SCEEEEEEEEEEE------------------ETTEEEETTEEEEECTTEEECCEE-E
T ss_pred CCeEEEEEECCCCCCCCceeec-cceeEEEEeeecc------------------CceeeEcCCCCccCccccCCCCcC-c
Confidence 5556677788886544 23477 4666899999762 27888899999998 332 2
Q ss_pred CCcEEEEEEEcCC
Q 044045 162 HGNAFSISALSSQ 174 (215)
Q Consensus 162 ~~~a~~l~~~~s~ 174 (215)
+.-+.++.-.+.+
T Consensus 276 e~G~l~fvR~Dgd 288 (303)
T 2qdr_A 276 DDGGLFFVRVDRD 288 (303)
T ss_dssp SSCEEEEEEESSC
T ss_pred CCceEEEEEeCcc
Confidence 4556666544443
No 253
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=25.34 E-value=1e+02 Score=28.90 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=33.3
Q ss_pred EEEEcCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 95 RIDYAPWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 95 ~~~l~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
...+++|...-.. ...+..+.+|++|.+.+... ++.....+.+||++
T Consensus 58 ~~~~~kGe~I~~e-Gd~~~~lyiIlsG~V~v~~~-----g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLFNQ-GEEGTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEECT-TSBCCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred EEEECCCCEEECC-CCcCCeEEEEEEEEEEEEEe-----CCEEEEEeCCCCEe
Confidence 4567888765322 33367899999999998764 22356889999977
No 254
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=22.85 E-value=63 Score=18.36 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=17.2
Q ss_pred CCHHHHHHHcCCCHHHHHhhh
Q 044045 192 IADDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 192 ~p~~vl~~af~~~~~~v~~l~ 212 (215)
++++--.+.|+++.+++.+|.
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP 21 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLP 21 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCCCHHHHHHCc
Confidence 356777889999999998875
No 255
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=22.41 E-value=15 Score=20.51 Aligned_cols=11 Identities=45% Similarity=0.830 Sum_probs=8.4
Q ss_pred ccCCcccCCCc
Q 044045 39 RVNGFACMDPK 49 (215)
Q Consensus 39 ~~~g~~ck~p~ 49 (215)
.-|||-||.|-
T Consensus 23 vwngfdckspf 33 (36)
T 1iyc_A 23 VWNGFDCKSPF 33 (36)
T ss_dssp EEETTEEECGG
T ss_pred eecCccccCcc
Confidence 45899999763
No 256
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=22.21 E-value=96 Score=30.12 Aligned_cols=43 Identities=21% Similarity=0.273 Sum_probs=28.6
Q ss_pred cCCccCCCccCCCccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEE
Q 044045 99 APWGVIPPHVHPRATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVF 147 (215)
Q Consensus 99 ~pgg~~~pH~Hp~a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~ 147 (215)
..|..+--. -..++.+.+|++|++.+... ++....+|++||.|
T Consensus 367 kaGtvI~rQ-GE~gds~YIIlsG~V~V~~~-----~~~~v~~L~~Gd~F 409 (999)
T 4f7z_A 367 KGGTVLFNQ-GEEGTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 409 (999)
T ss_dssp STTCEEECT-TSBCCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred cCCCEEEeC-CCcCCeEEEEEeeEEEEEEc-----CCcceEEecCCCcc
Confidence 445443222 33368899999999988653 22236789999998
No 257
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=21.64 E-value=91 Score=28.19 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=36.0
Q ss_pred EEEEcCCccCCCccCCC-ccEEEEEEeCEEEEEEEecCCCCeeEEEEEcCCCEEEEcCCCeEE
Q 044045 95 RIDYAPWGVIPPHVHPR-ATEILTVIEGSLDVGFVTSNPENRLITKVLKKGDVFVFPIGLAHF 156 (215)
Q Consensus 95 ~~~l~pgg~~~pH~Hp~-a~E~~~Vl~G~~~~~~~~~~~~~~~~~~~L~~GDv~~~P~G~~H~ 156 (215)
|..+.|+.+.+|-+|.+ .+|+.+.+.|.... | ..-+.+|.+-+-|.+.+|-
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a---------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA---------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC-------------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc---------c--ccCcCCCceeccCCCcCCC
Confidence 55788899999877743 46899999988542 2 2358999999999999995
No 258
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=20.72 E-value=73 Score=18.31 Aligned_cols=21 Identities=10% Similarity=0.325 Sum_probs=18.5
Q ss_pred CCHHHHHHHcCCCHHHHHhhh
Q 044045 192 IADDLLAKAFQLDKSVVGQLQ 212 (215)
Q Consensus 192 ~p~~vl~~af~~~~~~v~~l~ 212 (215)
++++--.+.|+++.+++.+|+
T Consensus 3 Lsd~dF~~vFgmsr~eF~~LP 23 (37)
T 1und_A 3 LSEQDFVSVFGITRGQFAALP 23 (37)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCcCHHHHHHCh
Confidence 678888999999999999875
Done!